Query 016162
Match_columns 394
No_of_seqs 226 out of 2080
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 08:57:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 8.1E-71 2.8E-75 544.7 39.1 319 13-354 26-345 (345)
2 3k5p_A D-3-phosphoglycerate de 100.0 1.1E-68 3.9E-73 539.1 37.7 320 11-361 11-336 (416)
3 4e5n_A Thermostable phosphite 100.0 1.5E-68 5.3E-73 526.5 36.0 318 14-354 1-326 (330)
4 3kb6_A D-lactate dehydrogenase 100.0 1.9E-69 6.3E-74 533.7 29.1 310 16-354 1-328 (334)
5 4dgs_A Dehydrogenase; structur 100.0 8.3E-69 2.8E-73 529.3 30.3 314 12-354 27-340 (340)
6 1sc6_A PGDH, D-3-phosphoglycer 100.0 5.1E-68 1.8E-72 535.3 36.5 319 12-361 1-325 (404)
7 2yq5_A D-isomer specific 2-hyd 100.0 8.5E-67 2.9E-71 515.6 28.9 313 16-354 2-332 (343)
8 3hg7_A D-isomer specific 2-hyd 100.0 2.1E-66 7.3E-71 509.1 29.8 306 14-354 4-311 (324)
9 3gg9_A D-3-phosphoglycerate de 100.0 1.6E-65 5.6E-70 508.5 34.4 315 15-354 2-333 (352)
10 3evt_A Phosphoglycerate dehydr 100.0 6.6E-66 2.2E-70 506.1 26.9 307 15-354 1-311 (324)
11 2pi1_A D-lactate dehydrogenase 100.0 4E-66 1.4E-70 509.9 24.9 311 16-354 1-328 (334)
12 3jtm_A Formate dehydrogenase, 100.0 1.9E-65 6.5E-70 507.7 28.0 312 16-349 20-334 (351)
13 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 3.6E-64 1.2E-68 496.0 35.1 311 13-351 24-334 (335)
14 4hy3_A Phosphoglycerate oxidor 100.0 1.6E-64 5.6E-69 502.5 28.0 312 15-354 27-348 (365)
15 2cuk_A Glycerate dehydrogenase 100.0 5.6E-63 1.9E-67 483.4 37.0 309 16-353 1-310 (311)
16 1j4a_A D-LDH, D-lactate dehydr 100.0 3.7E-63 1.3E-67 489.0 33.1 313 16-354 2-331 (333)
17 1xdw_A NAD+-dependent (R)-2-hy 100.0 3.2E-63 1.1E-67 489.1 31.2 313 16-354 1-331 (331)
18 1gdh_A D-glycerate dehydrogena 100.0 3.8E-62 1.3E-66 479.3 38.3 312 16-350 2-315 (320)
19 1ygy_A PGDH, D-3-phosphoglycer 100.0 1.8E-62 6E-67 511.6 38.0 344 15-392 4-347 (529)
20 1dxy_A D-2-hydroxyisocaproate 100.0 1.6E-63 5.3E-68 491.6 27.0 312 16-354 1-329 (333)
21 1wwk_A Phosphoglycerate dehydr 100.0 2.1E-62 7.3E-67 478.6 34.5 305 14-346 2-307 (307)
22 2ekl_A D-3-phosphoglycerate de 100.0 2.4E-62 8.3E-67 479.4 34.9 306 14-349 4-312 (313)
23 2nac_A NAD-dependent formate d 100.0 8.1E-63 2.8E-67 494.7 31.8 317 17-354 42-366 (393)
24 2j6i_A Formate dehydrogenase; 100.0 4.3E-63 1.5E-67 493.7 25.9 319 14-354 16-345 (364)
25 3pp8_A Glyoxylate/hydroxypyruv 100.0 2.2E-62 7.7E-67 479.4 30.2 301 14-354 2-310 (315)
26 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.1E-61 3.7E-66 478.1 34.9 310 15-354 23-333 (333)
27 2gcg_A Glyoxylate reductase/hy 100.0 1.7E-60 5.8E-65 469.6 36.7 322 12-354 5-329 (330)
28 2dbq_A Glyoxylate reductase; D 100.0 1.3E-59 4.4E-64 464.1 36.1 317 15-354 2-322 (334)
29 2d0i_A Dehydrogenase; structur 100.0 5.9E-60 2E-64 466.2 33.7 312 15-354 2-318 (333)
30 2w2k_A D-mandelate dehydrogena 100.0 9E-60 3.1E-64 467.5 32.7 323 15-361 3-343 (348)
31 1mx3_A CTBP1, C-terminal bindi 100.0 1.2E-59 4.3E-64 465.7 32.0 318 13-354 19-343 (347)
32 1qp8_A Formate dehydrogenase; 100.0 1.2E-59 4E-64 458.3 25.9 292 16-354 1-296 (303)
33 3oet_A Erythronate-4-phosphate 100.0 5.1E-59 1.7E-63 464.1 27.8 281 14-349 2-286 (381)
34 3gvx_A Glycerate dehydrogenase 100.0 5.3E-57 1.8E-61 436.3 22.5 250 62-348 34-284 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 5.9E-56 2E-60 442.9 28.3 281 16-351 1-285 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 8E-38 2.7E-42 319.6 11.3 255 87-388 194-458 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 1.4E-38 4.7E-43 326.3 -1.5 255 83-388 212-473 (494)
38 3d4o_A Dipicolinate synthase s 100.0 5.6E-29 1.9E-33 240.7 14.0 214 15-276 5-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 4.8E-26 1.6E-30 220.7 12.1 221 14-276 6-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 2.3E-26 7.9E-31 236.4 2.9 253 89-388 214-473 (494)
41 2vhw_A Alanine dehydrogenase; 99.9 1.5E-22 5.1E-27 202.4 22.1 301 5-354 1-344 (377)
42 2eez_A Alanine dehydrogenase; 99.8 4.7E-19 1.6E-23 176.5 17.8 303 5-354 1-341 (369)
43 1gtm_A Glutamate dehydrogenase 99.8 6.2E-21 2.1E-25 192.6 3.9 154 160-345 206-386 (419)
44 3h9u_A Adenosylhomocysteinase; 99.8 1.8E-17 6.2E-22 166.8 20.7 156 93-285 155-312 (436)
45 1x13_A NAD(P) transhydrogenase 99.7 3.1E-17 1.1E-21 165.1 15.2 229 28-279 28-301 (401)
46 1l7d_A Nicotinamide nucleotide 99.7 1.3E-16 4.4E-21 159.7 16.1 258 5-277 1-301 (384)
47 3n58_A Adenosylhomocysteinase; 99.7 8.2E-17 2.8E-21 162.0 12.6 156 92-284 190-347 (464)
48 3gvp_A Adenosylhomocysteinase 99.7 2E-15 6.8E-20 151.7 17.9 154 93-283 164-319 (435)
49 1gpj_A Glutamyl-tRNA reductase 99.7 8.9E-18 3.1E-22 169.2 0.1 217 88-350 83-328 (404)
50 3doj_A AT3G25530, dehydrogenas 99.3 1.8E-12 6.2E-17 125.7 8.8 119 159-292 15-135 (310)
51 3obb_A Probable 3-hydroxyisobu 99.3 1.8E-12 6.2E-17 125.4 8.5 115 166-297 4-120 (300)
52 3p2y_A Alanine dehydrogenase/p 99.3 1.9E-10 6.6E-15 114.2 21.3 249 10-277 17-309 (381)
53 4gbj_A 6-phosphogluconate dehy 99.3 3.8E-12 1.3E-16 123.0 8.1 114 166-294 6-119 (297)
54 4dll_A 2-hydroxy-3-oxopropiona 99.3 8E-12 2.7E-16 121.7 10.0 118 162-294 28-146 (320)
55 3qsg_A NAD-binding phosphogluc 99.3 2.3E-11 8E-16 118.0 13.2 131 142-289 2-134 (312)
56 3l6d_A Putative oxidoreductase 99.3 5E-12 1.7E-16 122.4 8.4 117 161-292 5-121 (306)
57 3ggo_A Prephenate dehydrogenas 99.3 4.2E-11 1.4E-15 116.5 14.7 153 162-332 30-189 (314)
58 1c1d_A L-phenylalanine dehydro 99.2 2.2E-11 7.5E-16 120.2 10.9 108 162-292 172-280 (355)
59 2g5c_A Prephenate dehydrogenas 99.2 6.2E-11 2.1E-15 112.6 13.1 142 166-324 2-150 (281)
60 4e21_A 6-phosphogluconate dehy 99.2 3.9E-11 1.3E-15 118.8 11.3 122 163-301 20-144 (358)
61 4e12_A Diketoreductase; oxidor 99.2 3.1E-10 1.1E-14 108.4 16.9 154 166-332 5-170 (283)
62 3qha_A Putative oxidoreductase 99.2 2.3E-11 7.8E-16 117.1 7.6 119 165-300 15-133 (296)
63 3pef_A 6-phosphogluconate dehy 99.2 3E-11 1E-15 115.5 8.1 112 166-292 2-115 (287)
64 2d5c_A AROE, shikimate 5-dehyd 99.2 6E-11 2E-15 112.2 9.9 196 30-289 21-221 (263)
65 4gwg_A 6-phosphogluconate dehy 99.2 1.7E-10 5.9E-15 118.4 12.7 125 165-300 4-131 (484)
66 4ezb_A Uncharacterized conserv 99.2 9.7E-11 3.3E-15 114.0 10.3 114 165-292 24-141 (317)
67 3pdu_A 3-hydroxyisobutyrate de 99.1 3E-11 1E-15 115.4 6.5 112 166-292 2-115 (287)
68 3g0o_A 3-hydroxyisobutyrate de 99.1 3.8E-11 1.3E-15 115.8 6.4 113 165-292 7-122 (303)
69 2pv7_A T-protein [includes: ch 99.1 1.1E-10 3.6E-15 112.6 9.3 119 165-321 21-142 (298)
70 3dtt_A NADP oxidoreductase; st 99.1 6.1E-11 2.1E-15 111.0 7.0 109 149-273 3-125 (245)
71 1np3_A Ketol-acid reductoisome 99.1 5.8E-11 2E-15 116.6 7.1 136 161-322 12-155 (338)
72 2h78_A Hibadh, 3-hydroxyisobut 99.1 1.1E-10 3.6E-15 112.3 8.8 111 166-291 4-116 (302)
73 3ond_A Adenosylhomocysteinase; 99.1 1.5E-10 5.1E-15 118.2 10.2 147 92-275 208-355 (488)
74 2hk9_A Shikimate dehydrogenase 99.1 1.9E-10 6.5E-15 109.7 9.0 204 11-273 9-222 (275)
75 3b1f_A Putative prephenate deh 99.1 6.5E-10 2.2E-14 106.0 11.1 144 165-324 6-158 (290)
76 4dio_A NAD(P) transhydrogenase 99.0 4.5E-10 1.6E-14 112.4 9.2 232 29-278 47-320 (405)
77 3ktd_A Prephenate dehydrogenas 99.0 5.3E-10 1.8E-14 110.0 7.4 132 165-321 8-153 (341)
78 1vpd_A Tartronate semialdehyde 99.0 1.1E-09 3.8E-14 104.7 8.9 109 166-289 6-116 (299)
79 3cky_A 2-hydroxymethyl glutara 99.0 1.2E-09 4E-14 104.6 9.1 109 166-289 5-115 (301)
80 2zyd_A 6-phosphogluconate dehy 99.0 3.1E-09 1.1E-13 109.1 12.9 119 162-292 12-133 (480)
81 2dpo_A L-gulonate 3-dehydrogen 99.0 1.5E-08 5E-13 98.8 16.4 156 165-332 6-172 (319)
82 2f1k_A Prephenate dehydrogenas 98.9 6.7E-09 2.3E-13 98.3 12.5 144 166-329 1-148 (279)
83 2gf2_A Hibadh, 3-hydroxyisobut 98.9 1.4E-09 4.8E-14 103.8 7.6 108 166-288 1-110 (296)
84 1zej_A HBD-9, 3-hydroxyacyl-CO 98.9 1.3E-08 4.4E-13 98.0 13.9 146 163-332 10-156 (293)
85 2p4q_A 6-phosphogluconate dehy 98.9 7.2E-09 2.5E-13 106.8 12.7 117 165-292 10-129 (497)
86 3k6j_A Protein F01G10.3, confi 98.9 3.4E-08 1.1E-12 100.6 17.3 154 166-333 55-216 (460)
87 1yb4_A Tartronic semialdehyde 98.9 1.3E-09 4.5E-14 103.8 6.4 108 166-289 4-113 (295)
88 2uyy_A N-PAC protein; long-cha 98.9 3.1E-09 1.1E-13 102.6 8.2 109 166-289 31-141 (316)
89 2iz1_A 6-phosphogluconate dehy 98.9 1.1E-08 3.8E-13 104.8 12.3 116 166-293 6-124 (474)
90 2cvz_A Dehydrogenase, 3-hydrox 98.9 5.8E-09 2E-13 98.9 9.5 106 166-289 2-107 (289)
91 1leh_A Leucine dehydrogenase; 98.8 7.8E-09 2.7E-13 102.4 9.7 108 162-291 170-278 (364)
92 2pgd_A 6-phosphogluconate dehy 98.8 1.3E-08 4.3E-13 104.6 11.5 118 166-294 3-123 (482)
93 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.8 1.8E-08 6.2E-13 103.3 12.5 125 166-298 2-129 (478)
94 2q3e_A UDP-glucose 6-dehydroge 98.8 1.8E-08 6.1E-13 103.1 11.7 147 166-317 6-181 (467)
95 1i36_A Conserved hypothetical 98.8 1.2E-08 4.2E-13 95.7 8.4 102 166-288 1-104 (264)
96 3fr7_A Putative ketol-acid red 98.8 4.6E-09 1.6E-13 106.8 5.8 124 161-303 49-180 (525)
97 1pjc_A Protein (L-alanine dehy 98.8 2.5E-07 8.4E-12 91.5 17.9 241 5-273 1-268 (361)
98 2yjz_A Metalloreductase steap4 98.2 8.3E-10 2.8E-14 100.6 0.0 94 163-277 17-110 (201)
99 1f0y_A HCDH, L-3-hydroxyacyl-C 98.7 3E-07 1E-11 88.2 16.9 155 166-332 16-185 (302)
100 3d1l_A Putative NADP oxidoredu 98.7 1.9E-08 6.4E-13 94.6 8.2 102 161-278 6-108 (266)
101 3oj0_A Glutr, glutamyl-tRNA re 98.7 4.9E-08 1.7E-12 83.4 10.0 93 165-275 21-113 (144)
102 3pid_A UDP-glucose 6-dehydroge 98.6 1.5E-07 5E-12 95.2 11.4 124 159-289 30-170 (432)
103 4a5o_A Bifunctional protein fo 98.6 1.4E-06 4.7E-11 83.0 16.9 171 31-276 58-237 (286)
104 3gt0_A Pyrroline-5-carboxylate 98.6 1.2E-07 4E-12 88.5 9.3 105 166-288 3-111 (247)
105 3mog_A Probable 3-hydroxybutyr 98.6 4.9E-07 1.7E-11 92.8 14.4 153 165-332 5-169 (483)
106 3p2o_A Bifunctional protein fo 98.6 1.3E-06 4.5E-11 83.2 16.4 171 32-276 57-236 (285)
107 2i99_A MU-crystallin homolog; 98.6 1.8E-07 6.1E-12 90.6 10.6 116 163-298 133-249 (312)
108 2vns_A Metalloreductase steap3 98.6 7.7E-08 2.6E-12 88.1 7.2 95 164-278 27-121 (215)
109 3c24_A Putative oxidoreductase 98.6 1.1E-07 3.6E-12 90.6 8.1 93 166-276 12-105 (286)
110 2ahr_A Putative pyrroline carb 98.6 4.3E-07 1.5E-11 84.9 11.9 102 166-289 4-105 (259)
111 3l07_A Bifunctional protein fo 98.6 2.4E-06 8.1E-11 81.4 17.0 170 32-276 58-237 (285)
112 1a4i_A Methylenetetrahydrofola 98.5 2E-06 6.7E-11 82.6 16.5 168 33-276 60-241 (301)
113 2raf_A Putative dinucleotide-b 98.5 1.2E-07 4.2E-12 86.4 7.8 80 161-276 15-94 (209)
114 2c2x_A Methylenetetrahydrofola 98.5 1.9E-06 6.6E-11 81.8 16.2 166 33-276 57-236 (281)
115 2izz_A Pyrroline-5-carboxylate 98.5 4.1E-07 1.4E-11 88.3 11.7 108 163-288 20-132 (322)
116 1mv8_A GMD, GDP-mannose 6-dehy 98.5 5.3E-07 1.8E-11 91.2 13.0 119 166-288 1-140 (436)
117 4a26_A Putative C-1-tetrahydro 98.5 1.7E-06 5.7E-11 83.1 15.3 173 31-276 60-243 (300)
118 3gg2_A Sugar dehydrogenase, UD 98.5 5.4E-07 1.8E-11 91.7 12.5 119 166-288 3-138 (450)
119 4a7p_A UDP-glucose dehydrogena 98.5 7.1E-07 2.4E-11 90.7 11.4 112 166-289 9-146 (446)
120 3tri_A Pyrroline-5-carboxylate 98.4 3.1E-07 1.1E-11 87.5 8.1 106 165-288 3-112 (280)
121 1yqg_A Pyrroline-5-carboxylate 98.4 4.7E-07 1.6E-11 84.7 7.7 102 166-289 1-103 (263)
122 1bg6_A N-(1-D-carboxylethyl)-L 98.4 1.4E-06 4.9E-11 84.8 10.9 118 166-288 5-124 (359)
123 1wdk_A Fatty oxidation complex 98.4 3E-06 1E-10 91.0 14.2 155 165-332 314-478 (715)
124 3k96_A Glycerol-3-phosphate de 98.4 2.4E-06 8.4E-11 84.2 12.4 110 165-279 29-140 (356)
125 1jay_A Coenzyme F420H2:NADP+ o 98.3 2.5E-06 8.5E-11 77.0 10.8 124 166-304 1-137 (212)
126 2o3j_A UDP-glucose 6-dehydroge 98.3 2.8E-06 9.6E-11 87.1 12.1 119 166-288 10-151 (481)
127 1dlj_A UDP-glucose dehydrogena 98.3 2.7E-06 9.3E-11 85.2 11.7 111 166-289 1-134 (402)
128 1zcj_A Peroxisomal bifunctiona 98.3 7.1E-06 2.4E-10 83.7 14.9 153 165-331 37-198 (463)
129 1b0a_A Protein (fold bifunctio 98.3 1.5E-06 5E-11 83.0 8.9 169 33-276 58-235 (288)
130 1txg_A Glycerol-3-phosphate de 98.3 2.3E-06 7.9E-11 82.6 10.5 110 166-288 1-124 (335)
131 2rcy_A Pyrroline carboxylate r 98.3 1.9E-06 6.6E-11 80.4 9.4 99 165-289 4-106 (262)
132 2wtb_A MFP2, fatty acid multif 98.3 5.9E-06 2E-10 88.8 13.9 154 166-332 313-476 (725)
133 1edz_A 5,10-methylenetetrahydr 98.3 1.1E-06 3.8E-11 85.2 7.3 98 159-274 171-277 (320)
134 3don_A Shikimate dehydrogenase 98.3 1.4E-06 4.7E-11 83.1 7.8 108 162-288 114-224 (277)
135 3ngx_A Bifunctional protein fo 98.3 2.3E-06 7.8E-11 81.2 9.0 165 33-275 52-225 (276)
136 2y0c_A BCEC, UDP-glucose dehyd 98.3 5.8E-06 2E-10 84.7 12.6 120 165-288 8-144 (478)
137 1x0v_A GPD-C, GPDH-C, glycerol 98.2 2.9E-06 9.8E-11 82.8 9.6 107 165-276 8-128 (354)
138 3u62_A Shikimate dehydrogenase 98.2 4.3E-06 1.5E-10 78.6 10.3 106 163-289 107-214 (253)
139 1evy_A Glycerol-3-phosphate de 98.2 1.2E-06 4.2E-11 86.1 6.7 107 167-277 17-129 (366)
140 3g79_A NDP-N-acetyl-D-galactos 98.2 3E-06 1E-10 86.8 9.1 112 166-284 19-159 (478)
141 3ojo_A CAP5O; rossmann fold, c 98.2 4.6E-06 1.6E-10 84.3 10.3 111 163-287 9-144 (431)
142 3ado_A Lambda-crystallin; L-gu 98.2 2.1E-05 7E-10 76.4 14.3 150 164-322 5-165 (319)
143 1y81_A Conserved hypothetical 98.2 2.2E-06 7.6E-11 73.2 6.2 104 162-292 11-118 (138)
144 2egg_A AROE, shikimate 5-dehyd 98.2 1E-05 3.5E-10 77.8 11.4 114 162-289 138-255 (297)
145 4huj_A Uncharacterized protein 98.2 3.1E-06 1.1E-10 77.5 7.2 93 165-275 23-116 (220)
146 1yj8_A Glycerol-3-phosphate de 98.1 3.9E-06 1.3E-10 82.9 8.3 105 166-275 22-144 (375)
147 2dc1_A L-aspartate dehydrogena 98.1 5.3E-06 1.8E-10 76.7 8.6 96 167-290 2-102 (236)
148 1z82_A Glycerol-3-phosphate de 98.1 4.6E-06 1.6E-10 81.1 8.2 106 165-287 14-127 (335)
149 1ks9_A KPA reductase;, 2-dehyd 98.1 2.9E-06 9.9E-11 80.0 6.5 97 166-275 1-100 (291)
150 3hdj_A Probable ornithine cycl 98.1 1.6E-05 5.4E-10 77.0 11.7 97 164-276 120-217 (313)
151 3dfu_A Uncharacterized protein 98.1 8.1E-06 2.8E-10 75.8 9.2 70 165-272 6-75 (232)
152 1x7d_A Ornithine cyclodeaminas 98.1 1.5E-05 5.3E-10 78.3 11.2 100 164-274 128-228 (350)
153 3c85_A Putative glutathione-re 98.1 3.7E-06 1.2E-10 74.3 6.0 100 161-273 35-140 (183)
154 2ew2_A 2-dehydropantoate 2-red 98.1 5.7E-06 2E-10 78.7 7.8 117 166-289 4-124 (316)
155 2duw_A Putative COA-binding pr 98.0 3.1E-06 1.1E-10 72.8 4.1 105 165-294 13-121 (145)
156 2z2v_A Hypothetical protein PH 98.0 5.1E-06 1.8E-10 82.2 6.0 114 162-291 13-126 (365)
157 1vl6_A Malate oxidoreductase; 97.9 4E-05 1.4E-09 76.0 10.9 160 160-344 187-360 (388)
158 2i76_A Hypothetical protein; N 97.9 3E-06 1E-10 80.2 2.5 89 166-276 3-93 (276)
159 2g1u_A Hypothetical protein TM 97.9 6.6E-05 2.3E-09 64.5 10.8 104 159-275 13-121 (155)
160 1lss_A TRK system potassium up 97.9 6.5E-05 2.2E-09 62.4 10.1 95 165-271 4-102 (140)
161 1omo_A Alanine dehydrogenase; 97.9 5E-05 1.7E-09 73.7 10.6 95 164-274 124-219 (322)
162 3phh_A Shikimate dehydrogenase 97.9 3E-05 1E-09 73.5 8.2 94 165-275 118-212 (269)
163 3ghy_A Ketopantoate reductase 97.8 2E-05 6.7E-10 76.7 6.7 103 165-274 3-106 (335)
164 2qrj_A Saccharopine dehydrogen 97.8 1.5E-05 5.1E-10 79.3 5.8 83 164-272 213-300 (394)
165 3ulk_A Ketol-acid reductoisome 97.8 6.9E-05 2.4E-09 75.1 10.1 100 161-275 33-134 (491)
166 2qyt_A 2-dehydropantoate 2-red 97.8 2.6E-05 8.7E-10 74.5 6.5 116 166-288 9-132 (317)
167 3fwz_A Inner membrane protein 97.8 6.7E-05 2.3E-09 63.4 8.3 96 165-273 7-106 (140)
168 3i83_A 2-dehydropantoate 2-red 97.8 4.5E-05 1.6E-09 73.6 8.0 119 166-292 3-124 (320)
169 3c7a_A Octopine dehydrogenase; 97.7 0.00012 4.2E-09 72.7 10.8 103 166-271 3-115 (404)
170 3hwr_A 2-dehydropantoate 2-red 97.7 6.8E-05 2.3E-09 72.4 8.4 116 163-286 17-133 (318)
171 3ic5_A Putative saccharopine d 97.7 4.9E-05 1.7E-09 61.2 6.3 94 164-272 4-100 (118)
172 3vtf_A UDP-glucose 6-dehydroge 97.7 0.00029 9.8E-09 71.3 12.7 145 164-316 20-193 (444)
173 2hmt_A YUAA protein; RCK, KTN, 97.7 0.00018 6.3E-09 59.8 9.6 100 163-275 4-107 (144)
174 3pwz_A Shikimate dehydrogenase 97.7 0.00014 4.8E-09 69.0 9.8 75 161-247 116-192 (272)
175 3o8q_A Shikimate 5-dehydrogena 97.6 5.9E-05 2E-09 71.9 6.5 100 161-274 122-223 (281)
176 3uuw_A Putative oxidoreductase 97.6 0.00027 9.2E-09 67.5 11.1 109 165-291 6-118 (308)
177 2a9f_A Putative malic enzyme ( 97.6 0.00013 4.6E-09 72.3 8.9 190 108-346 155-358 (398)
178 1p77_A Shikimate 5-dehydrogena 97.6 0.00012 4E-09 69.3 7.9 76 162-248 116-192 (272)
179 1nyt_A Shikimate 5-dehydrogena 97.6 0.00032 1.1E-08 66.2 10.8 99 162-275 116-217 (271)
180 3jyo_A Quinate/shikimate dehyd 97.6 0.00079 2.7E-08 64.1 13.2 80 162-246 124-204 (283)
181 3hn2_A 2-dehydropantoate 2-red 97.6 0.00018 6.1E-09 69.1 8.8 120 166-294 3-124 (312)
182 3tnl_A Shikimate dehydrogenase 97.6 0.00053 1.8E-08 66.3 12.1 81 161-247 150-237 (315)
183 3llv_A Exopolyphosphatase-rela 97.5 0.00022 7.5E-09 59.8 8.1 72 164-246 5-80 (141)
184 2ho3_A Oxidoreductase, GFO/IDH 97.5 0.00042 1.4E-08 66.7 10.5 68 167-246 3-72 (325)
185 4b4u_A Bifunctional protein fo 97.5 0.0003 1E-08 67.3 9.1 168 31-273 76-252 (303)
186 4hkt_A Inositol 2-dehydrogenas 97.5 0.00063 2.2E-08 65.6 11.3 69 166-248 4-75 (331)
187 3euw_A MYO-inositol dehydrogen 97.4 0.00041 1.4E-08 67.3 9.5 108 166-291 5-117 (344)
188 3fbt_A Chorismate mutase and s 97.4 0.00058 2E-08 65.1 10.3 70 161-246 118-188 (282)
189 2dvm_A Malic enzyme, 439AA lon 97.4 0.00025 8.4E-09 71.7 7.8 118 160-290 181-312 (439)
190 3zwc_A Peroxisomal bifunctiona 97.4 0.0011 3.9E-08 71.1 13.2 147 166-322 317-471 (742)
191 1tlt_A Putative oxidoreductase 97.4 0.00067 2.3E-08 65.1 10.3 109 166-292 6-118 (319)
192 3t4e_A Quinate/shikimate dehyd 97.4 0.0011 3.7E-08 64.1 11.5 81 161-247 144-231 (312)
193 3c1a_A Putative oxidoreductase 97.4 0.00033 1.1E-08 67.2 7.8 106 166-291 11-121 (315)
194 1id1_A Putative potassium chan 97.4 0.00076 2.6E-08 57.5 9.3 100 165-273 3-106 (153)
195 2ewd_A Lactate dehydrogenase,; 97.4 0.00038 1.3E-08 67.1 8.2 118 165-286 4-135 (317)
196 3q2i_A Dehydrogenase; rossmann 97.4 0.00063 2.1E-08 66.3 9.8 70 165-247 13-86 (354)
197 1guz_A Malate dehydrogenase; o 97.4 0.00033 1.1E-08 67.4 7.7 78 166-246 1-79 (310)
198 1iuk_A Hypothetical protein TT 97.3 0.00049 1.7E-08 58.6 7.5 104 164-292 12-119 (140)
199 1pzg_A LDH, lactate dehydrogen 97.3 0.0011 3.6E-08 64.6 10.7 106 165-273 9-133 (331)
200 3cea_A MYO-inositol 2-dehydrog 97.3 0.00096 3.3E-08 64.5 10.1 110 166-292 9-125 (346)
201 2v6b_A L-LDH, L-lactate dehydr 97.3 0.00044 1.5E-08 66.4 7.4 121 166-294 1-138 (304)
202 3bio_A Oxidoreductase, GFO/IDH 97.3 0.00037 1.3E-08 66.9 6.9 104 166-290 10-117 (304)
203 2glx_A 1,5-anhydro-D-fructose 97.3 0.001 3.5E-08 63.9 10.0 107 167-291 2-114 (332)
204 3dfz_A SIRC, precorrin-2 dehyd 97.3 0.00061 2.1E-08 62.7 7.8 98 159-273 25-122 (223)
205 1hyh_A L-hicdh, L-2-hydroxyiso 97.2 0.0016 5.3E-08 62.5 10.8 76 166-246 2-79 (309)
206 4fgw_A Glycerol-3-phosphate de 97.2 0.00073 2.5E-08 67.3 8.6 105 167-275 36-154 (391)
207 2d59_A Hypothetical protein PH 97.2 0.00069 2.4E-08 57.9 7.4 103 165-294 22-128 (144)
208 1nvt_A Shikimate 5'-dehydrogen 97.2 0.00072 2.5E-08 64.2 8.2 105 162-274 125-232 (287)
209 3evn_A Oxidoreductase, GFO/IDH 97.2 0.0012 4E-08 63.7 9.7 70 166-247 6-78 (329)
210 3db2_A Putative NADPH-dependen 97.2 0.0014 4.6E-08 63.9 10.2 70 166-249 6-79 (354)
211 1xea_A Oxidoreductase, GFO/IDH 97.2 0.0013 4.5E-08 63.1 10.0 110 166-292 3-116 (323)
212 3e9m_A Oxidoreductase, GFO/IDH 97.2 0.0015 5.2E-08 63.0 10.4 70 166-247 6-78 (330)
213 3ezy_A Dehydrogenase; structur 97.1 0.0025 8.6E-08 61.7 11.0 70 166-247 3-75 (344)
214 3g17_A Similar to 2-dehydropan 97.1 0.00013 4.3E-09 69.6 1.6 98 166-277 3-101 (294)
215 3rc1_A Sugar 3-ketoreductase; 97.1 0.0018 6.3E-08 63.1 9.9 71 164-247 26-100 (350)
216 3l4b_C TRKA K+ channel protien 97.1 0.0015 5.3E-08 59.0 8.5 96 166-273 1-100 (218)
217 3e82_A Putative oxidoreductase 97.0 0.0026 8.8E-08 62.4 10.5 105 166-291 8-119 (364)
218 1a5z_A L-lactate dehydrogenase 97.0 0.0014 4.6E-08 63.4 8.3 103 166-275 1-119 (319)
219 1ydw_A AX110P-like protein; st 97.0 0.0042 1.4E-07 60.6 11.9 114 166-293 7-125 (362)
220 3fef_A Putative glucosidase LP 97.0 0.002 6.9E-08 65.2 9.3 116 164-285 4-159 (450)
221 1t2d_A LDH-P, L-lactate dehydr 97.0 0.0024 8.1E-08 61.9 9.4 79 166-248 5-86 (322)
222 2hjr_A Malate dehydrogenase; m 97.0 0.0026 9E-08 61.7 9.6 104 166-273 15-132 (328)
223 2axq_A Saccharopine dehydrogen 97.0 0.0014 4.9E-08 66.7 8.0 101 159-272 17-119 (467)
224 3ego_A Probable 2-dehydropanto 96.9 0.0014 4.7E-08 62.9 7.3 115 166-291 3-117 (307)
225 3abi_A Putative uncharacterize 96.9 0.0013 4.4E-08 64.6 7.0 72 165-246 16-87 (365)
226 1ldn_A L-lactate dehydrogenase 96.9 0.0028 9.6E-08 61.1 9.3 105 165-273 6-124 (316)
227 3e18_A Oxidoreductase; dehydro 96.9 0.0016 5.6E-08 63.6 7.4 67 166-247 6-76 (359)
228 1f06_A MESO-diaminopimelate D- 96.9 0.0014 4.8E-08 63.3 6.6 103 166-290 4-110 (320)
229 3mz0_A Inositol 2-dehydrogenas 96.9 0.0026 8.9E-08 61.6 8.6 71 166-247 3-77 (344)
230 3ohs_X Trans-1,2-dihydrobenzen 96.9 0.0054 1.8E-07 59.1 10.7 69 166-247 3-77 (334)
231 1obb_A Maltase, alpha-glucosid 96.8 0.0025 8.6E-08 65.1 8.7 128 165-295 3-174 (480)
232 3kux_A Putative oxidoreductase 96.8 0.0038 1.3E-07 60.7 9.1 68 166-249 8-80 (352)
233 1pvv_A Otcase, ornithine carba 96.8 0.24 8.3E-06 47.6 21.6 104 162-272 152-271 (315)
234 3m2t_A Probable dehydrogenase; 96.8 0.0025 8.6E-08 62.3 7.7 67 166-245 6-77 (359)
235 1jw9_B Molybdopterin biosynthe 96.7 0.0026 9.1E-08 59.2 7.3 101 161-271 27-152 (249)
236 3l9w_A Glutathione-regulated p 96.7 0.0044 1.5E-07 62.1 9.4 96 165-273 4-103 (413)
237 1h6d_A Precursor form of gluco 96.7 0.0029 9.9E-08 63.6 8.0 112 166-290 84-201 (433)
238 1j5p_A Aspartate dehydrogenase 96.7 0.0033 1.1E-07 58.8 7.8 99 163-290 10-112 (253)
239 3f4l_A Putative oxidoreductase 96.7 0.0015 5.3E-08 63.3 5.8 69 166-247 3-76 (345)
240 3aog_A Glutamate dehydrogenase 96.7 0.014 4.8E-07 58.7 12.8 116 161-291 231-357 (440)
241 3qy9_A DHPR, dihydrodipicolina 96.7 0.0026 9E-08 59.2 6.9 82 166-275 4-86 (243)
242 2aef_A Calcium-gated potassium 96.7 0.0041 1.4E-07 56.7 8.0 91 165-270 9-103 (234)
243 3r7f_A Aspartate carbamoyltran 96.7 0.065 2.2E-06 51.3 16.6 93 162-272 144-250 (304)
244 3ec7_A Putative dehydrogenase; 96.7 0.0041 1.4E-07 60.7 8.4 72 165-247 23-98 (357)
245 1oju_A MDH, malate dehydrogena 96.7 0.0054 1.8E-07 58.7 9.0 126 166-297 1-147 (294)
246 1lld_A L-lactate dehydrogenase 96.7 0.012 4.1E-07 56.2 11.5 106 164-275 6-127 (319)
247 3q2o_A Phosphoribosylaminoimid 96.7 0.0038 1.3E-07 61.5 8.2 39 161-200 10-48 (389)
248 1duv_G Octase-1, ornithine tra 96.7 0.16 5.4E-06 49.3 19.3 107 162-272 152-274 (333)
249 3vku_A L-LDH, L-lactate dehydr 96.6 0.0067 2.3E-07 58.9 9.1 106 164-279 8-130 (326)
250 2p2s_A Putative oxidoreductase 96.6 0.0074 2.5E-07 58.1 9.3 107 166-290 5-117 (336)
251 1y6j_A L-lactate dehydrogenase 96.6 0.0032 1.1E-07 60.8 6.7 121 165-294 7-147 (318)
252 2nu8_A Succinyl-COA ligase [AD 96.5 0.0067 2.3E-07 57.7 8.7 105 165-291 7-116 (288)
253 2i6u_A Otcase, ornithine carba 96.5 0.063 2.2E-06 51.5 15.6 104 162-272 145-265 (307)
254 1ez4_A Lactate dehydrogenase; 96.5 0.0035 1.2E-07 60.6 6.7 102 166-273 6-122 (318)
255 3d0o_A L-LDH 1, L-lactate dehy 96.5 0.0031 1.1E-07 60.8 6.3 106 164-273 5-124 (317)
256 1npy_A Hypothetical shikimate 96.5 0.0079 2.7E-07 56.7 8.8 68 164-247 118-186 (271)
257 2tmg_A Protein (glutamate dehy 96.5 0.042 1.4E-06 54.9 14.4 117 160-291 204-332 (415)
258 4had_A Probable oxidoreductase 96.5 0.009 3.1E-07 57.7 9.5 70 166-247 24-97 (350)
259 1pg5_A Aspartate carbamoyltran 96.5 0.053 1.8E-06 51.9 14.6 100 162-272 146-260 (299)
260 2zqz_A L-LDH, L-lactate dehydr 96.5 0.0033 1.1E-07 61.0 6.1 103 165-273 9-126 (326)
261 1ff9_A Saccharopine reductase; 96.5 0.0039 1.3E-07 63.2 6.8 75 164-247 2-79 (450)
262 3tl2_A Malate dehydrogenase; c 96.4 0.013 4.3E-07 56.6 9.9 107 164-273 7-128 (315)
263 1u8x_X Maltose-6'-phosphate gl 96.4 0.0076 2.6E-07 61.4 8.6 126 165-294 28-193 (472)
264 3pqe_A L-LDH, L-lactate dehydr 96.4 0.0074 2.5E-07 58.6 8.1 104 165-273 5-123 (326)
265 1ur5_A Malate dehydrogenase; o 96.4 0.0072 2.5E-07 58.0 7.8 103 166-273 3-120 (309)
266 1vlv_A Otcase, ornithine carba 96.4 0.095 3.3E-06 50.6 15.6 104 162-272 164-285 (325)
267 2i6t_A Ubiquitin-conjugating e 96.3 0.0035 1.2E-07 60.2 5.5 99 165-273 14-126 (303)
268 4a7p_A UDP-glucose dehydrogena 96.3 0.013 4.4E-07 59.2 9.8 103 160-282 317-430 (446)
269 1dxh_A Ornithine carbamoyltran 96.3 0.039 1.3E-06 53.6 12.8 107 162-272 152-274 (335)
270 3gvi_A Malate dehydrogenase; N 96.3 0.0091 3.1E-07 57.9 8.3 107 163-273 5-125 (324)
271 2vt3_A REX, redox-sensing tran 96.2 0.0027 9.4E-08 58.0 3.9 68 166-246 86-155 (215)
272 3v5n_A Oxidoreductase; structu 96.2 0.027 9.4E-07 56.1 11.4 73 166-248 38-122 (417)
273 4f3y_A DHPR, dihydrodipicolina 96.2 0.0079 2.7E-07 56.9 6.9 97 166-274 8-106 (272)
274 4fb5_A Probable oxidoreductase 96.2 0.012 4E-07 57.3 8.4 71 164-247 24-105 (393)
275 3ldh_A Lactate dehydrogenase; 96.2 0.008 2.7E-07 58.4 7.0 105 164-273 20-139 (330)
276 3nep_X Malate dehydrogenase; h 96.2 0.019 6.3E-07 55.4 9.5 104 166-273 1-119 (314)
277 2ef0_A Ornithine carbamoyltran 96.1 0.072 2.4E-06 51.0 13.4 104 162-278 151-270 (301)
278 1pjq_A CYSG, siroheme synthase 96.1 0.006 2.1E-07 61.8 6.2 78 159-249 6-84 (457)
279 1s6y_A 6-phospho-beta-glucosid 96.1 0.018 6.3E-07 58.2 9.7 126 165-294 7-174 (450)
280 3gdo_A Uncharacterized oxidore 96.1 0.0082 2.8E-07 58.5 6.9 68 166-249 6-78 (358)
281 3rui_A Ubiquitin-like modifier 96.1 0.03 1E-06 54.6 10.7 102 161-272 30-171 (340)
282 3p7m_A Malate dehydrogenase; p 96.1 0.017 5.9E-07 55.8 9.1 110 164-279 4-127 (321)
283 4ep1_A Otcase, ornithine carba 96.1 0.092 3.1E-06 51.0 14.1 104 162-272 176-294 (340)
284 3e8x_A Putative NAD-dependent 96.1 0.011 3.6E-07 53.5 7.2 77 161-247 17-95 (236)
285 4amu_A Ornithine carbamoyltran 96.1 0.079 2.7E-06 52.0 13.7 106 163-272 178-300 (365)
286 3k92_A NAD-GDH, NAD-specific g 96.1 0.036 1.2E-06 55.5 11.4 115 160-291 216-342 (424)
287 2yfq_A Padgh, NAD-GDH, NAD-spe 96.1 0.022 7.4E-07 57.2 9.8 117 161-292 208-340 (421)
288 3gg2_A Sugar dehydrogenase, UD 96.1 0.018 6.3E-07 58.2 9.3 98 160-275 313-421 (450)
289 3fi9_A Malate dehydrogenase; s 96.1 0.014 4.8E-07 57.0 8.2 76 163-244 6-84 (343)
290 1oi7_A Succinyl-COA synthetase 96.1 0.01 3.5E-07 56.5 7.0 104 165-291 7-116 (288)
291 3tum_A Shikimate dehydrogenase 96.0 0.0088 3E-07 56.4 6.4 101 161-271 121-224 (269)
292 3moi_A Probable dehydrogenase; 96.0 0.012 4E-07 58.1 7.6 69 166-247 3-75 (387)
293 1hdg_O Holo-D-glyceraldehyde-3 96.0 0.0083 2.9E-07 58.3 6.3 32 166-197 1-34 (332)
294 1u8f_O GAPDH, glyceraldehyde-3 96.0 0.011 3.7E-07 57.6 7.1 103 166-274 4-124 (335)
295 3btv_A Galactose/lactose metab 96.0 0.011 3.9E-07 59.3 7.4 70 166-246 21-99 (438)
296 4f2g_A Otcase 1, ornithine car 96.0 0.074 2.5E-06 51.1 12.7 101 162-272 151-264 (309)
297 4fcc_A Glutamate dehydrogenase 96.0 0.029 1E-06 56.5 10.2 117 161-291 231-367 (450)
298 1b7g_O Protein (glyceraldehyde 96.0 0.022 7.5E-07 55.5 9.1 80 167-247 3-88 (340)
299 1lu9_A Methylene tetrahydromet 96.0 0.016 5.4E-07 54.7 7.9 39 162-201 116-155 (287)
300 1yqd_A Sinapyl alcohol dehydro 95.9 0.012 3.9E-07 57.6 7.0 94 164-273 187-283 (366)
301 3tpf_A Otcase, ornithine carba 95.9 0.13 4.3E-06 49.4 14.1 104 162-272 142-262 (307)
302 2czc_A Glyceraldehyde-3-phosph 95.9 0.012 4.1E-07 57.1 7.1 80 166-248 3-91 (334)
303 1oth_A Protein (ornithine tran 95.9 0.079 2.7E-06 51.1 12.7 107 162-272 152-271 (321)
304 2d8a_A PH0655, probable L-thre 95.9 0.014 4.9E-07 56.4 7.5 95 164-273 167-268 (348)
305 1zud_1 Adenylyltransferase THI 95.9 0.023 7.8E-07 52.8 8.6 103 161-272 24-150 (251)
306 4gqa_A NAD binding oxidoreduct 95.9 0.013 4.4E-07 58.1 7.3 70 166-247 27-107 (412)
307 2nvw_A Galactose/lactose metab 95.9 0.027 9.2E-07 57.3 9.7 110 166-290 40-165 (479)
308 2we8_A Xanthine dehydrogenase; 95.9 0.015 5.2E-07 57.6 7.5 141 165-347 204-361 (386)
309 4a8p_A Putrescine carbamoyltra 95.9 0.66 2.3E-05 45.2 19.0 103 162-272 150-270 (355)
310 2xxj_A L-LDH, L-lactate dehydr 95.8 0.0097 3.3E-07 57.2 5.9 102 166-273 1-117 (310)
311 1rjw_A ADH-HT, alcohol dehydro 95.8 0.019 6.6E-07 55.2 8.1 96 164-274 164-263 (339)
312 3u3x_A Oxidoreductase; structu 95.8 0.044 1.5E-06 53.4 10.6 69 165-246 26-98 (361)
313 3fhl_A Putative oxidoreductase 95.8 0.0077 2.6E-07 58.8 5.1 67 166-247 6-76 (362)
314 2fp4_A Succinyl-COA ligase [GD 95.8 0.027 9.1E-07 54.1 8.8 110 161-292 9-125 (305)
315 3ijp_A DHPR, dihydrodipicolina 95.8 0.02 7E-07 54.5 7.8 98 166-274 22-121 (288)
316 3dty_A Oxidoreductase, GFO/IDH 95.8 0.02 6.9E-07 56.6 8.1 73 165-247 12-96 (398)
317 2cdc_A Glucose dehydrogenase g 95.8 0.0089 3E-07 58.3 5.5 95 162-273 178-279 (366)
318 1lc0_A Biliverdin reductase A; 95.8 0.013 4.3E-07 55.7 6.4 103 166-292 8-118 (294)
319 1pqw_A Polyketide synthase; ro 95.8 0.015 5.1E-07 51.2 6.4 95 164-274 38-139 (198)
320 3g79_A NDP-N-acetyl-D-galactos 95.7 0.018 6.2E-07 58.7 7.7 99 160-282 348-458 (478)
321 3i23_A Oxidoreductase, GFO/IDH 95.7 0.013 4.5E-07 56.8 6.4 70 166-247 3-76 (349)
322 3ip1_A Alcohol dehydrogenase, 95.7 0.043 1.5E-06 54.2 10.3 101 163-273 212-319 (404)
323 2ixa_A Alpha-N-acetylgalactosa 95.7 0.045 1.5E-06 54.9 10.5 75 166-247 21-102 (444)
324 1cdo_A Alcohol dehydrogenase; 95.7 0.072 2.5E-06 51.9 11.7 95 164-273 192-295 (374)
325 3do5_A HOM, homoserine dehydro 95.7 0.051 1.7E-06 52.6 10.3 116 166-291 3-135 (327)
326 3ojo_A CAP5O; rossmann fold, c 95.7 0.033 1.1E-06 56.0 9.3 87 162-275 312-409 (431)
327 3aoe_E Glutamate dehydrogenase 95.7 0.091 3.1E-06 52.5 12.3 112 161-292 214-337 (419)
328 1zh8_A Oxidoreductase; TM0312, 95.7 0.024 8.3E-07 54.7 8.0 69 166-247 19-93 (340)
329 2jhf_A Alcohol dehydrogenase E 95.7 0.069 2.4E-06 52.0 11.4 95 164-273 191-294 (374)
330 4ew6_A D-galactose-1-dehydroge 95.7 0.016 5.4E-07 55.9 6.6 62 164-245 24-90 (330)
331 3s2e_A Zinc-containing alcohol 95.7 0.02 6.8E-07 55.1 7.3 94 164-272 166-263 (340)
332 1kyq_A Met8P, siroheme biosynt 95.6 0.0069 2.3E-07 57.4 3.8 41 159-200 7-47 (274)
333 3cmc_O GAPDH, glyceraldehyde-3 95.6 0.011 3.8E-07 57.5 5.4 31 167-197 3-33 (334)
334 3vh1_A Ubiquitin-like modifier 95.6 0.044 1.5E-06 57.1 10.2 103 161-272 323-464 (598)
335 3ijr_A Oxidoreductase, short c 95.6 0.038 1.3E-06 52.0 9.0 40 161-201 43-83 (291)
336 3lk7_A UDP-N-acetylmuramoylala 95.6 0.018 6E-07 58.1 7.0 120 162-290 6-138 (451)
337 1e3i_A Alcohol dehydrogenase, 95.6 0.082 2.8E-06 51.5 11.7 95 164-273 195-298 (376)
338 4h3v_A Oxidoreductase domain p 95.6 0.02 7E-07 55.5 7.3 70 166-247 7-86 (390)
339 1xyg_A Putative N-acetyl-gamma 95.6 0.031 1.1E-06 54.8 8.6 95 165-273 16-113 (359)
340 3orq_A N5-carboxyaminoimidazol 95.6 0.0061 2.1E-07 60.0 3.5 38 162-200 9-46 (377)
341 3grf_A Ornithine carbamoyltran 95.6 0.23 7.8E-06 48.0 14.4 107 161-272 157-283 (328)
342 1cf2_P Protein (glyceraldehyde 95.6 0.0055 1.9E-07 59.7 3.0 79 167-247 3-89 (337)
343 2dt5_A AT-rich DNA-binding pro 95.5 0.0069 2.4E-07 55.1 3.3 67 166-246 81-150 (211)
344 4ej6_A Putative zinc-binding d 95.5 0.034 1.2E-06 54.4 8.6 95 164-273 182-285 (370)
345 3gd5_A Otcase, ornithine carba 95.5 0.19 6.4E-06 48.6 13.6 107 162-272 154-273 (323)
346 3o9z_A Lipopolysaccaride biosy 95.5 0.019 6.6E-07 54.9 6.7 67 166-246 4-82 (312)
347 1piw_A Hypothetical zinc-type 95.5 0.019 6.5E-07 55.8 6.7 96 164-273 179-277 (360)
348 2w37_A Ornithine carbamoyltran 95.5 0.16 5.4E-06 49.7 13.1 107 162-272 173-295 (359)
349 1p0f_A NADP-dependent alcohol 95.5 0.081 2.8E-06 51.5 11.2 95 164-273 191-294 (373)
350 1e3j_A NADP(H)-dependent ketos 95.5 0.1 3.5E-06 50.3 11.8 95 164-273 168-272 (352)
351 4gsl_A Ubiquitin-like modifier 95.5 0.054 1.8E-06 56.6 10.1 102 161-272 322-463 (615)
352 2fzw_A Alcohol dehydrogenase c 95.5 0.075 2.6E-06 51.7 10.7 95 164-273 190-293 (373)
353 3r6d_A NAD-dependent epimerase 95.4 0.014 4.7E-07 52.2 4.9 99 166-275 6-110 (221)
354 2d4a_B Malate dehydrogenase; a 95.4 0.015 5E-07 55.9 5.3 102 167-273 1-117 (308)
355 1ys4_A Aspartate-semialdehyde 95.4 0.012 4.2E-07 57.5 4.7 102 166-273 9-115 (354)
356 3h2s_A Putative NADH-flavin re 95.4 0.077 2.6E-06 47.0 9.7 96 166-273 1-105 (224)
357 3two_A Mannitol dehydrogenase; 95.4 0.021 7.3E-07 55.1 6.4 91 164-273 176-266 (348)
358 3nv9_A Malic enzyme; rossmann 95.3 0.23 8E-06 50.0 13.8 168 108-322 186-367 (487)
359 3uko_A Alcohol dehydrogenase c 95.3 0.072 2.5E-06 52.0 10.2 95 164-273 193-296 (378)
360 3oqb_A Oxidoreductase; structu 95.3 0.047 1.6E-06 53.4 8.9 71 166-248 7-95 (383)
361 3cps_A Glyceraldehyde 3-phosph 95.3 0.039 1.3E-06 54.0 8.1 30 166-196 18-48 (354)
362 1pl8_A Human sorbitol dehydrog 95.3 0.049 1.7E-06 52.8 8.8 95 164-273 171-274 (356)
363 3oa2_A WBPB; oxidoreductase, s 95.3 0.023 8E-07 54.5 6.4 67 166-246 4-83 (318)
364 4a8t_A Putrescine carbamoyltra 95.3 0.22 7.7E-06 48.3 13.3 103 162-272 172-292 (339)
365 3e5r_O PP38, glyceraldehyde-3- 95.3 0.021 7.2E-07 55.6 6.0 31 166-196 4-34 (337)
366 1uuf_A YAHK, zinc-type alcohol 95.3 0.02 6.8E-07 56.0 5.8 93 164-273 194-289 (369)
367 2y0c_A BCEC, UDP-glucose dehyd 95.3 0.12 4.1E-06 52.5 11.8 110 160-281 323-446 (478)
368 3csu_A Protein (aspartate carb 95.3 0.057 2E-06 51.9 8.8 103 162-272 151-267 (310)
369 2yyy_A Glyceraldehyde-3-phosph 95.2 0.024 8.2E-07 55.3 6.3 31 166-196 3-33 (343)
370 1ml4_A Aspartate transcarbamoy 95.2 0.037 1.3E-06 53.1 7.5 102 162-271 152-267 (308)
371 1hdo_A Biliverdin IX beta redu 95.2 0.11 3.9E-06 45.0 10.2 72 165-246 3-77 (206)
372 1f8f_A Benzyl alcohol dehydrog 95.2 0.041 1.4E-06 53.6 7.9 95 164-273 190-290 (371)
373 2dq4_A L-threonine 3-dehydroge 95.2 0.042 1.4E-06 52.9 7.9 94 164-273 164-263 (343)
374 3on5_A BH1974 protein; structu 95.2 0.028 9.5E-07 55.2 6.6 134 165-348 199-345 (362)
375 1v9l_A Glutamate dehydrogenase 95.2 0.13 4.3E-06 51.5 11.5 120 160-292 205-339 (421)
376 1iz0_A Quinone oxidoreductase; 95.2 0.025 8.5E-07 53.4 6.0 93 164-273 125-219 (302)
377 1gad_O D-glyceraldehyde-3-phos 95.1 0.028 9.6E-07 54.5 6.1 32 167-198 3-34 (330)
378 1b8p_A Protein (malate dehydro 95.1 0.11 3.8E-06 50.1 10.4 103 165-273 5-134 (329)
379 3uog_A Alcohol dehydrogenase; 95.0 0.039 1.3E-06 53.7 7.2 94 164-273 189-288 (363)
380 4b7c_A Probable oxidoreductase 95.0 0.028 9.6E-07 53.9 6.1 96 164-274 149-250 (336)
381 3fpc_A NADP-dependent alcohol 95.0 0.044 1.5E-06 53.0 7.5 94 164-272 166-266 (352)
382 4dup_A Quinone oxidoreductase; 95.0 0.032 1.1E-06 54.0 6.5 94 164-273 167-266 (353)
383 2hcy_A Alcohol dehydrogenase 1 95.0 0.047 1.6E-06 52.7 7.6 95 164-273 169-270 (347)
384 1v3u_A Leukotriene B4 12- hydr 95.0 0.057 1.9E-06 51.6 8.2 94 164-273 145-245 (333)
385 4eye_A Probable oxidoreductase 95.0 0.037 1.3E-06 53.3 6.8 93 164-273 159-258 (342)
386 3ew7_A LMO0794 protein; Q8Y8U8 95.0 0.072 2.5E-06 47.0 8.2 97 166-275 1-105 (221)
387 3v2g_A 3-oxoacyl-[acyl-carrier 95.0 0.058 2E-06 50.3 7.9 41 161-202 27-68 (271)
388 2ozp_A N-acetyl-gamma-glutamyl 95.0 0.039 1.3E-06 53.8 6.9 95 166-273 5-100 (345)
389 3k31_A Enoyl-(acyl-carrier-pro 94.9 0.059 2E-06 50.8 7.9 39 161-200 26-67 (296)
390 4ina_A Saccharopine dehydrogen 94.9 0.032 1.1E-06 55.4 6.3 100 166-273 2-108 (405)
391 4h31_A Otcase, ornithine carba 94.9 0.56 1.9E-05 45.8 15.0 108 161-272 177-300 (358)
392 1mld_A Malate dehydrogenase; o 94.9 0.12 4.3E-06 49.4 10.2 105 166-281 1-124 (314)
393 3qvo_A NMRA family protein; st 94.9 0.024 8.1E-07 51.4 4.8 102 163-276 21-128 (236)
394 3keo_A Redox-sensing transcrip 94.8 0.015 5E-07 53.0 3.2 71 165-247 84-159 (212)
395 2x5j_O E4PDH, D-erythrose-4-ph 94.8 0.038 1.3E-06 53.8 6.3 32 166-197 3-37 (339)
396 2nqt_A N-acetyl-gamma-glutamyl 94.8 0.1 3.4E-06 51.0 9.3 104 165-283 9-121 (352)
397 1rm4_O Glyceraldehyde 3-phosph 94.8 0.034 1.2E-06 54.1 5.9 29 167-196 3-34 (337)
398 2q3e_A UDP-glucose 6-dehydroge 94.8 0.15 5.1E-06 51.6 10.9 111 162-279 326-448 (467)
399 3oig_A Enoyl-[acyl-carrier-pro 94.8 0.086 2.9E-06 48.5 8.4 38 162-200 4-44 (266)
400 3ff4_A Uncharacterized protein 94.8 0.029 1E-06 46.4 4.6 99 166-292 5-107 (122)
401 3eag_A UDP-N-acetylmuramate:L- 94.8 0.05 1.7E-06 52.3 7.0 115 165-290 4-134 (326)
402 2pd4_A Enoyl-[acyl-carrier-pro 94.7 0.037 1.3E-06 51.5 5.9 38 162-200 3-43 (275)
403 3d6n_B Aspartate carbamoyltran 94.7 0.97 3.3E-05 42.9 15.7 68 162-245 143-213 (291)
404 3ip3_A Oxidoreductase, putativ 94.7 0.024 8.2E-07 54.6 4.6 68 166-245 3-76 (337)
405 3r3s_A Oxidoreductase; structu 94.7 0.11 3.7E-06 48.9 9.1 39 161-200 45-84 (294)
406 3h9e_O Glyceraldehyde-3-phosph 94.7 0.035 1.2E-06 54.1 5.7 34 166-200 8-42 (346)
407 3dhn_A NAD-dependent epimerase 94.7 0.04 1.4E-06 49.1 5.7 71 166-247 5-78 (227)
408 3tqh_A Quinone oxidoreductase; 94.7 0.036 1.2E-06 52.9 5.7 93 164-273 152-246 (321)
409 3hhp_A Malate dehydrogenase; M 94.7 0.12 4E-06 49.7 9.3 109 166-283 1-127 (312)
410 1nvm_B Acetaldehyde dehydrogen 94.7 0.062 2.1E-06 51.6 7.3 69 166-245 5-80 (312)
411 4aj2_A L-lactate dehydrogenase 94.6 0.075 2.6E-06 51.5 7.9 105 162-273 16-137 (331)
412 1mv8_A GMD, GDP-mannose 6-dehy 94.6 0.11 3.7E-06 52.0 9.3 96 164-271 312-419 (436)
413 3jyn_A Quinone oxidoreductase; 94.6 0.056 1.9E-06 51.6 6.9 94 164-273 140-240 (325)
414 4ekn_B Aspartate carbamoyltran 94.6 0.3 1E-05 46.8 11.8 74 162-243 148-225 (306)
415 3is3_A 17BETA-hydroxysteroid d 94.6 0.055 1.9E-06 50.2 6.6 41 160-201 13-54 (270)
416 3upl_A Oxidoreductase; rossman 94.6 0.093 3.2E-06 52.9 8.6 123 166-294 24-162 (446)
417 3qwb_A Probable quinone oxidor 94.5 0.058 2E-06 51.6 6.9 94 164-273 148-248 (334)
418 2cf5_A Atccad5, CAD, cinnamyl 94.5 0.055 1.9E-06 52.5 6.7 94 164-273 180-276 (357)
419 2yv1_A Succinyl-COA ligase [AD 94.5 0.041 1.4E-06 52.4 5.6 103 167-291 15-122 (294)
420 2p91_A Enoyl-[acyl-carrier-pro 94.5 0.097 3.3E-06 48.8 8.2 38 162-200 18-58 (285)
421 4e4t_A Phosphoribosylaminoimid 94.5 0.029 9.9E-07 56.0 4.8 39 162-201 32-70 (419)
422 2c0c_A Zinc binding alcohol de 94.5 0.046 1.6E-06 53.2 6.0 94 164-273 163-262 (362)
423 1qor_A Quinone oxidoreductase; 94.5 0.063 2.2E-06 51.2 6.9 94 164-273 140-240 (327)
424 3grk_A Enoyl-(acyl-carrier-pro 94.5 0.093 3.2E-06 49.4 8.0 39 161-200 27-68 (293)
425 2h6e_A ADH-4, D-arabinose 1-de 94.5 0.046 1.6E-06 52.6 6.0 95 164-273 170-270 (344)
426 4gmf_A Yersiniabactin biosynth 94.4 0.028 9.7E-07 55.4 4.5 68 165-247 7-77 (372)
427 2d2i_A Glyceraldehyde 3-phosph 94.4 0.037 1.3E-06 54.6 5.2 32 166-197 3-36 (380)
428 1zq6_A Otcase, ornithine carba 94.4 0.95 3.3E-05 44.2 15.1 101 163-271 188-314 (359)
429 3b1j_A Glyceraldehyde 3-phosph 94.4 0.038 1.3E-06 53.8 5.2 31 166-196 3-35 (339)
430 1dih_A Dihydrodipicolinate red 94.4 0.024 8.2E-07 53.5 3.6 74 166-245 6-81 (273)
431 3gms_A Putative NADPH:quinone 94.3 0.043 1.5E-06 52.7 5.4 94 164-273 144-244 (340)
432 2vn8_A Reticulon-4-interacting 94.3 0.26 8.7E-06 48.0 11.0 96 164-274 183-282 (375)
433 3h8v_A Ubiquitin-like modifier 94.2 0.1 3.5E-06 49.6 7.8 38 161-199 32-70 (292)
434 1lnq_A MTHK channels, potassiu 94.2 0.11 3.7E-06 49.9 7.9 91 165-270 115-209 (336)
435 2o3j_A UDP-glucose 6-dehydroge 94.1 0.25 8.7E-06 50.1 10.8 112 162-283 332-456 (481)
436 3m6i_A L-arabinitol 4-dehydrog 94.0 0.35 1.2E-05 46.6 11.3 95 164-273 179-284 (363)
437 4g65_A TRK system potassium up 94.0 0.081 2.8E-06 53.6 6.9 73 165-247 3-79 (461)
438 3i6i_A Putative leucoanthocyan 94.0 0.1 3.6E-06 49.8 7.4 36 163-199 8-44 (346)
439 3vtf_A UDP-glucose 6-dehydroge 94.0 0.1 3.5E-06 52.6 7.5 90 161-274 329-428 (444)
440 3pi7_A NADH oxidoreductase; gr 94.0 0.16 5.4E-06 48.9 8.7 92 166-273 166-264 (349)
441 3pxx_A Carveol dehydrogenase; 94.0 0.16 5.5E-06 47.0 8.4 37 161-198 6-43 (287)
442 2eih_A Alcohol dehydrogenase; 93.9 0.1 3.5E-06 50.2 7.1 37 164-201 166-203 (343)
443 3dr3_A N-acetyl-gamma-glutamyl 93.9 0.08 2.7E-06 51.5 6.3 99 166-273 5-107 (337)
444 2ep5_A 350AA long hypothetical 93.9 0.083 2.9E-06 51.5 6.5 100 166-273 5-109 (350)
445 2g82_O GAPDH, glyceraldehyde-3 93.9 0.05 1.7E-06 52.8 4.8 29 167-196 2-30 (331)
446 1vj0_A Alcohol dehydrogenase, 93.9 0.098 3.4E-06 51.2 7.0 95 164-273 195-299 (380)
447 1xq6_A Unknown protein; struct 93.9 0.1 3.4E-06 46.9 6.6 73 163-246 2-79 (253)
448 1o6z_A MDH, malate dehydrogena 93.8 0.2 6.9E-06 47.6 9.0 103 166-273 1-120 (303)
449 2wyu_A Enoyl-[acyl carrier pro 93.8 0.058 2E-06 49.7 5.0 38 162-200 5-45 (261)
450 2rir_A Dipicolinate synthase, 93.8 0.16 5.3E-06 48.1 8.1 109 163-294 5-123 (300)
451 3fbg_A Putative arginate lyase 93.7 0.099 3.4E-06 50.4 6.7 93 164-272 150-248 (346)
452 3u95_A Glycoside hydrolase, fa 93.6 0.18 6.2E-06 51.2 8.7 76 166-244 1-84 (477)
453 2dph_A Formaldehyde dismutase; 93.6 0.11 3.8E-06 51.1 6.9 98 164-273 185-300 (398)
454 1qsg_A Enoyl-[acyl-carrier-pro 93.6 0.072 2.4E-06 49.1 5.3 37 162-199 6-45 (265)
455 2j3h_A NADP-dependent oxidored 93.6 0.088 3E-06 50.5 6.0 95 164-273 155-256 (345)
456 1kol_A Formaldehyde dehydrogen 93.5 0.18 6E-06 49.5 8.2 100 164-273 185-301 (398)
457 1smk_A Malate dehydrogenase, g 93.5 0.11 3.8E-06 50.1 6.6 72 165-245 8-85 (326)
458 3gpi_A NAD-dependent epimerase 93.5 0.046 1.6E-06 50.7 3.7 36 164-200 2-37 (286)
459 2j8z_A Quinone oxidoreductase; 93.5 0.12 4.1E-06 49.9 6.9 37 164-201 162-199 (354)
460 3jv7_A ADH-A; dehydrogenase, n 93.5 0.15 5.2E-06 48.9 7.5 94 164-273 171-271 (345)
461 2yv2_A Succinyl-COA synthetase 93.5 0.1 3.4E-06 49.8 6.2 107 163-291 10-123 (297)
462 1vkn_A N-acetyl-gamma-glutamyl 93.5 0.38 1.3E-05 46.9 10.4 96 164-273 12-108 (351)
463 2ejw_A HDH, homoserine dehydro 93.5 0.07 2.4E-06 51.7 5.1 102 166-289 4-116 (332)
464 1wly_A CAAR, 2-haloacrylate re 93.4 0.13 4.6E-06 49.0 7.0 37 164-201 145-182 (333)
465 4eez_A Alcohol dehydrogenase 1 93.4 0.26 8.8E-06 47.1 9.0 38 164-201 163-200 (348)
466 3dqp_A Oxidoreductase YLBE; al 93.3 0.15 5.3E-06 45.1 6.8 71 166-248 1-75 (219)
467 2b5w_A Glucose dehydrogenase; 93.3 0.097 3.3E-06 50.6 5.9 95 163-273 171-274 (357)
468 3mtj_A Homoserine dehydrogenas 93.3 0.14 4.8E-06 51.6 7.1 108 165-291 10-130 (444)
469 3r3j_A Glutamate dehydrogenase 93.3 0.2 6.7E-06 50.5 8.1 37 160-197 234-271 (456)
470 2gas_A Isoflavone reductase; N 93.3 0.2 6.9E-06 46.6 7.8 75 165-246 2-86 (307)
471 2zb4_A Prostaglandin reductase 93.2 0.14 4.8E-06 49.4 6.9 93 166-273 162-261 (357)
472 3ius_A Uncharacterized conserv 93.2 0.13 4.6E-06 47.3 6.4 70 165-247 5-74 (286)
473 1yb5_A Quinone oxidoreductase; 93.2 0.19 6.4E-06 48.6 7.7 37 164-201 170-207 (351)
474 4dmm_A 3-oxoacyl-[acyl-carrier 93.1 0.093 3.2E-06 48.7 5.2 41 160-201 23-64 (269)
475 3c8m_A Homoserine dehydrogenas 93.1 0.12 4E-06 50.1 6.0 116 166-290 7-140 (331)
476 2r6j_A Eugenol synthase 1; phe 93.0 0.24 8.3E-06 46.4 8.0 74 166-245 12-88 (318)
477 3mw9_A GDH 1, glutamate dehydr 93.0 0.61 2.1E-05 47.5 11.2 114 162-291 241-365 (501)
478 2ph5_A Homospermidine synthase 92.9 0.53 1.8E-05 47.8 10.7 34 166-199 14-50 (480)
479 4dvj_A Putative zinc-dependent 92.9 0.35 1.2E-05 46.9 9.2 92 164-271 171-269 (363)
480 2x9g_A PTR1, pteridine reducta 92.9 0.15 5.2E-06 47.5 6.3 40 159-199 17-57 (288)
481 3h5n_A MCCB protein; ubiquitin 92.9 0.22 7.5E-06 48.6 7.6 38 161-199 114-152 (353)
482 1jvb_A NAD(H)-dependent alcoho 92.9 0.29 9.9E-06 47.0 8.5 95 164-273 170-272 (347)
483 2bka_A CC3, TAT-interacting pr 92.8 0.071 2.4E-06 47.9 3.8 75 163-247 16-95 (242)
484 3sds_A Ornithine carbamoyltran 92.8 0.62 2.1E-05 45.4 10.7 107 161-272 184-308 (353)
485 4a2c_A Galactitol-1-phosphate 92.8 0.54 1.9E-05 44.8 10.2 96 163-273 159-261 (346)
486 2x0j_A Malate dehydrogenase; o 92.7 0.17 5.9E-06 48.1 6.5 111 166-281 1-125 (294)
487 3gqv_A Enoyl reductase; medium 92.7 0.66 2.3E-05 45.0 10.9 94 163-272 163-263 (371)
488 1xgk_A Nitrogen metabolite rep 92.7 0.091 3.1E-06 50.9 4.6 104 164-275 4-115 (352)
489 1qyc_A Phenylcoumaran benzylic 92.7 0.23 7.8E-06 46.2 7.2 76 165-245 4-86 (308)
490 4da9_A Short-chain dehydrogena 92.7 0.24 8.2E-06 46.1 7.4 40 161-201 25-65 (280)
491 3u5t_A 3-oxoacyl-[acyl-carrier 92.7 0.069 2.4E-06 49.6 3.6 38 161-199 23-61 (267)
492 1g0o_A Trihydroxynaphthalene r 92.6 0.22 7.4E-06 46.3 7.0 40 161-201 25-65 (283)
493 1t4b_A Aspartate-semialdehyde 92.6 0.25 8.6E-06 48.5 7.7 91 166-273 2-99 (367)
494 2pzm_A Putative nucleotide sug 92.6 0.075 2.6E-06 50.5 3.8 39 161-200 16-55 (330)
495 1p9l_A Dihydrodipicolinate red 92.6 0.35 1.2E-05 44.7 8.2 31 167-197 2-34 (245)
496 4id9_A Short-chain dehydrogena 92.6 0.08 2.8E-06 50.3 4.0 70 161-246 15-87 (347)
497 3o38_A Short chain dehydrogena 92.6 0.1 3.4E-06 48.0 4.6 40 161-201 18-59 (266)
498 3afn_B Carbonyl reductase; alp 92.6 0.099 3.4E-06 47.4 4.4 36 162-198 4-40 (258)
499 4fn4_A Short chain dehydrogena 92.5 0.19 6.4E-06 46.8 6.3 40 161-201 3-43 (254)
500 2h7i_A Enoyl-[acyl-carrier-pro 92.4 0.13 4.5E-06 47.5 5.1 39 162-201 4-45 (269)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=8.1e-71 Score=544.67 Aligned_cols=319 Identities=27% Similarity=0.428 Sum_probs=286.3
Q ss_pred CCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHh-cccCCcEEE
Q 016162 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKAFS 91 (394)
Q Consensus 13 ~~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l-~~l~~k~I~ 91 (394)
++++|||++.+++++ ..+.|++. +++++.. .....+++++.+.+. ++|+++++..+++++++++++ |+| |+|+
T Consensus 26 ~~~~kvlv~~~~~~~-~~~~l~~~-~~v~~~~-~~~~~~~~~l~~~~~-~~d~li~~~~~~i~~~~l~~~~~~L--k~I~ 99 (345)
T 4g2n_A 26 HPIQKAFLCRRFTPA-IEAELRQR-FDLEVNL-EDTVLTPSGIASRAH-GAEVLFVTATEAITAEVIRKLQPGL--KTIA 99 (345)
T ss_dssp -CCCEEEESSCCCHH-HHHHHHHH-SEEEECT-TCCCCCHHHHHHHTT-TCSEEEECTTSCBCHHHHHHTTTTC--CEEE
T ss_pred CCCCEEEEeCCCCHH-HHHHHHcc-CCEEEec-CCCCCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHHhhcCCc--eEEE
Confidence 468899999999874 56777665 5776533 233568899999988 499999988789999999998 677 9999
Q ss_pred EcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016162 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (394)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGII 171 (394)
+.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.+..+.|.+++|||||||
T Consensus 100 ~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGII 179 (345)
T 4g2n_A 100 TLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIF 179 (345)
T ss_dssp ESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEE
T ss_pred EcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999888655567899999999999
Q ss_pred ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhh
Q 016162 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (394)
Q Consensus 172 GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~ 251 (394)
|+|+||+.+|+++ ++|||+|++|||+....... .+ .....++++++++||+|++|+|+|++|+
T Consensus 180 GlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~~-----------~g-----~~~~~~l~ell~~sDvV~l~~Plt~~T~ 242 (345)
T 4g2n_A 180 GMGRIGRAIATRA-RGFGLAIHYHNRTRLSHALE-----------EG-----AIYHDTLDSLLGASDIFLIAAPGRPELK 242 (345)
T ss_dssp SCSHHHHHHHHHH-HTTTCEEEEECSSCCCHHHH-----------TT-----CEECSSHHHHHHTCSEEEECSCCCGGGT
T ss_pred EeChhHHHHHHHH-HHCCCEEEEECCCCcchhhh-----------cC-----CeEeCCHHHHHhhCCEEEEecCCCHHHH
Confidence 9999999999997 89999999999986432111 01 1223589999999999999999999999
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHHH
Q 016162 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (394)
Q Consensus 252 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~ 331 (394)
++|+++.|+.||+|++|||+|||+++|++||++||++|+++||+||||++||.+++|||++|||++|||+|++|.+++++
T Consensus 243 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~ 322 (345)
T 4g2n_A 243 GFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDA 322 (345)
T ss_dssp TCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHH
T ss_pred HHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999996678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Q 016162 332 MATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 332 ~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+...+++|+.+|++|+++.|.|+
T Consensus 323 ~~~~~~~ni~~~l~g~~~~~~V~ 345 (345)
T 4g2n_A 323 MGWLLIQGIEALNQSDVPDNLIS 345 (345)
T ss_dssp HHHHHHHHHHHHHTTCCCTTBCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999988763
No 2
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.1e-68 Score=539.13 Aligned_cols=320 Identities=29% Similarity=0.383 Sum_probs=282.1
Q ss_pred CCCCceEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcE
Q 016162 11 NPNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKA 89 (394)
Q Consensus 11 ~~~~~~~vlv~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~ 89 (394)
.|+.++|||+++++++. ..+.|++.++ ++++.. ...+++++.+.+.+ +|++++++.+++++++++++|+| |+
T Consensus 11 ~~~~~~kIl~~~~i~~~-~~~~l~~~g~~~v~~~~---~~~~~~~l~~~~~~-~d~l~v~~~~~i~~~~l~~~p~L--k~ 83 (416)
T 3k5p_A 11 LSRDRINVLLLEGISQT-AVEYFKSSGYTNVTHLP---KALDKADLIKAISS-AHIIGIRSRTQLTEEIFAAANRL--IA 83 (416)
T ss_dssp -CGGGSCEEECSCCCHH-HHHHHHHTTCCCEEECS---SCCCHHHHHHHHTT-CSEEEECSSCCBCHHHHHHCTTC--CE
T ss_pred CCCCCcEEEEECCCCHH-HHHHHHHCCCcEEEECC---CCCCHHHHHHHccC-CEEEEEcCCCCCCHHHHHhCCCc--EE
Confidence 35578999999999874 5788888887 776532 24688999999984 99999988889999999999998 99
Q ss_pred EEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEE
Q 016162 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (394)
Q Consensus 90 I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvG 169 (394)
|+++|+|+||||+++|+++||.|+|+|++|+++||||++++||+++|+++.+++.+++|.|.. ..+.+.+++|||+|
T Consensus 84 I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~---~~~~~~el~gktvG 160 (416)
T 3k5p_A 84 VGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEK---TAIGSREVRGKTLG 160 (416)
T ss_dssp EEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC---CCTTCCCSTTCEEE
T ss_pred EEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccc---cCCCCccCCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999998653 33457899999999
Q ss_pred EEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChh
Q 016162 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (394)
Q Consensus 170 IIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~ 249 (394)
|||+|+||+.+|+++ ++|||+|++||++..... + ......++++++++||+|++|+|++++
T Consensus 161 IIGlG~IG~~vA~~l-~~~G~~V~~yd~~~~~~~--------------~----~~~~~~sl~ell~~aDvV~lhvPlt~~ 221 (416)
T 3k5p_A 161 IVGYGNIGSQVGNLA-ESLGMTVRYYDTSDKLQY--------------G----NVKPAASLDELLKTSDVVSLHVPSSKS 221 (416)
T ss_dssp EECCSHHHHHHHHHH-HHTTCEEEEECTTCCCCB--------------T----TBEECSSHHHHHHHCSEEEECCCC---
T ss_pred EEeeCHHHHHHHHHH-HHCCCEEEEECCcchhcc--------------c----CcEecCCHHHHHhhCCEEEEeCCCCHH
Confidence 999999999999996 899999999998743210 0 112356899999999999999999999
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-----CccccCCceEEcCCCCCC
Q 016162 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-----PGLSEMKNAIVVPHIASA 324 (394)
Q Consensus 250 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~-----~~L~~~~nvilTPHia~~ 324 (394)
|+++|+++.|++||+|++|||+|||+++|++||++||++|+++||+||||++||++. +|||++|||++|||+||+
T Consensus 222 T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~ 301 (416)
T 3k5p_A 222 TSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGS 301 (416)
T ss_dssp --CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTC
T ss_pred HhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999864 589999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCCCCccCcccC
Q 016162 325 SKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLN 361 (394)
Q Consensus 325 t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~~~~~~~~ 361 (394)
|.|+++++...+++|+.+|++|+...++||. |-+.
T Consensus 302 T~ea~~~~~~~~~~nl~~~l~~g~~~~~Vn~--p~~~ 336 (416)
T 3k5p_A 302 TEEAQERIGTEVTRKLVEYSDVGSTVGAVNF--PQVQ 336 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCTTBSSS--CCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhhCCCCceeeC--CCcC
Confidence 9999999999999999999999999999983 5543
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1.5e-68 Score=526.50 Aligned_cols=318 Identities=29% Similarity=0.430 Sum_probs=284.8
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEc
Q 016162 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (394)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~ 93 (394)
+++|||++.+++++ ..+.|++.+ ++.+.. .....+++|+.+.+. ++|+++++..+++++++++++|+| |+|++.
T Consensus 1 m~~kvlv~~~~~~~-~~~~l~~~~-~v~~~~-~~~~~~~~~~~~~~~-~~d~~i~~~~~~i~~~~l~~~~~L--k~I~~~ 74 (330)
T 4e5n_A 1 MLPKLVITHRVHEE-ILQLLAPHC-ELITNQ-TDSTLTREEILRRCR-DAQAMMAFMPDRVDADFLQACPEL--RVIGCA 74 (330)
T ss_dssp CCCEEEECSCCCHH-HHHHHTTTC-EEECCC-SSSCCCHHHHHHHHT-TCSEEEECTTCCBCHHHHHHCTTC--CEEEES
T ss_pred CCCEEEEecCCCHH-HHHHHHhCC-eEEEec-CCCCCCHHHHHHHhC-CCeEEEEeCCCCCCHHHHhhCCCC--cEEEEC
Confidence 36789999999874 578887655 665322 233468899999998 499999987789999999999988 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGl 173 (394)
|+|+||||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|..|.+ ...|++++|+||||||+
T Consensus 75 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~l~g~tvGIIG~ 153 (330)
T 4e5n_A 75 LKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQP-RFYGTGLDNATVGFLGM 153 (330)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCS-CCCCCCSTTCEEEEECC
T ss_pred CCcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCc-cccCCccCCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999988875 35688999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhc
Q 016162 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (394)
Q Consensus 174 G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~l 253 (394)
|+||+.+|+++ ++|||+|++|||+....... ..+ | . ...++++++++||+|++|+|+|++|+++
T Consensus 154 G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~--~~~-------g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~l 217 (330)
T 4e5n_A 154 GAIGLAMADRL-QGWGATLQYHEAKALDTQTE--QRL-------G-----L-RQVACSELFASSDFILLALPLNADTLHL 217 (330)
T ss_dssp SHHHHHHHHHT-TTSCCEEEEECSSCCCHHHH--HHH-------T-----E-EECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCCcHhHH--Hhc-------C-----c-eeCCHHHHHhhCCEEEEcCCCCHHHHHH
Confidence 99999999996 89999999999986321111 011 1 1 2358999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCC-------CCC-CCccccCCceEEcCCCCCCc
Q 016162 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE-------PYM-KPGLSEMKNAIVVPHIASAS 325 (394)
Q Consensus 254 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~E-------P~~-~~~L~~~~nvilTPHia~~t 325 (394)
|+++.|+.||+|++|||+|||+++|++||+++|++|++.||+||||++| |++ ++|||++|||++|||+|++|
T Consensus 218 i~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 218 VNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp BCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 9999999999999999999999999999999999999999999999999 975 46999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 326 KWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 326 ~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
.++++++...+++|+.+|++|+++.|.||
T Consensus 298 ~e~~~~~~~~~~~ni~~~~~g~~~~~~vn 326 (330)
T 4e5n_A 298 RAVRLEIERCAAQNILQALAGERPINAVN 326 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCTTBSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccC
Confidence 99999999999999999999999999997
No 4
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=1.9e-69 Score=533.70 Aligned_cols=310 Identities=29% Similarity=0.390 Sum_probs=266.0
Q ss_pred eEEEEeCCCCch-H-HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEc
Q 016162 16 YRVVSTKPMPGT-R-WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (394)
Q Consensus 16 ~~vlv~~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~ 93 (394)
||||++....++ . +.+.+++. .+++........+.+++. ++|+++++..+++++++++++|+| |+|++.
T Consensus 1 Mkil~~~~~~~~~p~~~e~l~~~--~~~~~~~~~~~~~~~~l~-----~ad~i~v~~~~~i~~~~l~~~p~L--k~I~~~ 71 (334)
T 3kb6_A 1 MNVLFTSVPQEDVPFYQEALKDL--SLKIYTTDVSKVPENELK-----KAELISVFVYDKLTEELLSKMPRL--KLIHTR 71 (334)
T ss_dssp -CEEECSCCTTHHHHHHHHTTTS--CEEECSSCGGGSCHHHHH-----HCSEEEECTTSCBCHHHHHTCTTC--CEEEES
T ss_pred CEEEEeCCCcccCHHHHHHHHhC--CcEEEeCCcccCCHHHhc-----CCCEEEEeCCCCCCHHHHhcCCCC--cEEEEC
Confidence 678887532221 1 23334333 444444332334445543 489999998899999999999998 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGl 173 (394)
|+|+||||+++|+++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..|. ...|++++|+|+||||+
T Consensus 72 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~--~~~~~~l~g~tvGIiG~ 149 (334)
T 3kb6_A 72 SVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDS--EILARELNRLTLGVIGT 149 (334)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCG--GGCBCCGGGSEEEEECC
T ss_pred CcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhcccccccccccccccccc--ccccceecCcEEEEECc
Confidence 9999999999999999999999999999999999999999999999999999999985543 35688999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhc
Q 016162 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (394)
Q Consensus 174 G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~l 253 (394)
|+||+.+|+++ ++|||+|++|||+....... .+ ..+.+++|++++||+|++|+|+|++|+|+
T Consensus 150 G~IG~~va~~~-~~fg~~v~~~d~~~~~~~~~-----------~~------~~~~~l~ell~~sDivslh~Plt~~T~~l 211 (334)
T 3kb6_A 150 GRIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------KG------CVYTSLDELLKESDVISLHVPYTKETHHM 211 (334)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------TT------CEECCHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred chHHHHHHHhh-cccCceeeecCCccchhhhh-----------cC------ceecCHHHHHhhCCEEEEcCCCChhhccC
Confidence 99999999996 89999999999986543221 11 13469999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-C---------------ccccCCceEE
Q 016162 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-P---------------GLSEMKNAIV 317 (394)
Q Consensus 254 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~-~---------------~L~~~~nvil 317 (394)
||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||++. + |||++|||++
T Consensus 212 i~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvil 291 (334)
T 3kb6_A 212 INEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVII 291 (334)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEE
T ss_pred cCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEE
Confidence 99999999999999999999999999999999999999999999999999742 1 6899999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 318 VPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
|||+||+|.++++++...+++|+.+|++|++....+|
T Consensus 292 TPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n 328 (334)
T 3kb6_A 292 TPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGN 328 (334)
T ss_dssp CCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGG
T ss_pred CCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 9999999999999999999999999999998776665
No 5
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.3e-69 Score=529.34 Aligned_cols=314 Identities=28% Similarity=0.404 Sum_probs=251.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEE
Q 016162 12 PNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (394)
Q Consensus 12 ~~~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~ 91 (394)
+++|++||++.+++++ ..+.|++ ++++..... ..+++++.+.+. ++|++++++.+++++++++++|+| |+|+
T Consensus 27 ~~~~~~vl~~~~~~~~-~~~~L~~-~~~v~~~~~---~~~~~~~~~~~~-~~d~li~~~~~~i~~~~l~~~p~L--k~I~ 98 (340)
T 4dgs_A 27 RNVKPDLLLVEPMMPF-VMDELQR-NYSVHRLYQ---AADRPALEAALP-SIRAVATGGGAGLSNEWMEKLPSL--GIIA 98 (340)
T ss_dssp ------CEECSCCCHH-HHHTHHH-HSCCEETTC---GGGHHHHHHHGG-GCCEEEEETTTCBCHHHHHHCSSC--CEEE
T ss_pred CCCCCEEEEECCCCHH-HHHHHhc-CCcEEEeCC---CCCHHHHHHHhC-CcEEEEEcCCCCCCHHHHhhCCCC--EEEE
Confidence 3568899999999874 5677765 456654322 236788887775 599999988889999999999988 9999
Q ss_pred EcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016162 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (394)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGII 171 (394)
+.|+|+||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|..+. ..+.|++++|+|||||
T Consensus 99 ~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~-~~~~~~~l~gktiGII 177 (340)
T 4dgs_A 99 INGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGE-QLPLGHSPKGKRIGVL 177 (340)
T ss_dssp EESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC-------CCCCCCTTCEEEEE
T ss_pred ECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCccccc-CcCccccccCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999975431 1235789999999999
Q ss_pred ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhh
Q 016162 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (394)
Q Consensus 172 GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~ 251 (394)
|+|+||+.+|+++ ++|||+|++|||++... .......+++|++++||+|++|+|++++|+
T Consensus 178 GlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~-------------------~~~~~~~sl~ell~~aDvVil~vP~t~~t~ 237 (340)
T 4dgs_A 178 GLGQIGRALASRA-EAFGMSVRYWNRSTLSG-------------------VDWIAHQSPVDLARDSDVLAVCVAASAATQ 237 (340)
T ss_dssp CCSHHHHHHHHHH-HTTTCEEEEECSSCCTT-------------------SCCEECSSHHHHHHTCSEEEECC-------
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEEcCCcccc-------------------cCceecCCHHHHHhcCCEEEEeCCCCHHHH
Confidence 9999999999997 79999999999986431 011234689999999999999999999999
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHHH
Q 016162 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (394)
Q Consensus 252 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~ 331 (394)
++++++.|+.||+|++|||+|||+++|++||++||++|+++||+||||++||++++|||++|||++|||+|++|.+++++
T Consensus 238 ~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~ 317 (340)
T 4dgs_A 238 NIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMA 317 (340)
T ss_dssp ---CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHH
T ss_pred HHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Q 016162 332 MATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 332 ~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+...+++|+.+|++|+++.|.||
T Consensus 318 ~~~~~~~nl~~~~~g~~~~~~Vn 340 (340)
T 4dgs_A 318 MGKLVLANLAAHFAGEKAPNTVN 340 (340)
T ss_dssp HHHHHHHHHHHHHTTSCCTTBC-
T ss_pred HHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999886
No 6
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=5.1e-68 Score=535.32 Aligned_cols=319 Identities=24% Similarity=0.328 Sum_probs=277.0
Q ss_pred CCCceEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEE
Q 016162 12 PNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (394)
Q Consensus 12 ~~~~~~vlv~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I 90 (394)
|+.+||||+++++++. ..+.|++.++ ++++... ..+++++.+.+. ++|++++++.+.+++++++++|+| |+|
T Consensus 1 ~~~~~kil~~~~~~~~-~~~~l~~~~~~~v~~~~~---~~~~~~l~~~~~-~~d~l~~~~~~~~~~~~l~~~~~L--k~I 73 (404)
T 1sc6_A 1 EKDKIKFLLVEGVHQK-ALESLRAAGYTNIEFHKG---ALDDEQLKESIR-DAHFIGLRSRTHLTEDVINAAEKL--VAI 73 (404)
T ss_dssp CCSSCCEEECSCCCHH-HHHHHHHTTCCCEEECSS---CCCHHHHHHHTT-SCSEEEECSSCCBCHHHHHHCSSC--CEE
T ss_pred CCCceEEEEeCCCCHH-HHHHHHhCCCcEEEEcCC---CCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--cEE
Confidence 3456789999988764 5788888777 6765322 358899998887 499999998889999999999998 999
Q ss_pred EEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEE
Q 016162 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (394)
Q Consensus 91 ~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGI 170 (394)
+++|+|+||||+++|+++||.|+|+|++|+++||||++++||+++|+++++++.+++|.|.. ..+.|.+++|||+||
T Consensus 74 ~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~---~~~~~~el~gktlGi 150 (404)
T 1sc6_A 74 GAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNK---LAAGSFEARGKKLGI 150 (404)
T ss_dssp EECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC--------CCCSTTCEEEE
T ss_pred EECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccc---cCCCccccCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999998643 334678999999999
Q ss_pred EecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhh
Q 016162 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (394)
Q Consensus 171 IGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t 250 (394)
||+|+||+.+|+++ ++|||+|++|||+.... .+ ......+++|++++||+|++|+|++++|
T Consensus 151 IGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~--------------~~----~~~~~~~l~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 151 IGYGHIGTQLGILA-ESLGMYVYFYDIENKLP--------------LG----NATQVQHLSDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCCC--------------CT----TCEECSCHHHHHHHCSEEEECCCSSTTT
T ss_pred EeECHHHHHHHHHH-HHCCCEEEEEcCCchhc--------------cC----CceecCCHHHHHhcCCEEEEccCCChHH
Confidence 99999999999997 89999999999975321 01 1123458999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-----CCccccCCceEEcCCCCCCc
Q 016162 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-----KPGLSEMKNAIVVPHIASAS 325 (394)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-----~~~L~~~~nvilTPHia~~t 325 (394)
+++|+++.|++||+|++|||+|||+++|++||+++|++|+++||+||||+.||++ ++|||++|||++|||+|++|
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T 291 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGST 291 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCS
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999986 35899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCccCcccC
Q 016162 326 KWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLN 361 (394)
Q Consensus 326 ~~~~~~~~~~~~~ni~~~l~g~~~~~~v~~~~~~~~ 361 (394)
.|+++++...+++|+.+|++|+++.|.|| . |.+.
T Consensus 292 ~ea~~~~~~~~~~nl~~~l~g~~~~~~vn-~-p~~~ 325 (404)
T 1sc6_A 292 QEAQENIGLEVAGKLIKYSDNGSTLSAVN-F-PEVS 325 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCTTBSS-S-CCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcceec-c-cccc
Confidence 99999999999999999999999999997 4 6553
No 7
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=8.5e-67 Score=515.56 Aligned_cols=313 Identities=27% Similarity=0.397 Sum_probs=270.4
Q ss_pred eEEEEeCCCCc-hHHHHHH-HhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHH-HHHHhcccCCcEEEE
Q 016162 16 YRVVSTKPMPG-TRWINLL-IEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGET-LFAALSRAGGKAFSN 92 (394)
Q Consensus 16 ~~vlv~~~~~~-~~~~~~l-~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~-~l~~l~~l~~k~I~~ 92 (394)
|||++....+. ..+++.+ ++.++++...... .+ +|+.+.+. ++|+++++..++++++ +++++|+.++|+|++
T Consensus 2 mki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~-~~~~~~~~-~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~ 76 (343)
T 2yq5_A 2 TKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQA---LT-SATVDLAE-GCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGL 76 (343)
T ss_dssp CEEEEESCCGGGHHHHHHHHHHHTCEEEEESSC---CS-TTGGGGGT-TCSEEEECCSSCBCCHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEecCcccHHHHHHHHHhCCeEEEECCCC---CC-HHHHHHhc-CCcEEEEcCCCCcCHHHHHHhccccCceEEEE
Confidence 67888763332 2344443 4567777654432 23 56667776 5999999988899999 999998655699999
Q ss_pred cccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHH-cCccCCCCCCcccccccCCCeEEEE
Q 016162 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMR-AGLYDGWLPNLFVGNLLKGQTVGVI 171 (394)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~-~g~~~~w~~~~~~g~~l~gktvGII 171 (394)
.|+|+||||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.++ +|.|. |.. .+.|++++|+|||||
T Consensus 77 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~-w~~-~~~~~~l~gktvgIi 154 (343)
T 2yq5_A 77 RIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFT-WPS-NLISNEIYNLTVGLI 154 (343)
T ss_dssp SSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCC-CCG-GGCBCCGGGSEEEEE
T ss_pred CceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcc-ccc-CCCccccCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999999999 99885 743 356889999999999
Q ss_pred ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhh
Q 016162 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (394)
Q Consensus 172 GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~ 251 (394)
|+|+||+++|+++ ++|||+|++|||+.....+ .+ ....++++++++||+|++|+|+|++|+
T Consensus 155 GlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~------------~~------~~~~~l~ell~~aDvV~l~~Plt~~t~ 215 (343)
T 2yq5_A 155 GVGHIGSAVAEIF-SAMGAKVIAYDVAYNPEFE------------PF------LTYTDFDTVLKEADIVSLHTPLFPSTE 215 (343)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSSCCGGGT------------TT------CEECCHHHHHHHCSEEEECCCCCTTTT
T ss_pred ecCHHHHHHHHHH-hhCCCEEEEECCChhhhhh------------cc------ccccCHHHHHhcCCEEEEcCCCCHHHH
Confidence 9999999999997 8999999999998754111 01 123599999999999999999999999
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCC--CCCC------------ccccCCceEE
Q 016162 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP--YMKP------------GLSEMKNAIV 317 (394)
Q Consensus 252 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP--~~~~------------~L~~~~nvil 317 (394)
++|+++.|+.||+|++|||+|||+++|++||++||++|+++||+||||++|| ++.+ |||++|||++
T Consensus 216 ~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvil 295 (343)
T 2yq5_A 216 NMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVI 295 (343)
T ss_dssp TCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEE
T ss_pred HHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999 3332 7999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 318 VPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
|||+|++|.++++++...+++|+.+|++|+++.|.||
T Consensus 296 TPHia~~t~ea~~~~~~~~~~ni~~~l~g~~~~~~v~ 332 (343)
T 2yq5_A 296 TPHSAFYTETSIRNMVQICLTDQLTIAKGGRPRSIVN 332 (343)
T ss_dssp CSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTTBC-
T ss_pred CCccccchHHHHHHHHHHHHHHHHHHHcCCCCCceEC
Confidence 9999999999999999999999999999999999997
No 8
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=2.1e-66 Score=509.08 Aligned_cols=306 Identities=23% Similarity=0.269 Sum_probs=270.1
Q ss_pred CceEEEEeCCCCchHHHHHH-HhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEE
Q 016162 14 GKYRVVSTKPMPGTRWINLL-IEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (394)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~ 92 (394)
.|||||++.+..+ .|.+.| ++..+++++... .+.+++.+.+.+ +|+++++. .+++++++++|+| |+|++
T Consensus 4 ~~mkili~~~~~~-~~~~~L~~~~~p~~~~~~~----~~~~~~~~~~~~-ad~li~~~--~~~~~~l~~~~~L--k~I~~ 73 (324)
T 3hg7_A 4 SQRTLLLLSQDNA-HYERLLKAAHLPHLRILRA----DNQSDAEKLIGE-AHILMAEP--ARAKPLLAKANKL--SWFQS 73 (324)
T ss_dssp CCEEEEEESTTHH-HHHHHHHHSCCTTEEEEEC----SSHHHHHHHGGG-CSEEEECH--HHHGGGGGGCTTC--CEEEE
T ss_pred cccEEEEecCCCH-HHHHHHhhccCCCeEEEeC----CChhHHHHHhCC-CEEEEECC--CCCHHHHhhCCCc--eEEEE
Confidence 4589999999976 588889 666667776543 256788888874 99999853 4567889999988 99999
Q ss_pred cccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016162 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (394)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIG 172 (394)
.|+|+|+||++++.+ ||.|+|+||+++.+||||++++||+++|++..+++.+++|.|.. ..+.+++|+||||||
T Consensus 74 ~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~-----~~~~~l~g~tvGIIG 147 (324)
T 3hg7_A 74 TYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQS-----HPYQGLKGRTLLILG 147 (324)
T ss_dssp SSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC-----CCCCCSTTCEEEEEC
T ss_pred CCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcC-----CCCcccccceEEEEE
Confidence 999999999998764 99999999999999999999999999999999999999998643 246799999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhh
Q 016162 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (394)
Q Consensus 173 lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~ 252 (394)
+|+||+++|+++ ++|||+|++|||++.... .. . ......++++++++||+|++|+|+|++|++
T Consensus 148 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~~-~-~~~~~~~l~ell~~aDvV~l~lPlt~~T~~ 210 (324)
T 3hg7_A 148 TGSIGQHIAHTG-KHFGMKVLGVSRSGRERA--------------GF-D-QVYQLPALNKMLAQADVIVSVLPATRETHH 210 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCCCT--------------TC-S-EEECGGGHHHHHHTCSEEEECCCCCSSSTT
T ss_pred ECHHHHHHHHHH-HhCCCEEEEEcCChHHhh--------------hh-h-cccccCCHHHHHhhCCEEEEeCCCCHHHHH
Confidence 999999999997 899999999999864310 00 0 112346899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CccccCCceEEcCCCCCCcHHHHHH
Q 016162 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWTREG 331 (394)
Q Consensus 253 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t~~~~~~ 331 (394)
+|+++.|+.||+|++|||+|||+++|++||++||++|+++||+||||++||++. +|||++|||++|||+||.|.+ ++
T Consensus 211 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~ 288 (324)
T 3hg7_A 211 LFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DD 288 (324)
T ss_dssp SBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HH
T ss_pred HhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HH
Confidence 999999999999999999999999999999999999999999999999999864 699999999999999999976 57
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Q 016162 332 MATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 332 ~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+...+++|+.+|++|+++.|.||
T Consensus 289 ~~~~~~~nl~~~~~G~~~~~~V~ 311 (324)
T 3hg7_A 289 VAQIFVRNYIRFIDGQPLDGKID 311 (324)
T ss_dssp HHHHHHHHHHHHHTTCCCTTBCC
T ss_pred HHHHHHHHHHHHHcCCCCcceEC
Confidence 89999999999999999999997
No 9
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=1.6e-65 Score=508.53 Aligned_cols=315 Identities=28% Similarity=0.404 Sum_probs=274.4
Q ss_pred ceEEEEeCCCCchH----HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEe-cCCccccHHHHHHhcccCCcE
Q 016162 15 KYRVVSTKPMPGTR----WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIG-QLTEDWGETLFAALSRAGGKA 89 (394)
Q Consensus 15 ~~~vlv~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~-~~~~~i~~~~l~~l~~l~~k~ 89 (394)
+|||++.+...... ..+.+ .+++++++.. ...+++++.+.+.+ +|++++ +..+++++++++++|+| |+
T Consensus 2 smki~~~d~~~~~~~~~~~~~~l--~~~~v~~~~~--~~~~~~~l~~~~~~-ad~li~~~~~~~~~~~~l~~~~~L--k~ 74 (352)
T 3gg9_A 2 SLKIAVLDDYQDAVRKLDCFSLL--QDHEVKVFNN--TVKGVGQLAARVAD-VEALVLIRERTRVTRQLLDRLPKL--KI 74 (352)
T ss_dssp CCEEEECCCTTCCGGGSGGGGGG--TTSEEEECCS--CCCSHHHHHHHTTT-CSEEEECTTSSCBCHHHHTTCTTC--CE
T ss_pred ceEEEEEcCccccchhhhhhhhh--cCceEEEecC--CCCCHHHHHHHhcC-CeEEEEeCCCCCCCHHHHhhCCCC--eE
Confidence 48899987765421 11333 3467776543 22478899998874 999998 56788999999999988 99
Q ss_pred EEEcccCc----cccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCC-------CCCCcc
Q 016162 90 FSNMAVGY----NNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDG-------WLPNLF 158 (394)
Q Consensus 90 I~~~g~G~----d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~-------w~~~~~ 158 (394)
|++.|+|+ |+||+++|+++||.|+|+||+ +.+||||++++||+++|++..+++.+++|.|.. |.+...
T Consensus 75 I~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~ 153 (352)
T 3gg9_A 75 ISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFG 153 (352)
T ss_dssp EEESSCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTT
T ss_pred EEEeCcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccc
Confidence 99999999 999999999999999999999 999999999999999999999999999999853 333334
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
.|++++|+||||||+|+||+++|+++ ++|||+|++|||+...... ...| +....++++++++||
T Consensus 154 ~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~----------~~~g-----~~~~~~l~ell~~aD 217 (352)
T 3gg9_A 154 IGRVLKGQTLGIFGYGKIGQLVAGYG-RAFGMNVLVWGRENSKERA----------RADG-----FAVAESKDALFEQSD 217 (352)
T ss_dssp SBCCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSHHHHHHH----------HHTT-----CEECSSHHHHHHHCS
T ss_pred cCccCCCCEEEEEeECHHHHHHHHHH-HhCCCEEEEECCCCCHHHH----------HhcC-----ceEeCCHHHHHhhCC
Confidence 67899999999999999999999997 8999999999998643211 1112 123358999999999
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccccCCceEE
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIV 317 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~~~~nvil 317 (394)
+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|++||+++|++|+++||+||||++||++ ++|||++|||++
T Consensus 218 iV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvil 297 (352)
T 3gg9_A 218 VLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCIC 297 (352)
T ss_dssp EEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEE
T ss_pred EEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999986 579999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 318 VPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
|||+|+.|.++++++...+++|+.+|++|+|+ |.||
T Consensus 298 TPHia~~t~e~~~~~~~~~~~ni~~~~~G~p~-~~Vn 333 (352)
T 3gg9_A 298 TPHIGYVERESYEMYFGIAFQNILDILQGNVD-SVAN 333 (352)
T ss_dssp CCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCT-TBSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-cccC
Confidence 99999999999999999999999999999875 7886
No 10
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=6.6e-66 Score=506.06 Aligned_cols=307 Identities=20% Similarity=0.230 Sum_probs=267.0
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHH-HHhcccCCcEEEEc
Q 016162 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLF-AALSRAGGKAFSNM 93 (394)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l-~~l~~l~~k~I~~~ 93 (394)
++|||++.++++ ++.+.|++.++++++....+ .+.+++ . ++|+++++.. .+ ++++ +++|+| |+|++.
T Consensus 1 m~kil~~~~~~~-~~~~~L~~~~~~~~~~~~~~--~~~~~~----~-~ad~l~~~~~-~~-~~~l~~~~~~L--k~I~~~ 68 (324)
T 3evt_A 1 MSLVLMAQATKP-EQLQQLQTTYPDWTFKDAAA--VTAADY----D-QIEVMYGNHP-LL-KTILARPTNQL--KFVQVI 68 (324)
T ss_dssp -CEEEECSCCCH-HHHHHHHHHCTTCEEEETTS--CCTTTG----G-GEEEEESCCT-HH-HHHHHSTTCCC--CEEECS
T ss_pred CcEEEEecCCCH-HHHHHHHhhCCCeEEecCCc--cChHHh----C-CcEEEEECCc-Ch-HHHHHhhCCCc--eEEEEC
Confidence 368999999987 47889988776655543221 233333 3 4898887754 46 8888 689988 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHH-HHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA-DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~-~~~~~~g~~~~w~~~~~~g~~l~gktvGIIG 172 (394)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+ ++.+++|.|.. .. .+++++|+||||||
T Consensus 69 ~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~---~~-~~~~l~gktvGIiG 144 (324)
T 3evt_A 69 SAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWAL---PM-TTSTLTGQQLLIYG 144 (324)
T ss_dssp SSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSC---SS-CCCCSTTCEEEEEC
T ss_pred CccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCccc---CC-CCccccCCeEEEEC
Confidence 999999999999999999999999999999999999999999999999 88999998643 22 47899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhh
Q 016162 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (394)
Q Consensus 173 lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~ 252 (394)
+|+||+++|+++ ++|||+|++|||+..... .. .. .....++++++++||+|++|+|+|++|++
T Consensus 145 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~~-~~-~~~~~~l~ell~~aDvV~l~lPlt~~t~~ 207 (324)
T 3evt_A 145 TGQIGQSLAAKA-SALGMHVIGVNTTGHPAD--------------HF-HE-TVAFTATADALATANFIVNALPLTPTTHH 207 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEEESSCCCCT--------------TC-SE-EEEGGGCHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HhCCCEEEEECCCcchhH--------------hH-hh-ccccCCHHHHHhhCCEEEEcCCCchHHHH
Confidence 999999999997 899999999999864310 00 00 12245899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CccccCCceEEcCCCCCCcHHHHHH
Q 016162 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWTREG 331 (394)
Q Consensus 253 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t~~~~~~ 331 (394)
+|+++.|+.||+|++|||+|||+++|++||++||++|++.||+||||++||++. +|||++|||++|||+||.|.+++++
T Consensus 208 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~ 287 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRAT 287 (324)
T ss_dssp CBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHH
T ss_pred hcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999864 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC-CCCCCCCC
Q 016162 332 MATLAALNVLGKIKG-YPIWGNPN 354 (394)
Q Consensus 332 ~~~~~~~ni~~~l~g-~~~~~~v~ 354 (394)
+...+++|+.+|++| +++.|.||
T Consensus 288 ~~~~~~~nl~~~l~~~~~~~n~V~ 311 (324)
T 3evt_A 288 VFPIFAANFAQFVKDGTLVRNQVD 311 (324)
T ss_dssp HHHHHHHHHHHHHHHSCCCSCBCC
T ss_pred HHHHHHHHHHHHHhCCCCCCceEC
Confidence 999999999999965 56899997
No 11
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=4e-66 Score=509.95 Aligned_cols=311 Identities=29% Similarity=0.370 Sum_probs=271.0
Q ss_pred eEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEcc
Q 016162 16 YRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (394)
Q Consensus 16 ~~vlv~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g 94 (394)
|||++...-+. .++++.+.+ .+++++... ...+|+.+.+. ++|+++++..+++++++++++|+| |+|++.|
T Consensus 1 Mki~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~e~~~~~~-~~d~li~~~~~~i~~~~l~~~~~L--k~I~~~~ 72 (334)
T 2pi1_A 1 MNVLFTSVPQEDVPFYQEALK-DLSLKIYTT----DVSKVPENELK-KAELISVFVYDKLTEELLSKMPRL--KLIHTRS 72 (334)
T ss_dssp CEEEECSCCTTHHHHHHHHTT-TSEEEECSS----CGGGSCHHHHH-HCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CEEEEEccChhhHHHHHHHhh-cCCEEEECC----CCcHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECC
Confidence 47777544332 235555533 346665322 12456777777 499999987889999999999998 9999999
Q ss_pred cCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC
Q 016162 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (394)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG 174 (394)
+|+||||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|. |.. ...|++|+|+||||||+|
T Consensus 73 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~tvgIiG~G 150 (334)
T 2pi1_A 73 VGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFS-QDS-EILARELNRLTLGVIGTG 150 (334)
T ss_dssp SCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCG-GGCBCCGGGSEEEEECCS
T ss_pred ccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCc-ccc-CccceeccCceEEEECcC
Confidence 999999999999999999999999999999999999999999999999999999975 431 235789999999999999
Q ss_pred hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcc
Q 016162 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (394)
Q Consensus 175 ~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li 254 (394)
+||+++|+++ ++|||+|++|||+......+ .+ . ...++++++++||+|++|+|+|++|+++|
T Consensus 151 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~-----------~g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~li 212 (334)
T 2pi1_A 151 RIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------KG-----C-VYTSLDELLKESDVISLHVPYTKETHHMI 212 (334)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------TT-----C-EECCHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred HHHHHHHHHH-HHCcCEEEEECCCcchhhHh-----------cC-----c-eecCHHHHHhhCCEEEEeCCCChHHHHhh
Confidence 9999999997 89999999999987653211 11 1 23579999999999999999999999999
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC----------------CCCccccCCceEEc
Q 016162 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY----------------MKPGLSEMKNAIVV 318 (394)
Q Consensus 255 ~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~----------------~~~~L~~~~nvilT 318 (394)
+++.|+.||+|++|||+|||+++|++||++||++|++.||+||||++||+ .++|||++|||++|
T Consensus 213 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilT 292 (334)
T 2pi1_A 213 NEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIIT 292 (334)
T ss_dssp CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEEC
T ss_pred CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999997 24689999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 319 PHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
||+|++|.++++++...+++|+.+|++|+++.|.||
T Consensus 293 PHia~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~Vn 328 (334)
T 2pi1_A 293 PHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGN 328 (334)
T ss_dssp CSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGG
T ss_pred CccccChHHHHHHHHHHHHHHHHHHHcCCCCCceEC
Confidence 999999999999999999999999999999999997
No 12
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.9e-65 Score=507.66 Aligned_cols=312 Identities=21% Similarity=0.240 Sum_probs=269.9
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecC--CccccHHHHHHhcccCCcEEEEc
Q 016162 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFSNM 93 (394)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~--~~~i~~~~l~~l~~l~~k~I~~~ 93 (394)
+++|....... ...+.|++.|+++.+..... .+.+++.+.+.+ +|++|++. +..+++++++++|+| |+|++.
T Consensus 20 ~~~lg~~~~~l-~~~~~L~~~g~ev~~~~~~~--~~~~~~~~~~~~-ad~li~~~~~~~~~~~~~l~~~p~L--k~i~~~ 93 (351)
T 3jtm_A 20 PNFLGCVENAL-GIRDWLESQGHQYIVTDDKE--GPDCELEKHIPD-LHVLISTPFHPAYVTAERIKKAKNL--KLLLTA 93 (351)
T ss_dssp TTCCSSTTTGG-GCHHHHHHTTCEEEEESCCS--STTSHHHHHTTT-CSEEEECTTSCCCBCHHHHHHCSSC--CEEEES
T ss_pred CCEEEeccchH-HHHHHHHHCCCEEEEeCCCC--CCHHHHHHHhCC-CEEEEEccCCCCCCCHHHHhhCCCC--eEEEEe
Confidence 44555544433 24677888899987665433 255688888874 99999865 356999999999988 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGl 173 (394)
|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|++..+++.+++|.|... .....+.+|+|+||||||+
T Consensus 94 g~G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~-~~~~~~~~l~gktvGIIG~ 172 (351)
T 3jtm_A 94 GIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVA-GIAYRAYDLEGKTIGTVGA 172 (351)
T ss_dssp SSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHH-HHHTTCCCSTTCEEEEECC
T ss_pred CeeecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccc-cccCCcccccCCEEeEEEe
Confidence 999999999999999999999999999999999999999999999999999999986421 1112467999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhc
Q 016162 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (394)
Q Consensus 174 G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~l 253 (394)
|+||+.+|+++ ++|||+|++|||+....... . ..| +....++++++++||+|++|+|+|++|+++
T Consensus 173 G~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~~--~-------~~g-----~~~~~~l~ell~~aDvV~l~~Plt~~t~~l 237 (351)
T 3jtm_A 173 GRIGKLLLQRL-KPFGCNLLYHDRLQMAPELE--K-------ETG-----AKFVEDLNEMLPKCDVIVINMPLTEKTRGM 237 (351)
T ss_dssp SHHHHHHHHHH-GGGCCEEEEECSSCCCHHHH--H-------HHC-----CEECSCHHHHGGGCSEEEECSCCCTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEeCCCccCHHHH--H-------hCC-----CeEcCCHHHHHhcCCEEEECCCCCHHHHHh
Confidence 99999999997 89999999999986332110 1 112 123468999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CccccCCceEEcCCCCCCcHHHHHHH
Q 016162 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWTREGM 332 (394)
Q Consensus 254 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t~~~~~~~ 332 (394)
|+++.|+.||+|++|||+|||+++|++||++||++|++.||+||||++||++. +|||++|||++|||+||.|.+++.++
T Consensus 238 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~ 317 (351)
T 3jtm_A 238 FNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRY 317 (351)
T ss_dssp BSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHH
T ss_pred hcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999864 69999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCC
Q 016162 333 ATLAALNVLGKIKGYPI 349 (394)
Q Consensus 333 ~~~~~~ni~~~l~g~~~ 349 (394)
...+++|+.+|++|+++
T Consensus 318 ~~~~~~nl~~~~~g~~~ 334 (351)
T 3jtm_A 318 AAGTKDMLERYFKGEDF 334 (351)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 99999999999999963
No 13
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-64 Score=495.96 Aligned_cols=311 Identities=29% Similarity=0.444 Sum_probs=270.3
Q ss_pred CCceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEE
Q 016162 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (394)
Q Consensus 13 ~~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~ 92 (394)
++++||++++++++. ..+.|++.++++.... ..+++++.+.+. ++|+++++..+++++++++++|+| |+|++
T Consensus 24 ~~~~~vli~~~~~~~-~~~~l~~~~~~v~~~~----~~~~~~~~~~~~-~~d~li~~~~~~~~~~~l~~~~~L--k~I~~ 95 (335)
T 2g76_A 24 ANLRKVLISDSLDPC-CRKILQDGGLQVVEKQ----NLSKEELIAELQ-DCEGLIVRSATKVTADVINAAEKL--QVVGR 95 (335)
T ss_dssp --CCEEEECSCCCHH-HHHHHHHHTCEEEECC----SCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCSSC--CEEEE
T ss_pred ccceEEEEcCCCCHH-HHHHHHhCCCEEEECC----CCCHHHHHHHhc-CceEEEEcCCCCCCHHHHhhCCCC--cEEEE
Confidence 344689999888763 5677777777765432 247889988887 499999988778999999999988 99999
Q ss_pred cccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016162 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (394)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIG 172 (394)
.|+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|. +..+.|.+++|+||||||
T Consensus 96 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~---~~~~~~~~l~g~tvgIIG 172 (335)
T 2g76_A 96 AGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWE---RKKFMGTELNGKTLGILG 172 (335)
T ss_dssp SSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC---TGGGCBCCCTTCEEEEEC
T ss_pred CCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCC---ccCCCCcCCCcCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999864 333457899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhh
Q 016162 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (394)
Q Consensus 173 lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~ 252 (394)
+|+||+.+|+++ ++|||+|++|||+...... . ..|. ...++++++++||+|++|+|++++|++
T Consensus 173 lG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~---~-------~~g~------~~~~l~ell~~aDvV~l~~P~t~~t~~ 235 (335)
T 2g76_A 173 LGRIGREVATRM-QSFGMKTIGYDPIISPEVS---A-------SFGV------QQLPLEEIWPLCDFITVHTPLLPSTTG 235 (335)
T ss_dssp CSHHHHHHHHHH-HTTTCEEEEECSSSCHHHH---H-------HTTC------EECCHHHHGGGCSEEEECCCCCTTTTT
T ss_pred ECHHHHHHHHHH-HHCCCEEEEECCCcchhhh---h-------hcCc------eeCCHHHHHhcCCEEEEecCCCHHHHH
Confidence 999999999997 7999999999998754211 1 1121 125899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHHHH
Q 016162 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGM 332 (394)
Q Consensus 253 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~ 332 (394)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||+.||.+++|||++||||+|||++++|.++++++
T Consensus 236 li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~ 315 (335)
T 2g76_A 236 LLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRC 315 (335)
T ss_dssp SBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHH
T ss_pred hhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977789999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCC
Q 016162 333 ATLAALNVLGKIKGYPIWG 351 (394)
Q Consensus 333 ~~~~~~ni~~~l~g~~~~~ 351 (394)
...+++|+.+|++|+++.|
T Consensus 316 ~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 316 GEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHcCCCCCC
Confidence 9999999999999998765
No 14
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=1.6e-64 Score=502.53 Aligned_cols=312 Identities=22% Similarity=0.309 Sum_probs=261.5
Q ss_pred ceEEEEeCCCCc-------hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCC
Q 016162 15 KYRVVSTKPMPG-------TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGG 87 (394)
Q Consensus 15 ~~~vlv~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~ 87 (394)
..++++..+.+. ++..+.|++. +++... . ..+++|+.+.+.++++++++. +++++++++++|+|
T Consensus 27 ~r~ivll~~~~~~~~~~~~~~~~~~L~~~-~~v~~~-~---~~~~~e~~~~~~~~~~~i~~~--~~i~~~~l~~~p~L-- 97 (365)
T 4hy3_A 27 ERPLAISAPEPRSLDLIFSDEARAALHSK-YEIVEA-D---PENIAGLGDDILGRARYIIGQ--PPLSAETLARMPAL-- 97 (365)
T ss_dssp -CCEEEEECTTSCHHHHCCHHHHHHHHHH-SEEEEC-C---GGGGGGSCTTHHHHEEEEEEC--CCCCHHHHTTCTTC--
T ss_pred CCCEEEEcCCcccccccCCHHHHHHHhCC-cEEEEC-C---CCChHHHHHHhhCCeEEEEeC--CCCCHHHHhhCCCC--
Confidence 345666655532 2245677665 566422 1 124455443322247777753 57999999999998
Q ss_pred cEEEEc-ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCC-cccccccCC
Q 016162 88 KAFSNM-AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPN-LFVGNLLKG 165 (394)
Q Consensus 88 k~I~~~-g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~-~~~g~~l~g 165 (394)
|+|++. |+|+||||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|. |... .+.+.+++|
T Consensus 98 k~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~-w~~~~~~~~~~l~g 176 (365)
T 4hy3_A 98 RSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTEL-WGGEGNASARLIAG 176 (365)
T ss_dssp CEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCC-CSSSSTTSCCCSSS
T ss_pred eEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCcc-ccccccccccccCC
Confidence 999975 8999999999999999999999999999999999999999999999999999999975 6432 346789999
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
+||||||+|+||+.+|+++ ++|||+|++|||+....... ..|. ...++++++++||+|++|+|
T Consensus 177 ktvGIIGlG~IG~~vA~~l-~~fG~~V~~~d~~~~~~~~~----------~~g~------~~~~l~ell~~aDvV~l~~P 239 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVL-SGFRARIRVFDPWLPRSMLE----------ENGV------EPASLEDVLTKSDFIFVVAA 239 (365)
T ss_dssp SEEEEECCSHHHHHHHHHH-TTSCCEEEEECSSSCHHHHH----------HTTC------EECCHHHHHHSCSEEEECSC
T ss_pred CEEEEecCCcccHHHHHhh-hhCCCEEEEECCCCCHHHHh----------hcCe------eeCCHHHHHhcCCEEEEcCc
Confidence 9999999999999999997 89999999999986432111 1121 23689999999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccccCCceEEcCCCCCC
Q 016162 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASA 324 (394)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~ 324 (394)
++++|+++|+++.|+.||+|++|||+|||++||++||++||++|+|+ |+||||++||++ ++|||++|||++|||+||+
T Consensus 240 lt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~ 318 (365)
T 4hy3_A 240 VTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGA 318 (365)
T ss_dssp SSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSC
T ss_pred CCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccC
Confidence 99999999999999999999999999999999999999999999998 999999999986 4799999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 325 SKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 325 t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
|.++++++...+++||.+|++|+++.+.+|
T Consensus 319 t~e~~~~~~~~~~~ni~~~~~G~~~~~~vn 348 (365)
T 4hy3_A 319 LDSAFKKMGDMVLEDMDLMDRGLPPMRCKR 348 (365)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCCCSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 999999999999999999999999999887
No 15
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=5.6e-63 Score=483.39 Aligned_cols=309 Identities=38% Similarity=0.575 Sum_probs=277.0
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEccc
Q 016162 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (394)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g~ 95 (394)
+|||++.+++++ ..+.|++.++++++.... ..+.+++.+.+. ++|+++++..+++++++++++|+| |+|++.|+
T Consensus 1 ~~vl~~~~~~~~-~~~~l~~~g~~v~~~~~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~i~~~~~ 74 (311)
T 2cuk_A 1 MRVLVTRTLPGK-ALDRLRERGLEVEVHRGL--FLPKAELLKRVE-GAVGLIPTVEDRIDAEVMDRAKGL--KVIACYSV 74 (311)
T ss_dssp CEEEESSCCSSS-TTHHHHHTTCEEEECCSS--CCCHHHHHHHHT-TCSEEECCTTSCBCHHHHHHSTTC--CEEECSSS
T ss_pred CEEEEeCCCCHH-HHHHHHhcCCeEEEecCC--CCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECCc
Confidence 478888887764 467787777787654322 347889988887 499999887778999999999988 99999999
Q ss_pred CccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh
Q 016162 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (394)
Q Consensus 96 G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~ 175 (394)
|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.+..+.|.+++|+||||||+|+
T Consensus 75 G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~ 154 (311)
T 2cuk_A 75 GVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGR 154 (311)
T ss_dssp CCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSH
T ss_pred CccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECH
Confidence 99999999999999999999999999999999999999999999999999999987664433457899999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhccc
Q 016162 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (394)
Q Consensus 176 IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~ 255 (394)
||+.+|+++ ++|||+|++|||+.... . . ...++++++++||+|++|+|++++|+++++
T Consensus 155 IG~~~A~~l-~~~G~~V~~~d~~~~~~----------------~--~---~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 155 IGQAVAKRA-LAFGMRVVYHARTPKPL----------------P--Y---PFLSLEELLKEADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCSS----------------S--S---CBCCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCCccc----------------c--c---ccCCHHHHHhhCCEEEEeCCCChHHHhhcC
Confidence 999999997 79999999999986431 0 1 246899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccccCCceEEcCCCCCCcHHHHHHHHH
Q 016162 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREGMAT 334 (394)
Q Consensus 256 ~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~~~~~~~~~ 334 (394)
++.|+.||+|+++||+|||+++|+++|+++|+ |++.||++|||+.||++ ++|||++||||+|||+++.|.+++.++..
T Consensus 213 ~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~ 291 (311)
T 2cuk_A 213 RERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAE 291 (311)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999965 57999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCC
Q 016162 335 LAALNVLGKIKGYPIWGNP 353 (394)
Q Consensus 335 ~~~~ni~~~l~g~~~~~~v 353 (394)
.+++|+.+|++|+++.|.|
T Consensus 292 ~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 292 VAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp HHHHHHHHHHTTCCCSSBC
T ss_pred HHHHHHHHHHcCCCCCCcc
Confidence 9999999999999877654
No 16
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=3.7e-63 Score=489.03 Aligned_cols=313 Identities=28% Similarity=0.405 Sum_probs=268.9
Q ss_pred eEEEEeCCCC-chHHHHHHHhC--CCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEE
Q 016162 16 YRVVSTKPMP-GTRWINLLIEQ--DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (394)
Q Consensus 16 ~~vlv~~~~~-~~~~~~~l~~~--~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~ 92 (394)
|||++....+ +..+++.+.+. ++++.+.... ..+++.+.+. ++|+++++..+++++++++++|+.++|+|++
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 76 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKL----LTPETVALAK-GADGVVVYQQLDYIAETLQALADNGITKMSL 76 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSC----CCTTTGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCC----CcHHHHHHhc-CCcEEEEcCCCCCCHHHHHhccccCCeEEEE
Confidence 4677754322 23466777653 4566543221 2246666666 5999999877789999999999833499999
Q ss_pred cccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016162 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (394)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIG 172 (394)
.|+|+||||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|. |.. ..+.+++|+||||||
T Consensus 77 ~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~--~~~~~l~g~~vgIiG 153 (333)
T 1j4a_A 77 RNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLR-WAP--TIGREVRDQVVGVVG 153 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCC-CTT--CCBCCGGGSEEEEEC
T ss_pred CCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCc-cCC--cccccCCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999985 642 467899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhh
Q 016162 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (394)
Q Consensus 173 lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~ 252 (394)
+|+||+.+|+++ ++|||+|++||++....... . .....++++++++||+|++|+|++++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~------------~-----~~~~~~l~ell~~aDvV~l~~p~~~~t~~ 215 (333)
T 1j4a_A 154 TGHIGQVFMQIM-EGFGAKVITYDIFRNPELEK------------K-----GYYVDSLDDLYKQADVISLHVPDVPANVH 215 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH------------T-----TCBCSCHHHHHHHCSEEEECSCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhHHh------------h-----CeecCCHHHHHhhCCEEEEcCCCcHHHHH
Confidence 999999999997 79999999999987643110 0 01123899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC--CC--------C----ccccCCceEEc
Q 016162 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MK--------P----GLSEMKNAIVV 318 (394)
Q Consensus 253 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~--~~--------~----~L~~~~nvilT 318 (394)
+|+++.|+.||+|+++||+|||+++|+++|+++|++|+++||+||||++||. +. + |||++|||++|
T Consensus 216 li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilT 295 (333)
T 1j4a_A 216 MINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVT 295 (333)
T ss_dssp CBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEEC
T ss_pred HHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999993 22 2 59999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 319 PHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
||+|++|.++++++...+++|+.+|++|+++.|.||
T Consensus 296 PHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 331 (333)
T 1j4a_A 296 PKTAFYTTHAVRNMVVKAFDNNLELVEGKEAETPVK 331 (333)
T ss_dssp SSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBCC
T ss_pred CccccCHHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Confidence 999999999999999999999999999999998886
No 17
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=3.2e-63 Score=489.12 Aligned_cols=313 Identities=21% Similarity=0.285 Sum_probs=270.0
Q ss_pred eEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEE
Q 016162 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (394)
Q Consensus 16 ~~vlv~~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~ 92 (394)
|||+++. +... .+++.+.+ .++++.+... ..+++++.+.+. ++|+++++..+.+++++++++|+.++|+|++
T Consensus 1 mki~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 75 (331)
T 1xdw_A 1 MKVLCYGVRDVEL-PIFEACNKEFGYDIKCVPD---YLNTKETAEMAA-GFDAVILRGNCFANKQNLDIYKKLGVKYILT 75 (331)
T ss_dssp CEEEECSCCTTTH-HHHHHHGGGTCCEEEECSC---CSCSHHHHHTTT-TCSEEEECTTCCBCHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEecCccCH-HHHHHHHHhcCeEEEECCC---CCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHhhCcccCceEEEE
Confidence 4677754 3333 46677754 4555543221 234577777777 4999999877789999999999833499999
Q ss_pred cccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016162 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (394)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIG 172 (394)
.|+|+||||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. |.. ...|.++.|+||||||
T Consensus 76 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 153 (331)
T 1xdw_A 76 RTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFK-VDA-FMFSKEVRNCTVGVVG 153 (331)
T ss_dssp SSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCS-TTCCCCGGGSEEEEEC
T ss_pred ccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCc-ccc-CcCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999985 522 2357899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhh
Q 016162 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (394)
Q Consensus 173 lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~ 252 (394)
+|+||+.+|+++ ++|||+|++|||+.....+ .. ....++++++++||+|++|+|++++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~-------------~~-----~~~~~l~ell~~aDvV~~~~p~t~~t~~ 214 (331)
T 1xdw_A 154 LGRIGRVAAQIF-HGMGATVIGEDVFEIKGIE-------------DY-----CTQVSLDEVLEKSDIITIHAPYIKENGA 214 (331)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCCSCT-------------TT-----CEECCHHHHHHHCSEEEECCCCCTTTCC
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCccHHHH-------------hc-----cccCCHHHHHhhCCEEEEecCCchHHHH
Confidence 999999999997 7999999999998753100 00 1235899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC--CC--------C----ccccC-CceEE
Q 016162 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MK--------P----GLSEM-KNAIV 317 (394)
Q Consensus 253 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~--~~--------~----~L~~~-~nvil 317 (394)
+|+++.|+.||+|+++||+|||+++|+++|+++|++|+++||+||||++||+ +. + |||++ |||++
T Consensus 215 li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvil 294 (331)
T 1xdw_A 215 VVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLI 294 (331)
T ss_dssp SBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEE
T ss_pred HhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999994 21 2 69999 99999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 318 VPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
|||+|++|.+++.++...+++|+.+|++|+++.|.||
T Consensus 295 TPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 331 (331)
T 1xdw_A 295 TPHLGSYTDEAVKNMVEVSYQNLKDLAETGDCPNKIK 331 (331)
T ss_dssp CCSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTBCC
T ss_pred cCccccChHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999999999999888775
No 18
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3.8e-62 Score=479.32 Aligned_cols=312 Identities=28% Similarity=0.471 Sum_probs=274.2
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcc-cCCcEEEEcc
Q 016162 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSR-AGGKAFSNMA 94 (394)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~-l~~k~I~~~g 94 (394)
+||+++.+++++ ..+.|++ .+++++... ....+++++.+.+.+ +|+++++..+.+++++++++|+ | |+|++.|
T Consensus 2 ~~vl~~~~~~~~-~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~d~~i~~~~~~~~~~~l~~~~~~L--k~I~~~~ 75 (320)
T 1gdh_A 2 KKILITWPLPEA-AMARARE-SYDVIAHGD-DPKITIDEMIETAKS-VDALLITLNEKCRKEVIDRIPENI--KCISTYS 75 (320)
T ss_dssp CEEEESSCCCHH-HHHHHHT-TSEEEECCS-TTCCCHHHHHHHHTT-CSEEEEETTSCBCHHHHHHSCTTC--CEEEEES
T ss_pred cEEEEcCCCCHH-HHHHHHh-cCCEEEecC-CCCCCHHHHHHHhcC-CEEEEECCCCCCCHHHHHhCCccc--eEEEECC
Confidence 478888887764 5677765 356654332 223578899988874 9999998777899999999998 7 9999999
Q ss_pred cCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC
Q 016162 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (394)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG 174 (394)
+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.+..+.|.+++|+||||||+|
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G 155 (320)
T 1gdh_A 76 IGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFG 155 (320)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS
T ss_pred cccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcC
Confidence 99999999999999999999999999999999999999999999999999999998766544456789999999999999
Q ss_pred hHHHHHHHHHHhcCCcEEEEEcC-chhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhc
Q 016162 175 RIGSAYARMMVEGFKMNLIYYDL-YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (394)
Q Consensus 175 ~IG~~vA~~la~~~G~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~l 253 (394)
+||+.+|+++ ++|||+|++||+ +....... . .|. ....++++++++||+|++|+|++++|+++
T Consensus 156 ~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~~---~-------~g~-----~~~~~l~ell~~aDvVil~~p~~~~t~~~ 219 (320)
T 1gdh_A 156 SIGQALAKRA-QGFDMDIDYFDTHRASSSDEA---S-------YQA-----TFHDSLDSLLSVSQFFSLNAPSTPETRYF 219 (320)
T ss_dssp HHHHHHHHHH-HTTTCEEEEECSSCCCHHHHH---H-------HTC-----EECSSHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCCcChhhhh---h-------cCc-----EEcCCHHHHHhhCCEEEEeccCchHHHhh
Confidence 9999999997 799999999999 76542111 1 111 12348999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHHHHH
Q 016162 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMA 333 (394)
Q Consensus 254 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~~ 333 (394)
++++.|+.||+|+++||+|||+++|+++|.++|++|++.||++|||+.||.+++|||++||||+|||++++|.+++.++.
T Consensus 220 i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 220 FNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHHH
T ss_pred cCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999556799999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCC
Q 016162 334 TLAALNVLGKIKGYPIW 350 (394)
Q Consensus 334 ~~~~~ni~~~l~g~~~~ 350 (394)
..+ +|+.+|++|+++.
T Consensus 300 ~~~-~nl~~~~~g~~~~ 315 (320)
T 1gdh_A 300 HQA-NDLIDALFGGADM 315 (320)
T ss_dssp HHH-HHHHHHHHTTSCC
T ss_pred HHH-HHHHHHHcCCCCc
Confidence 999 9999999998764
No 19
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=1.8e-62 Score=511.56 Aligned_cols=344 Identities=28% Similarity=0.356 Sum_probs=304.6
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEcc
Q 016162 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (394)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g 94 (394)
++|||+++++++. ..+.|++. +++++.. ..+++++.+.+.+ +|++++++.+++++++++++|+| |+|++.|
T Consensus 4 ~~~vl~~~~~~~~-~~~~l~~~-~~v~~~~----~~~~~~~~~~~~~-~d~li~~~~~~~~~~~l~~~~~L--k~i~~~~ 74 (529)
T 1ygy_A 4 LPVVLIADKLAPS-TVAALGDQ-VEVRWVD----GPDRDKLLAAVPE-ADALLVRSATTVDAEVLAAAPKL--KIVARAG 74 (529)
T ss_dssp CCEEEECSSCCGG-GGTTSCSS-SEEEECC----TTSHHHHHHHGGG-CSEEEECSSSCBCHHHHHTCTTC--CEEEESS
T ss_pred CcEEEEeCCCCHH-HHHHHhcC-ceEEEcC----CCCHHHHHHHhcC-CEEEEEcCCCCCCHHHHhhCCCC--cEEEECC
Confidence 4688888888763 45666554 6665432 2478899988884 99999998889999999999988 9999999
Q ss_pred cCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC
Q 016162 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (394)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG 174 (394)
+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|.|. +..+.|.+++|+|+||||+|
T Consensus 75 ~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~---~~~~~~~~l~g~~vgIIG~G 151 (529)
T 1ygy_A 75 VGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWK---RSSFSGTEIFGKTVGVVGLG 151 (529)
T ss_dssp SCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCC---GGGCCBCCCTTCEEEEECCS
T ss_pred cCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCc---ccCcCccccCCCEEEEEeeC
Confidence 999999999999999999999999999999999999999999999999999999864 33456789999999999999
Q ss_pred hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcc
Q 016162 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (394)
Q Consensus 175 ~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li 254 (394)
+||+++|+++ +++||+|++|||+...... .. .|. .. .++++++++||+|++|+|++++|.+++
T Consensus 152 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~a---~~-------~g~-----~~-~~l~e~~~~aDvV~l~~P~~~~t~~~i 214 (529)
T 1ygy_A 152 RIGQLVAQRI-AAFGAYVVAYDPYVSPARA---AQ-------LGI-----EL-LSLDDLLARADFISVHLPKTPETAGLI 214 (529)
T ss_dssp HHHHHHHHHH-HTTTCEEEEECTTSCHHHH---HH-------HTC-----EE-CCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred HHHHHHHHHH-HhCCCEEEEECCCCChhHH---Hh-------cCc-----EE-cCHHHHHhcCCEEEECCCCchHHHHHh
Confidence 9999999997 7999999999998743211 11 121 12 389999999999999999999999999
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHHHHHH
Q 016162 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMAT 334 (394)
Q Consensus 255 ~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~~~ 334 (394)
+++.++.||+|+++||+|||+++|+++|+++|++|+++||++|||+.||.+++|||+++|+++|||++++|.++++++..
T Consensus 215 ~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~ 294 (529)
T 1ygy_A 215 DKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGT 294 (529)
T ss_dssp CHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHH
T ss_pred CHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCccCcccCCCCCCCcCCCchhhHHHHHHHhhhccccCCC
Q 016162 335 LAALNVLGKIKGYPIWGNPNQVEPFLNENAQPPAASPSIVNSKVCRFQGFKLSAASPH 392 (394)
Q Consensus 335 ~~~~ni~~~l~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (394)
.+++|+.+++.|++..|.|| + |. + +.++.++||+.+++++|.++.||+.+.+.
T Consensus 295 ~~~~~l~~~l~~~~~~~~v~-~-~~--~-~~hd~i~P~l~La~~lg~~~~qla~g~~~ 347 (529)
T 1ygy_A 295 DVAESVRLALAGEFVPDAVN-V-GG--G-VVNEEVAPWLDLVRKLGVLAGVLSDELPV 347 (529)
T ss_dssp HHHHHHHHHHTTCCCTTBCS-C-CS--T-TSCTTTTTHHHHHHHHHHHHHHTSSSCCS
T ss_pred HHHHHHHHHHcCCCCCcccC-C-cc--c-ccchhhhhHHHHHHHHHHHHHHHhCCCce
Confidence 99999999999999999997 4 32 2 47789999999999999999999877654
No 20
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.6e-63 Score=491.65 Aligned_cols=312 Identities=25% Similarity=0.372 Sum_probs=268.5
Q ss_pred eEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEE
Q 016162 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (394)
Q Consensus 16 ~~vlv~~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~ 92 (394)
|||++.. +.. ..+++.+.+ .++++.+.... ..+++.+.+. ++|+++++..+++++++++++|+.++|+|++
T Consensus 1 Mkil~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 74 (333)
T 1dxy_A 1 MKIIAYGARVDE-IQYFKQWAKDTGNTLEYHTEF----LDENTVEWAK-GFDGINSLQTTPYAAGVFEKMHAYGIKFLTI 74 (333)
T ss_dssp CEEEECSCCTTT-HHHHHHHHHHHCCEEEECSSC----CCTTGGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEeccccC-HHHHHHHHHhCCeEEEEcCCC----ChHHHHHHhc-CCeEEEEcCCCCCCHHHHHhCcccCceEEEE
Confidence 4677753 333 345666644 46666543321 2245666666 5999999877789999999999833399999
Q ss_pred cccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016162 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (394)
Q Consensus 93 ~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIG 172 (394)
.|+|+||||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|. |.. ...|.+++|+||||||
T Consensus 75 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 152 (333)
T 1dxy_A 75 RNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYE-KAG-TFIGKELGQQTVGVMG 152 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHH-HHT-CCCCCCGGGSEEEEEC
T ss_pred cCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcc-ccc-CCCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999984 511 2357899999999999
Q ss_pred cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhh
Q 016162 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (394)
Q Consensus 173 lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~ 252 (394)
+|+||+.+|+++ ++|||+|++|||+...... . . . ...++++++++||+|++|+|++++|++
T Consensus 153 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~--------------~--~-~-~~~~l~ell~~aDvV~~~~P~~~~t~~ 213 (333)
T 1dxy_A 153 TGHIGQVAIKLF-KGFGAKVIAYDPYPMKGDH--------------P--D-F-DYVSLEDLFKQSDVIDLHVPGIEQNTH 213 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCSSCC--------------T--T-C-EECCHHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhhH--------------h--c-c-ccCCHHHHHhcCCEEEEcCCCchhHHH
Confidence 999999999997 7999999999998753100 0 0 1 235899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC-----------CC---CccccCCceEEc
Q 016162 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-----------MK---PGLSEMKNAIVV 318 (394)
Q Consensus 253 li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~-----------~~---~~L~~~~nvilT 318 (394)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||+ ++ +|||++|||++|
T Consensus 214 li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~T 293 (333)
T 1dxy_A 214 IINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLS 293 (333)
T ss_dssp SBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEEC
T ss_pred HhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999983 22 379999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 319 PHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
||+|++|.+++.++...+++|+.+|++|+++.|.||
T Consensus 294 PHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~ 329 (333)
T 1dxy_A 294 PHIAYYTETAVHNMVYFSLQHLVDFLTKGETSTEVT 329 (333)
T ss_dssp SSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTEEC
T ss_pred CccccChHHHHHHHHHHHHHHHHHHHcCCCCCceeC
Confidence 999999999999999999999999999999999886
No 21
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.1e-62 Score=478.55 Aligned_cols=305 Identities=33% Similarity=0.540 Sum_probs=269.3
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEc
Q 016162 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (394)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~ 93 (394)
++|||+++.++++ ...+.|++.++++.. .. ..+++++.+.+. ++|+++++..+++++++++++|+| |+|++.
T Consensus 2 ~~~~il~~~~~~~-~~~~~l~~~~~~~~~--~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~ 73 (307)
T 1wwk_A 2 KRMKVLVAAPLHE-KAIQVLKDAGLEVIY--EE--YPDEDRLVELVK-DVEAIIVRSKPKVTRRVIESAPKL--KVIARA 73 (307)
T ss_dssp --CEEEECSCCCH-HHHHHHHHTTCEEEE--CS--SCCHHHHHHHST-TCSEEEESSCSCBCHHHHTTCTTC--CEEEES
T ss_pred CceEEEEeCCCCH-HHHHHHHhCCeEEEe--CC--CCCHHHHHHHhc-CCEEEEEcCCCCCCHHHHhhCCCC--eEEEEC
Confidence 3578999888776 357788777766642 11 247788888887 599999887767999999999988 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGl 173 (394)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. +..+.|.+++|+||||||+
T Consensus 74 ~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~---~~~~~~~~l~g~~vgIiG~ 150 (307)
T 1wwk_A 74 GVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWA---KKEAMGIELEGKTIGIIGF 150 (307)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC---TTTCCBCCCTTCEEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC---ccCcCCcccCCceEEEEcc
Confidence 9999999999999999999999999999999999999999999999999999999864 2224578999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhc
Q 016162 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (394)
Q Consensus 174 G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~l 253 (394)
|+||+.+|+++ ++|||+|++|||+...... . ..|. ...++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~-------~~g~------~~~~l~ell~~aDvV~l~~p~~~~t~~l 213 (307)
T 1wwk_A 151 GRIGYQVAKIA-NALGMNILLYDPYPNEERA---K-------EVNG------KFVDLETLLKESDVVTIHVPLVESTYHL 213 (307)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---H-------HTTC------EECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCChhhH---h-------hcCc------cccCHHHHHhhCCEEEEecCCChHHhhh
Confidence 99999999997 7999999999998764211 1 1121 1248999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccccCCceEEcCCCCCCcHHHHHHH
Q 016162 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREGM 332 (394)
Q Consensus 254 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~~~~~~~ 332 (394)
|+++.|+.||+|+++||+|||+++|+++|+++|++|++.||++|||+.||++ ++|||++|||++|||++++|.+++.++
T Consensus 214 i~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 214 INEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp BCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHH
T ss_pred cCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999984 579999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 016162 333 ATLAALNVLGKIKG 346 (394)
Q Consensus 333 ~~~~~~ni~~~l~g 346 (394)
...+++|+.+|++|
T Consensus 294 ~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 294 GVEVAEKVVKILKG 307 (307)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999976
No 22
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.4e-62 Score=479.35 Aligned_cols=306 Identities=26% Similarity=0.440 Sum_probs=273.7
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEc
Q 016162 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (394)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~ 93 (394)
.+|||++++++++ .+.+.|++.++++.. . ...+++++.+.+. ++|+++++..+++++++++++|+| |+|++.
T Consensus 4 ~~mkil~~~~~~~-~~~~~l~~~~~~v~~--~--~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~ 75 (313)
T 2ekl_A 4 YTVKALITDPIDE-ILIKTLREKGIQVDY--M--PEISKEELLNIIG-NYDIIVVRSRTKVTKDVIEKGKKL--KIIARA 75 (313)
T ss_dssp CCCEEEECSCCCH-HHHHHHHHTTCEEEE--C--TTCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCTTC--CEEEEC
T ss_pred cceEEEEECCCCH-HHHHHHHhCCcEEEe--C--CCCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEEc
Confidence 3468999988776 457888887776642 1 1347788888887 499999887778999999999988 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGl 173 (394)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|.|. .+.+.+++|+||||||+
T Consensus 76 ~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~-----~~~~~~l~g~~vgIIG~ 150 (313)
T 2ekl_A 76 GIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFK-----KIEGLELAGKTIGIVGF 150 (313)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC-----CCCCCCCTTCEEEEESC
T ss_pred CCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC-----CCCCCCCCCCEEEEEee
Confidence 9999999999999999999999999999999999999999999999999999999864 23568999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhc
Q 016162 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (394)
Q Consensus 174 G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~l 253 (394)
|+||+.+|+++ ++|||+|++||++...... .. .|. . ..++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~---~~-------~g~-----~-~~~l~ell~~aDvVvl~~P~~~~t~~l 213 (313)
T 2ekl_A 151 GRIGTKVGIIA-NAMGMKVLAYDILDIREKA---EK-------INA-----K-AVSLEELLKNSDVISLHVTVSKDAKPI 213 (313)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HH-------TTC-----E-ECCHHHHHHHCSEEEECCCCCTTSCCS
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCcchhHH---Hh-------cCc-----e-ecCHHHHHhhCCEEEEeccCChHHHHh
Confidence 99999999997 7999999999998765311 11 121 1 248999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCC---ccccCCceEEcCCCCCCcHHHHH
Q 016162 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKP---GLSEMKNAIVVPHIASASKWTRE 330 (394)
Q Consensus 254 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~---~L~~~~nvilTPHia~~t~~~~~ 330 (394)
++++.|+.||+|+++||+|||+++|+++|+++|++|++.||+||||+.||++++ |||++|||++|||++++|.++++
T Consensus 214 i~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~ 293 (313)
T 2ekl_A 214 IDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQK 293 (313)
T ss_dssp BCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHH
T ss_pred hCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHH
Confidence 999999999999999999999999999999999999999999999999999887 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCC
Q 016162 331 GMATLAALNVLGKIKGYPI 349 (394)
Q Consensus 331 ~~~~~~~~ni~~~l~g~~~ 349 (394)
++...+++|+.+|++|+++
T Consensus 294 ~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 294 RVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999886
No 23
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=8.1e-63 Score=494.72 Aligned_cols=317 Identities=21% Similarity=0.211 Sum_probs=270.4
Q ss_pred EEEEeCCC----Cch-HHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecC--CccccHHHHHHhcccCCcE
Q 016162 17 RVVSTKPM----PGT-RWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKA 89 (394)
Q Consensus 17 ~vlv~~~~----~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~--~~~i~~~~l~~l~~l~~k~ 89 (394)
.|+++... +.+ .+.+.|++.++++.+..... .+.+++.+.+. ++|++++.. .+.+++++++++|+| |+
T Consensus 42 ~v~l~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~--~~~~~l~~~l~-~ad~li~~~~~~~~i~~~~l~~~p~L--k~ 116 (393)
T 2nac_A 42 IDFTPGQLLGSVSGELGLRKYLESNGHTLVVTSDKD--GPDSVFERELV-DADVVISQPFWPAYLTPERIAKAKNL--KL 116 (393)
T ss_dssp CSSCTTSCCSBTTTGGGCHHHHHHTTCEEEEESCCS--STTSHHHHHHT-TCSEEEEBTTBCCCBCHHHHHHCTTC--CE
T ss_pred EEEECccccccCchhhHHHHHHHhCCCEEEEecCCC--CCHHHHHHhcc-CCCEEEEcCccCCCCCHHHHhhCCCC--cE
Confidence 34555544 332 23357777887876543321 24467888887 499999864 357999999999988 99
Q ss_pred EEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEE
Q 016162 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (394)
Q Consensus 90 I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvG 169 (394)
|++.|+|+||||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|.. ......+.+|+|+|||
T Consensus 117 I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~-~~~~~~~~~l~gktvG 195 (393)
T 2nac_A 117 ALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNI-ADCVSHAYDLEAMHVG 195 (393)
T ss_dssp EEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH-HHHHTTCCCCTTCEEE
T ss_pred EEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCc-cccccCCccCCCCEEE
Confidence 999999999999999999999999999999999999999999999999999999999998642 1111246799999999
Q ss_pred EEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChh
Q 016162 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (394)
Q Consensus 170 IIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~ 249 (394)
|||+|+||+.+|+++ ++|||+|++||++....... .. .| .....++++++++||+|++|+|++++
T Consensus 196 IIGlG~IG~~vA~~l-~a~G~~V~~~d~~~~~~~~~--~~-------~G-----~~~~~~l~ell~~aDvV~l~~Plt~~ 260 (393)
T 2nac_A 196 TVAAGRIGLAVLRRL-APFDVHLHYTDRHRLPESVE--KE-------LN-----LTWHATREDMYPVCDVVTLNCPLHPE 260 (393)
T ss_dssp EECCSHHHHHHHHHH-GGGTCEEEEECSSCCCHHHH--HH-------HT-----CEECSSHHHHGGGCSEEEECSCCCTT
T ss_pred EEeECHHHHHHHHHH-HhCCCEEEEEcCCccchhhH--hh-------cC-----ceecCCHHHHHhcCCEEEEecCCchH
Confidence 999999999999997 89999999999986432111 11 11 11235899999999999999999999
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccccCCceEEcCCCCCCcHHH
Q 016162 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWT 328 (394)
Q Consensus 250 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~~~ 328 (394)
|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||++ ++|||++|||++|||+|+.|.++
T Consensus 261 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~ 340 (393)
T 2nac_A 261 TEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTA 340 (393)
T ss_dssp TTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHH
T ss_pred HHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHH
Confidence 99999999999999999999999999999999999999999999999999999976 47999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 329 REGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 329 ~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+.++...+++|+.+|++|+++.|.++
T Consensus 341 ~~~~~~~~~~nl~~~~~G~~~~~~~~ 366 (393)
T 2nac_A 341 QARYAAGTREILECFFEGRPIRDEYL 366 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCGGGE
T ss_pred HHHHHHHHHHHHHHHHcCCCCcceeE
Confidence 99999999999999999999998875
No 24
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=4.3e-63 Score=493.75 Aligned_cols=319 Identities=22% Similarity=0.234 Sum_probs=272.1
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecC--CccccHHHHHHhcccCCcEEE
Q 016162 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFS 91 (394)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~--~~~i~~~~l~~l~~l~~k~I~ 91 (394)
++++||+.+...+ ...+.|++.++++.+..... .+.+++.+.+.+ +|++++.. .+.+++++++++|+| |+|+
T Consensus 16 ~~~~vl~~d~~~~-~~~~~l~~~~~~v~~~~~~~--~~~~~~~~~~~~-~d~~i~~~~~~~~~~~~~l~~~~~L--k~I~ 89 (364)
T 2j6i_A 16 DEEKLYGCTENKL-GIANWLKDQGHELITTSDKE--GGNSVLDQHIPD-ADIIITTPFHPAYITKERIDKAKKL--KLVV 89 (364)
T ss_dssp HCTTCTTBTTTGG-GCHHHHHHTTCEEEEESCCS--STTSHHHHHGGG-CSEEEECTTSCCCBCHHHHHHCTTC--CEEE
T ss_pred cCceEEEecCccH-HHHHHHHhCCCEEEEcCCCC--CCHHHHHHHhhC-CeEEEecCcCCCCCCHHHHhhCCCC--eEEE
Confidence 3567877777655 34667777888876544322 245788888874 99999864 346899999999988 9999
Q ss_pred EcccCccccchhHHhhC--CceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEE
Q 016162 92 NMAVGYNNVDVNAANKY--GIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (394)
Q Consensus 92 ~~g~G~d~id~~~a~~~--gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvG 169 (394)
+.|+|+||||+++|+++ ||.|+|+|++++.+||||++++||+++|++..+++.+++|.|.. ......+.+++|+|||
T Consensus 90 ~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~-~~~~~~~~~l~g~tvg 168 (364)
T 2j6i_A 90 VAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEV-AAIAKDAYDIEGKTIA 168 (364)
T ss_dssp ESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH-HHHHTTCCCSTTCEEE
T ss_pred ECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCc-CcccCCcccCCCCEEE
Confidence 99999999999999999 99999999999999999999999999999999999999999741 1111246799999999
Q ss_pred EEecChHHHHHHHHHHhcCCcE-EEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCCh
Q 016162 170 VIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (394)
Q Consensus 170 IIGlG~IG~~vA~~la~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~ 248 (394)
|||+|+||+.+|+++ ++|||+ |++||++....... .. .| .....++++++++||+|++|+|+++
T Consensus 169 IIG~G~IG~~vA~~l-~~~G~~~V~~~d~~~~~~~~~--~~-------~g-----~~~~~~l~ell~~aDvV~l~~P~t~ 233 (364)
T 2j6i_A 169 TIGAGRIGYRVLERL-VPFNPKELLYYDYQALPKDAE--EK-------VG-----ARRVENIEELVAQADIVTVNAPLHA 233 (364)
T ss_dssp EECCSHHHHHHHHHH-GGGCCSEEEEECSSCCCHHHH--HH-------TT-----EEECSSHHHHHHTCSEEEECCCCST
T ss_pred EECcCHHHHHHHHHH-HhCCCcEEEEECCCccchhHH--Hh-------cC-----cEecCCHHHHHhcCCEEEECCCCCh
Confidence 999999999999997 899997 99999876432110 11 11 1223589999999999999999999
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CccccC--C---ceEEcCCCC
Q 016162 249 TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEM--K---NAIVVPHIA 322 (394)
Q Consensus 249 ~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~-~~L~~~--~---nvilTPHia 322 (394)
+|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+++||+||||++||++. +|||.+ | ||++|||+|
T Consensus 234 ~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia 313 (364)
T 2j6i_A 234 GTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYS 313 (364)
T ss_dssp TTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCG
T ss_pred HHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccC
Confidence 9999999999999999999999999999999999999999999999999999999864 799999 9 999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 323 SASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 323 ~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+.|.+++.++...+++|+.+|++|++....+|
T Consensus 314 ~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~~n 345 (364)
T 2j6i_A 314 GTTLDAQTRYAQGTVNILESFFTGKFDYRPQD 345 (364)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHTTCCCCCGGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCc
Confidence 99999999999999999999999995444454
No 25
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=2.2e-62 Score=479.43 Aligned_cols=301 Identities=20% Similarity=0.243 Sum_probs=258.5
Q ss_pred CceEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEE
Q 016162 14 GKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (394)
Q Consensus 14 ~~~~vlv~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~ 92 (394)
+.|||++..+.. ++.|.+.+++..+++++....+ ++ .. ++|+++++. .+++++++ |+| |+|++
T Consensus 2 ~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~-----~~----~~-~ad~~i~~~---~~~~~l~~-~~L--k~I~~ 65 (315)
T 3pp8_A 2 NAMEIIFYHPTFNAAWWVNALEKALPHARVREWKV-----GD----NN-PADYALVWQ---PPVEMLAG-RRL--KAVFV 65 (315)
T ss_dssp CCEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCT-----TC----CS-CCSEEEESS---CCHHHHTT-CCC--SEEEE
T ss_pred CceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCC-----CC----cc-CcEEEEECC---CCHHHhCC-CCc--eEEEE
Confidence 568999987654 3468888887766666544321 11 22 599999874 46899999 988 99999
Q ss_pred cccCcccc-c-hhH---HhhCCceEecCCCC-CchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCC
Q 016162 93 MAVGYNNV-D-VNA---ANKYGIAVGNTPGV-LTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (394)
Q Consensus 93 ~g~G~d~i-d-~~~---a~~~gI~v~n~p~~-~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gk 166 (394)
.|+|+||| | +++ +.++||+|+|+|++ ++.+||||++++||+++|++..+++.+++|.|..+ .+++++|+
T Consensus 66 ~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~ 140 (315)
T 3pp8_A 66 LGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL-----PEYTREEF 140 (315)
T ss_dssp SSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTC
T ss_pred CCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC-----CCCCcCCC
Confidence 99999999 7 887 78899999999986 47999999999999999999999999999996542 46899999
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCC
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPl 246 (394)
||||||+|+||+.+|+++ ++|||+|++|||++... + +.. ......++++++++||+|++|+|+
T Consensus 141 tvGIiG~G~IG~~vA~~l-~~~G~~V~~~dr~~~~~-~-------------~~~--~~~~~~~l~ell~~aDiV~l~~Pl 203 (315)
T 3pp8_A 141 SVGIMGAGVLGAKVAESL-QAWGFPLRCWSRSRKSW-P-------------GVE--SYVGREELRAFLNQTRVLINLLPN 203 (315)
T ss_dssp CEEEECCSHHHHHHHHHH-HTTTCCEEEEESSCCCC-T-------------TCE--EEESHHHHHHHHHTCSEEEECCCC
T ss_pred EEEEEeeCHHHHHHHHHH-HHCCCEEEEEcCCchhh-h-------------hhh--hhcccCCHHHHHhhCCEEEEecCC
Confidence 999999999999999997 89999999999986531 0 000 011125899999999999999999
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CccccCCceEEcCCCCCCc
Q 016162 247 DKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASAS 325 (394)
Q Consensus 247 t~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t 325 (394)
|++|+++|+++.|+.||+|++|||+|||+++|++||++||++|++.||+||||++||++. +|||++|||++|||+|+.|
T Consensus 204 t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t 283 (315)
T 3pp8_A 204 TAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVT 283 (315)
T ss_dssp CGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCC
T ss_pred chhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999999864 7999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 326 KWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 326 ~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
.+ +++...+++|+.+|++|+++.|.||
T Consensus 284 ~~--~~~~~~~~~ni~~~~~G~~~~~~V~ 310 (315)
T 3pp8_A 284 RP--AEAIDYISRTITQLEKGEPVTGQVD 310 (315)
T ss_dssp CH--HHHHHHHHHHHHHHHHTCCCCCBCC
T ss_pred HH--HHHHHHHHHHHHHHHcCCCCCceEC
Confidence 85 5799999999999999999999987
No 26
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.1e-61 Score=478.14 Aligned_cols=310 Identities=29% Similarity=0.438 Sum_probs=273.4
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHH-HHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEc
Q 016162 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVED-IIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (394)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e-l~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~ 93 (394)
|++||++.++++ .+.+.|++. +++...... .+.++ +.+.+. ++|+++++..+++++++++++|+| |+|++.
T Consensus 23 ~~~vl~~~~~~~-~~~~~l~~~-~~~~~~~~~---~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~p~L--k~I~~~ 94 (333)
T 3ba1_A 23 AIGVLMMCPMST-YLEQELDKR-FKLFRYWTQ---PAQRDFLALQAE-SIRAVVGNSNAGADAELIDALPKL--EIVSSF 94 (333)
T ss_dssp CCEEEECSCCCH-HHHHHHHHH-SEEEEGGGC---SSHHHHHHHHTT-TEEEEEECSSSCBCHHHHHHCTTC--CEEEES
T ss_pred CCEEEEeCCCCH-HHHHHHHhc-CCEEEecCC---CChHHHHHHHhC-CCEEEEEcCCCCCCHHHHhhCCCC--cEEEEc
Confidence 578999988876 456777653 455433211 24455 555555 599999887778999999999998 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGl 173 (394)
|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. |. ....|.+++|+||||||+
T Consensus 95 ~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~-~~~~~~~l~g~~vgIIG~ 172 (333)
T 3ba1_A 95 SVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWK-FG-DFKLTTKFSGKRVGIIGL 172 (333)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGG-GC-CCCCCCCCTTCCEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC-cc-ccccccccCCCEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999975 21 223578999999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhc
Q 016162 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (394)
Q Consensus 174 G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~l 253 (394)
|+||+.+|+++ ++|||+|++|||+.... .+ .....++++++++||+|++|+|++++|+++
T Consensus 173 G~iG~~vA~~l-~~~G~~V~~~dr~~~~~--------------~g-----~~~~~~l~ell~~aDvVil~vP~~~~t~~l 232 (333)
T 3ba1_A 173 GRIGLAVAERA-EAFDCPISYFSRSKKPN--------------TN-----YTYYGSVVELASNSDILVVACPLTPETTHI 232 (333)
T ss_dssp SHHHHHHHHHH-HTTTCCEEEECSSCCTT--------------CC-----SEEESCHHHHHHTCSEEEECSCCCGGGTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCchhc--------------cC-----ceecCCHHHHHhcCCEEEEecCCChHHHHH
Confidence 99999999997 79999999999986431 01 123468999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHHHHH
Q 016162 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMA 333 (394)
Q Consensus 254 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~~ 333 (394)
++++.|+.||+|++|||+|||.++|+++|+++|++|+++||++|||+.||++.+|||++|||++|||+|+.|.++++++.
T Consensus 233 i~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~ 312 (333)
T 3ba1_A 233 INREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMA 312 (333)
T ss_dssp BCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHHHH
T ss_pred hhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877899999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCC
Q 016162 334 TLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 334 ~~~~~ni~~~l~g~~~~~~v~ 354 (394)
..+++|+.+|++|+++.|.||
T Consensus 313 ~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 313 DLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp HHHHHHHHHHHHTCCCSSBCC
T ss_pred HHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999988875
No 27
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=1.7e-60 Score=469.58 Aligned_cols=322 Identities=33% Similarity=0.462 Sum_probs=281.2
Q ss_pred CCCceEEEEeCCCCchHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHh-cccCCcE
Q 016162 12 PNGKYRVVSTKPMPGTRWINLLIEQ-DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKA 89 (394)
Q Consensus 12 ~~~~~~vlv~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l-~~l~~k~ 89 (394)
|++++||+++.++++ .+.+.|++. ++++.... .....+++++.+.+. ++|+++++..+++++++++++ |+| |+
T Consensus 5 ~~~~~~il~~~~~~~-~~~~~l~~~~~~~v~~~~-~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~L--k~ 79 (330)
T 2gcg_A 5 PVRLMKVFVTRRIPA-EGRVALARAADCEVEQWD-SDEPIPAKELERGVA-GAHGLLCLLSDHVDKRILDAAGANL--KV 79 (330)
T ss_dssp --CCEEEEESSCCCH-HHHHHHHHCTTEEEEECC-SSSCCCHHHHHHHHT-TCSEEEECTTSCBCHHHHHHHCTTC--CE
T ss_pred CCCCCEEEEECCCCH-HHHHHHHhcCCceEEEec-CCCCCCHHHHHHHhc-CCeEEEECCCCCCCHHHHHhcCCCc--eE
Confidence 456789999988765 467788775 35665432 222357889998887 499999877778999999999 987 99
Q ss_pred EEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEE
Q 016162 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (394)
Q Consensus 90 I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvG 169 (394)
|++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|.+..+.|.+++|+|||
T Consensus 80 I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vg 159 (330)
T 2gcg_A 80 ISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVG 159 (330)
T ss_dssp EEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEE
T ss_pred EEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999987765444567899999999
Q ss_pred EEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChh
Q 016162 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (394)
Q Consensus 170 IIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~ 249 (394)
|||+|.||+.+|+++ +++|++|++||++....... . ..+ ... .++++++++||+|++|+|.+++
T Consensus 160 IIG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~~--~-------~~g-----~~~-~~l~e~l~~aDvVi~~vp~~~~ 223 (330)
T 2gcg_A 160 IIGLGRIGQAIARRL-KPFGVQRFLYTGRQPRPEEA--A-------EFQ-----AEF-VSTPELAAQSDFIVVACSLTPA 223 (330)
T ss_dssp EECCSHHHHHHHHHH-GGGTCCEEEEESSSCCHHHH--H-------TTT-----CEE-CCHHHHHHHCSEEEECCCCCTT
T ss_pred EECcCHHHHHHHHHH-HHCCCEEEEECCCCcchhHH--H-------hcC-----cee-CCHHHHHhhCCEEEEeCCCChH
Confidence 999999999999997 79999999999876432110 1 111 112 3899999999999999999999
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccccCCceEEcCCCCCCcHHH
Q 016162 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWT 328 (394)
Q Consensus 250 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~~~ 328 (394)
|+++++++.++.||+|+++||+|||+++|+++|.++|++|++.||++|||+.||++ ++|||+++||++|||+|+.|.++
T Consensus 224 t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~ 303 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRT 303 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHH
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999975 47999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 329 REGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 329 ~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+.++...+++|+.+|++|+++.|.||
T Consensus 304 ~~~~~~~~~~n~~~~~~g~~~~~~v~ 329 (330)
T 2gcg_A 304 RNTMSLLAANNLLAGLRGEPMPSELK 329 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999988886
No 28
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=1.3e-59 Score=464.05 Aligned_cols=317 Identities=39% Similarity=0.627 Sum_probs=278.5
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEcc
Q 016162 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (394)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g 94 (394)
++||+++.++++ .+.+.|++ .+++++... ....+++++.+.+. ++|+++++..+++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~-~~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~L--k~I~~~~ 75 (334)
T 2dbq_A 2 KPKVFITREIPE-VGIKMLED-EFEVEVWGD-EKEIPREILLKKVK-EVDALVTMLSERIDKEVFENAPKL--RIVANYA 75 (334)
T ss_dssp CCEEEESSCCCH-HHHHHHHT-TSEEEECCC-SSCCCHHHHHHHTT-SCSEEEECTTSCBCHHHHHTCTTC--CEEEESS
T ss_pred CcEEEEecCCCH-HHHHHHHh-cCCEEEecC-CCCCCHHHHHHHhc-CcEEEEEcCCCCCCHHHHhhCCCc--eEEEECC
Confidence 357888887765 45677765 356654332 22347888888887 499999987778999999999988 9999999
Q ss_pred cCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccC----CCCCCcccccccCCCeEEE
Q 016162 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGV 170 (394)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~----~w~~~~~~g~~l~gktvGI 170 (394)
+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|. .|.+..+.|.++.|+||||
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgI 155 (334)
T 2dbq_A 76 VGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 155 (334)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEE
T ss_pred cccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 5654344578999999999
Q ss_pred EecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhh
Q 016162 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (394)
Q Consensus 171 IGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t 250 (394)
||+|.||+.+|+++ +++|++|++|||+...... ..+ |. ...++++++++||+|++|+|.+++|
T Consensus 156 IG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~---~~~-------g~------~~~~l~~~l~~aDvVil~vp~~~~t 218 (334)
T 2dbq_A 156 IGLGRIGQAIAKRA-KGFNMRILYYSRTRKEEVE---REL-------NA------EFKPLEDLLRESDFVVLAVPLTRET 218 (334)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---HHH-------CC------EECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HhCCCEEEEECCCcchhhH---hhc-------Cc------ccCCHHHHHhhCCEEEECCCCChHH
Confidence 99999999999997 7999999999998754211 111 21 1358999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHH
Q 016162 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTRE 330 (394)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~ 330 (394)
+++++++.++.||+|++|||+|||.++|+++|+++|++|++.||++|||+.||..++|||++||||+|||+|+.|.++..
T Consensus 219 ~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~ 298 (334)
T 2dbq_A 219 YHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGARE 298 (334)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHH
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999445699999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 331 GMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 331 ~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
++...+++|+.+|++|+++.|.||
T Consensus 299 ~~~~~~~~n~~~~~~g~~~~~~v~ 322 (334)
T 2dbq_A 299 GMAELVAKNLIAFKRGEIPPTLVN 322 (334)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred HHHHHHHHHHHHHHcCCCCccccC
Confidence 999999999999999999998886
No 29
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.9e-60 Score=466.16 Aligned_cols=312 Identities=30% Similarity=0.460 Sum_probs=276.0
Q ss_pred ceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEcc
Q 016162 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (394)
Q Consensus 15 ~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g 94 (394)
++|||++.++++ ...+.|++. +++++.. ..+.+++.+.+. ++|+++++..+++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~-~~~~~l~~~-~~~~~~~----~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 72 (333)
T 2d0i_A 2 RPKVGVLLKMKR-EALEELKKY-ADVEIIL----YPSGEELKGVIG-RFDGIIVSPTTKITREVLENAERL--KVISCHS 72 (333)
T ss_dssp CSEEEECSCCCH-HHHHHHHTT-SEEEECC----SCCHHHHHHHGG-GCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CcEEEEECCCCH-HHHHHHHhc-CCEEEeC----CCCHHHHHHHhc-CCEEEEECCCCCCCHHHHhhCCCc--eEEEECC
Confidence 468999888876 457777654 5665432 247888888887 499999887778999999999988 9999999
Q ss_pred cCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccc----cccCCCeEEE
Q 016162 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG----NLLKGQTVGV 170 (394)
Q Consensus 95 ~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g----~~l~gktvGI 170 (394)
+|+|+||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|.|..|. ....| .+++|+||||
T Consensus 73 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~~~~~l~g~~vgI 151 (333)
T 2d0i_A 73 AGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHA-KIWTGFKRIESLYGKKVGI 151 (333)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHH-HHHTTSCCCCCSTTCEEEE
T ss_pred cccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCc-ccccCCcccCCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999999999975432 11245 7999999999
Q ss_pred EecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhh
Q 016162 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (394)
Q Consensus 171 IGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t 250 (394)
||+|.||+.+|+++ +++||+|++||++...... ..+ + .. ..++++++++||+|++|+|.+++|
T Consensus 152 IG~G~iG~~vA~~l-~~~G~~V~~~d~~~~~~~~---~~~-------g-----~~-~~~l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 152 LGMGAIGKAIARRL-IPFGVKLYYWSRHRKVNVE---KEL-------K-----AR-YMDIDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp ECCSHHHHHHHHHH-GGGTCEEEEECSSCCHHHH---HHH-------T-----EE-ECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HHCCCEEEEECCCcchhhh---hhc-------C-----ce-ecCHHHHHhhCCEEEEcCCCChHH
Confidence 99999999999997 7999999999998764211 111 1 11 248999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCC-ceEEcCCCCCCcHHHH
Q 016162 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK-NAIVVPHIASASKWTR 329 (394)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~-nvilTPHia~~t~~~~ 329 (394)
+++++++.++.||+| ++||+|||.++|+++|+++|++|++.||++|||++||++++|||++| |||+|||+++.|.+++
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~ 293 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQ 293 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHH
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHH
Confidence 999999999999999 99999999999999999999999999999999999998778999999 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 330 EGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 330 ~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
.++...+++|+.+|++|+++.|.||
T Consensus 294 ~~~~~~~~~n~~~~~~g~~~~~~v~ 318 (333)
T 2d0i_A 294 EDVGFRAVENLLKVLRGEVPEDLVN 318 (333)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred HHHHHHHHHHHHHHHcCCCCcCccC
Confidence 9999999999999999999998886
No 30
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=9e-60 Score=467.46 Aligned_cols=323 Identities=26% Similarity=0.343 Sum_probs=273.4
Q ss_pred ceEEEEeCC-CC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhc----CCCcEEEec------CCccccHHHHHHh
Q 016162 15 KYRVVSTKP-MP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIG----DKCDGVIGQ------LTEDWGETLFAAL 82 (394)
Q Consensus 15 ~~~vlv~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~----~~~d~ii~~------~~~~i~~~~l~~l 82 (394)
++|||++.+ ++ .....+.|++ .+++.... ..+++++.+.+. +++|+++.. ..+++++++++++
T Consensus 3 ~~~vl~~~~~~~~~~~~~~~l~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ 77 (348)
T 2w2k_A 3 RPRVLLLGDPARHLDDLWSDFQQ-KFEVIPAN----LTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHL 77 (348)
T ss_dssp CCEEEECSSCCSSCHHHHHHHHH-HSEEEECC----CCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTS
T ss_pred CcEEEEECCccccChHHHHHHHh-cceEEecC----CCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhc
Confidence 568999887 53 2234566655 35664432 247889998886 258988864 2458999999999
Q ss_pred c-ccCCcEEEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCc---cCC-CCCCc
Q 016162 83 S-RAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL---YDG-WLPNL 157 (394)
Q Consensus 83 ~-~l~~k~I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~---~~~-w~~~~ 157 (394)
| +| |+|++.|+|+||||+++|+++||.|+|+||+++.+||||++++||+++|++..+++.+++|. |.. +....
T Consensus 78 ~~~L--k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~ 155 (348)
T 2w2k_A 78 PSSL--KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIG 155 (348)
T ss_dssp CTTC--CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ccCc--eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCccccccccccc
Confidence 8 47 99999999999999999999999999999999999999999999999999999999999998 731 10011
Q ss_pred ccccccCCCeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc
Q 016162 158 FVGNLLKGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 158 ~~g~~l~gktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (394)
..|.+++|+||||||+|+||+.+|+++ + +|||+|++||++....... .. .+ .....++++++++
T Consensus 156 ~~~~~l~g~~vgIIG~G~IG~~vA~~l-~~~~G~~V~~~d~~~~~~~~~--~~-------~g-----~~~~~~l~ell~~ 220 (348)
T 2w2k_A 156 KSAHNPRGHVLGAVGLGAIQKEIARKA-VHGLGMKLVYYDVAPADAETE--KA-------LG-----AERVDSLEELARR 220 (348)
T ss_dssp TTCCCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEECSSCCCHHHH--HH-------HT-----CEECSSHHHHHHH
T ss_pred ccCcCCCCCEEEEEEECHHHHHHHHHH-HHhcCCEEEEECCCCcchhhH--hh-------cC-----cEEeCCHHHHhcc
Confidence 346899999999999999999999997 8 9999999999986432111 00 11 1122489999999
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceE
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAI 316 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvi 316 (394)
||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|.++|++|++.||++|||+.||.+++||+++||||
T Consensus 221 aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nvi 300 (348)
T 2w2k_A 221 SDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVT 300 (348)
T ss_dssp CSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEE
T ss_pred CCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999996566899999999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCccCcccC
Q 016162 317 VVPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLN 361 (394)
Q Consensus 317 lTPHia~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~~~~~~~~ 361 (394)
+|||+|+.|.+++.++...+++|+.+|++|+++.|.|| . |.+.
T Consensus 301 ltPH~~~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~v~-~-~~~~ 343 (348)
T 2w2k_A 301 LTTHIGGVAIETFHEFERLTMTNIDRFLLQGKPLLTPA-G-KVFA 343 (348)
T ss_dssp ECCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCSSBC-S-CCCC
T ss_pred EcCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCcceec-c-cccC
Confidence 99999999999999999999999999999999999997 3 5443
No 31
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.2e-59 Score=465.68 Aligned_cols=318 Identities=27% Similarity=0.380 Sum_probs=265.3
Q ss_pred CCceEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEE
Q 016162 13 NGKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (394)
Q Consensus 13 ~~~~~vlv~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~ 91 (394)
..|++|++.+... ..+ .+.++. ..++.... ..+.+|+.+.+.+++|+++++..+.+++++++++|+| |+|+
T Consensus 19 ~~kp~i~~l~~~~~~~~-~~~l~~-~~~~~~~~----~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L--k~I~ 90 (347)
T 1mx3_A 19 SHMPLVALLDGRDCTVE-MPILKD-VATVAFCD----AQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKAL--RIIV 90 (347)
T ss_dssp --CCEEEESSCSCCTTT-HHHHTT-TCEEEECC----CSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSC--CEEE
T ss_pred CCCCEEEEEcCCcchhh-HHHhhc-cceEEecC----CCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCC--CEEE
Confidence 5578888875321 222 455544 44555332 2356676665422478888877778999999999988 9999
Q ss_pred EcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCC---Ccc-cccccCCCe
Q 016162 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLP---NLF-VGNLLKGQT 167 (394)
Q Consensus 92 ~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~---~~~-~g~~l~gkt 167 (394)
+.|+|+|+||+++|+++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|..... ... .+.+++|+|
T Consensus 91 ~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~t 170 (347)
T 1mx3_A 91 RIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGET 170 (347)
T ss_dssp ESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCE
T ss_pred EcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCE
Confidence 9999999999999999999999999999999999999999999999999999999999731100 001 136899999
Q ss_pred EEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCC
Q 016162 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD 247 (394)
Q Consensus 168 vGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt 247 (394)
|||||+|+||+.+|+++ ++|||+|++|||+.....+. .+ | .....++++++++||+|++|+|++
T Consensus 171 vGIIG~G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---~~-------g-----~~~~~~l~ell~~aDvV~l~~P~t 234 (347)
T 1mx3_A 171 LGIIGLGRVGQAVALRA-KAFGFNVLFYDPYLSDGVER---AL-------G-----LQRVSTLQDLLFHSDCVTLHCGLN 234 (347)
T ss_dssp EEEECCSHHHHHHHHHH-HTTTCEEEEECTTSCTTHHH---HH-------T-----CEECSSHHHHHHHCSEEEECCCCC
T ss_pred EEEEeECHHHHHHHHHH-HHCCCEEEEECCCcchhhHh---hc-------C-----CeecCCHHHHHhcCCEEEEcCCCC
Confidence 99999999999999997 79999999999986542111 11 1 122358999999999999999999
Q ss_pred hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC--CCccccCCceEEcCCCCCCc
Q 016162 248 KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM--KPGLSEMKNAIVVPHIASAS 325 (394)
Q Consensus 248 ~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~--~~~L~~~~nvilTPHia~~t 325 (394)
++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|++.||++|||+.||++ ++||+.+|||++|||+++.|
T Consensus 235 ~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t 314 (347)
T 1mx3_A 235 EHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYS 314 (347)
T ss_dssp TTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCC
T ss_pred HHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 36899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 326 KWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 326 ~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
.+++.++...+++|+.+|++|+++.+.+|
T Consensus 315 ~~~~~~~~~~~~~ni~~~~~g~~~~~l~~ 343 (347)
T 1mx3_A 315 EQASIEMREEAAREIRRAITGRIPDSLKN 343 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcccCC
Confidence 99999999999999999999987664443
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.2e-59 Score=458.27 Aligned_cols=292 Identities=22% Similarity=0.302 Sum_probs=256.8
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEccc
Q 016162 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (394)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g~ 95 (394)
||||++.++++ .+.+.|++.++++. . +.+. ++|+++++. .+.++++++|+| |+|++.|+
T Consensus 1 m~il~~~~~~~-~~~~~l~~~~~~v~----~----------~~~~-~~d~~i~~~---~~~~~l~~~~~L--k~I~~~~~ 59 (303)
T 1qp8_A 1 MELYVNFELPP-EAEEELRKYFKIVR----G----------GDLG-NVEAALVSR---ITAEELAKMPRL--KFIQVVTA 59 (303)
T ss_dssp CEEECCSCCCH-HHHHHHHTTCEEEC----S----------SCCT-TBCCCCBSC---CCHHHHHHCTTC--CCEEBSSS
T ss_pred CEEEEccCCCH-HHHHHHHhcCCccc----h----------hhhC-CCEEEEECC---CCHHHHhhCCCC--cEEEECCc
Confidence 47888888776 46788877654431 0 1233 589888764 346899999988 99999999
Q ss_pred CccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh
Q 016162 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (394)
Q Consensus 96 G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~ 175 (394)
|+|+||++++ ++||.|+|+|++++.+||||++++||+++|++..+++.+++|.|..+ ..+.+++|+|+||||+|+
T Consensus 60 G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~----~~~~~l~g~~vgIIG~G~ 134 (303)
T 1qp8_A 60 GLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRD----VEIPLIQGEKVAVLGLGE 134 (303)
T ss_dssp CCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC----SCCCCCTTCEEEEESCST
T ss_pred CcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCC----CCCCCCCCCEEEEEccCH
Confidence 9999999985 79999999999999999999999999999999999999999997432 123589999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhccc
Q 016162 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (394)
Q Consensus 176 IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~ 255 (394)
||+.+|+++ ++|||+|++|||+... . + .....++++++++||+|++|+|++++|+++|+
T Consensus 135 IG~~~A~~l-~~~G~~V~~~dr~~~~---~------------~-----~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~ 193 (303)
T 1qp8_A 135 IGTRVGKIL-AALGAQVRGFSRTPKE---G------------P-----WRFTNSLEEALREARAAVCALPLNKHTRGLVK 193 (303)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCC---S------------S-----SCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCccc---c------------C-----cccCCCHHHHHhhCCEEEEeCcCchHHHHHhC
Confidence 999999997 7999999999997641 0 1 11246899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeecc-CCCCCC-CCccccCCceEEcCCCCCC--cHHHHHH
Q 016162 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF-EDEPYM-KPGLSEMKNAIVVPHIASA--SKWTREG 331 (394)
Q Consensus 256 ~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~-~~EP~~-~~~L~~~~nvilTPHia~~--t~~~~~~ 331 (394)
++.|+.||+|+++||+|||+++|+++|+++|++|++.||++||| ++||++ ++|||++|||++|||++|. |.+++++
T Consensus 194 ~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~ 273 (303)
T 1qp8_A 194 YQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQ 273 (303)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999 889986 4799999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Q 016162 332 MATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 332 ~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+...+++|+.+|++|+++.|.||
T Consensus 274 ~~~~~~~nl~~~~~g~~~~~~v~ 296 (303)
T 1qp8_A 274 MVMEAVRNLITYATGGRPRNIAK 296 (303)
T ss_dssp HHHHHHHHHHHHHTTSCCSCBCC
T ss_pred HHHHHHHHHHHHHcCCCCCceeC
Confidence 99999999999999999998886
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=5.1e-59 Score=464.15 Aligned_cols=281 Identities=26% Similarity=0.358 Sum_probs=244.8
Q ss_pred CceEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEc
Q 016162 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (394)
Q Consensus 14 ~~~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~ 93 (394)
++||||+++.++. ..+.+.+.+ ++.+... ...+.++ +. ++|++++++.+++++++++ .++| |+|++.
T Consensus 2 ~mmkIl~~~~~p~--~~~~~~~~~-~v~~~~~--~~~~~~~----l~-~ad~li~~~~~~v~~~ll~-~~~L--k~I~~~ 68 (381)
T 3oet_A 2 NAMKILVDENMPY--ARELFSRLG-EVKAVPG--RPIPVEE----LN-HADALMVRSVTKVNESLLS-GTPI--NFVGTA 68 (381)
T ss_dssp CCCEEEEETTSTT--HHHHHTTSS-EEEEECC-----CHHH----HT-TCSEEEECTTSCBSHHHHT-TSCC--CEEEES
T ss_pred CceEEEECCCCcH--HHHHHhhCC-cEEEeCC--CCCCHHH----HC-CCEEEEECCCCCCCHHHHc-CCCC--EEEEEc
Confidence 4589999998875 346666655 6655432 2235544 34 5999999988889999998 5556 999999
Q ss_pred ccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016162 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (394)
Q Consensus 94 g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGl 173 (394)
|+|+||||+++|+++||.|+|+||+|+.+||||+++++|+++|+. |.+++|+||||||+
T Consensus 69 ~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~---------------------g~~l~gktvGIIGl 127 (381)
T 3oet_A 69 TAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD---------------------GFSLRDRTIGIVGV 127 (381)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT---------------------TCCGGGCEEEEECC
T ss_pred cccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc---------------------CCccCCCEEEEEeE
Confidence 999999999999999999999999999999999999999999852 25799999999999
Q ss_pred ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChh----
Q 016162 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT---- 249 (394)
Q Consensus 174 G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~---- 249 (394)
|+||+.+|+++ ++|||+|++|||+.... + . .....++++++++||+|++|+|+|++
T Consensus 128 G~IG~~vA~~l-~a~G~~V~~~d~~~~~~---------------~-~---~~~~~sl~ell~~aDiV~l~~Plt~~g~~~ 187 (381)
T 3oet_A 128 GNVGSRLQTRL-EALGIRTLLCDPPRAAR---------------G-D---EGDFRTLDELVQEADVLTFHTPLYKDGPYK 187 (381)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECHHHHHT---------------T-C---CSCBCCHHHHHHHCSEEEECCCCCCSSTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCChHHh---------------c-c---CcccCCHHHHHhhCCEEEEcCcCCcccccc
Confidence 99999999997 89999999999854321 0 0 11346999999999999999999999
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHH
Q 016162 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTR 329 (394)
Q Consensus 250 t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~ 329 (394)
|+++|+++.|+.||+|++|||+|||++||++||++||++|++.||+||||++||+++++||.++ +++|||+||+|.|++
T Consensus 188 T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~e~~ 266 (381)
T 3oet_A 188 TLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTLEGK 266 (381)
T ss_dssp CTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCHHHH
T ss_pred chhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887899865 899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCC
Q 016162 330 EGMATLAALNVLGKIKGYPI 349 (394)
Q Consensus 330 ~~~~~~~~~ni~~~l~g~~~ 349 (394)
.++..++++|+.+|+.+.+-
T Consensus 267 ~~~~~~~~~~l~~~l~~~~~ 286 (381)
T 3oet_A 267 ARGTTQVFEAYSAFIGREQR 286 (381)
T ss_dssp HHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999988653
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.3e-57 Score=436.31 Aligned_cols=250 Identities=26% Similarity=0.358 Sum_probs=223.7
Q ss_pred CCcEEEecCCccccHHHHHHhcccCCcEEEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHH
Q 016162 62 KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA 141 (394)
Q Consensus 62 ~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~ 141 (394)
++|++++. ...+ ++|+| |+|++.|+|+|+||+++|++++|.++| ++.++.+||||++++||++.|++..+
T Consensus 34 ~ad~li~~-~~~~------~~~~L--k~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~ 103 (290)
T 3gvx_A 34 DAEAQVIK-DRYV------LGKRT--KMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILEN 103 (290)
T ss_dssp CCSEEEES-SCCC------CCSSC--CEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred hhhhhhhh-hhhh------hhhhh--HHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhh
Confidence 59999984 3332 68888 999999999999999999987776665 58899999999999999999999999
Q ss_pred HHHHHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCC
Q 016162 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP 221 (394)
Q Consensus 142 ~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (394)
++.+++|.|.. . ..++++|+||||||+|+||+++|+++ ++|||+|++|||+..... .
T Consensus 104 ~~~~~~g~w~~---~--~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~---------------~-- 160 (290)
T 3gvx_A 104 NELMKAGIFRQ---S--PTTLLYGKALGILGYGGIGRRVAHLA-KAFGMRVIAYTRSSVDQN---------------V-- 160 (290)
T ss_dssp HHHHHTTCCCC---C--CCCCCTTCEEEEECCSHHHHHHHHHH-HHHTCEEEEECSSCCCTT---------------C--
T ss_pred hhHhhhccccc---C--CceeeecchheeeccCchhHHHHHHH-HhhCcEEEEEeccccccc---------------c--
Confidence 99999999742 2 12689999999999999999999997 799999999999864310 0
Q ss_pred ccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCC
Q 016162 222 VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (394)
Q Consensus 222 ~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~ 301 (394)
.....++++++++||+|++|+|+|++|+++++++.|+.||+|++|||+|||+++|+++|+++|++|++.||++|||++
T Consensus 161 --~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~ 238 (290)
T 3gvx_A 161 --DVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWN 238 (290)
T ss_dssp --SEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTT
T ss_pred --ccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccC
Confidence 123458999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCceEEcCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCC
Q 016162 302 EPYMKPGLSEMKNAIVVPHIA-SASKWTREGMATLAALNVLGKIKGYP 348 (394)
Q Consensus 302 EP~~~~~L~~~~nvilTPHia-~~t~~~~~~~~~~~~~ni~~~l~g~~ 348 (394)
||+ +|||++|||++|||+| ++|.++++++...+++|+.+|++|+.
T Consensus 239 EP~--~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 239 EPE--ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp TTS--CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC---
T ss_pred Ccc--cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCC
Confidence 998 8999999999999999 89999999999999999999999864
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.9e-56 Score=442.92 Aligned_cols=281 Identities=25% Similarity=0.352 Sum_probs=244.5
Q ss_pred eEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhcccCCcEEEEccc
Q 016162 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (394)
Q Consensus 16 ~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g~ 95 (394)
|||++++.++.. .+.+.+.+ ++.+.... ..+.+++ . ++|++++++.+.+++++++ +|+| |+|++.|+
T Consensus 1 mkil~~~~~~~~--~~~~~~~~-~v~~~~~~--~~~~~~l----~-~ad~li~~~~~~~~~~~l~-~~~L--k~I~~~~~ 67 (380)
T 2o4c_A 1 MRILADENIPVV--DAFFADQG-SIRRLPGR--AIDRAAL----A-EVDVLLVRSVTEVSRAALA-GSPV--RFVGTCTI 67 (380)
T ss_dssp CEEEEETTCTTH--HHHHGGGS-EEEEECGG--GCSTTTT----T-TCSEEEECTTSCBCHHHHT-TSCC--CEEEECSS
T ss_pred CEEEEecCchHH--HHHHHhCC-cEEEecCC--cCChHHH----C-CcEEEEEcCCCCCCHHHhc-CCCc--eEEEEcCc
Confidence 478888877652 45665554 55544321 1233333 3 5999999888889999999 8987 99999999
Q ss_pred CccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh
Q 016162 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (394)
Q Consensus 96 G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~ 175 (394)
|+||||+++|+++||.|+|+||+|+.+||||++++||++.|++ |.+++|+||||||+|+
T Consensus 68 G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~---------------------~~~l~g~tvGIIGlG~ 126 (380)
T 2o4c_A 68 GTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR---------------------GADLAERTYGVVGAGQ 126 (380)
T ss_dssp CSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH---------------------TCCGGGCEEEEECCSH
T ss_pred ccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh---------------------hcccCCCEEEEEeCCH
Confidence 9999999999999999999999999999999999999999852 2479999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChh----hh
Q 016162 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT----TY 251 (394)
Q Consensus 176 IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~----t~ 251 (394)
||+++|+++ ++|||+|++|||+.... . .+ ....++++++++||+|++|+|++++ |+
T Consensus 127 IG~~vA~~l-~~~G~~V~~~d~~~~~~--~-----------~g------~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 127 VGGRLVEVL-RGLGWKVLVCDPPRQAR--E-----------PD------GEFVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp HHHHHHHHH-HHTTCEEEEECHHHHHH--S-----------TT------SCCCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred HHHHHHHHH-HHCCCEEEEEcCChhhh--c-----------cC------cccCCHHHHHHhCCEEEEeccCccccccchh
Confidence 999999997 79999999999865421 0 01 1246899999999999999999999 99
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHHHH
Q 016162 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (394)
Q Consensus 252 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~ 331 (394)
++++++.|+.||+|+++||+|||+++|+++|+++|++|++.||+||||++||+++++|+. +||++|||+||+|.+++.+
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~-~nvi~TPHiag~t~e~~~~ 265 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAA-RCLIATPHIAGYSLEGKLR 265 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHT-TCSEECSSCTTCCHHHHHH
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhcc-CCEEEccccCcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988778887 5999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCC
Q 016162 332 MATLAALNVLGKIKGYPIWG 351 (394)
Q Consensus 332 ~~~~~~~ni~~~l~g~~~~~ 351 (394)
+..++++|+.+|++|++..+
T Consensus 266 ~~~~~~~nl~~~l~g~~~~~ 285 (380)
T 2o4c_A 266 GTAQIYQAYCAWRGIAERVS 285 (380)
T ss_dssp HHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCccc
Confidence 99999999999999987544
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=8e-38 Score=319.55 Aligned_cols=255 Identities=13% Similarity=0.084 Sum_probs=211.1
Q ss_pred CcEEE-EcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCC
Q 016162 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (394)
Q Consensus 87 ~k~I~-~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~g 165 (394)
++.|+ .+++|+|++ ++|.++||.++|+|++|. +||| +++|++....+.+++| |. + ..+.++.|
T Consensus 194 l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~---r--~~~~~l~G 257 (479)
T 1v8b_A 194 IIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LM---R--ATDFLISG 257 (479)
T ss_dssp CCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HH---H--HHCCCCTT
T ss_pred eEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hh---h--ccccccCC
Confidence 38888 889999998 789999999999999999 9999 4568888888888887 53 2 35678999
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
+||||||+|.||+.+|+++ ++|||+|++||+++....... ..+ + ...++++++++||+|++|+
T Consensus 258 ktVgIIG~G~IG~~vA~~l-~~~G~~Viv~d~~~~~~~~a~---------~~g-----~-~~~~l~ell~~aDiVi~~~- 320 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSM-KGLGARVYITEIDPICAIQAV---------MEG-----F-NVVTLDEIVDKGDFFITCT- 320 (479)
T ss_dssp SEEEEECCSHHHHHHHHHH-HHHTCEEEEECSCHHHHHHHH---------TTT-----C-EECCHHHHTTTCSEEEECC-
T ss_pred CEEEEEeeCHHHHHHHHHH-HhCcCEEEEEeCChhhHHHHH---------HcC-----C-EecCHHHHHhcCCEEEECC-
Confidence 9999999999999999997 899999999999986532211 111 1 2358999999999999995
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH--HHHcCCcceEEeeccCCCCCCCCccccC--CceEEcCC
Q 016162 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE--HLKQNPMFRVGLDVFEDEPYMKPGLSEM--KNAIVVPH 320 (394)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~--aL~~g~l~gaalDV~~~EP~~~~~L~~~--~nvilTPH 320 (394)
+|.++|+++.|+.||+|++|||+|||++ ||+++|.+ ||++|+|+ +++|||+.++ ++|||.+ |||++| |
T Consensus 321 ---~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~~~l~~l~~~nvv~t-H 393 (479)
T 1v8b_A 321 ---GNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--GNKIIVLARGRLLNL-G 393 (479)
T ss_dssp ---SSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--SCEEEEEGGGSBHHH-H
T ss_pred ---ChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--CCeeeEecCCCEEEE-e
Confidence 7899999999999999999999999999 99999999 99999998 9999995432 4688888 999999 9
Q ss_pred CC-CCcHH-HHHHHHHHHHHHHHHHHcCC--CCCCCCCccCcccCCCCCCCcCCCchhhHHHHHHHhhhccc
Q 016162 321 IA-SASKW-TREGMATLAALNVLGKIKGY--PIWGNPNQVEPFLNENAQPPAASPSIVNSKVCRFQGFKLSA 388 (394)
Q Consensus 321 ia-~~t~~-~~~~~~~~~~~ni~~~l~g~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (394)
+| +++.+ +..++..++++|+..|++|+ ++.|.|+++ |.. ..+.+.+ +.| +++|..+.||++
T Consensus 394 ~atghp~e~~~~s~a~~~~~ni~~~~~g~~~~l~n~V~~l-p~~----~de~va~-l~L-~~lG~~l~~lt~ 458 (479)
T 1v8b_A 394 CATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLL-PKH----LDEKVAL-YHL-KKLNASLTELDD 458 (479)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHHHHHTTTSSSCCSSEECC-CHH----HHHHHHH-HHH-GGGTCCCCCCCH
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHcCCCCcCCcceEeC-Chh----hHHHHHH-HHH-HHcCChHhhcCh
Confidence 99 66755 77889999999999999999 999988865 543 2334444 455 667766666654
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=1.4e-38 Score=326.32 Aligned_cols=255 Identities=15% Similarity=0.151 Sum_probs=204.6
Q ss_pred cccCCcEEE-EcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCccccc
Q 016162 83 SRAGGKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGN 161 (394)
Q Consensus 83 ~~l~~k~I~-~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~ 161 (394)
+++ +.|+ .+++|+|++ ++|.++||.++|+|++|+ +|||+ ++|++....+.+++| |.+ ..|.
T Consensus 212 ~~l--~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g----w~~--~~g~ 273 (494)
T 3d64_A 212 AHI--KGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG----IKR--ATDV 273 (494)
T ss_dssp TTC--CCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH----HHH--HHCC
T ss_pred hCc--EEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh----hhh--cccc
Confidence 544 8887 889999998 789999999999999999 99994 347766655555555 422 3567
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
+++|+||||||+|.||+.+|+++ ++|||+|++||+++....+.. ..| + ...++++++++||+|+
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l-~~~G~~V~v~d~~~~~~~~a~---------~~G-----~-~~~~l~ell~~aDiVi 337 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSL-RGLGATVWVTEIDPICALQAA---------MEG-----Y-RVVTMEYAADKADIFV 337 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTTCEEEEECSCHHHHHHHH---------TTT-----C-EECCHHHHTTTCSEEE
T ss_pred ccCCCEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCChHhHHHHH---------HcC-----C-EeCCHHHHHhcCCEEE
Confidence 89999999999999999999997 899999999999986532211 011 1 2358999999999999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccccC--CceEE
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEM--KNAIV 317 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~~~--~nvil 317 (394)
+|+ +|+++|+++.|+.||+|++|||+|||++ ||+++| +||++|+|+ +++|+| |++ ++|||.+ |||++
T Consensus 338 ~~~----~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv~---plp~~~pL~~l~~~nvv~ 408 (494)
T 3d64_A 338 TAT----GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDHI---IFPDGKRVILLAEGRLVN 408 (494)
T ss_dssp ECS----SSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHH
T ss_pred ECC----CcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEEE---ECCCCCchhhcCCCCEEE
Confidence 997 6899999999999999999999999999 699999 999999987 555555 654 3689888 99999
Q ss_pred cCCCC-CCcH-HHHHHHHHHHHHHHHHHHcCCCCCCCCCccCcccCCCCCCCcCCCchhhHHHHHHHhhhccc
Q 016162 318 VPHIA-SASK-WTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLNENAQPPAASPSIVNSKVCRFQGFKLSA 388 (394)
Q Consensus 318 TPHia-~~t~-~~~~~~~~~~~~ni~~~l~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (394)
| |+| +++. .+..++..++++|+..|++|+++.|.|+++ |. +..+.+.+ +.| +++|..+.||++
T Consensus 409 t-H~atg~~~~~~~~~~a~~~~~ni~~~~~g~~~~n~V~~l-p~----~~d~~va~-l~L-~~~g~~~~~l~~ 473 (494)
T 3d64_A 409 L-GCATGHPSFVMSNSFTNQTLAQIELFTRGGEYANKVYVL-PK----HLDEKVAR-LHL-ARIGAQLSELSD 473 (494)
T ss_dssp H-HTSCCSCHHHHHHHHHHHHHHHHHHHHHGGGSCSSEEEC-CH----HHHHHHHH-HHH-TTTTCCCCCCCH
T ss_pred E-eCcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCceeeC-Ch----hHHHHHHH-HHH-HHcCChHHhhCh
Confidence 9 999 6664 478889999999999999999999999755 43 12233333 555 667777776654
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.96 E-value=5.6e-29 Score=240.69 Aligned_cols=214 Identities=15% Similarity=0.088 Sum_probs=164.7
Q ss_pred ceEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCC------CCHHHHHHHhcCCCcEEEec----------------CC
Q 016162 15 KYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTI------LSVEDIIALIGDKCDGVIGQ----------------LT 71 (394)
Q Consensus 15 ~~~vlv~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~------~~~~el~~~~~~~~d~ii~~----------------~~ 71 (394)
+|||++..... ...+.+.|.+.|+++.+....... ...+++.+.+. ++|+++++ ..
T Consensus 5 ~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~~~~~~~~ 83 (293)
T 3d4o_A 5 GKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWN-TVDAILLPISGTNEAGKVDTIFSNES 83 (293)
T ss_dssp TCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGG-GCSEEECCTTCCCTTCBCCBSSCSCC
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHh-cCCEEEeccccccCCceeecccccCC
Confidence 45666654322 234678888889998765432110 12245555555 49999985 34
Q ss_pred ccccHHHHHHhcccCCcEEEEcccCccccch-hHHhhCCceEecCC------CCCchhhHHHHHHHHHHHHhchHHHHHH
Q 016162 72 EDWGETLFAALSRAGGKAFSNMAVGYNNVDV-NAANKYGIAVGNTP------GVLTETTAELAASLSLAAARRIVEADEF 144 (394)
Q Consensus 72 ~~i~~~~l~~l~~l~~k~I~~~g~G~d~id~-~~a~~~gI~v~n~p------~~~~~~vAE~~l~~~L~~~R~~~~~~~~ 144 (394)
+.+++++++++|++ |+|+ +|+|++|+ ++|+++||.|+|+| ++++.+|||++++++|..
T Consensus 84 ~~~~~~~l~~~~~l--~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~---------- 148 (293)
T 3d4o_A 84 IVLTEEMIEKTPNH--CVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH---------- 148 (293)
T ss_dssp CBCCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred ccchHHHHHhCCCC--CEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh----------
Confidence 46899999999988 9987 79999998 89999999999998 889999999999998852
Q ss_pred HHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccc
Q 016162 145 MRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW 224 (394)
Q Consensus 145 ~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (394)
.+.+++|+|+||||+|.||+.+|+++ +++||+|++|||+...... ... .|. ..
T Consensus 149 --------------~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~dr~~~~~~~--~~~-------~g~---~~ 201 (293)
T 3d4o_A 149 --------------TDFTIHGANVAVLGLGRVGMSVARKF-AALGAKVKVGARESDLLAR--IAE-------MGM---EP 201 (293)
T ss_dssp --------------CSSCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH--HHH-------TTS---EE
T ss_pred --------------cCCCCCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEECCHHHHHH--HHH-------CCC---ee
Confidence 13579999999999999999999997 7999999999998754211 111 121 11
Q ss_pred cccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016162 225 KRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (394)
Q Consensus 225 ~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~ 276 (394)
....++++++++||+|++|+|. ++++++.|+.||+|+++||++||..
T Consensus 202 ~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 202 FHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred cChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 1235789999999999999994 7899999999999999999999754
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=4.8e-26 Score=220.73 Aligned_cols=221 Identities=15% Similarity=0.095 Sum_probs=158.9
Q ss_pred CceEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCC------CHHHHHHHhcCCCcEEEec---C-----------Cc
Q 016162 14 GKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTIL------SVEDIIALIGDKCDGVIGQ---L-----------TE 72 (394)
Q Consensus 14 ~~~~vlv~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~------~~~el~~~~~~~~d~ii~~---~-----------~~ 72 (394)
+.|||++...-. ...+.+.|.+.++++.+...++... ..+++.+.+. ++|+++.. . .+
T Consensus 6 ~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 6 TGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQ-QIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGG-GCSEEECCSSCEETTTEECBSSCSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHh-cCCEEEeccccccCCcccccccccC
Confidence 346777765422 2346788888899987654322110 1123444455 59999872 1 34
Q ss_pred c--ccHHHHHHhcccCCcEEEEcccCccccc-hhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCc
Q 016162 73 D--WGETLFAALSRAGGKAFSNMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL 149 (394)
Q Consensus 73 ~--i~~~~l~~l~~l~~k~I~~~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~ 149 (394)
+ +++++++++|++ |+|+ +|+|++| +++|+++||.|+|+|+++ ++ ++.|++..+ +|.
T Consensus 85 ~~~~~~~~l~~~~~l--~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~ 143 (300)
T 2rir_A 85 EVVLKQDHLDRTPAH--CVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGT 143 (300)
T ss_dssp CEECCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHH
T ss_pred CccchHHHHhhcCCC--CEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHH
Confidence 5 789999999987 8887 8999999 999999999999999974 22 334555443 344
Q ss_pred cCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC
Q 016162 150 YDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (394)
Q Consensus 150 ~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
|.. .....+.+++|+|+||||+|.||+.+|+++ +++|++|++|||+..... .. . ..+. ......+
T Consensus 144 ~~~--~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~d~~~~~~~-~~-~-------~~g~---~~~~~~~ 208 (300)
T 2rir_A 144 IML--AIQHTDYTIHGSQVAVLGLGRTGMTIARTF-AALGANVKVGARSSAHLA-RI-T-------EMGL---VPFHTDE 208 (300)
T ss_dssp HHH--HHHTCSSCSTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHH-HH-H-------HTTC---EEEEGGG
T ss_pred HHH--HHHhcCCCCCCCEEEEEcccHHHHHHHHHH-HHCCCEEEEEECCHHHHH-HH-H-------HCCC---eEEchhh
Confidence 321 001245789999999999999999999997 799999999999875421 11 1 1121 1112357
Q ss_pred HHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016162 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (394)
Q Consensus 230 l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~ 276 (394)
+++++++||+|++|+|+ ++++++.|+.||+|+++||++||+.
T Consensus 209 l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 209 LKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp HHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred HHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 99999999999999995 7899999999999999999999754
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.92 E-value=2.3e-26 Score=236.35 Aligned_cols=253 Identities=14% Similarity=0.055 Sum_probs=189.7
Q ss_pred EEEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeE
Q 016162 89 AFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTV 168 (394)
Q Consensus 89 ~I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktv 168 (394)
++-.+|+|+|++ .++.++||.++|++++|. +|||+ .+|+++...+.+..+ |.+ ..+..+.|++|
T Consensus 214 vveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g----~~r--~~~~~l~GktV 277 (494)
T 3ce6_A 214 VTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG----INR--GTDALIGGKKV 277 (494)
T ss_dssp EEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH----HHH--HHCCCCTTCEE
T ss_pred EEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH----HHh--ccCCCCCcCEE
Confidence 445889999998 678899999999999999 99994 345555444444333 422 23457899999
Q ss_pred EEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCCh
Q 016162 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (394)
Q Consensus 169 GIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~ 248 (394)
+|+|+|.||+.+|+++ +++|++|+++|+++...... ...|. . ..+++++++.+|+|+.|++
T Consensus 278 ~IiG~G~IG~~~A~~l-ka~Ga~Viv~d~~~~~~~~A---------~~~Ga-----~-~~~l~e~l~~aDvVi~atg--- 338 (494)
T 3ce6_A 278 LICGYGDVGKGCAEAM-KGQGARVSVTEIDPINALQA---------MMEGF-----D-VVTVEEAIGDADIVVTATG--- 338 (494)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHH---------HHTTC-----E-ECCHHHHGGGCSEEEECSS---
T ss_pred EEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH---------HHcCC-----E-EecHHHHHhCCCEEEECCC---
Confidence 9999999999999996 89999999999987653221 11121 1 2578899999999999975
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH-HHHcCCcceEEeeccCCCCCCCC-ccccCCceE----EcCCC
Q 016162 249 TTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE-HLKQNPMFRVGLDVFEDEPYMKP-GLSEMKNAI----VVPHI 321 (394)
Q Consensus 249 ~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~-aL~~g~l~gaalDV~~~EP~~~~-~L~~~~nvi----lTPHi 321 (394)
+.++++.+.|+.||+|++++|++|++. +|+++|.. +|+++++. +++|+|+.++...+ .|+..++++ +|||+
T Consensus 339 -t~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~ 416 (494)
T 3ce6_A 339 -NKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHP 416 (494)
T ss_dssp -SSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSC
T ss_pred -CHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCc
Confidence 456888899999999999999999999 99999998 88888877 66899876442221 367778888 99999
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCccCcccCCCCCCCcCCCchhhHHHHHHHhhhccc
Q 016162 322 ASASKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLNENAQPPAASPSIVNSKVCRFQGFKLSA 388 (394)
Q Consensus 322 a~~t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (394)
++.+.++ +...+.+++..+.+|+++.+.|. + .+ ++.++.-..+.| .++|..+.||+.
T Consensus 417 a~~~~~s---~~~qa~~ai~~~~~g~~~~~~V~-~----~P-~~~De~vA~lhL-~~lg~~l~~lt~ 473 (494)
T 3ce6_A 417 SFVMSNS---FANQTIAQIELWTKNDEYDNEVY-R----LP-KHLDEKVARIHV-EALGGHLTKLTK 473 (494)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHTGGGCCSSEE-C----CC-HHHHHHHHHHHH-HHHTCCCCCCCH
T ss_pred cccchHH---HHHHHHHHHHHHHcCCCCCCEEE-E----CH-HHHHHHHHHhhH-HHHHHHHHHhCh
Confidence 9877754 46788999999999988877763 2 12 233343444555 555666655543
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.90 E-value=1.5e-22 Score=202.41 Aligned_cols=301 Identities=15% Similarity=0.146 Sum_probs=199.9
Q ss_pred eeEEEeCCCCc--eEEEEeCCCCchHHHHHHHhCCCeEEEecCC--CCCCCHHHHH-----------HHhcCCCcEEEec
Q 016162 5 VSIEVWNPNGK--YRVVSTKPMPGTRWINLLIEQDCRVEICTQK--KTILSVEDII-----------ALIGDKCDGVIGQ 69 (394)
Q Consensus 5 ~~~~~~~~~~~--~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~el~-----------~~~~~~~d~ii~~ 69 (394)
|+|-|+++.+. .|| .+.| +..+.|.+.|+++.+.... ....+.++.. +.+. ++|+|+ .
T Consensus 1 m~igv~~e~~~~E~Rv----~ltP-~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~-~adii~-~ 73 (377)
T 2vhw_A 1 MRVGIPTETKNNEFRV----AITP-AGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWA-DADLLL-K 73 (377)
T ss_dssp CEEEECCCCSTTCCCC----SCCH-HHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHH-HCSEEE-C
T ss_pred CEEEEEccCCCCCccc----CcCH-HHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhc-cCCEEE-E
Confidence 45556655543 233 3444 3578888889888664322 1234555554 2233 378664 5
Q ss_pred CCccccHHHHHHhcccCCcEEEEcccCccccchhHHhhCCceEe----------cCCCCCchhhHHHHHHHHHHHH-hch
Q 016162 70 LTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVG----------NTPGVLTETTAELAASLSLAAA-RRI 138 (394)
Q Consensus 70 ~~~~i~~~~l~~l~~l~~k~I~~~g~G~d~id~~~a~~~gI~v~----------n~p~~~~~~vAE~~l~~~L~~~-R~~ 138 (394)
...+.++++....+.. .+++....++|...++++.++||.+. |.|.++ ++||++..+++.+. |++
T Consensus 74 vk~p~~~e~~~l~~~~--~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~~a~~~a~r~l 149 (377)
T 2vhw_A 74 VKEPIAAEYGRLRHGQ--ILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGRLAAQVGAYHL 149 (377)
T ss_dssp SSCCCGGGGGGCCTTC--EEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHHHHHHHHHHHT
T ss_pred eCCCChHHHhhcCCCC--EEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHHHHHHHHHHHH
Confidence 5556666665545543 67777778889999999999999997 566654 55699985554444 666
Q ss_pred HHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcC
Q 016162 139 VEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG 218 (394)
Q Consensus 139 ~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~ 218 (394)
. ..+.|+|. |... ..++.|++|+|+|+|.||+.+|+.+ +++|++|+++|++.... +...+.+ +
T Consensus 150 ~----~~~~g~~~-~~~~---~~~l~g~~V~ViG~G~iG~~~a~~a-~~~Ga~V~~~d~~~~~l-~~~~~~~-------g 212 (377)
T 2vhw_A 150 M----RTQGGRGV-LMGG---VPGVEPADVVVIGAGTAGYNAARIA-NGMGATVTVLDINIDKL-RQLDAEF-------C 212 (377)
T ss_dssp S----GGGTSCCC-CTTC---BTTBCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHT-------T
T ss_pred H----HhcCCCcc-cccC---CCCCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHHhc-------C
Confidence 3 23445543 2221 1368999999999999999999996 89999999999987542 2111111 1
Q ss_pred CCC-ccccccCCHHHHhcccCEEEEcC--CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEE
Q 016162 219 EQP-VTWKRASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVG 295 (394)
Q Consensus 219 ~~~-~~~~~~~~l~ell~~aDiV~l~l--Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaa 295 (394)
... .......+++++++++|+|+.|+ |.+ +|.++++++.++.||+|+++||++.. .| |
T Consensus 213 ~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~-------------~G---g-- 273 (377)
T 2vhw_A 213 GRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAID-------------QG---G-- 273 (377)
T ss_dssp TSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGG-------------TT---C--
T ss_pred CeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCcceecHHHHhcCCCCcEEEEEecC-------------CC---C--
Confidence 110 00011236788899999999976 554 78899999999999999999999831 12 1
Q ss_pred eeccCC-CCCC-CCccccCCceE--EcCCCCCCcHHH-H--------HHHHHHHHHHHH-HHHcCCCCCCCCC
Q 016162 296 LDVFED-EPYM-KPGLSEMKNAI--VVPHIASASKWT-R--------EGMATLAALNVL-GKIKGYPIWGNPN 354 (394)
Q Consensus 296 lDV~~~-EP~~-~~~L~~~~nvi--lTPHia~~t~~~-~--------~~~~~~~~~ni~-~~l~g~~~~~~v~ 354 (394)
||+. ||.+ +.|++..+||+ +|||+++.+..+ . ..+..++.++.. .+..++++.+.+|
T Consensus 274 --v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~v~ 344 (377)
T 2vhw_A 274 --CFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAKGLS 344 (377)
T ss_dssp --SBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHTTEE
T ss_pred --ccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHHHHHHHhCChhhhhhcChHHhCcEE
Confidence 7887 8864 46899999998 999999988653 2 233333444433 4556667787776
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.81 E-value=4.7e-19 Score=176.48 Aligned_cols=303 Identities=15% Similarity=0.164 Sum_probs=188.5
Q ss_pred eeEEEeCCCCc--eEEEEeCCCCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHHH----------HhcCCCcEEEecC
Q 016162 5 VSIEVWNPNGK--YRVVSTKPMPGTRWINLLIEQDCRVEICTQKK--TILSVEDIIA----------LIGDKCDGVIGQL 70 (394)
Q Consensus 5 ~~~~~~~~~~~--~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~el~~----------~~~~~~d~ii~~~ 70 (394)
|+|-++++.+. .|| .+.| +..+.|.+.|+++.+..... ...+.++..+ .+ ++|+|+. .
T Consensus 1 m~ig~~~e~~~~e~Rv----~l~P-~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~--~ad~il~-v 72 (369)
T 2eez_A 1 MVIGVPKEIKTLENRV----ALTP-GGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW--GAEMVVK-V 72 (369)
T ss_dssp CEEEECCCCSTTCCCC----SSCH-HHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT--TSSEEEC-S
T ss_pred CEEEEEccCCCCCcee----CcCH-HHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee--cCCEEEE-E
Confidence 45566665543 222 3445 35788888999987643321 2456666664 33 4898774 4
Q ss_pred CccccHHHHHHhcccCCcEEEEcccCccccchhHHhhCCceEe---cCCCC-Cc----hhhHHHHH--HHHHHHHhchHH
Q 016162 71 TEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVG---NTPGV-LT----ETTAELAA--SLSLAAARRIVE 140 (394)
Q Consensus 71 ~~~i~~~~l~~l~~l~~k~I~~~g~G~d~id~~~a~~~gI~v~---n~p~~-~~----~~vAE~~l--~~~L~~~R~~~~ 140 (394)
..+..++ ++.++. +.++++....+.|..+++++.++||.+. +.+.. .. .++++.+- +.++++. .+..
T Consensus 73 k~p~~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~~-~l~~ 149 (369)
T 2eez_A 73 KEPLPEE-YGFLRE-GLILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGAQ-FLEK 149 (369)
T ss_dssp SCCCGGG-GGGCCT-TCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHHH-HTSG
T ss_pred CCCCHHH-HhhcCC-CcEEEEEecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHHH-HHHH
Confidence 4455444 555533 3488999899999999999999999998 55543 11 34455444 3333322 2221
Q ss_pred HHHHHHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCC
Q 016162 141 ADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ 220 (394)
Q Consensus 141 ~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 220 (394)
. ..|+. -|... ..++.+++++|+|.|.||+.+++.+ +++|++|+++|++.... +...+.+ +..
T Consensus 150 ~----~~g~~-~~~~~---~~~l~~~~V~ViGaG~iG~~~a~~l-~~~Ga~V~~~d~~~~~~-~~~~~~~-------g~~ 212 (369)
T 2eez_A 150 P----KGGRG-VLLGG---VPGVAPASVVILGGGTVGTNAAKIA-LGMGAQVTILDVNHKRL-QYLDDVF-------GGR 212 (369)
T ss_dssp G----GTSCC-CCTTC---BTBBCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHT-------TTS
T ss_pred h----cCCCc-eecCC---CCCCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHHhc-------Cce
Confidence 1 11210 12111 1368999999999999999999996 79999999999987542 2111111 111
Q ss_pred C-ccccccCCHHHHhcccCEEEEcCCCCh-hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeec
Q 016162 221 P-VTWKRASSMDEVLREADVISLHPVLDK-TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDV 298 (394)
Q Consensus 221 ~-~~~~~~~~l~ell~~aDiV~l~lPlt~-~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV 298 (394)
- .......++++++..+|+|+.|++... .+..++.++.++.||+|+++||++-. .| |+ +|+
T Consensus 213 ~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~ 275 (369)
T 2eez_A 213 VITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VET 275 (369)
T ss_dssp EEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC--------------------------
T ss_pred EEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCc
Confidence 0 000112357788999999999998765 57788899999999999999999831 12 44 999
Q ss_pred cCCCCCC-CCccccCCceE---------EcCCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016162 299 FEDEPYM-KPGLSEMKNAI---------VVPHIASA--SKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (394)
Q Consensus 299 ~~~EP~~-~~~L~~~~nvi---------lTPHia~~--t~~~~~~~~~~~~~ni~~~l~g~~~~~~v~ 354 (394)
+ ||.+ +.|++..+++. .|||+++. +.+....+..++.+++..++.++++.+.+|
T Consensus 276 ~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~~g~~~~~~~~~l~~~~~ 341 (369)
T 2eez_A 276 I--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAEKGLDALLEDAALLKGLN 341 (369)
T ss_dssp ------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCHHHHTTEE
T ss_pred c--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHhcChhhhhcChHHhcCEE
Confidence 8 6643 45788889999 88998885 456678888888888877888887888775
No 43
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.81 E-value=6.2e-21 Score=192.59 Aligned_cols=154 Identities=20% Similarity=0.261 Sum_probs=124.0
Q ss_pred ccc-cCCCeEEEEecChHHHHHHHHHHhc-CCcEEEEEc-CchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc
Q 016162 160 GNL-LKGQTVGVIGAGRIGSAYARMMVEG-FKMNLIYYD-LYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 160 g~~-l~gktvGIIGlG~IG~~vA~~la~~-~G~~V~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (394)
|.+ |+|+|+||+|+|+||+.+|+++ ++ |||+|++++ ++... | + ....+++++++.
T Consensus 206 G~~~l~gktvgI~G~G~VG~~vA~~l-~~~~G~kVv~~sD~~g~~--------~----~---------~~gvdl~~L~~~ 263 (419)
T 1gtm_A 206 GWDTLKGKTIAIQGYGNAGYYLAKIM-SEDFGMKVVAVSDSKGGI--------Y----N---------PDGLNADEVLKW 263 (419)
T ss_dssp TCSCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEE--------E----E---------EEEECHHHHHHH
T ss_pred CCcccCCCEEEEEcCCHHHHHHHHHH-HHhcCCEEEEEeCCCccc--------c----C---------ccCCCHHHHHHH
Confidence 356 9999999999999999999997 78 999999995 43210 0 0 011367777775
Q ss_pred cCE-EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC--CccccCC
Q 016162 237 ADV-ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK--PGLSEMK 313 (394)
Q Consensus 237 aDi-V~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~--~~L~~~~ 313 (394)
+|. .++ +|+ ++|++ |+.+.|..||+ .++||+|||.+||+++ +++|+++.|.+++ +||++. ++|+.++
T Consensus 264 ~d~~~~l-~~l-~~t~~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~ 333 (419)
T 1gtm_A 264 KNEHGSV-KDF-PGATN-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEK 333 (419)
T ss_dssp HHHHSSS-TTC-TTSEE-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHT
T ss_pred HHhcCEe-ecC-ccCee-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcC
Confidence 554 233 565 67888 89999999998 5999999999999999 6999999999988 899753 4899999
Q ss_pred ceEEcCCC----C-----------------CCcHHHHHHHHHHHHHHHHHHHc
Q 016162 314 NAIVVPHI----A-----------------SASKWTREGMATLAALNVLGKIK 345 (394)
Q Consensus 314 nvilTPHi----a-----------------~~t~~~~~~~~~~~~~ni~~~l~ 345 (394)
||++|||+ | +++.+..+++...+.+++.++++
T Consensus 334 ~V~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~ 386 (419)
T 1gtm_A 334 GILQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYN 386 (419)
T ss_dssp TCEEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 6 56677888888888888888773
No 44
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.77 E-value=1.8e-17 Score=166.83 Aligned_cols=156 Identities=20% Similarity=0.282 Sum_probs=115.3
Q ss_pred cccCccccc-hhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016162 93 MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (394)
Q Consensus 93 ~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGII 171 (394)
+++|+..+. .....+.+|+|.|++...+.+..+...+..-++.+.+. +. .+.++.|++|||+
T Consensus 155 TttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi~------ra-----------tg~~L~GktVgIi 217 (436)
T 3h9u_A 155 TTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIK------RA-----------TDVMIAGKTACVC 217 (436)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHHH------HH-----------HCCCCTTCEEEEE
T ss_pred cCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHHH------Hh-----------cCCcccCCEEEEE
Confidence 455654442 33455799999999876555544444433333322221 11 2357999999999
Q ss_pred ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhh
Q 016162 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (394)
Q Consensus 172 GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~ 251 (394)
|+|.||+.+|+++ ++|||+|+++|+++........ .| + ...++++++++||+|+++ +.|.
T Consensus 218 G~G~IG~~vA~~L-ka~Ga~Viv~D~~p~~a~~A~~---------~G-----~-~~~sL~eal~~ADVVilt----~gt~ 277 (436)
T 3h9u_A 218 GYGDVGKGCAAAL-RGFGARVVVTEVDPINALQAAM---------EG-----Y-QVLLVEDVVEEAHIFVTT----TGND 277 (436)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHH---------TT-----C-EECCHHHHTTTCSEEEEC----SSCS
T ss_pred eeCHHHHHHHHHH-HHCCCEEEEECCChhhhHHHHH---------hC-----C-eecCHHHHHhhCCEEEEC----CCCc
Confidence 9999999999997 8999999999998755332211 11 1 235899999999999963 4688
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHH
Q 016162 252 HLINKERLATMKKEAILVNCSRGPV-IDEVALVEH 285 (394)
Q Consensus 252 ~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~a 285 (394)
++|+++.|+.||+|++|||+|||.+ ||.++|.+.
T Consensus 278 ~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 278 DIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp CSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred CccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 9999999999999999999999997 999999864
No 45
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.73 E-value=3.1e-17 Score=165.14 Aligned_cols=229 Identities=14% Similarity=0.151 Sum_probs=152.3
Q ss_pred HHHHHHHhCCCeEEEecCCC--CCCCHHHHHHH---------hcCCCcEEEecCCccccHHHHHHh-cccCCcEEEEccc
Q 016162 28 RWINLLIEQDCRVEICTQKK--TILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAAL-SRAGGKAFSNMAV 95 (394)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~~--~~~~~~el~~~---------~~~~~d~ii~~~~~~i~~~~l~~l-~~l~~k~I~~~g~ 95 (394)
+..+.|.+.|++|.+..... ..++.++..+. +. ++|+|+.. ..+ +++.++.+ +.+ ++|+..+.
T Consensus 28 ~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~-~adiil~v-k~p-~~~~i~~l~~~~--~li~~~~~ 102 (401)
T 1x13_A 28 KTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVW-QSEIILKV-NAP-LDDEIALLNPGT--TLVSFIWP 102 (401)
T ss_dssp HHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGG-SSSEEECS-SCC-CHHHHTTCCTTC--EEEECCCG
T ss_pred HHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHh-cCCeEEEe-CCC-CHHHHHHhcCCC--cEEEEecC
Confidence 35778888899887654332 23466666543 33 38887754 333 46667776 444 99999999
Q ss_pred CccccchhHHhhCCceEecCCCCCchhhHHHHHHHH---HHHHhchHHHHHHHHcCcc--CCCCCCc--ccccccCCCeE
Q 016162 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLS---LAAARRIVEADEFMRAGLY--DGWLPNL--FVGNLLKGQTV 168 (394)
Q Consensus 96 G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~---L~~~R~~~~~~~~~~~g~~--~~w~~~~--~~g~~l~gktv 168 (394)
|+|++|++++.++||.+.+ .++|+|++.++. ++..+.+.. ...++.+.| ..|.... ..| ++.|++|
T Consensus 103 ~~d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g-~l~g~~V 175 (401)
T 1x13_A 103 AQNPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHEFGRFFTGQITAAG-KVPPAKV 175 (401)
T ss_dssp GGCHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTE-EECCCEE
T ss_pred CCCHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHhcccccCCceeecc-CcCCCEE
Confidence 9999999999999999964 555666655543 333333332 223333332 1121110 012 5889999
Q ss_pred EEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcccc---------------c-------
Q 016162 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK---------------R------- 226 (394)
Q Consensus 169 GIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~------- 226 (394)
+|+|+|.||..+++.+ +++|++|+++|++...... .+.+ |....... .
T Consensus 176 ~ViGaG~iG~~aa~~a-~~~Ga~V~v~D~~~~~~~~--~~~l-------Ga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 245 (401)
T 1x13_A 176 MVIGAGVAGLAAIGAA-NSLGAIVRAFDTRPEVKEQ--VQSM-------GAEFLELDFKEEAGSGDGYAKVMSDAFIKAE 245 (401)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECSCGGGHHH--HHHT-------TCEECCC--------CCHHHHHHSHHHHHHH
T ss_pred EEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHH--HHHc-------CCEEEEecccccccccccchhhccHHHHHHH
Confidence 9999999999999996 8999999999998764211 1111 11000000 0
Q ss_pred cCCHHHHhcccCEEEEc--CCCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccCH
Q 016162 227 ASSMDEVLREADVISLH--PVLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (394)
Q Consensus 227 ~~~l~ell~~aDiV~l~--lPlt~~t~~li~~~~l~~mk~gailIN~a--RG~~vde 279 (394)
..++++++..+|+|+.| +|. ..+.++++++.++.||+|+++||+| ||+.+++
T Consensus 246 ~~~l~e~~~~aDvVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 246 MELFAAQAKEVDIIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHHHHCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHHHHhCCCCEEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 01377888999999999 553 2366889999999999999999999 8887654
No 46
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.71 E-value=1.3e-16 Score=159.66 Aligned_cols=258 Identities=15% Similarity=0.171 Sum_probs=157.9
Q ss_pred eeEEEeCCCCc--eEEEEeCCCCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHH-----------HHhcCCCcEEEec
Q 016162 5 VSIEVWNPNGK--YRVVSTKPMPGTRWINLLIEQDCRVEICTQKK--TILSVEDII-----------ALIGDKCDGVIGQ 69 (394)
Q Consensus 5 ~~~~~~~~~~~--~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~el~-----------~~~~~~~d~ii~~ 69 (394)
|+|-|+++.+. .|| .+.| +..+.|.+.|+++.+..... ..++.++.. +.+. ++|+|+..
T Consensus 1 m~igv~~e~~~~E~Rv----~l~P-~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~-~adiil~v 74 (384)
T 1l7d_A 1 MKIAIPKERRPGEDRV----AISP-EVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALS-QADVVWKV 74 (384)
T ss_dssp CEEEECCCCSTTCCCC----SCCH-HHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHS-SCSEEEEE
T ss_pred CEEEEEccCCCCCccc----CCCH-HHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhc-CCCEEEEe
Confidence 45666666542 222 3444 35778888898886643321 234555554 3454 48988765
Q ss_pred CCccc----cHHHHHHhcccCCcEEEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHH
Q 016162 70 LTEDW----GETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFM 145 (394)
Q Consensus 70 ~~~~i----~~~~l~~l~~l~~k~I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~ 145 (394)
..++ +++.++.++. +.++++..+.+.|+.+++++.++||.+++. +...+.+++..+. +|+..+.+. .+..+
T Consensus 75 -~~p~~~~~~~~~i~~l~~-~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~a-g~~av 149 (384)
T 1l7d_A 75 -QRPMTAEEGTDEVALIKE-GAVLMCHLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNLA-GYRAV 149 (384)
T ss_dssp -ECCCCGGGSCCGGGGSCT-TCEEEEECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHHH-HHHHH
T ss_pred -cCcccccCCHHHHHhhcc-CCEEEEEecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHHH-HHHHH
Confidence 3344 6777788865 348888999999999999999999999984 2222222233333 233333321 22233
Q ss_pred HcCccC--CCCCCcccc-cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhh---hcC-
Q 016162 146 RAGLYD--GWLPNLFVG-NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---ANG- 218 (394)
Q Consensus 146 ~~g~~~--~w~~~~~~g-~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~- 218 (394)
..+.|. .|.+....+ .++.|++|+|+|+|.||..+++.+ +++|++|+++|++..... . ...++.... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a-~~~Ga~V~~~d~~~~~~~-~-~~~~Ga~~~~i~~~~~ 226 (384)
T 1l7d_A 150 IDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATA-KRLGAVVMATDVRAATKE-Q-VESLGGKFITVDDEAM 226 (384)
T ss_dssp HHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCSTTHH-H-HHHTTCEECCC-----
T ss_pred HHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-H-HHHcCCeEEeeccccc
Confidence 333331 122211112 368999999999999999999996 899999999999875421 1 111211000 000
Q ss_pred ---CCCcccccc----------CCHHHHhcccCEEEEcC--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCccc
Q 016162 219 ---EQPVTWKRA----------SSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVI 277 (394)
Q Consensus 219 ---~~~~~~~~~----------~~l~ell~~aDiV~l~l--Plt~~t~~li~~~~l~~mk~gailIN~a--RG~~v 277 (394)
...-++... ..+++++..+|+|+.|+ |.+ .+.++++++.++.||+|+++||++ ||+.+
T Consensus 227 ~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 227 KTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp ------------------CCHHHHHHHHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred ccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 000000000 11778889999999887 433 245788999999999999999999 76643
No 47
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.69 E-value=8.2e-17 Score=161.95 Aligned_cols=156 Identities=16% Similarity=0.211 Sum_probs=112.1
Q ss_pred EcccCccccc-hhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEE
Q 016162 92 NMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (394)
Q Consensus 92 ~~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGI 170 (394)
-+++|+-.+- ....-...+++.|+.. ++..+-+-....+.+.+..+. +| ..+.++.|||+||
T Consensus 190 eTtTGv~rL~~m~~~g~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI--~R-----------atg~~L~GKTVgV 252 (464)
T 3n58_A 190 ETTTGVNRLYQLQKKGLLPFPAINVND----SVTKSKFDNKYGCKESLVDGI--RR-----------GTDVMMAGKVAVV 252 (464)
T ss_dssp CSHHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHH--HH-----------HHCCCCTTCEEEE
T ss_pred ccccchHHHHHHHHcCCCCCCEEeecc----HhhhhhhhhhhcchHHHHHHH--HH-----------hcCCcccCCEEEE
Confidence 3456665442 2222346688888765 455554444444443333221 11 1346899999999
Q ss_pred EecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhh
Q 016162 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (394)
Q Consensus 171 IGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t 250 (394)
+|+|.||+.+|+++ ++|||+|+++|+++......... | + ...++++++++||+|+.+. .|
T Consensus 253 IG~G~IGr~vA~~l-rafGa~Viv~d~dp~~a~~A~~~---------G-----~-~vv~LeElL~~ADIVv~at----gt 312 (464)
T 3n58_A 253 CGYGDVGKGSAQSL-AGAGARVKVTEVDPICALQAAMD---------G-----F-EVVTLDDAASTADIVVTTT----GN 312 (464)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSHHHHHHHHHT---------T-----C-EECCHHHHGGGCSEEEECC----SS
T ss_pred ECcCHHHHHHHHHH-HHCCCEEEEEeCCcchhhHHHhc---------C-----c-eeccHHHHHhhCCEEEECC----CC
Confidence 99999999999996 89999999999887543222111 1 1 2358999999999999874 46
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH
Q 016162 251 YHLINKERLATMKKEAILVNCSRGPV-IDEVALVE 284 (394)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~ 284 (394)
.++|+++.|+.||+|++|||++||.+ ||.++|.+
T Consensus 313 ~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 313 KDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp SSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred ccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 89999999999999999999999998 99988873
No 48
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.66 E-value=2e-15 Score=151.69 Aligned_cols=154 Identities=18% Similarity=0.286 Sum_probs=107.5
Q ss_pred cccCccccc-hhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016162 93 MAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (394)
Q Consensus 93 ~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGII 171 (394)
+++|+-.+- ....-+..++|.|+.+..+.+--+-..+.--++...+ .+ ..+..+.|++++|+
T Consensus 164 TttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~s~~~gi------~r-----------at~~~L~GktV~Vi 226 (435)
T 3gvp_A 164 SVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRESILDGL------KR-----------TTDMMFGGKQVVVC 226 (435)
T ss_dssp CHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHHHHHHHH------HH-----------HHCCCCTTCEEEEE
T ss_pred cchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHHHHHHHH------HH-----------hhCceecCCEEEEE
Confidence 455554432 2223357799999887554443332222111111111 11 12457999999999
Q ss_pred ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhh
Q 016162 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (394)
Q Consensus 172 GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~ 251 (394)
|+|.||+.+|+++ ++|||+|+++|+++......... | + ...++++++++||+|++| +.|.
T Consensus 227 G~G~IGk~vA~~L-ra~Ga~Viv~D~dp~ra~~A~~~---------G-----~-~v~~Leeal~~ADIVi~a----tgt~ 286 (435)
T 3gvp_A 227 GYGEVGKGCCAAL-KAMGSIVYVTEIDPICALQACMD---------G-----F-RLVKLNEVIRQVDIVITC----TGNK 286 (435)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHHT---------T-----C-EECCHHHHTTTCSEEEEC----SSCS
T ss_pred eeCHHHHHHHHHH-HHCCCEEEEEeCChhhhHHHHHc---------C-----C-EeccHHHHHhcCCEEEEC----CCCc
Confidence 9999999999997 89999999999987543222111 1 1 235899999999999996 4678
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHH
Q 016162 252 HLINKERLATMKKEAILVNCSRGPV-IDEVALV 283 (394)
Q Consensus 252 ~li~~~~l~~mk~gailIN~aRG~~-vde~aL~ 283 (394)
++|+++.|+.||+|+++||+|||++ +|.++|.
T Consensus 287 ~lI~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 287 NVVTREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp CSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred ccCCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 9999999999999999999999998 7876663
No 49
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.65 E-value=8.9e-18 Score=169.20 Aligned_cols=217 Identities=13% Similarity=0.191 Sum_probs=156.7
Q ss_pred cEEEEcccCccccchhHHh-----hCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccC-CCCCCcccc-
Q 016162 88 KAFSNMAVGYNNVDVNAAN-----KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD-GWLPNLFVG- 160 (394)
Q Consensus 88 k~I~~~g~G~d~id~~~a~-----~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~-~w~~~~~~g- 160 (394)
+.|.+.|+|+|++++..+. ++++.+++.+|. ..+++++.+..++.+.|++....... .+.|. .|......+
T Consensus 83 ~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~ 160 (404)
T 1gpj_A 83 RHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAER 160 (404)
T ss_dssp HHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHH
T ss_pred hhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHH
Confidence 7788899999999999887 889999999998 56899999999999999876543222 22221 110000011
Q ss_pred --cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 161 --NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 161 --~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.++.|++|+|||+|.||+.+++.+ +.+|+ +|+++||+..+. ++..+.+ |.. .....++.+++..+
T Consensus 161 ~~~~l~g~~VlIiGaG~iG~~~a~~l-~~~G~~~V~v~~r~~~ra-~~la~~~-------g~~---~~~~~~l~~~l~~a 228 (404)
T 1gpj_A 161 ELGSLHDKTVLVVGAGEMGKTVAKSL-VDRGVRAVLVANRTYERA-VELARDL-------GGE---AVRFDELVDHLARS 228 (404)
T ss_dssp HHSCCTTCEEEEESCCHHHHHHHHHH-HHHCCSEEEEECSSHHHH-HHHHHHH-------TCE---ECCGGGHHHHHHTC
T ss_pred HhccccCCEEEEEChHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHc-------CCc---eecHHhHHHHhcCC
Confidence 157999999999999999999997 78999 999999987542 1111222 211 11234788889999
Q ss_pred CEEEEcCCCChhhhhcccHHHHhc--C----CCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCccc
Q 016162 238 DVISLHPVLDKTTYHLINKERLAT--M----KKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLS 310 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~--m----k~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~-~~~L~ 310 (394)
|+|+.|+|. +.++++.+.++. | +++.++||++ +|.. +++++
T Consensus 229 DvVi~at~~---~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~ 276 (404)
T 1gpj_A 229 DVVVSATAA---PHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVE 276 (404)
T ss_dssp SEEEECCSS---SSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGG
T ss_pred CEEEEccCC---CCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCcccc
Confidence 999999873 456677777776 3 2456666664 3552 56899
Q ss_pred cCCceEE--cCCCCCCcHHHHH----------HHHHHHHHHHHHHHcCCCCC
Q 016162 311 EMKNAIV--VPHIASASKWTRE----------GMATLAALNVLGKIKGYPIW 350 (394)
Q Consensus 311 ~~~nvil--TPHia~~t~~~~~----------~~~~~~~~ni~~~l~g~~~~ 350 (394)
++|||++ |||+++.+.++++ .+....++++..|+.+.+..
T Consensus 277 ~l~~v~l~d~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~~~ 328 (404)
T 1gpj_A 277 NIEDVEVRTIDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKLKER 328 (404)
T ss_dssp GSTTEEEEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEeHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence 9999999 9999998887654 56667778888888775543
No 50
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.33 E-value=1.8e-12 Score=125.66 Aligned_cols=119 Identities=13% Similarity=0.067 Sum_probs=92.0
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
..+....++|||||+|.||..+|+.| ...|.+|++|||++..... +...| .....+++++++.||
T Consensus 15 ~~~~~~m~~I~iIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~---------l~~~g-----~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 15 VPRGSHMMEVGFLGLGIMGKAMSMNL-LKNGFKVTVWNRTLSKCDE---------LVEHG-----ASVCESPAEVIKKCK 79 (310)
T ss_dssp ---CCCSCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGGHH---------HHHTT-----CEECSSHHHHHHHCS
T ss_pred CcccccCCEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHHHH---------HHHCC-----CeEcCCHHHHHHhCC
Confidence 33456678999999999999999998 5789999999998765321 11112 223568999999999
Q ss_pred EEEEcCCCChhhhhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 239 VISLHPVLDKTTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 239 iV~l~lPlt~~t~~li--~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
+|++|+|....+..++ .++.+..+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 135 (310)
T 3doj_A 80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR 135 (310)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 9999999666666665 24566789999999999999998889999988775443
No 51
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.33 E-value=1.8e-12 Score=125.42 Aligned_cols=115 Identities=21% Similarity=0.230 Sum_probs=93.8
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++||+||+|.||..+|++| ..-|.+|++|||++++..+ +...| .....++.|+++.||+|++|+|
T Consensus 4 ~kIgfIGlG~MG~~mA~~L-~~~G~~v~v~dr~~~~~~~---------l~~~G-----a~~a~s~~e~~~~~dvv~~~l~ 68 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNL-LKAGYLLNVFDLVQSAVDG---------LVAAG-----ASAARSARDAVQGADVVISMLP 68 (300)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSSHHHHHH---------HHHTT-----CEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEeeehHHHHHHHHHH-HhCCCeEEEEcCCHHHHHH---------HHHcC-----CEEcCCHHHHHhcCCceeecCC
Confidence 6899999999999999998 5779999999999865322 11222 2345799999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEee
Q 016162 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD 297 (394)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalD 297 (394)
..+..+.++. ...++.+++|.++||+++..+-+...+.+.+++..+ ..+|
T Consensus 69 ~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~--~~lD 120 (300)
T 3obb_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL--AMLD 120 (300)
T ss_dssp CHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC--EEEE
T ss_pred chHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC--EEEe
Confidence 8888887763 347889999999999999999999999999998754 3455
No 52
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.30 E-value=1.9e-10 Score=114.23 Aligned_cols=249 Identities=13% Similarity=0.132 Sum_probs=135.8
Q ss_pred eCCCCceEEEEeCC---------CCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHHHHhc-----CCCcEEEecCCcc
Q 016162 10 WNPNGKYRVVSTKP---------MPGTRWINLLIEQDCRVEICTQKK--TILSVEDIIALIG-----DKCDGVIGQLTED 73 (394)
Q Consensus 10 ~~~~~~~~vlv~~~---------~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~el~~~~~-----~~~d~ii~~~~~~ 73 (394)
..|-++|+|=|.+. +.| +..+.|.+.|++|.+..... ...+.++..+.=. +.+|.|+. ...
T Consensus 17 ~~~~~~m~IgvpkE~~~~E~RValtP-~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlk-Vk~- 93 (381)
T 3p2y_A 17 QGPGSMTLIGVPRESAEGERRVALVP-KVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVK-VNP- 93 (381)
T ss_dssp ---CTTCEEEECCCCSTTCCCCSSCH-HHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEEC-SSC-
T ss_pred cCCCcceEEEEEecCCCCCceecCCH-HHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEE-eCC-
Confidence 34555666655332 223 35788888999987655432 3456666543210 12565553 332
Q ss_pred ccHHHHHHhcccCCcEEEEcccCccccchhHHhhCCceEec---CCCCC-ch------hhHHHHHHHHHHHHhchHHHHH
Q 016162 74 WGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGN---TPGVL-TE------TTAELAASLSLAAARRIVEADE 143 (394)
Q Consensus 74 i~~~~l~~l~~l~~k~I~~~g~G~d~id~~~a~~~gI~v~n---~p~~~-~~------~vAE~~l~~~L~~~R~~~~~~~ 143 (394)
.+++-++.+.. |-.+++....-.|.=-++++.++||...- .|... +. +++|.+=.+.. ..+..
T Consensus 94 p~~~e~~~l~~-g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av------~~aa~ 166 (381)
T 3p2y_A 94 PTSDEISQLKP-GSVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAV------LLGAS 166 (381)
T ss_dssp CCHHHHTTSCT-TCEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHH------HHHHH
T ss_pred CChhHHhhccC-CCEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHH------HHHHH
Confidence 33455566654 22333333333333345677889988854 33211 11 22222221111 11110
Q ss_pred HHHcCccCCCCCCcccc-cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhh-----c
Q 016162 144 FMRAGLYDGWLPNLFVG-NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-----N 217 (394)
Q Consensus 144 ~~~~g~~~~w~~~~~~g-~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~-----~ 217 (394)
.-++. .+....+ ..+.+++|+|||+|.||..+|+.+ +++|++|++||+++... +. .+.++..... .
T Consensus 167 --~l~~~---~~~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l-~~-~~~lGa~~~~l~~~~~ 238 (381)
T 3p2y_A 167 --LSTRF---VPMLTTAAGTVKPASALVLGVGVAGLQALATA-KRLGAKTTGYDVRPEVA-EQ-VRSVGAQWLDLGIDAA 238 (381)
T ss_dssp --HCSSC---SSCEECSSCEECCCEEEEESCSHHHHHHHHHH-HHHTCEEEEECSSGGGH-HH-HHHTTCEECCCC----
T ss_pred --Hhhhh---hhhhhcccCCcCCCEEEEECchHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH-HHHcCCeEEecccccc
Confidence 11111 1111111 257899999999999999999996 89999999999998642 11 1111100000 0
Q ss_pred CCCCc--------cccccCCHHHHhcccCEEEEcC--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCccc
Q 016162 218 GEQPV--------TWKRASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVI 277 (394)
Q Consensus 218 ~~~~~--------~~~~~~~l~ell~~aDiV~l~l--Plt~~t~~li~~~~l~~mk~gailIN~a--RG~~v 277 (394)
+.... ......++++.++++|+|+.++ |. ..+..+++++.++.||||++|||+| +|+.+
T Consensus 239 ~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 239 GEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp ---------CHHHHHHHHHHHHHHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred ccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 00000 0001236788999999999875 53 3456789999999999999999997 55544
No 53
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.29 E-value=3.8e-12 Score=122.96 Aligned_cols=114 Identities=12% Similarity=0.120 Sum_probs=89.8
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||..+|++| ..-|.+|++|||++++..+ +... +.....++.|+++.||+|++|+|
T Consensus 6 ~kIgfIGLG~MG~~mA~~L-~~~G~~V~v~dr~~~~~~~---------l~~~-----G~~~~~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEIL-LEAGYELVVWNRTASKAEP---------LTKL-----GATVVENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEC-------CT---------TTTT-----TCEECSSGGGGCCTTCEEEECCS
T ss_pred CcEEEEecHHHHHHHHHHH-HHCCCeEEEEeCCHHHHHH---------HHHc-----CCeEeCCHHHHHhcCCceeeecc
Confidence 5899999999999999998 5779999999998765211 1111 23345789999999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
..+.....+....+..++++.++||+++..+-+.+.+.+.+.+..+...
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~l 119 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYV 119 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred chhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCcee
Confidence 8777888888888999999999999999999999999999998765433
No 54
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.28 E-value=8e-12 Score=121.67 Aligned_cols=118 Identities=14% Similarity=0.114 Sum_probs=93.4
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
....++|||||+|.||+.+|+.| ...|.+|++|||++..... +...| .....++++++++||+|+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~---------l~~~g-----~~~~~~~~e~~~~aDvVi 92 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRL-CEAGYALQVWNRTPARAAS---------LAALG-----ATIHEQARAAARDADIVV 92 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHTTT-----CEEESSHHHHHTTCSEEE
T ss_pred ccCCCEEEEECccHHHHHHHHHH-HhCCCeEEEEcCCHHHHHH---------HHHCC-----CEeeCCHHHHHhcCCEEE
Confidence 34667999999999999999998 5789999999998765321 11112 233568999999999999
Q ss_pred EcCCCChhhhhcccH-HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 242 LHPVLDKTTYHLINK-ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 242 l~lPlt~~t~~li~~-~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
+|+|....+..++.. +.+..+++|.++||++++.+.+.+.+.+.+.+..+...
T Consensus 93 ~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~ 146 (320)
T 4dll_A 93 SMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHL 146 (320)
T ss_dssp ECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEE
Confidence 999976677766643 56778999999999999999999999999987655443
No 55
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.28 E-value=2.3e-11 Score=118.02 Aligned_cols=131 Identities=15% Similarity=0.075 Sum_probs=85.1
Q ss_pred HHHHHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCch-hhHHHHHHHhhhhhhhhcCC
Q 016162 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGE 219 (394)
Q Consensus 142 ~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~ 219 (394)
+++++.+.|.+|.+.. .......++|||||+|.||+.+|+.| ...|. +|++||+++ ....+.. ...|
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~I~iIG~G~mG~~~A~~L-~~~G~~~V~~~dr~~~~~~~~~~--------~~~g- 70 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTEN-LYFQSNAMKLGFIGFGEAASAIASGL-RQAGAIDMAAYDAASAESWRPRA--------EELG- 70 (312)
T ss_dssp ------------------------CEEEEECCSHHHHHHHHHH-HHHSCCEEEEECSSCHHHHHHHH--------HHTT-
T ss_pred CcccccccccccCccc-ccccCCCCEEEEECccHHHHHHHHHH-HHCCCCeEEEEcCCCCHHHHHHH--------HHCC-
Confidence 3456777775554322 22334567999999999999999998 56788 999999973 3322221 1122
Q ss_pred CCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 220 QPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 220 ~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
.....++++++++||+|++|+|...... .+ .+....++++.++||+++..+....++.+.+.+.
T Consensus 71 ----~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 71 ----VSCKASVAEVAGECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp ----CEECSCHHHHHHHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred ----CEEeCCHHHHHhcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 2234689999999999999999665544 33 6677889999999999999999999999988765
No 56
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.28 E-value=5e-12 Score=122.36 Aligned_cols=117 Identities=15% Similarity=0.134 Sum_probs=93.1
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.+...++|||||+|.||+.+|+.| ...|.+|++|||++..... . ...| .....++++++++||+|
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~-~--------~~~g-----~~~~~~~~e~~~~aDvV 69 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVL-LKQGKRVAIWNRSPGKAAA-L--------VAAG-----AHLCESVKAALSASPAT 69 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSHHHHHH-H--------HHHT-----CEECSSHHHHHHHSSEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-H--------HHCC-----CeecCCHHHHHhcCCEE
Confidence 356678999999999999999998 5789999999998865322 1 1112 12346899999999999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
++|+|....++.++.++.+..+++|.++||+++..+.+.+++.+.+++..+.
T Consensus 70 i~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 70 IFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp EECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE
T ss_pred EEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 9999976667877754346667899999999999999999999999875443
No 57
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.28 E-value=4.2e-11 Score=116.53 Aligned_cols=153 Identities=16% Similarity=0.123 Sum_probs=100.6
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHH-HhcccC
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VLREAD 238 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-ll~~aD 238 (394)
++..++|||||+|.||+.+|+.| +..|. +|++||++....... ...|... ....++++ ++++||
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l-~~~G~~~~V~~~dr~~~~~~~a---------~~~G~~~---~~~~~~~~~~~~~aD 96 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISKA---------VDLGIID---EGTTSIAKVEDFSPD 96 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHHH---------HHTTSCS---EEESCTTGGGGGCCS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCCCEEEEEECCHHHHHHH---------HHCCCcc---hhcCCHHHHhhccCC
Confidence 34558999999999999999998 67788 999999987643211 1122211 12357788 899999
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCC---CC-CCCccccCCc
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE---PY-MKPGLSEMKN 314 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~E---P~-~~~~L~~~~n 314 (394)
+|++|+|.. .+..++ ++....+++++++++++.......+++.+.+.. ++.+.. =++..| |. ....|+....
T Consensus 97 vVilavp~~-~~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~h-Pm~G~e~sG~~~A~~~Lf~g~~ 172 (314)
T 3ggo_A 97 FVMLSSPVR-TFREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGGH-PIAGTEKSGVEYSLDNLYEGKK 172 (314)
T ss_dssp EEEECSCGG-GHHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECEE-ECCCCCCCSGGGCCTTTTTTCE
T ss_pred EEEEeCCHH-HHHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEecC-cccCCcccchhhhhhhhhcCCE
Confidence 999999954 344444 566777999999999988765445566666543 211110 122222 11 1235788889
Q ss_pred eEEcCCCCCCcHHHHHHH
Q 016162 315 AIVVPHIASASKWTREGM 332 (394)
Q Consensus 315 vilTPHia~~t~~~~~~~ 332 (394)
+++||+ .+.+.++.+.+
T Consensus 173 ~il~~~-~~~~~~~~~~v 189 (314)
T 3ggo_A 173 VILTPT-KKTDKKRLKLV 189 (314)
T ss_dssp EEECCC-TTSCHHHHHHH
T ss_pred EEEEeC-CCCCHHHHHHH
Confidence 999998 34455554443
No 58
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.24 E-value=2.2e-11 Score=120.16 Aligned_cols=108 Identities=23% Similarity=0.304 Sum_probs=87.3
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-ccCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (394)
++.||||+|+|+|+||+.+|+++ +++||+|+++|++... .++.+.+ + . ...+.++++. .||++
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l-~~~GakVvvsD~~~~~--~~~a~~~-------g-----a-~~v~~~ell~~~~DIl 235 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLA-AEAGAQLLVADTDTER--VAHAVAL-------G-----H-TAVALEDVLSTPCDVF 235 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH--HHHHHHT-------T-----C-EECCGGGGGGCCCSEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEeCCccH--HHHHHhc-------C-----C-EEeChHHhhcCcccee
Confidence 79999999999999999999997 7999999999998643 2222222 1 1 1236678887 99999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
+-| .+.++|+++.++.|| ..+++|.+|+.+.+++| .++|+++.+.
T Consensus 236 iP~-----A~~~~I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 236 APC-----AMGGVITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp EEC-----SCSCCBCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred cHh-----HHHhhcCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 854 578899999999998 78999999999999888 5888888643
No 59
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.23 E-value=6.2e-11 Score=112.65 Aligned_cols=142 Identities=17% Similarity=0.149 Sum_probs=97.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV~l 242 (394)
++|||||+|.||+.+|+.+ ...|. +|++||++...... . ...|... ....++++.++ +||+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l-~~~g~~~~V~~~d~~~~~~~~-~--------~~~g~~~---~~~~~~~~~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISK-A--------VDLGIID---EGTTSIAKVEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHH-H--------HHTTSCS---EEESCGGGGGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHH-HhcCCCcEEEEEeCCHHHHHH-H--------HHCCCcc---cccCCHHHHhcCCCCEEEE
Confidence 5899999999999999998 57777 99999998754321 1 1112211 11347778889 9999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCC---C-CCCccccCCceEEc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP---Y-MKPGLSEMKNAIVV 318 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP---~-~~~~L~~~~nvilT 318 (394)
|+|.. .+..++ .+....+++++++++++++.....+.+.+.+.++.+.+ .-++..|. . ...+|+...+++++
T Consensus 69 avp~~-~~~~v~-~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~ 144 (281)
T 2g5c_A 69 SSPVR-TFREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILT 144 (281)
T ss_dssp CSCHH-HHHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEEC
T ss_pred cCCHH-HHHHHH-HHHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEe
Confidence 99943 455555 34566789999999999888766677887776531111 11232232 1 12357777889999
Q ss_pred CCCCCC
Q 016162 319 PHIASA 324 (394)
Q Consensus 319 PHia~~ 324 (394)
||.++.
T Consensus 145 ~~~~~~ 150 (281)
T 2g5c_A 145 PTKKTD 150 (281)
T ss_dssp CCSSSC
T ss_pred cCCCCC
Confidence 997654
No 60
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.22 E-value=3.9e-11 Score=118.85 Aligned_cols=122 Identities=16% Similarity=0.275 Sum_probs=96.4
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc---CE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA---DV 239 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a---Di 239 (394)
+.+++|||||+|.||+.+|+.| ...|.+|++||+++..... +...+ .....+++++++.+ |+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L-~~~G~~V~v~dr~~~~~~~---------l~~~g-----~~~~~s~~e~~~~a~~~Dv 84 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRL-RKGGHECVVYDLNVNAVQA---------LEREG-----IAGARSIEEFCAKLVKPRV 84 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHTTT-----CBCCSSHHHHHHHSCSSCE
T ss_pred hcCCEEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHHHH---------HHHCC-----CEEeCCHHHHHhcCCCCCE
Confidence 5678999999999999999998 5789999999998765321 11112 22346899999999 99
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCC
Q 016162 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~ 301 (394)
|++|+|.. .+..++ .+.+..+++|.++||++++...+...+.+.+.+..+......|+..
T Consensus 85 Vi~~vp~~-~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 85 VWLMVPAA-VVDSML-QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp EEECSCGG-GHHHHH-HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred EEEeCCHH-HHHHHH-HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 99999966 677766 5677889999999999999999999999999887766555555543
No 61
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.21 E-value=3.1e-10 Score=108.44 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=104.4
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhh---hhhhhcC--CCC-------ccccccCCHHHH
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYG---QFLKANG--EQP-------VTWKRASSMDEV 233 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~---~~~~~~~--~~~-------~~~~~~~~l~el 233 (394)
++|+|||.|.||+.+|+.+ ...|++|++||++.+.... ..+... ......+ ... .......++++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~l-a~~G~~V~l~d~~~~~~~~-~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQT-AFHGFAVTAYDINTDALDA-AKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHHHH-HHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCeEEEEeCCHHHHHH-HHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 6899999999999999998 5789999999998765321 111100 0000001 000 001234688899
Q ss_pred hcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCC
Q 016162 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK 313 (394)
Q Consensus 234 l~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~ 313 (394)
+++||+|+.++|.+.+....+-++....+++++++++.+.+ +...+|.+++... ....++..|. |.+.++
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~-------p~~~~~ 152 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN-------HVWVNN 152 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS-------STTTSC
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC-------CcccCc
Confidence 99999999999988777766667778889999999965544 3567888877643 3566776653 345667
Q ss_pred ceEEcCCCCCCcHHHHHHH
Q 016162 314 NAIVVPHIASASKWTREGM 332 (394)
Q Consensus 314 nvilTPHia~~t~~~~~~~ 332 (394)
.+.++|| ...+.++.+.+
T Consensus 153 lvevv~~-~~t~~~~~~~~ 170 (283)
T 4e12_A 153 TAEVMGT-TKTDPEVYQQV 170 (283)
T ss_dssp EEEEEEC-TTSCHHHHHHH
T ss_pred eEEEEeC-CCCCHHHHHHH
Confidence 8899998 34455554443
No 62
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.19 E-value=2.3e-11 Score=117.09 Aligned_cols=119 Identities=23% Similarity=0.258 Sum_probs=93.0
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.++|||||+|.||+.+|+.| ...|.+|++||+++..... +...+ .....+++++++ ||+|++|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g-----~~~~~~~~~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRM-TEWPGGVTVYDIRIEAMTP---------LAEAG-----ATLADSVADVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHH-TTSTTCEEEECSSTTTSHH---------HHHTT-----CEECSSHHHHTT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHH-HHCCCeEEEEeCCHHHHHH---------HHHCC-----CEEcCCHHHHHh-CCEEEEEC
Confidence 36899999999999999998 6789999999998765221 11112 223568999999 99999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~ 300 (394)
|....++.++ ++.+..+++|.++||+++..+...+.+.+.+.+..+......|+.
T Consensus 79 p~~~~~~~v~-~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g 133 (296)
T 3qha_A 79 LDDAQVREVV-GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSG 133 (296)
T ss_dssp SSHHHHHHHH-HHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEES
T ss_pred CChHHHHHHH-HHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcC
Confidence 9766777777 677888999999999999999999999999987554443333443
No 63
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.18 E-value=3e-11 Score=115.50 Aligned_cols=112 Identities=19% Similarity=0.094 Sum_probs=89.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||+.+|+.| ...|.+|++|||++..... +...+ .....++++++++||+|++|+|
T Consensus 2 ~~i~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g-----~~~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNL-VKAGCSVTIWNRSPEKAEE---------LAALG-----AERAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGGHH---------HHHTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HHCCCeEEEEcCCHHHHHH---------HHHCC-----CeecCCHHHHHhcCCEEEEEcC
Confidence 6899999999999999998 5789999999998765321 11112 2335689999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
....+..++. ++.+..+++|.++||+++..+.+.+.+.+.+++..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 6666766662 5566789999999999999999999999988876444
No 64
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.18 E-value=6e-11 Score=112.19 Aligned_cols=196 Identities=17% Similarity=0.126 Sum_probs=125.1
Q ss_pred HHHHHhCCCeEEEecCCCCCCCHHHHHHHhcC---CCcEEEecCCccccHHHHHHhcccCCcEEEEcccCccccchhHHh
Q 016162 30 INLLIEQDCRVEICTQKKTILSVEDIIALIGD---KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (394)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~---~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g~G~d~id~~~a~ 106 (394)
-..+++.|.+..+... ..+++++.+.+.. .++++.+. .+..++++..++++ +-+++...|+|.++.
T Consensus 21 ~~~~~~~g~~~~y~~~---~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~~~l--~~~a~~~gavn~i~~---- 89 (263)
T 2d5c_A 21 AFALESLGLEGSYEAW---DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHLDWV--SPEAQRIGAVNTVLQ---- 89 (263)
T ss_dssp HHHHHHTTCCEEEEEE---ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHHcCCCCEEEEE---eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHHHHH--hHHHHHhCCCCcEEc----
Confidence 3456667776655433 1245555554431 14444443 34557777777766 666677778888865
Q ss_pred hCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHh
Q 016162 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (394)
Q Consensus 107 ~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~ 186 (394)
+.| +..|+|+.. .+++.++.| . +.+++| +++|||+|.||+.+++.| .
T Consensus 90 ~~g----~~~g~ntd~-----~g~~~~l~~----------~------------~~~l~~-~v~iiG~G~~g~~~a~~l-~ 136 (263)
T 2d5c_A 90 VEG----RLFGFNTDA-----PGFLEALKA----------G------------GIPLKG-PALVLGAGGAGRAVAFAL-R 136 (263)
T ss_dssp ETT----EEEEECCHH-----HHHHHHHHH----------T------------TCCCCS-CEEEECCSHHHHHHHHHH-H
T ss_pred cCC----eEEEeCCCH-----HHHHHHHHH----------h------------CCCCCC-eEEEECCcHHHHHHHHHH-H
Confidence 234 223555543 244444332 1 236889 999999999999999997 6
Q ss_pred cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCCh--hhhhcccHHHHhcCCC
Q 016162 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK--TTYHLINKERLATMKK 264 (394)
Q Consensus 187 ~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~--~t~~li~~~~l~~mk~ 264 (394)
..|++|+++||+.... ++..+.+ +. . ..+++++ +++|+|++|+|... .+...+. ...+++
T Consensus 137 ~~g~~v~v~~r~~~~~-~~l~~~~-------~~-----~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~ 198 (263)
T 2d5c_A 137 EAGLEVWVWNRTPQRA-LALAEEF-------GL-----R-AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPE 198 (263)
T ss_dssp HTTCCEEEECSSHHHH-HHHHHHH-------TC-----E-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCS
T ss_pred HCCCEEEEEECCHHHH-HHHHHHh-------cc-----c-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCC
Confidence 7889999999987542 2222222 11 1 2467788 99999999999662 2223443 466899
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 265 EAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 265 gailIN~aRG~~vde~aL~~aL~~g 289 (394)
|++++|++.+. .++ .|.+++++.
T Consensus 199 g~~viD~~~~p-~~t-~l~~~a~~~ 221 (263)
T 2d5c_A 199 EGAAVDLVYRP-LWT-RFLREAKAK 221 (263)
T ss_dssp SSEEEESCCSS-SSC-HHHHHHHHT
T ss_pred CCEEEEeecCC-ccc-HHHHHHHHC
Confidence 99999999874 344 477776653
No 65
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.15 E-value=1.7e-10 Score=118.35 Aligned_cols=125 Identities=16% Similarity=0.190 Sum_probs=96.2
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc---ccCEEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVIS 241 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~aDiV~ 241 (394)
.++|||||+|.||+.+|+.| ...|.+|++|||++....+ . ...+..+.......+++|+++ .+|+|+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L-~~~G~~V~v~dr~~~~~~~-l--------~~~g~~g~~i~~~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNM-NDHGFVVCAFNRTVSKVDD-F--------LANEAKGTKVVGAQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSTHHHHH-H--------HHTTTTTSSCEECSSHHHHHHTBCSSCEEE
T ss_pred CCEEEEEChhHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-H--------HhcccCCCceeccCCHHHHHhhccCCCEEE
Confidence 35899999999999999998 5789999999999865322 1 111111112222468999887 499999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~ 300 (394)
+++|..+.+..++ ++.+..+++|.++||++++...+...+.+.+.+..+.....-|..
T Consensus 74 l~Vp~~~~v~~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 74 LLVKAGQAVDDFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp ECSCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred EecCChHHHHHHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 9999877777777 677888999999999999999999999999988766555444544
No 66
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.15 E-value=9.7e-11 Score=113.97 Aligned_cols=114 Identities=16% Similarity=0.071 Sum_probs=86.4
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCC-cEEEEEcCchh--hHHHHHHHhhhhhhhhcCCCCccccccC-CHHHHhcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDEVLREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G-~~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ell~~aDiV 240 (394)
.++|||||+|.||..+|+.| ...| .+|++||+++. ...++..+. +...|. .. ++++++++||+|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L-~~~G~~~V~~~dr~~~~~~~~~~~~~~----~~~~g~-------~~~s~~e~~~~aDvV 91 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGL-GGRNAARLAAYDLRFNDPAASGALRAR----AAELGV-------EPLDDVAGIACADVV 91 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECGGGGCTTTHHHHHHH----HHHTTC-------EEESSGGGGGGCSEE
T ss_pred CCeEEEECccHHHHHHHHHH-HHcCCCeEEEEeCCCccccchHHHHHH----HHHCCC-------CCCCHHHHHhcCCEE
Confidence 36899999999999999998 5889 99999999862 000011110 111221 35 778899999999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
++|+|.......+ .+....++++.++||+++..+...+.+.+.+++..+.
T Consensus 92 i~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~ 141 (317)
T 4ezb_A 92 LSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGS 141 (317)
T ss_dssp EECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCE
T ss_pred EEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 9999966555443 6677889999999999999999999999999876443
No 67
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.15 E-value=3e-11 Score=115.43 Aligned_cols=112 Identities=16% Similarity=0.085 Sum_probs=88.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||+.+|+.| ...|.+|++|||++..... . ...| .....++++++++||+|++|+|
T Consensus 2 ~~I~iiG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~-~--------~~~g-----~~~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANL-VRAGFDVTVWNRNPAKCAP-L--------VALG-----ARQASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCEEEECCSTTHHHHHHHH-HHHTCCEEEECSSGGGGHH-H--------HHHT-----CEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEccCHHHHHHHHHH-HHCCCeEEEEcCCHHHHHH-H--------HHCC-----CeecCCHHHHHHcCCEEEEEcC
Confidence 4899999999999999998 5679999999998765321 1 1112 2234689999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
....++.++. ++.+..+++|.++||++++.+.+.+.+.+.+.+..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 67 DPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 6657766652 4566789999999999999999899999988875443
No 68
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.13 E-value=3.8e-11 Score=115.81 Aligned_cols=113 Identities=19% Similarity=0.150 Sum_probs=88.6
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc-cCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR-ASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ell~~aDiV~l~ 243 (394)
.++|||||+|.||+.+|+.| ...|.+|++|||++..... +...|. .. ..+++++++.||+|++|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g~-----~~~~~~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSC-LRAGLSTWGADLNPQACAN---------LLAEGA-----CGAAASAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHHTTC-----SEEESSSTTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHHHH---------HHHcCC-----ccccCCHHHHHhcCCEEEEE
Confidence 46899999999999999998 5789999999998765321 111221 12 45788999999999999
Q ss_pred CCCChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 244 PVLDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 244 lPlt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
+|....++.++. ++.+..+++|.++||+++..+...+.+.+.+.+..+.
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 996666666653 4556789999999999999998889999988875443
No 69
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.13 E-value=1.1e-10 Score=112.60 Aligned_cols=119 Identities=13% Similarity=0.165 Sum_probs=86.4
Q ss_pred CCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.++||||| +|.||+.+|+.| ...|.+|++||++.. .++++.++.||+|++|
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l-~~~G~~V~~~~~~~~---------------------------~~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYL-RASGYPISILDREDW---------------------------AVAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHH-HTTTCCEEEECTTCG---------------------------GGHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHH-HhCCCeEEEEECCcc---------------------------cCHHHHhcCCCEEEEe
Confidence 56899999 999999999998 688999999998642 1466788999999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC--CCccccCCceEEcCCC
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM--KPGLSEMKNAIVVPHI 321 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~--~~~L~~~~nvilTPHi 321 (394)
+|.. .+..++ ++....++++++++++++......+++.+.+ + .++....|.. ..+++....+++|||-
T Consensus 73 vp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~------~~~v~~hP~~g~~~~~~~g~~~~l~~~~ 142 (298)
T 2pv7_A 73 VPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH--T------GAVLGLHPMFGADIASMAKQVVVRCDGR 142 (298)
T ss_dssp SCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--S------SEEEEEEECSCTTCSCCTTCEEEEEEEE
T ss_pred CCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--C------CCEEeeCCCCCCCchhhcCCeEEEecCC
Confidence 9954 466666 4455678999999999876653334443332 1 2344445642 2346666689999974
No 70
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.12 E-value=6.1e-11 Score=111.05 Aligned_cols=109 Identities=11% Similarity=0.152 Sum_probs=66.6
Q ss_pred ccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhH-------------HHHHHHhhhhhhh
Q 016162 149 LYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATR-------------LEKFVTAYGQFLK 215 (394)
Q Consensus 149 ~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~-------------~~~~~~~~~~~~~ 215 (394)
+|..|........++.+++|||||+|.||+.+|+.| ...|.+|++|||++... ...+ ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L-~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-------~~ 74 (245)
T 3dtt_A 3 SDKIHHHHHHENLYFQGMKIAVLGTGTVGRTMAGAL-ADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQW-------LP 74 (245)
T ss_dssp ----------------CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHTCC-------CCHHHH-------GG
T ss_pred cccccccccccccccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHH-------Hh
Confidence 344454444566789999999999999999999998 57899999999987641 1111 01
Q ss_pred hcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHH-HhcCCCCcEEEEcCC
Q 016162 216 ANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSR 273 (394)
Q Consensus 216 ~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~-l~~mk~gailIN~aR 273 (394)
..+ .....++++++++||+|++|+|..... ..+. +. ...+ ++.++||++-
T Consensus 75 ~~~-----~~~~~~~~e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 75 EHP-----HVHLAAFADVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp GST-----TCEEEEHHHHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECCC
T ss_pred hcC-----ceeccCHHHHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECCC
Confidence 111 112458899999999999999955433 3332 22 2233 7999999993
No 71
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.12 E-value=5.8e-11 Score=116.62 Aligned_cols=136 Identities=20% Similarity=0.179 Sum_probs=93.2
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
..+.+++|||||+|+||+++|+.| +..|++|+++|++.....+. ....|. .. .++++++++||+|
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L-~~~G~~V~~~~~~~~~~~~~--------a~~~G~-----~~-~~~~e~~~~aDvV 76 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNL-KDSGVDVTVGLRSGSATVAK--------AEAHGL-----KV-ADVKTAVAAADVV 76 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHH-HHTTCCEEEECCTTCHHHHH--------HHHTTC-----EE-ECHHHHHHTCSEE
T ss_pred chhcCCEEEEECchHHHHHHHHHH-HHCcCEEEEEECChHHHHHH--------HHHCCC-----EE-ccHHHHHhcCCEE
Confidence 468899999999999999999998 67899999999986542221 111121 12 2888999999999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc-eEEeeccCCCCCCC-C---cccc---C
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF-RVGLDVFEDEPYMK-P---GLSE---M 312 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~-gaalDV~~~EP~~~-~---~L~~---~ 312 (394)
++|+|.. ....++.++....+++|+++++++ + ++. .. +.+. ..++||+..+|... . .++. .
T Consensus 77 ilavp~~-~~~~v~~~~i~~~l~~~~ivi~~~--g-v~~--~~-----~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g 145 (338)
T 1np3_A 77 MILTPDE-FQGRLYKEEIEPNLKKGATLAFAH--G-FSI--HY-----NQVVPRADLDVIMIAPKAPGHTVRSEFVKGGG 145 (338)
T ss_dssp EECSCHH-HHHHHHHHHTGGGCCTTCEEEESC--C-HHH--HT-----TSSCCCTTCEEEEEEESSCSHHHHHHHHTTCC
T ss_pred EEeCCcH-HHHHHHHHHHHhhCCCCCEEEEcC--C-chh--HH-----HhhcCCCCcEEEeccCCCCchhHHHHHhccCC
Confidence 9999943 345565546667899999999874 2 221 11 1222 34567777777422 1 2444 5
Q ss_pred CceEEcCCCC
Q 016162 313 KNAIVVPHIA 322 (394)
Q Consensus 313 ~nvilTPHia 322 (394)
.++++|||-.
T Consensus 146 ~~~ii~~~~~ 155 (338)
T 1np3_A 146 IPDLIAIYQD 155 (338)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEecCC
Confidence 6789999954
No 72
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.12 E-value=1.1e-10 Score=112.25 Aligned_cols=111 Identities=20% Similarity=0.221 Sum_probs=88.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||+.+|+.| ...|.+|++||++..... . +...| .....++++++++||+|++|+|
T Consensus 4 ~~I~iiG~G~mG~~~a~~l-~~~G~~V~~~d~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNL-LKAGYLLNVFDLVQSAVD-G--------LVAAG-----ASAARSARDAVQGADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSSHHHHH-H--------HHHTT-----CEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HhCCCeEEEEcCCHHHHH-H--------HHHCC-----CeEcCCHHHHHhCCCeEEEECC
Confidence 6899999999999999998 578999999999876432 1 11122 2235689999999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 246 lt~~t~~li~~--~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
....+..++.. +.+..++++.++||++++.....+.+.+.+.+..+
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 76666766642 56778999999999999999888899998886543
No 73
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.12 E-value=1.5e-10 Score=118.19 Aligned_cols=147 Identities=17% Similarity=0.243 Sum_probs=101.6
Q ss_pred EcccCccccc-hhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEE
Q 016162 92 NMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (394)
Q Consensus 92 ~~g~G~d~id-~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGI 170 (394)
-+++|+..+. +.......|+|.|+.+..+.+..+...+.--+ +..+.+. ..+..+.||+++|
T Consensus 208 eTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yGt~~s-----------l~dgi~r------~tg~~L~GKtVvV 270 (488)
T 3ond_A 208 ETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHS-----------LPDGLMR------ATDVMIAGKVAVV 270 (488)
T ss_dssp CSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHHHHHH-----------HHHHHHH------HHCCCCTTCEEEE
T ss_pred cccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhccccHH-----------HHHHHHH------HcCCcccCCEEEE
Confidence 4567877653 22233577999999775544432322221111 1111110 1335799999999
Q ss_pred EecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhh
Q 016162 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (394)
Q Consensus 171 IGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t 250 (394)
+|+|.||+.+|++| +++|++|+++|+++....+... .+. ...++++++..+|+|+.+. .+
T Consensus 271 tGaGgIG~aiA~~L-aa~GA~Viv~D~~~~~a~~Aa~---------~g~------dv~~lee~~~~aDvVi~at----G~ 330 (488)
T 3ond_A 271 AGYGDVGKGCAAAL-KQAGARVIVTEIDPICALQATM---------EGL------QVLTLEDVVSEADIFVTTT----GN 330 (488)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHH---------TTC------EECCGGGTTTTCSEEEECS----SC
T ss_pred ECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHHHH---------hCC------ccCCHHHHHHhcCEEEeCC----CC
Confidence 99999999999997 7999999999998754322211 111 2357888999999999764 45
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 251 YHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 251 ~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
.++++.+.|+.||++++++|++++.
T Consensus 331 ~~vl~~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 331 KDIIMLDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp SCSBCHHHHTTSCTTEEEEESSSTT
T ss_pred hhhhhHHHHHhcCCCeEEEEcCCCC
Confidence 7789999999999999999999973
No 74
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.09 E-value=1.9e-10 Score=109.66 Aligned_cols=204 Identities=15% Similarity=0.122 Sum_probs=121.4
Q ss_pred CCCCceEEEEeCCCC----chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcC----CCcEEEecCCccccHHHHHHh
Q 016162 11 NPNGKYRVVSTKPMP----GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGD----KCDGVIGQLTEDWGETLFAAL 82 (394)
Q Consensus 11 ~~~~~~~vlv~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~----~~d~ii~~~~~~i~~~~l~~l 82 (394)
|+.++.--|+-+|+. +.-.-..+++.|.+..+.... .+++++.+.+.. +++++.+..+ ..++++..+
T Consensus 9 ~~~t~~~~liG~pi~hs~sp~~h~~~~~~~g~~~~y~~~~---~~~~~l~~~i~~l~~~~~~G~nvtiP--~k~~i~~~l 83 (275)
T 2hk9_A 9 NAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFE---INPEELKKAFEGFKALKVKGINVTVP--FKEEIIPLL 83 (275)
T ss_dssp CTTCEEEEEEESSCTTCSHHHHHHHHHHHHTCSEEEEEEE---CCGGGHHHHHHHHHHHTCCEEEECTT--STTTTGGGC
T ss_pred cCCceEEEEECCCcccccCHHHHHHHHHHcCCCcEEEEEE---CCHHHHHHHHHHHHhCCCCEEEECcc--CHHHHHHHH
Confidence 344443345656543 221224556667665544332 244555554421 4678777643 445666666
Q ss_pred cccCCcEEEEcccCccccchhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccc
Q 016162 83 SRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNL 162 (394)
Q Consensus 83 ~~l~~k~I~~~g~G~d~id~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~ 162 (394)
+.+ .-.+...-++|.++. +.|- ..|+|+... +++.++.| . |.+
T Consensus 84 d~l--~~~A~~~gavnti~~----~~g~----~~g~nTd~~-----G~~~~l~~----------~------------~~~ 126 (275)
T 2hk9_A 84 DYV--EDTAKEIGAVNTVKF----ENGK----AYGYNTDWI-----GFLKSLKS----------L------------IPE 126 (275)
T ss_dssp SEE--CHHHHHHTCCCEEEE----ETTE----EEEECCHHH-----HHHHHHHH----------H------------CTT
T ss_pred HHh--hHHHHHhCCcceEEe----eCCE----EEeecCCHH-----HHHHHHHH----------h------------CCC
Confidence 655 444445556666653 2342 234455332 34433322 1 135
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
+.|++++|||.|.+|+.+++.| ...|++|+++||+.+.. ++..+ ..+ .....+++++++++|+|++
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L-~~~g~~V~v~~r~~~~~-~~l~~-------~~g-----~~~~~~~~~~~~~aDiVi~ 192 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYAL-VKEGAKVFLWNRTKEKA-IKLAQ-------KFP-----LEVVNSPEEVIDKVQVIVN 192 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHH-HHHTCEEEEECSSHHHH-HHHTT-------TSC-----EEECSCGGGTGGGCSEEEE
T ss_pred cCCCEEEEECchHHHHHHHHHH-HHcCCEEEEEECCHHHH-HHHHH-------HcC-----CeeehhHHhhhcCCCEEEE
Confidence 7889999999999999999997 57788999999987542 11111 111 1223377888999999999
Q ss_pred cCCCChh--hhhcccHHHHhcCCCCcEEEEcCC
Q 016162 243 HPVLDKT--TYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 243 ~lPlt~~--t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|.... +...++ ++.++++.+++|++.
T Consensus 193 atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 193 TTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred eCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 9996542 223343 456899999999988
No 75
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.05 E-value=6.5e-10 Score=106.04 Aligned_cols=144 Identities=19% Similarity=0.149 Sum_probs=95.6
Q ss_pred CCeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
-++|||||+|.||+.+|+.|++ ++|.+|++||++...... . ...|... ....+++++++++|+|++|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~-~--------~~~g~~~---~~~~~~~~~~~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDI-A--------LERGIVD---EATADFKVFAALADVIILA 73 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHH-H--------HHTTSCS---EEESCTTTTGGGCSEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHH-H--------HHcCCcc---cccCCHHHhhcCCCEEEEc
Confidence 3689999999999999998843 347899999998754321 1 1112110 1235677888999999999
Q ss_pred CCCChhhhhcccHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEee---ccCC---CCCC-CCccccCCce
Q 016162 244 PVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD---VFED---EPYM-KPGLSEMKNA 315 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~-mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalD---V~~~---EP~~-~~~L~~~~nv 315 (394)
+|.. ....++ .+.... ++++.+++++++......+.+.+.+.+..+.. ++ ++.. .|.. ..+++..+++
T Consensus 74 vp~~-~~~~v~-~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~--v~~~P~~g~~~~g~~~a~~~l~~g~~~ 149 (290)
T 3b1f_A 74 VPIK-KTIDFI-KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQF--VGSHPMAGSHKSGAVAANVNLFENAYY 149 (290)
T ss_dssp SCHH-HHHHHH-HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEE--EEEEEC-----CCTTSCCTTTTTTSEE
T ss_pred CCHH-HHHHHH-HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEE--EEeCCcCCCCcchHHHhhHHHhCCCeE
Confidence 9943 335555 345567 89999999999887766678888776522222 22 1111 2221 2357777889
Q ss_pred EEcCCCCCC
Q 016162 316 IVVPHIASA 324 (394)
Q Consensus 316 ilTPHia~~ 324 (394)
+++||.++.
T Consensus 150 ~~~~~~~~~ 158 (290)
T 3b1f_A 150 IFSPSCLTK 158 (290)
T ss_dssp EEEECTTCC
T ss_pred EEecCCCCC
Confidence 999997654
No 76
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.03 E-value=4.5e-10 Score=112.40 Aligned_cols=232 Identities=17% Similarity=0.204 Sum_probs=127.2
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHHHHh---c-----CCCcEEEecCCccccHHHHHHhcccCCcEEEEcccCcc
Q 016162 29 WINLLIEQDCRVEICTQKK--TILSVEDIIALI---G-----DKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYN 98 (394)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~~el~~~~---~-----~~~d~ii~~~~~~i~~~~l~~l~~l~~k~I~~~g~G~d 98 (394)
..+.|.+.|++|.+..... ...+.++..+.= . .++|.|+.- ..+ +++-++.+.. |-.+++...-.-|
T Consensus 47 ~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkV-k~p-~~~e~~~l~~-g~~l~~~lh~~~~ 123 (405)
T 4dio_A 47 SVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKV-RRP-SAQEISGYRS-GAVVIAIMDPYGN 123 (405)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEE-ECC-CTTTGGGSCT-TCEEEEECCCTTC
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEe-CCC-ChhHHhhcCC-CcEEEEEeccccC
Confidence 5778888899987765532 234555554310 0 035665532 111 2233344543 2233443333223
Q ss_pred ccchhHHhhCCceEec---CCCCC-c------hhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccc-cccCCCe
Q 016162 99 NVDVNAANKYGIAVGN---TPGVL-T------ETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG-NLLKGQT 167 (394)
Q Consensus 99 ~id~~~a~~~gI~v~n---~p~~~-~------~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g-~~l~gkt 167 (394)
.=-++++.++||...- .|... + .+++|.+=.+. ...+.. .-++. .+....+ -.+.+.+
T Consensus 124 ~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~A------v~~aa~--~l~~~---~~~l~t~~g~v~~~k 192 (405)
T 4dio_A 124 EEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQA------VIDAAY--EYDRA---LPMMMTAAGTVPAAK 192 (405)
T ss_dssp HHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHH------HHHHHH--HCSSC---SSCEEETTEEECCCE
T ss_pred HHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHH------HHHHHH--HhHhh---hchhhccCCCcCCCE
Confidence 3334667788988854 33211 1 12233222111 111110 01111 1111111 2478999
Q ss_pred EEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhc-------CCCCcccc----------ccCCH
Q 016162 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN-------GEQPVTWK----------RASSM 230 (394)
Q Consensus 168 vGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~----------~~~~l 230 (394)
|+|||+|.||..+|+.+ +++|++|++||+++... +. .+.++...... +.....+. ...++
T Consensus 193 V~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l-~~-~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 193 IFVMGAGVAGLQAIATA-RRLGAVVSATDVRPAAK-EQ-VASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp EEEECCSHHHHHHHHHH-HHTTCEEEEECSSTTHH-HH-HHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHH-HHCCCEEEEEcCCHHHH-HH-HHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 99999999999999996 89999999999997642 21 11111100000 00000000 01367
Q ss_pred HHHhcccCEEEEcC--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccC
Q 016162 231 DEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVID 278 (394)
Q Consensus 231 ~ell~~aDiV~l~l--Plt~~t~~li~~~~l~~mk~gailIN~a--RG~~vd 278 (394)
++.+++||+|+.++ |.. .+..+++++.++.||||++|||+| +|+.++
T Consensus 270 ~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e 320 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIE 320 (405)
T ss_dssp HHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBT
T ss_pred HHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCcc
Confidence 89999999998874 533 467889999999999999999998 666544
No 77
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.98 E-value=5.3e-10 Score=109.99 Aligned_cols=132 Identities=14% Similarity=0.130 Sum_probs=87.1
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc----cCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE----ADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~----aDiV 240 (394)
-++|||||+|+||+++|+.| +..|.+|++||+++...... ...|. ....++++++++ ||+|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L-~~~G~~V~~~dr~~~~~~~a---------~~~G~-----~~~~~~~e~~~~a~~~aDlV 72 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDL-HAANHSVFGYNRSRSGAKSA---------VDEGF-----DVSADLEATLQRAAAEDALI 72 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHH-HHTTCCEEEECSCHHHHHHH---------HHTTC-----CEESCHHHHHHHHHHTTCEE
T ss_pred CCEEEEEeecHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH---------HHcCC-----eeeCCHHHHHHhcccCCCEE
Confidence 35899999999999999998 68899999999987643211 11222 224688888765 6999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC----------CCccc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM----------KPGLS 310 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~----------~~~L~ 310 (394)
++|+|. ..+..++ ++ +..++++++++|++.-+..-.+++.+.+. ...+....|.. ...|+
T Consensus 73 ilavP~-~~~~~vl-~~-l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~-------~~~~v~~HPmaG~e~sG~~aa~~~Lf 142 (341)
T 3ktd_A 73 VLAVPM-TAIDSLL-DA-VHTHAPNNGFTDVVSVKTAVYDAVKARNM-------QHRYVGSHPMAGTANSGWSASMDGLF 142 (341)
T ss_dssp EECSCH-HHHHHHH-HH-HHHHCTTCCEEECCSCSHHHHHHHHHTTC-------GGGEECEEECCSCC-CCGGGCCSSTT
T ss_pred EEeCCH-HHHHHHH-HH-HHccCCCCEEEEcCCCChHHHHHHHHhCC-------CCcEecCCccccccccchhhhhhHHh
Confidence 999994 4566666 23 34458999999998755322223322221 11222334432 13588
Q ss_pred cCCceEEcCCC
Q 016162 311 EMKNAIVVPHI 321 (394)
Q Consensus 311 ~~~nvilTPHi 321 (394)
...++++||+-
T Consensus 143 ~g~~~iltp~~ 153 (341)
T 3ktd_A 143 KRAVWVVTFDQ 153 (341)
T ss_dssp TTCEEEECCGG
T ss_pred cCCeEEEEeCC
Confidence 88889999974
No 78
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.97 E-value=1.1e-09 Score=104.71 Aligned_cols=109 Identities=18% Similarity=0.198 Sum_probs=85.2
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|+|||+|.||+.+|+.| ...|.+|++||++..... .. ...| .....+++++++.+|+|++|+|
T Consensus 6 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~-~~--------~~~g-----~~~~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNL-LKAGYSLVVSDRNPEAIA-DV--------IAAG-----AETASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHH-HH--------HHTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-HH--------HHCC-----CeecCCHHHHHhCCCEEEEECC
Confidence 4899999999999999998 577999999999875421 11 1112 1234688999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
....+..++. ++....+++|.++|++++|...+.+.|.+.+.+.
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 6666666663 3455778999999999999887788899988764
No 79
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.97 E-value=1.2e-09 Score=104.64 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=85.4
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|+|||+|.||+.+|+.| ...|.+|++||+++.... . +...| .....++++++.++|+|++|+|
T Consensus 5 ~~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINL-LKEGVTVYAFDLMEANVA-A--------VVAQG-----AQACENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp CEEEEECCCTTHHHHHHHH-HHTTCEEEEECSSHHHHH-H--------HHTTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHHH-H--------HHHCC-----CeecCCHHHHHhCCCEEEEECC
Confidence 5899999999999999998 577999999999875421 1 11112 2234688999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 246 lt~~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
....+..++. ++....++++.++|++++|...+.+.|.+.+.+.
T Consensus 70 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 70 NAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 7666777764 3556778999999999999877788888888764
No 80
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.97 E-value=3.1e-09 Score=109.08 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=90.2
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc---cC
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---AD 238 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aD 238 (394)
....++|||||+|.||+.+|+.| ...|.+|.+|||+++... ...+.+ +. .+.....+++++++. +|
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~L-a~~G~~V~v~~r~~~~~~-~l~~~~-------~~--~gi~~~~s~~e~v~~l~~aD 80 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNI-ESRGYTVSIFNRSREKTE-EVIAEN-------PG--KKLVPYYTVKEFVESLETPR 80 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHH-HTTTCCEEEECSSHHHHH-HHHHHS-------TT--SCEEECSSHHHHHHTBCSSC
T ss_pred ccCCCeEEEEccHHHHHHHHHHH-HhCCCeEEEEeCCHHHHH-HHHhhC-------CC--CCeEEeCCHHHHHhCCCCCC
Confidence 35567899999999999999998 577999999999876532 211111 00 112234689998887 99
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
+|++++|....+..++ ++....+++|.++||++.|...+...+.+.+.+..+.
T Consensus 81 vVil~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 81 RILLMVKAGAGTDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp EEEECSCSSSHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEEEECCCHHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 9999999777788877 4667889999999999999988888898888775443
No 81
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.96 E-value=1.5e-08 Score=98.80 Aligned_cols=156 Identities=14% Similarity=0.096 Sum_probs=98.1
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHH--HHHhhhhhhhhcCCCCc---------cccccCCHHHH
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQPV---------TWKRASSMDEV 233 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~l~el 233 (394)
-++|||||.|.||..+|..+ ...|.+|++||+++...... ........+...|...- ......++++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~l-a~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLF-ASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHH-HHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CceEEEEeeCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 46899999999999999998 46699999999998653211 11111111111221110 11234689999
Q ss_pred hcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCC
Q 016162 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK 313 (394)
Q Consensus 234 l~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~ 313 (394)
+++||+|+.|+|.+.+.+.-+-++..+.++++++|++.+.+ +....+.+.+.. .....+...|. |. ...+
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~--P~-----~~~~ 154 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PP-----YYIP 154 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--ST-----TTCC
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC--ch-----hhcc
Confidence 99999999999977666544446677789999999876665 444566665543 23456666554 32 1234
Q ss_pred ceEEcCCCCCCcHHHHHHH
Q 016162 314 NAIVVPHIASASKWTREGM 332 (394)
Q Consensus 314 nvilTPHia~~t~~~~~~~ 332 (394)
-+.++|+- ..+.++.+.+
T Consensus 155 lveiv~g~-~t~~e~~~~~ 172 (319)
T 2dpo_A 155 LVELVPHP-ETSPATVDRT 172 (319)
T ss_dssp EEEEEECT-TCCHHHHHHH
T ss_pred eEEEeCCC-CCCHHHHHHH
Confidence 56777763 2345554443
No 82
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.93 E-value=6.7e-09 Score=98.30 Aligned_cols=144 Identities=13% Similarity=0.059 Sum_probs=91.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|+|||+|.||+.+|+.| ...|.+|++||++...... . ...+... ....+++++ .++|+|++|+|
T Consensus 1 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~~-~--------~~~g~~~---~~~~~~~~~-~~~D~vi~av~ 66 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDL-RRRGHYLIGVSRQQSTCEK-A--------VERQLVD---EAGQDLSLL-QTAKIIFLCTP 66 (279)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH-H--------HHTTSCS---EEESCGGGG-TTCSEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHH-HHCCCEEEEEECCHHHHHH-H--------HhCCCCc---cccCCHHHh-CCCCEEEEECC
Confidence 3799999999999999998 5778999999998754321 1 1112111 123577788 99999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCC---CCC-CCccccCCceEEcCCC
Q 016162 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE---PYM-KPGLSEMKNAIVVPHI 321 (394)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~E---P~~-~~~L~~~~nvilTPHi 321 (394)
. ..+..++ .+....+++++++|++++......+.+.+.+. ++.+. .-++..+ |.. ...++..+.++++|+-
T Consensus 67 ~-~~~~~~~-~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~ 141 (279)
T 2f1k_A 67 I-QLILPTL-EKLIPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTE 141 (279)
T ss_dssp H-HHHHHHH-HHHGGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECT
T ss_pred H-HHHHHHH-HHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCC
Confidence 3 3455555 45556789999999997766655555555433 22221 1222111 211 1245666678999974
Q ss_pred CCCcHHHH
Q 016162 322 ASASKWTR 329 (394)
Q Consensus 322 a~~t~~~~ 329 (394)
++ +.+..
T Consensus 142 ~~-~~~~~ 148 (279)
T 2f1k_A 142 YT-DPEQL 148 (279)
T ss_dssp TC-CHHHH
T ss_pred CC-CHHHH
Confidence 33 44433
No 83
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.92 E-value=1.4e-09 Score=103.81 Aligned_cols=108 Identities=22% Similarity=0.279 Sum_probs=81.7
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||+.+|+.| ...|.+|++|||+..... . +...| .....+++++++.+|+|++|+|
T Consensus 1 m~i~iiG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNL-MKHGYPLIIYDVFPDACK-E--------FQDAG-----EQVVSSPADVAEKADRIITMLP 65 (296)
T ss_dssp CCEEEECCSTTHHHHHHHH-HHTTCCEEEECSSTHHHH-H--------HHTTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CeEEEEeccHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-H--------HHHcC-----CeecCCHHHHHhcCCEEEEeCC
Confidence 3799999999999999998 577999999999875421 1 11112 2234688999999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 246 lt~~t~~li~~--~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
....+..++.. ..++.++++.++|+++...+.+.+.+.+.+.+
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 76677766643 24567899999999888777666777777764
No 84
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.91 E-value=1.3e-08 Score=97.99 Aligned_cols=146 Identities=18% Similarity=0.157 Sum_probs=93.5
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
-+.|+|||||+|.||+.+|+.+ . .|.+|++||++++..... .+.+. +. ...+.....++++ +++||+|+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~l-a-aG~~V~v~d~~~~~~~~~-~~~l~---~~---~~~~i~~~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAI-A-SKHEVVLQDVSEKALEAA-REQIP---EE---LLSKIEFTTTLEK-VKDCDIVME 79 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHHHHH-HHHSC---GG---GGGGEEEESSCTT-GGGCSEEEE
T ss_pred cCCCeEEEEeeCHHHHHHHHHH-H-cCCEEEEEECCHHHHHHH-HHHHH---HH---HhCCeEEeCCHHH-HcCCCEEEE
Confidence 4678999999999999999998 5 799999999998653221 11100 00 0001222356766 899999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEE-EcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCC
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILV-NCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHI 321 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailI-N~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHi 321 (394)
|+|.+.+.+..+-.+ +..+ ++++++ |+|.-.+ ..+.+++. ...+..++..|. |. ..++-+.++|+-
T Consensus 80 avpe~~~vk~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~--Pv-----~~~~lveiv~g~ 146 (293)
T 1zej_A 80 AVFEDLNTKVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN--PP-----HVMPLVEIVISR 146 (293)
T ss_dssp CCCSCHHHHHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS--ST-----TTCCEEEEEECT
T ss_pred cCcCCHHHHHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC--cc-----ccCCEEEEECCC
Confidence 999888766555333 6666 999884 7877443 45554443 234567777776 43 234667777752
Q ss_pred CCCcHHHHHHH
Q 016162 322 ASASKWTREGM 332 (394)
Q Consensus 322 a~~t~~~~~~~ 332 (394)
..+.++.+++
T Consensus 147 -~t~~~~~~~~ 156 (293)
T 1zej_A 147 -FTDSKTVAFV 156 (293)
T ss_dssp -TCCHHHHHHH
T ss_pred -CCCHHHHHHH
Confidence 2445555543
No 85
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.90 E-value=7.2e-09 Score=106.81 Aligned_cols=117 Identities=15% Similarity=0.212 Sum_probs=89.3
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc---cCEEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVIS 241 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiV~ 241 (394)
..+|||||+|.||+.+|+.| ...|.+|.+|||++....+ ..+. ... +.+.....+++++++. +|+|+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~L-a~~G~~V~v~dr~~~~~~~-l~~~------~~~--~~gi~~~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNA-ADHGFTVCAYNRTQSKVDH-FLAN------EAK--GKSIIGATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSSHHHHH-HHHT------TTT--TSSEECCSSHHHHHHTSCSSCEEE
T ss_pred CCCEEEEeeHHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-HHcc------ccc--CCCeEEeCCHHHHHhcCCCCCEEE
Confidence 35899999999999999998 4679999999998865322 1110 000 0112334689998887 99999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
+++|....+..++ ++....+++|.++|+++.+...+...+.+.+.+..+.
T Consensus 80 l~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 80 LLVKAGAPVDALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp ECCCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEcCChHHHHHHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 9999777778777 5667889999999999999988888899888764343
No 86
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.90 E-value=3.4e-08 Score=100.62 Aligned_cols=154 Identities=16% Similarity=0.129 Sum_probs=96.9
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--------cccccCCHHHHhccc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--------TWKRASSMDEVLREA 237 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ell~~a 237 (394)
++|+|||.|.||..+|..++ ..|.+|++||++.+.......+.+ +.+...|.... ......+++ .+++|
T Consensus 55 ~kVaVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~a~~~i~~~l-~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~a 131 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFG-LAGIETFLVVRNEQRCKQELEVMY-AREKSFKRLNDKRIEKINANLKITSDFH-KLSNC 131 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHH-HHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCeEEEEECcHHHHHHHHHHHH-HHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccC
Confidence 68999999999999999984 679999999999873221111111 01112222110 111235675 68999
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEE
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIV 317 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvil 317 (394)
|+|+.++|.+.+.+.-+-++..+.++++++|++.+.+ +....|.+.+.. .-...++..|. |.. .++-+.+
T Consensus 132 DlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn--Pv~-----~m~LvEI 201 (460)
T 3k6j_A 132 DLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN--PAN-----VIRLVEI 201 (460)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS--STT-----TCCEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC--hhHHHHHHhccC-CcceEEEEecc--hhh-----hCCEEEE
Confidence 9999999987766554446677889999999654443 344566655543 34677888776 432 2344667
Q ss_pred cCCCCCCcHHHHHHHH
Q 016162 318 VPHIASASKWTREGMA 333 (394)
Q Consensus 318 TPHia~~t~~~~~~~~ 333 (394)
+|+- .++.++.+.+.
T Consensus 202 v~g~-~Ts~e~~~~~~ 216 (460)
T 3k6j_A 202 IYGS-HTSSQAIATAF 216 (460)
T ss_dssp ECCS-SCCHHHHHHHH
T ss_pred EeCC-CCCHHHHHHHH
Confidence 7752 34455555443
No 87
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.89 E-value=1.3e-09 Score=103.83 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=83.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||+.+|+.| ...|.+|++|| +.... +. +...| .....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~-~~~~~-~~--------~~~~g-----~~~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINL-ARAGHQLHVTT-IGPVA-DE--------LLSLG-----AVNVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp CEEEECCCSTTHHHHHHHH-HHTTCEEEECC-SSCCC-HH--------HHTTT-----CBCCSSHHHHHHTCSEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHH-HhCCCEEEEEc-CHHHH-HH--------HHHcC-----CcccCCHHHHHhcCCEEEEECC
Confidence 4899999999999999998 57799999999 65432 11 11112 1234688999999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 246 lt~~t~~li~~--~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
....+..++.. +....+++|.++|++++|...+.+.|.+.+.+.
T Consensus 68 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 68 DTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp SHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 66556666642 455678999999999999888888999988863
No 88
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.87 E-value=3.1e-09 Score=102.59 Aligned_cols=109 Identities=15% Similarity=0.147 Sum_probs=83.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||+.+|+.| ...|.+|++||++..... .. ...| .....+++++++++|+|++|+|
T Consensus 31 ~~I~iIG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~~-~~--------~~~g-----~~~~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNL-LKMGHTVTVWNRTAEKCD-LF--------IQEG-----ARLGRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEECSSGGGGH-HH--------HHTT-----CEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-HH--------HHcC-----CEEcCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999998 577899999999875421 11 1112 1224578899999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 246 lt~~t~~li~~--~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
....+..++.. ..+..++++.++|+++++.....+.|.+.+...
T Consensus 96 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 141 (316)
T 2uyy_A 96 DPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSR 141 (316)
T ss_dssp SHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 66666665543 245678999999999998877778888888653
No 89
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.86 E-value=1.1e-08 Score=104.81 Aligned_cols=116 Identities=16% Similarity=0.168 Sum_probs=88.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc---cCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiV~l 242 (394)
++|||||+|.||+.+|+.| ...|.+|.+|||+.+.. +...+.+ +. .+.....+++++++. +|+|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L-~~~G~~V~v~dr~~~~~-~~l~~~~-------~~--~gi~~~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNV-ESRGYTVAIYNRTTSKT-EEVFKEH-------QD--KNLVFTKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp BSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSHHHH-HHHHHHT-------TT--SCEEECSSHHHHHHTBCSSCEEEE
T ss_pred CcEEEEeeHHHHHHHHHHH-HhCCCEEEEEcCCHHHH-HHHHHhC-------cC--CCeEEeCCHHHHHhhccCCCEEEE
Confidence 5899999999999999998 56789999999987643 2221111 00 112234689998876 999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcce
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~g 293 (394)
|+|....+..++ ++....+++|.++|+++.|...+.+.+.+.+.+..+..
T Consensus 75 avp~~~~v~~vl-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~ 124 (474)
T 2iz1_A 75 MVQAGAATDATI-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINF 124 (474)
T ss_dssp CCCTTHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEE
T ss_pred EccCchHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeE
Confidence 999776777777 45667899999999999998888888988887644443
No 90
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.86 E-value=5.8e-09 Score=98.93 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=81.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|+|||+|.||+.+|+.| .. |.+|++||++...... .. ..|. .... +++++..+|+|++|+|
T Consensus 2 ~~i~iiG~G~~G~~~a~~l-~~-g~~V~~~~~~~~~~~~-~~--------~~g~-----~~~~-~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHL-AR-RFPTLVWNRTFEKALR-HQ--------EEFG-----SEAV-PLERVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHH-HT-TSCEEEECSSTHHHHH-HH--------HHHC-----CEEC-CGGGGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-hC-CCeEEEEeCCHHHHHH-HH--------HCCC-----cccC-HHHHHhCCCEEEEeCC
Confidence 4799999999999999998 56 9999999998754321 11 1111 1122 6677889999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
....+..++ ++....++++.++|+++++...+.+.|.+.+.+.
T Consensus 65 ~~~~~~~v~-~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 65 TTREVYEVA-EALYPYLREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp SHHHHHHHH-HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred ChHHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 655566655 5556778999999999999888888999988864
No 91
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.83 E-value=7.8e-09 Score=102.42 Aligned_cols=108 Identities=17% Similarity=0.245 Sum_probs=81.9
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-ccCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (394)
+|.||||+|+|+|+||+.+|+.| ..+|++|+++|++... ..++.+.| +. ...+.++++. +||++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L-~~~GakVvv~D~~~~~-l~~~a~~~-------ga------~~v~~~~ll~~~~DIv 234 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKL-NTEGAKLVVTDVNKAA-VSAAVAEE-------GA------DAVAPNAIYGVTCDIF 234 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH-HHHHHHHH-------CC------EECCGGGTTTCCCSEE
T ss_pred CCCcCEEEEECchHHHHHHHHHH-HHCCCEEEEEcCCHHH-HHHHHHHc-------CC------EEEChHHHhccCCcEe
Confidence 69999999999999999999997 7999999999998753 23232322 11 1235566665 89999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
+.|. +.++|+.+.++.|+ ..++++.+++.+.+++ ..+.|+++.+
T Consensus 235 ip~a-----~~~~I~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 235 APCA-----LGAVLNDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp EECS-----CSCCBSTTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred eccc-----hHHHhCHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 9874 56788888888884 6789999999988866 4566666554
No 92
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.83 E-value=1.3e-08 Score=104.63 Aligned_cols=118 Identities=15% Similarity=0.220 Sum_probs=87.8
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc---ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~aDiV~l 242 (394)
++|||||+|.||+.+|+.| ...|.+|.+|||+..... ...+. +..+ .+.....++++++. .+|+|++
T Consensus 3 m~IgvIG~G~mG~~lA~~L-a~~G~~V~v~dr~~~~~~-~l~~~-----~~~g---~gi~~~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNM-NDHGFVVCAFNRTVSKVD-DFLAN-----EAKG---TKVLGAHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp BSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSTHHHH-HHHHT-----TTTT---SSCEECSSHHHHHHHBCSSCEEEE
T ss_pred CeEEEEChHHHHHHHHHHH-HHCCCeEEEEeCCHHHHH-HHHhc-----cccC---CCeEEeCCHHHHHhhccCCCEEEE
Confidence 4799999999999999998 577899999999876532 21110 0000 11223468888874 8999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
|+|....+..++ ++....+++|.++|+++.|...+...+.+.+.+..+...
T Consensus 73 aVp~~~~v~~vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v 123 (482)
T 2pgd_A 73 LVKAGQAVDNFI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp CSCTTHHHHHHH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred eCCChHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe
Confidence 999766777777 456678999999999999988888888888876444433
No 93
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.83 E-value=1.8e-08 Score=103.35 Aligned_cols=125 Identities=17% Similarity=0.205 Sum_probs=90.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc---cCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiV~l 242 (394)
++|||||+|.||+.+|+.| ...|.+|.+|||+.+.. +...+.++.. . .+.......+++++++. +|+|++
T Consensus 2 MkIgVIG~G~mG~~lA~~L-a~~G~~V~v~dr~~~~~-~~l~~~~g~~--~---~~~~i~~~~~~~e~v~~l~~aDvVil 74 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNI-AEKGFKVAVFNRTYSKS-EEFMKANASA--P---FAGNLKAFETMEAFAASLKKPRKALI 74 (478)
T ss_dssp BSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSHHHH-HHHHHHTTTS--T---TGGGEEECSCHHHHHHHBCSSCEEEE
T ss_pred CEEEEEChHHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHHhcCCC--C---CCCCeEEECCHHHHHhcccCCCEEEE
Confidence 3799999999999999998 57799999999987543 2221111100 0 00112335689898874 999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeec
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDV 298 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV 298 (394)
|+|....+..++ ++....+++|.++|+++.|...+.+.+.+.+.+..+.....-|
T Consensus 75 aVp~~~~v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv 129 (478)
T 1pgj_A 75 LVQAGAATDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGI 129 (478)
T ss_dssp CCCCSHHHHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred ecCChHHHHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeec
Confidence 999766777777 4566778999999999999888888899888875444333333
No 94
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.81 E-value=1.8e-08 Score=103.06 Aligned_cols=147 Identities=14% Similarity=0.197 Sum_probs=92.6
Q ss_pred CeEEEEecChHHHHHHHHHHhc-CCcEEEEEcCchhhHHHHHHHhh--------hhhhhhcCCCCccccccCCHHHHhcc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~-~G~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (394)
++|+|||+|.||..+|..|++. .|.+|++||++...... ..+.. .+.+... . ..+.....++++.++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~-l~~g~~~i~e~~l~~~~~~~-~-~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINA-WNSPTLPIYEPGLKEVVESC-R-GKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHH-HTSSSCSSCCTTHHHHHHHH-B-TTTEEEESCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHH-HhCCCCCcCCCCHHHHHHHh-h-cCCEEEECCHHHHHhc
Confidence 5899999999999999998532 28999999998764321 10000 0000000 0 0012234688889999
Q ss_pred cCEEEEcCCCChhhhh-----------ccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEee---ccC
Q 016162 237 ADVISLHPVLDKTTYH-----------LIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD---VFE 300 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~-----------li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalD---V~~ 300 (394)
||+|++|+|......+ +.. +...+.+++|+++|+.|+..+-..+.+.+.+++.... .+| ++.
T Consensus 83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~ 160 (467)
T 2q3e_A 83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSN 160 (467)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEEC
T ss_pred CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeC
Confidence 9999999984433222 111 3355678999999999998887788898888875422 233 345
Q ss_pred CCCCCCC----ccccCCceEE
Q 016162 301 DEPYMKP----GLSEMKNAIV 317 (394)
Q Consensus 301 ~EP~~~~----~L~~~~nvil 317 (394)
.|+.... .+...+++++
T Consensus 161 Pe~~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 161 PEFLAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCCCCTTSHHHHHHSCSCEEE
T ss_pred HHHhhcccchhhccCCCEEEE
Confidence 5554321 2455566653
No 95
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.77 E-value=1.2e-08 Score=95.68 Aligned_cols=102 Identities=13% Similarity=0.102 Sum_probs=75.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcC--chhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
++|||||+|.||+.+|+.| ...|.+|++||+ .... .+.. ...|. . .++++++.++|+|++|
T Consensus 1 M~I~iIG~G~mG~~la~~l-~~~g~~V~~~~~~~~~~~-~~~~--------~~~g~-----~--~~~~~~~~~aDvvi~~ 63 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRL-RSRGVEVVTSLEGRSPST-IERA--------RTVGV-----T--ETSEEDVYSCPVVISA 63 (264)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCEEEECCTTCCHHH-HHHH--------HHHTC-----E--ECCHHHHHTSSEEEEC
T ss_pred CeEEEEechHHHHHHHHHH-HHCCCeEEEeCCccCHHH-HHHH--------HHCCC-----c--CCHHHHHhcCCEEEEE
Confidence 3799999999999999998 567899999988 3322 1111 11121 1 4677889999999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
+|.......+ .+....+++ ++||++++.+.+.+.|.+.+.+
T Consensus 64 v~~~~~~~~~--~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 64 VTPGVALGAA--RRAGRHVRG--IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp SCGGGHHHHH--HHHHTTCCS--EEEECSCCCHHHHHHHHHHCSS
T ss_pred CCCHHHHHHH--HHHHHhcCc--EEEEccCCCHHHHHHHHHHHhh
Confidence 9965555543 456667776 9999998887777888888765
No 96
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.77 E-value=4.6e-09 Score=106.76 Aligned_cols=124 Identities=20% Similarity=0.228 Sum_probs=81.5
Q ss_pred cccCC-CeEEEEecChHHHHHHHHHHhcC------CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHH
Q 016162 161 NLLKG-QTVGVIGAGRIGSAYARMMVEGF------KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (394)
Q Consensus 161 ~~l~g-ktvGIIGlG~IG~~vA~~la~~~------G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el 233 (394)
..|+| +||||||+|+||+++|+.| +.. |++|++.++......+. ....|.... .....+++|+
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nL-r~s~~~~g~G~~ViVg~r~~sks~e~--------A~e~G~~v~-d~ta~s~aEA 118 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNL-RDSLAEAKSDIVVKIGLRKGSKSFDE--------ARAAGFTEE-SGTLGDIWET 118 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHH-HHHHHHTTCCCEEEEEECTTCSCHHH--------HHHTTCCTT-TTCEEEHHHH
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHH-HhcccccCCCCEEEEEeCCchhhHHH--------HHHCCCEEe-cCCCCCHHHH
Confidence 57999 9999999999999999998 555 99988665543221111 111222110 0012478999
Q ss_pred hcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc-CCcceEEeeccCCCC
Q 016162 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ-NPMFRVGLDVFEDEP 303 (394)
Q Consensus 234 l~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~-g~l~gaalDV~~~EP 303 (394)
+++||+|++++|.... ..++. +.+..||+|++ |-.+.|-. +..+++ +...+..+||+-.-|
T Consensus 119 a~~ADVVILaVP~~~~-~eVl~-eI~p~LK~GaI-Ls~AaGf~------I~~le~~~i~~p~dv~VVrVmP 180 (525)
T 3fr7_A 119 VSGSDLVLLLISDAAQ-ADNYE-KIFSHMKPNSI-LGLSHGFL------LGHLQSAGLDFPKNISVIAVCP 180 (525)
T ss_dssp HHHCSEEEECSCHHHH-HHHHH-HHHHHSCTTCE-EEESSSHH------HHHHHHTTCCCCTTSEEEEEEE
T ss_pred HhcCCEEEECCChHHH-HHHHH-HHHHhcCCCCe-EEEeCCCC------HHHHhhhcccCCCCCcEEEEec
Confidence 9999999999996544 34665 68899999998 56677743 334443 222233456665555
No 97
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.76 E-value=2.5e-07 Score=91.45 Aligned_cols=241 Identities=17% Similarity=0.205 Sum_probs=135.2
Q ss_pred eeEEEeCCCCc--eEEEEeCCCCchHHHHHHHhCCCeEEEecCCC--CCCCHHHHHH-----------HhcCCCcEEEec
Q 016162 5 VSIEVWNPNGK--YRVVSTKPMPGTRWINLLIEQDCRVEICTQKK--TILSVEDIIA-----------LIGDKCDGVIGQ 69 (394)
Q Consensus 5 ~~~~~~~~~~~--~~vlv~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~el~~-----------~~~~~~d~ii~~ 69 (394)
|+|-|+++.+. .|| .+.| +..+.|.+.|++|.+..... ...+.++..+ .+ ++|.|+..
T Consensus 1 m~igv~~e~~~~E~Rv----~~~P-~~v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~--~ad~i~~v 73 (361)
T 1pjc_A 1 MEIGVPKEIKNQEFRV----GLSP-SSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAW--SREMVVKV 73 (361)
T ss_dssp CEEEECCCCSTTCCCC----SCCH-HHHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHH--TSSEEECS
T ss_pred CEEEEEccCCCCCCee----CcCH-HHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHh--cCCeEEEE
Confidence 45556655543 233 3344 35678878898887644332 2344444432 11 37876643
Q ss_pred CCccccHHHHHHhcccCCcEEEEcccCccccchhHHhhCCceEec---CCCCC-----chhhHHHHH--HHHHHHHhchH
Q 016162 70 LTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGN---TPGVL-----TETTAELAA--SLSLAAARRIV 139 (394)
Q Consensus 70 ~~~~i~~~~l~~l~~l~~k~I~~~g~G~d~id~~~a~~~gI~v~n---~p~~~-----~~~vAE~~l--~~~L~~~R~~~ 139 (394)
..+...+. . +-+.|...+......++.-.++.+.+.|+...| .|.-. -.++++.+- +.++++.. +.
T Consensus 74 -ksP~~~~~-~-~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~n-t~ 149 (361)
T 1pjc_A 74 -KEPLPAEY-D-LMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARF-LE 149 (361)
T ss_dssp -SCCCGGGG-G-GCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHH-TS
T ss_pred -CCCCHHHH-H-hhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHHH-Hh
Confidence 33332222 1 112232345444445554456677788888775 34321 133444333 44444322 21
Q ss_pred HHHHHHHcCccCCCC-CCcccccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcC
Q 016162 140 EADEFMRAGLYDGWL-PNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG 218 (394)
Q Consensus 140 ~~~~~~~~g~~~~w~-~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~ 218 (394)
.. ..|+ +.. .. . ..+.+++++|+|.|.+|+.+++.+ +.+|++|+++|++..+. +...+.++.
T Consensus 150 ~~----~~g~--G~~l~~--l-~~l~~~~VlViGaGgvG~~aa~~a-~~~Ga~V~v~dr~~~r~-~~~~~~~~~------ 212 (361)
T 1pjc_A 150 RQ----QGGR--GVLLGG--V-PGVKPGKVVILGGGVVGTEAAKMA-VGLGAQVQIFDINVERL-SYLETLFGS------ 212 (361)
T ss_dssp GG----GTSC--CCCTTC--B-TTBCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHHGG------
T ss_pred hc----cCCC--ceeccC--C-CCCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHHhhCc------
Confidence 10 1121 111 11 1 247889999999999999999996 79999999999987542 211111110
Q ss_pred CCCccccccCCHHHHhcccCEEEEcCCCCh-hhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 219 EQPVTWKRASSMDEVLREADVISLHPVLDK-TTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 219 ~~~~~~~~~~~l~ell~~aDiV~l~lPlt~-~t~~li~~~~l~~mk~gailIN~aR 273 (394)
..........++.+.+..+|+|+.+++... .+..++.++.++.|++|++++|++-
T Consensus 213 ~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 213 RVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp GSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred eeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 000000011246677889999999987432 2345668889999999999999974
No 98
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.24 E-value=8.3e-10 Score=100.56 Aligned_cols=94 Identities=19% Similarity=0.208 Sum_probs=71.7
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
+.+++|||||+|+||+.+|+.| ...|++|++|||+.. . +.+ ...+ ... .+++++++++|+|++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~-~-~~~--------~~~g-----~~~-~~~~~~~~~aDvVil 79 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKM-LQCGYSVVFGSRNPQ-V-SSL--------LPRG-----AEV-LCYSEAASRSDVIVL 79 (201)
Confidence 6788999999999999999998 688999999998764 1 111 1111 112 367788999999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCccc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~v 277 (394)
++|.. .+..++ .+..+++++++||+++|-..
T Consensus 80 av~~~-~~~~v~---~l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 80 AVHRE-HYDFLA---ELADSLKGRVLIDVSNNQKM 110 (201)
Confidence 99964 566665 24557789999999999864
No 99
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.73 E-value=3e-07 Score=88.18 Aligned_cols=155 Identities=15% Similarity=0.127 Sum_probs=90.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHH--HHHhhhhhhhhcCCCCc-------------cccccCCH
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQPV-------------TWKRASSM 230 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~-------------~~~~~~~l 230 (394)
++|+|||.|.||..+|..++ ..|.+|++||++....... ......+.+...|.... ......++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la-~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 94 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA-ATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDA 94 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCH
Confidence 68999999999999999984 6699999999987643211 00000000111121100 11224688
Q ss_pred HHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccc
Q 016162 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLS 310 (394)
Q Consensus 231 ~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~ 310 (394)
++.++.||+|++++|.+.+...-+-++....++++++++..+.|- ....+.+.+... -...+.+.+. |. .
T Consensus 95 ~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~-~~~~g~h~~~--P~-----~ 164 (302)
T 1f0y_A 95 ASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQ-DRFAGLHFFN--PV-----P 164 (302)
T ss_dssp HHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCG-GGEEEEEECS--ST-----T
T ss_pred HHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCc-ccEEEEecCC--Cc-----c
Confidence 888999999999999765544333345556688999998655443 344555544321 2345555553 32 1
Q ss_pred cCCceEEcCCCCCCcHHHHHHH
Q 016162 311 EMKNAIVVPHIASASKWTREGM 332 (394)
Q Consensus 311 ~~~nvilTPHia~~t~~~~~~~ 332 (394)
..+.+.+.++- ..+.+..+.+
T Consensus 165 ~~~~~~i~~g~-~~~~e~~~~~ 185 (302)
T 1f0y_A 165 VMKLVEVIKTP-MTSQKTFESL 185 (302)
T ss_dssp TCCEEEEECCT-TCCHHHHHHH
T ss_pred cCceEEEeCCC-CCCHHHHHHH
Confidence 23455666643 2345544443
No 100
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.73 E-value=1.9e-08 Score=94.64 Aligned_cols=102 Identities=13% Similarity=0.183 Sum_probs=74.5
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcE-EEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
+++.+++|||||+|.||+.+|+.+ ...|.+ |.+||++.... +...+.+ + .....+++++++++|+
T Consensus 6 ~~~~~m~i~iiG~G~mG~~~a~~l-~~~g~~~v~~~~~~~~~~-~~~~~~~-------g-----~~~~~~~~~~~~~~Dv 71 (266)
T 3d1l_A 6 RSIEDTPIVLIGAGNLATNLAKAL-YRKGFRIVQVYSRTEESA-RELAQKV-------E-----AEYTTDLAEVNPYAKL 71 (266)
T ss_dssp -CGGGCCEEEECCSHHHHHHHHHH-HHHTCCEEEEECSSHHHH-HHHHHHT-------T-----CEEESCGGGSCSCCSE
T ss_pred cCCCCCeEEEEcCCHHHHHHHHHH-HHCCCeEEEEEeCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCE
Confidence 456678999999999999999998 466888 89999987543 2211111 1 1224578888899999
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccC
Q 016162 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 278 (394)
|++|+|.. ....++ ++....+++++++|++++|...+
T Consensus 72 vi~av~~~-~~~~v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 72 YIVSLKDS-AFAELL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp EEECCCHH-HHHHHH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred EEEecCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCchH
Confidence 99999944 334454 44556788999999999987754
No 101
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.73 E-value=4.9e-08 Score=83.41 Aligned_cols=93 Identities=13% Similarity=0.250 Sum_probs=69.9
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
|++++|||.|.||+.+++.| ...|++|+++||+.... +.+.+.+ + .......++++.+.++|+|+.++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l-~~~g~~v~v~~r~~~~~-~~~a~~~-------~---~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYF-SYPQYKVTVAGRNIDHV-RAFAEKY-------E---YEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGC-CTTTCEEEEEESCHHHH-HHHHHHH-------T---CEEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEcCCHHHH-HHHHHHh-------C---CceEeecCHHHHhcCCCEEEEeC
Confidence 88999999999999999997 67899999999987653 2222222 1 11223468899999999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
|.. ..++.. ..+++|.+++|++...
T Consensus 89 ~~~---~~~~~~---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 89 SSK---TPIVEE---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp CCS---SCSBCG---GGCCTTCEEEECCSSC
T ss_pred CCC---CcEeeH---HHcCCCCEEEEccCCc
Confidence 954 344544 4568899999998753
No 102
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.62 E-value=1.5e-07 Score=95.25 Aligned_cols=124 Identities=16% Similarity=0.237 Sum_probs=82.7
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhh--------hhhhhhcCCCCccccccCCH
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSM 230 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l 230 (394)
++++..-++|+|||+|.||..+|..|+ . |.+|++||+++.... ...+.. .+.+.. + ..+.....++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La-~-G~~V~~~D~~~~~v~-~l~~g~~~i~e~~l~~ll~~-~--~~~l~~ttd~ 103 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIA-Q-NHEVVALDIVQAKVD-MLNQKISPIVDKEIQEYLAE-K--PLNFRATTDK 103 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHHH-HHHTTCCSSCCHHHHHHHHH-S--CCCEEEESCH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHH-c-CCeEEEEecCHHHhh-HHhccCCccccccHHHHHhh-c--cCCeEEEcCH
Confidence 556777789999999999999999985 5 999999999876422 111100 000000 0 0112234688
Q ss_pred HHHhcccCEEEEcCCCChh-------hhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 231 DEVLREADVISLHPVLDKT-------TYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 231 ~ell~~aDiV~l~lPlt~~-------t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
++.++.||+|++|+|...+ +..+.. +...+ +++|+++|+.|+-.+-..+.+.+.+.+.
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 9999999999999995421 112221 34556 8999999999998888888898888764
No 103
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.60 E-value=1.4e-06 Score=83.04 Aligned_cols=171 Identities=19% Similarity=0.210 Sum_probs=109.8
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHH-HHHHhcccCCcEEEEcccCccccch
Q 016162 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (394)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~-~l~~l~~l~~k~I~~~g~G~d~id~ 102 (394)
+..++.|.+.+....++ ..+++|+.+.+. ++.++|++..+ ..+++. ++++..-. |=+ -|+--+.+
T Consensus 58 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~ 130 (286)
T 4a5o_A 58 KDCEEVGFLSQAYDLPA-ETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPD--KDV----DGFHPYNI 130 (286)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGG--GCT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhh
Confidence 34456788877666554 357888887652 25789999865 445553 44443221 211 01111111
Q ss_pred hHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-HHHHHH
Q 016162 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (394)
Q Consensus 103 ~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~-IG~~vA 181 (394)
-... .+.++ ....++.-++-++ + ..+.+++||++.|||.|. +|+.+|
T Consensus 131 g~l~------~g~~~-~~PcTp~gv~~lL----~---------------------~~~i~l~Gk~vvVvGrs~iVG~plA 178 (286)
T 4a5o_A 131 GRLA------QRMPL-LRPCTPKGIMTLL----A---------------------STGADLYGMDAVVVGASNIVGRPMA 178 (286)
T ss_dssp HHHH------TTCCS-SCCHHHHHHHHHH----H---------------------HTTCCCTTCEEEEECTTSTTHHHHH
T ss_pred HHHh------cCCCC-CCCCCHHHHHHHH----H---------------------HhCCCCCCCEEEEECCCchhHHHHH
Confidence 1111 11233 3444555544322 2 123579999999999987 799999
Q ss_pred HHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhc
Q 016162 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (394)
Q Consensus 182 ~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~ 261 (394)
..| .+.|++|++.+++ ..++++.+++||+|+.+++. .++|..+.+
T Consensus 179 ~lL-~~~gAtVtv~hs~----------------------------T~~L~~~~~~ADIVI~Avg~----p~~I~~~~v-- 223 (286)
T 4a5o_A 179 LEL-LLGGCTVTVTHRF----------------------------TRDLADHVSRADLVVVAAGK----PGLVKGEWI-- 223 (286)
T ss_dssp HHH-HHTTCEEEEECTT----------------------------CSCHHHHHHTCSEEEECCCC----TTCBCGGGS--
T ss_pred HHH-HHCCCeEEEEeCC----------------------------CcCHHHHhccCCEEEECCCC----CCCCCHHHc--
Confidence 997 6899999987642 13788999999999999983 456777655
Q ss_pred CCCCcEEEEcCCCcc
Q 016162 262 MKKEAILVNCSRGPV 276 (394)
Q Consensus 262 mk~gailIN~aRG~~ 276 (394)
|+|+++||++.-.+
T Consensus 224 -k~GavVIDvgi~~~ 237 (286)
T 4a5o_A 224 -KEGAIVIDVGINRQ 237 (286)
T ss_dssp -CTTCEEEECCSCSS
T ss_pred -CCCeEEEEeccccc
Confidence 99999999987654
No 104
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.60 E-value=1.2e-07 Score=88.49 Aligned_cols=105 Identities=24% Similarity=0.345 Sum_probs=73.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc----EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM----NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~----~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
++|||||+|+||+.+++.| ...|. +|++|||++... +...+.+ + .....+++++++++|+|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l-~~~g~~~~~~V~~~~r~~~~~-~~~~~~~-------g-----~~~~~~~~e~~~~aDvVi 68 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGM-INKNIVSSNQIICSDLNTANL-KNASEKY-------G-----LTTTTDNNEVAKNADILI 68 (247)
T ss_dssp CCEEEECCSHHHHHHHHHH-HHTTSSCGGGEEEECSCHHHH-HHHHHHH-------C-----CEECSCHHHHHHHCSEEE
T ss_pred CeEEEECccHHHHHHHHHH-HhCCCCCCCeEEEEeCCHHHH-HHHHHHh-------C-----CEEeCChHHHHHhCCEEE
Confidence 5899999999999999998 56787 999999987643 2221111 2 123468899999999999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
+|+|. .....++ ++....++++.++|.+.-|- ..+.|.+.+..
T Consensus 69 lav~~-~~~~~v~-~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 69 LSIKP-DLYASII-NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ECSCT-TTHHHHC----CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred EEeCH-HHHHHHH-HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 99973 3444454 44556688999999776553 35566666643
No 105
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.59 E-value=4.9e-07 Score=92.79 Aligned_cols=153 Identities=20% Similarity=0.264 Sum_probs=94.0
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhh---hcCCCCc--------cccccCCHHHH
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---ANGEQPV--------TWKRASSMDEV 233 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~l~el 233 (394)
-++|||||.|.||..+|..++ ..|.+|++||++.+..... .+.+...+. ..|.... ......+++ .
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~l~~~-~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 81 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAA-SHGHQVLLYDISAEALTRA-IDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-A 81 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHH-HHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-G
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCeEEEEECCHHHHHHH-HHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-H
Confidence 358999999999999999984 6799999999998653221 111101111 1121110 011234664 5
Q ss_pred hcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEE-EEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccC
Q 016162 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAIL-VNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEM 312 (394)
Q Consensus 234 l~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gail-IN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~ 312 (394)
+++||+|+.++|.+.+.+.-+-++..+.++++++| .|+|.- ....|.+.+.. .-...++..|..-|. +
T Consensus 82 ~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti---~i~~ia~~~~~-p~~~ig~hf~~Pa~v-------~ 150 (483)
T 3mog_A 82 LAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSI---SITAIAAEIKN-PERVAGLHFFNPAPV-------M 150 (483)
T ss_dssp GGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSS---CHHHHTTTSSS-GGGEEEEEECSSTTT-------C
T ss_pred hcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCC---CHHHHHHHccC-ccceEEeeecChhhh-------C
Confidence 89999999999977666544445667778999999 566653 34556655543 345677777763332 2
Q ss_pred CceEEcCCCCCCcHHHHHHH
Q 016162 313 KNAIVVPHIASASKWTREGM 332 (394)
Q Consensus 313 ~nvilTPHia~~t~~~~~~~ 332 (394)
+-+.+.|+- .++.++.+.+
T Consensus 151 ~Lvevv~g~-~Ts~e~~~~~ 169 (483)
T 3mog_A 151 KLVEVVSGL-ATAAEVVEQL 169 (483)
T ss_dssp CEEEEEECS-SCCHHHHHHH
T ss_pred CeEEEecCC-CCCHHHHHHH
Confidence 446666653 2345554443
No 106
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.59 E-value=1.3e-06 Score=83.17 Aligned_cols=171 Identities=17% Similarity=0.235 Sum_probs=110.5
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHH-HHHHhcccCCcEEEEcccCccccchh
Q 016162 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (394)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~-~l~~l~~l~~k~I~~~g~G~d~id~~ 103 (394)
..++.|.+.+....++ ..+++|+.+.+. ++.++|++..+ ..++++ ++++..-. |=+ -|+-.+.+-
T Consensus 57 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----Dg~~~~N~g 129 (285)
T 3p2o_A 57 ACEECGIKSLVYHLNE-NITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISS--KDV----DGFHPINVG 129 (285)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--GCT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcc--ccc----ccCCHhhhh
Confidence 3455688777666554 357888887662 25899999865 445543 44544222 211 011111111
Q ss_pred HHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-HHHHHHH
Q 016162 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYAR 182 (394)
Q Consensus 104 ~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~-IG~~vA~ 182 (394)
.. +.+.++.....++.-++-++ ++ .+.+++||++.|||.|. +|+.+|.
T Consensus 130 ~l------~~g~~~g~~PcTp~gv~~lL----~~---------------------~~i~l~Gk~vvVvGrs~iVG~p~A~ 178 (285)
T 3p2o_A 130 YL------NLGLESGFLPCTPLGVMKLL----KA---------------------YEIDLEGKDAVIIGASNIVGRPMAT 178 (285)
T ss_dssp HH------HTTCCSSCCCHHHHHHHHHH----HH---------------------TTCCCTTCEEEEECCCTTTHHHHHH
T ss_pred hh------hcCCCCCCCCCCHHHHHHHH----HH---------------------hCCCCCCCEEEEECCCchHHHHHHH
Confidence 11 11223323445555554222 11 23579999999999998 6999999
Q ss_pred HHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcC
Q 016162 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATM 262 (394)
Q Consensus 183 ~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~m 262 (394)
.| .+.|++|++.+++. .++++.+++||+|+.+++. .++|..+.+
T Consensus 179 lL-~~~gAtVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~v--- 222 (285)
T 3p2o_A 179 ML-LNAGATVSVCHIKT----------------------------KDLSLYTRQADLIIVAAGC----VNLLRSDMV--- 222 (285)
T ss_dssp HH-HHTTCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSSC----TTCBCGGGS---
T ss_pred HH-HHCCCeEEEEeCCc----------------------------hhHHHHhhcCCEEEECCCC----CCcCCHHHc---
Confidence 97 68999999887531 4788999999999999983 456777654
Q ss_pred CCCcEEEEcCCCcc
Q 016162 263 KKEAILVNCSRGPV 276 (394)
Q Consensus 263 k~gailIN~aRG~~ 276 (394)
|+|+++||++.-.+
T Consensus 223 k~GavVIDVgi~~~ 236 (285)
T 3p2o_A 223 KEGVIVVDVGINRL 236 (285)
T ss_dssp CTTEEEEECCCEEC
T ss_pred CCCeEEEEeccCcc
Confidence 99999999987554
No 107
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.58 E-value=1.8e-07 Score=90.62 Aligned_cols=116 Identities=18% Similarity=0.179 Sum_probs=79.4
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
..+++|||||+|.||+.+++.+++.+|. +|.+|||+.... +++.+.+ +. ......+++++++++|+|+
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~-~~l~~~~-------~~---~~~~~~~~~e~v~~aDiVi 201 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENA-EKFADTV-------QG---EVRVCSSVQEAVAGADVII 201 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHH-HHHHHHS-------SS---CCEECSSHHHHHTTCSEEE
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHH-HHHHHHh-------hC---CeEEeCCHHHHHhcCCEEE
Confidence 3567999999999999999988555677 899999987653 2222211 11 1123468999999999999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeec
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDV 298 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV 298 (394)
+|+|. +..++.. ..+++|.++++++....- ...|.+.+.+.. ...+|-
T Consensus 202 ~atp~---~~~v~~~---~~l~~g~~vi~~g~~~p~-~~el~~~~~~~g--~~~vD~ 249 (312)
T 2i99_A 202 TVTLA---TEPILFG---EWVKPGAHINAVGASRPD-WRELDDELMKEA--VLYVDS 249 (312)
T ss_dssp ECCCC---SSCCBCG---GGSCTTCEEEECCCCSTT-CCSBCHHHHHHS--EEEESC
T ss_pred EEeCC---CCcccCH---HHcCCCcEEEeCCCCCCC-ceeccHHHHhcC--EEEECC
Confidence 99994 3556654 568999999999876652 244444333321 355563
No 108
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.57 E-value=7.7e-08 Score=88.08 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=68.3
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.+++|+|||+|.||+.+|+.+ ...|.+|+++||+.... +. +...+ . .. .+++++++++|+|++|
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l-~~~g~~V~~~~r~~~~~-~~--------~~~~g---~--~~-~~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRL-VGSGFKVVVGSRNPKRT-AR--------LFPSA---A--QV-TFQEEAVSSPEVIFVA 90 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHH-HHTTCCEEEEESSHHHH-HH--------HSBTT---S--EE-EEHHHHTTSCSEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH--------HHHcC---C--ce-ecHHHHHhCCCEEEEC
Confidence 457899999999999999998 57789999999987542 11 11111 1 11 2788899999999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccC
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 278 (394)
+|. .....++. +..+.+++++|++++|...+
T Consensus 91 v~~-~~~~~v~~---l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 91 VFR-EHYSSLCS---LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp SCG-GGSGGGGG---GHHHHTTCEEEECCCCCHHH
T ss_pred CCh-HHHHHHHH---HHHhcCCCEEEEeCCCcccc
Confidence 994 34455553 33333799999999987643
No 109
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.56 E-value=1.1e-07 Score=90.64 Aligned_cols=93 Identities=18% Similarity=0.279 Sum_probs=69.4
Q ss_pred CeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+|||+ |.||+.+|+.| ...|.+|++|||+..... .. ...|. . ..++.+.+++||+|++|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l-~~~g~~V~~~~r~~~~~~-~~--------~~~g~---~---~~~~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKI-HDSAHHLAAIEIAPEGRD-RL--------QGMGI---P---LTDGDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHSSSEEEEECCSHHHHH-HH--------HHTTC---C---CCCSSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHH-HhCCCEEEEEECCHHHHH-HH--------HhcCC---C---cCCHHHHhcCCCEEEEcC
Confidence 58999999 99999999998 578999999999875421 11 11121 1 135667889999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~~ 276 (394)
|.. .+..++ ++....+++++++|+++.|..
T Consensus 76 ~~~-~~~~v~-~~l~~~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 76 PDN-IIEKVA-EDIVPRVRPGTIVLILDAAAP 105 (286)
T ss_dssp CHH-HHHHHH-HHHGGGSCTTCEEEESCSHHH
T ss_pred Cch-HHHHHH-HHHHHhCCCCCEEEECCCCch
Confidence 943 355555 455567899999999988763
No 110
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.55 E-value=4.3e-07 Score=84.87 Aligned_cols=102 Identities=16% Similarity=0.215 Sum_probs=73.4
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|||||+|.||+.+++.| ...|.+|.+||+++... +...+.| |. ....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~mG~~~a~~l-~~~g~~v~~~~~~~~~~-~~~~~~~-------g~-----~~~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGL-KQTPHELIISGSSLERS-KEIAEQL-------AL-----PYAMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTSSCEEEEECSSHHHH-HHHHHHH-------TC-----CBCSSHHHHHHTCSEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHH-HhCCCeEEEECCCHHHH-HHHHHHc-------CC-----EeeCCHHHHHhcCCEEEEEeC
Confidence 4899999999999999998 57789999999987542 2222222 21 124688999999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
.... .+.+..+++|.++|++..|-. .+.+.+.+..+
T Consensus 70 -~~~~-----~~v~~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 70 -PQLF-----ETVLKPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp -GGGH-----HHHHTTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred -cHhH-----HHHHHHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 3333 334455678999999976543 45566666543
No 111
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.55 E-value=2.4e-06 Score=81.45 Aligned_cols=170 Identities=14% Similarity=0.219 Sum_probs=109.5
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHH-HHHHhcccCCcEEEEcccCccccchh
Q 016162 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDVN 103 (394)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~-~l~~l~~l~~k~I~~~g~G~d~id~~ 103 (394)
..++.|.+.+....++ ..+++|+.+.+. ++.++|++..+ ..++++ +++...-- |=+ -|+-.+.+-
T Consensus 58 ~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----DG~~~~N~G 130 (285)
T 3l07_A 58 ACAQVGIDSQVITLPE-HTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPE--KDV----DGFHPTNVG 130 (285)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGG--GBT----TCCSHHHHH
T ss_pred HHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhee
Confidence 3455688777666554 357888877662 25889999865 445543 44444322 211 022112221
Q ss_pred HHhhCCceEecC-CCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-HHHHHH
Q 016162 104 AANKYGIAVGNT-PGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (394)
Q Consensus 104 ~a~~~gI~v~n~-p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~-IG~~vA 181 (394)
... .+. ++ ....++.-++-++ + ..+.+++||++.|||.|. +|+.+|
T Consensus 131 ~l~------~g~~~~-~~PcTp~gv~~lL----~---------------------~~~i~l~Gk~vvVIG~s~iVG~p~A 178 (285)
T 3l07_A 131 RLQ------LRDKKC-LESCTPKGIMTML----R---------------------EYGIKTEGAYAVVVGASNVVGKPVS 178 (285)
T ss_dssp HHH------HTCTTC-CCCHHHHHHHHHH----H---------------------HTTCCCTTCEEEEECCCTTTHHHHH
T ss_pred ehh------cCCCCC-CCCCCHHHHHHHH----H---------------------HhCCCCCCCEEEEECCCchhHHHHH
Confidence 111 112 33 3445555554322 1 123579999999999998 699999
Q ss_pred HHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhc
Q 016162 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (394)
Q Consensus 182 ~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~ 261 (394)
+.| .+.|++|++.+++ ..++++.+++||+|+.+++. .++|..+.+
T Consensus 179 ~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~v-- 223 (285)
T 3l07_A 179 QLL-LNAKATVTTCHRF----------------------------TTDLKSHTTKADILIVAVGK----PNFITADMV-- 223 (285)
T ss_dssp HHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSEEEECCCC----TTCBCGGGS--
T ss_pred HHH-HHCCCeEEEEeCC----------------------------chhHHHhcccCCEEEECCCC----CCCCCHHHc--
Confidence 997 7899999988653 14788999999999999982 446777654
Q ss_pred CCCCcEEEEcCCCcc
Q 016162 262 MKKEAILVNCSRGPV 276 (394)
Q Consensus 262 mk~gailIN~aRG~~ 276 (394)
|+|+++||++.-.+
T Consensus 224 -k~GavVIDvgi~~~ 237 (285)
T 3l07_A 224 -KEGAVVIDVGINHV 237 (285)
T ss_dssp -CTTCEEEECCCEEE
T ss_pred -CCCcEEEEecccCc
Confidence 99999999987553
No 112
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.55 E-value=2e-06 Score=82.56 Aligned_cols=168 Identities=14% Similarity=0.231 Sum_probs=109.4
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--cc--ccHH-HHHHhcccCCcEEEEcccCccccc-
Q 016162 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--ED--WGET-LFAALSRAGGKAFSNMAVGYNNVD- 101 (394)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~--i~~~-~l~~l~~l~~k~I~~~g~G~d~id- 101 (394)
.++.|++.+....++ ..+++|+.+.+. ++.|+|+++.+ .. +++. ++++..-. | -+|.+-
T Consensus 60 ~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~~~id~~~i~~~I~p~--K-------DVDG~hp 129 (301)
T 1a4i_A 60 AEEIGIKATHIKLPR-TTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPE--K-------DVDGLTS 129 (301)
T ss_dssp HHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSSCCCSSCCCHHHHHHTSCGG--G-------BTTCCSH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCcEEEEeccCCCCCccCHHHHHhccCCC--C-------CccCCCh
Confidence 455688877666554 357888877663 25799999864 33 5554 34443221 2 233332
Q ss_pred --hhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-HHH
Q 016162 102 --VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGS 178 (394)
Q Consensus 102 --~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~-IG~ 178 (394)
+-... .|- ..+ .....+++-++-++ ++ .+.+++|+++.|||.|+ +|+
T Consensus 130 ~N~G~l~-~g~---~~~-~~~PcTp~gi~~ll----~~---------------------~~i~l~gk~vvVIG~s~iVG~ 179 (301)
T 1a4i_A 130 INAGRLA-RGD---LND-CFIPCTPKGCLELI----KE---------------------TGVPIAGRHAVVVGRSKIVGA 179 (301)
T ss_dssp HHHHHHH-TTC---CSS-CCCCHHHHHHHHHH----HT---------------------TTCCCTTCEEEEECCCTTTHH
T ss_pred hhHHHHh-cCC---CCC-CccCchHHHHHHHH----HH---------------------cCCCCCCCEEEEECCCchHHH
Confidence 21111 110 012 23445555543222 21 23579999999999996 699
Q ss_pred HHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHH
Q 016162 179 AYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER 258 (394)
Q Consensus 179 ~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~ 258 (394)
.+|+.| .+.|++|++.+++ ..++.+.+++||+|+.+++. .++|..+.
T Consensus 180 p~A~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 226 (301)
T 1a4i_A 180 PMHDLL-LWNNATVTTCHSK----------------------------TAHLDEEVNKGDILVVATGQ----PEMVKGEW 226 (301)
T ss_dssp HHHHHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSEEEECCCC----TTCBCGGG
T ss_pred HHHHHH-HhCCCeEEEEECC----------------------------cccHHHHhccCCEEEECCCC----cccCCHHH
Confidence 999997 6899999988643 14788999999999999984 34677766
Q ss_pred HhcCCCCcEEEEcCCCcc
Q 016162 259 LATMKKEAILVNCSRGPV 276 (394)
Q Consensus 259 l~~mk~gailIN~aRG~~ 276 (394)
+ |+|+++||++.-.+
T Consensus 227 v---k~GavVIDVgi~~~ 241 (301)
T 1a4i_A 227 I---KPGAIVIDCGINYV 241 (301)
T ss_dssp S---CTTCEEEECCCBC-
T ss_pred c---CCCcEEEEccCCCc
Confidence 4 79999999998654
No 113
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.55 E-value=1.2e-07 Score=86.41 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=61.0
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.++.+++|+|||+|.||+.+|+.| ...|.+|++|||+.. .+++||+|
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l-~~~g~~V~~~~~~~~--------------------------------~~~~aD~v 61 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNF-EIAGHEVTYYGSKDQ--------------------------------ATTLGEIV 61 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHH-HHTTCEEEEECTTCC--------------------------------CSSCCSEE
T ss_pred cccCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHH--------------------------------HhccCCEE
Confidence 468889999999999999999998 578999999987531 45789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~ 276 (394)
++|+| +..+..++. +....++ ++++|++++|-.
T Consensus 62 i~av~-~~~~~~v~~-~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 62 IMAVP-YPALAALAK-QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp EECSC-HHHHHHHHH-HTHHHHT-TSEEEECCCCBC
T ss_pred EEcCC-cHHHHHHHH-HHHHhcC-CCEEEEECCCCC
Confidence 99999 566666653 3444567 999999999765
No 114
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.55 E-value=1.9e-06 Score=81.83 Aligned_cols=166 Identities=17% Similarity=0.202 Sum_probs=110.5
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHH-HHHHhcccCCcEEEEcccCcccc---c
Q 016162 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNV---D 101 (394)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~-~l~~l~~l~~k~I~~~g~G~d~i---d 101 (394)
.++.|++.+....++ ..+++|+.+.+. ++.|+|+++.+ ..+++. ++++..-. | -+|.+ .
T Consensus 57 ~~~~Gi~~~~~~lp~-~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~--K-------DVDG~~p~n 126 (281)
T 2c2x_A 57 CAKVGITSIRRDLPA-DISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPA--K-------DADGLHPTN 126 (281)
T ss_dssp HHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--G-------BTTSCCHHH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCcc--C-------CccCCChhh
Confidence 455688877666554 357888887762 25899999864 445543 34443222 3 23333 2
Q ss_pred hhHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChH-HHHH
Q 016162 102 VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRI-GSAY 180 (394)
Q Consensus 102 ~~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~I-G~~v 180 (394)
+-... .+.+ .....+++-++-++ ++ .+.+++||++.|||.|.| |+.+
T Consensus 127 ~g~l~------~g~~-~~~PcTp~gi~~ll----~~---------------------~~i~l~gk~vvVvG~s~iVG~p~ 174 (281)
T 2c2x_A 127 LGRLV------LGTP-APLPCTPRGIVHLL----RR---------------------YDISIAGAHVVVIGRGVTVGRPL 174 (281)
T ss_dssp HHHHH------HTCC-CCCCHHHHHHHHHH----HH---------------------TTCCCTTCEEEEECCCTTTHHHH
T ss_pred HHHHh------CCCC-CCCCChHHHHHHHH----HH---------------------cCCCCCCCEEEEECCCcHHHHHH
Confidence 22221 1223 34555666544332 11 235799999999999985 9999
Q ss_pred HHHHHhcC--CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHH
Q 016162 181 ARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER 258 (394)
Q Consensus 181 A~~la~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~ 258 (394)
|+.| .+. |++|+..+++. .++.+.+++||+|+.+++. .++|..+.
T Consensus 175 A~lL-~~~g~~atVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 221 (281)
T 2c2x_A 175 GLLL-TRRSENATVTLCHTGT----------------------------RDLPALTRQADIVVAAVGV----AHLLTADM 221 (281)
T ss_dssp HHHH-TSTTTCCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSCC----TTCBCGGG
T ss_pred HHHH-hcCCCCCEEEEEECch----------------------------hHHHHHHhhCCEEEECCCC----CcccCHHH
Confidence 9997 677 89999886532 4788999999999999982 33677776
Q ss_pred HhcCCCCcEEEEcCCCcc
Q 016162 259 LATMKKEAILVNCSRGPV 276 (394)
Q Consensus 259 l~~mk~gailIN~aRG~~ 276 (394)
+ |+|+++||+|.-.+
T Consensus 222 v---k~GavVIDVgi~r~ 236 (281)
T 2c2x_A 222 V---RPGAAVIDVGVSRT 236 (281)
T ss_dssp S---CTTCEEEECCEEEE
T ss_pred c---CCCcEEEEccCCCC
Confidence 5 89999999997654
No 115
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.54 E-value=4.1e-07 Score=88.33 Aligned_cols=108 Identities=19% Similarity=0.281 Sum_probs=75.7
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCC----cEEEEEcCchh-hHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G----~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
...++|||||+|+||..+|+.| ...| .+|++|||+.. ...+.. .. .| .....+..+.++.|
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L-~~~G~~~~~~V~v~~r~~~~~~~~~l-~~-------~G-----~~~~~~~~e~~~~a 85 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGF-TAAGVLAAHKIMASSPDMDLATVSAL-RK-------MG-----VKLTPHNKETVQHS 85 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHH-HHTTSSCGGGEEEECSCTTSHHHHHH-HH-------HT-----CEEESCHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHH-HHCCCCCcceEEEECCCccHHHHHHH-HH-------cC-----CEEeCChHHHhccC
Confidence 3446899999999999999998 4567 78999999874 122221 11 12 12235788999999
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
|+|++|+| ......++ .+....++++.++|+++.|-. .+.|.+.+.+
T Consensus 86 DvVilav~-~~~~~~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 86 DVLFLAVK-PHIIPFIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp SEEEECSC-GGGHHHHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred CEEEEEeC-HHHHHHHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 99999999 44555555 345566889999999987643 4556666664
No 116
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.54 E-value=5.3e-07 Score=91.21 Aligned_cols=119 Identities=10% Similarity=0.087 Sum_probs=78.0
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhh--------hhhhhhcCCCCccccccCCHHHHhccc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
++|+|||+|.||..+|..| ...|.+|++||++..... ...+.. .+.+......+ ......++++.++.|
T Consensus 1 mkI~VIG~G~vG~~~A~~l-a~~G~~V~~~d~~~~~~~-~l~~~~~~i~e~~l~~~~~~~~~~g-~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCL-SARGHEVIGVDVSSTKID-LINQGKSPIVEPGLEALLQQGRQTG-RLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHH-HHHTTCCSSCCTTHHHHHHHHHHTT-CEEEESCHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCHHHHH-HHhCCCCCcCCCCHHHHHHhhcccC-ceEEeCCHHHHhccC
Confidence 3799999999999999998 467999999999875422 111100 00000000000 122346888889999
Q ss_pred CEEEEcCCCChh---------hhhcccHHHHhcCCC---CcEEEEcCCCcccC-HHHHHHHHHc
Q 016162 238 DVISLHPVLDKT---------TYHLINKERLATMKK---EAILVNCSRGPVID-EVALVEHLKQ 288 (394)
Q Consensus 238 DiV~l~lPlt~~---------t~~li~~~~l~~mk~---gailIN~aRG~~vd-e~aL~~aL~~ 288 (394)
|+|++|+|.... ....+ ++....+++ +.++|+.|+..+-. ++.+.+.+.+
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999999995443 33333 344456788 99999998766655 5667777765
No 117
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.53 E-value=1.7e-06 Score=83.08 Aligned_cols=173 Identities=21% Similarity=0.230 Sum_probs=109.3
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHH-HHHHhcccCCcEEEEcccCccccch
Q 016162 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (394)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~-~l~~l~~l~~k~I~~~g~G~d~id~ 102 (394)
+..++.|.+.+....++ ..+++|+.+.+. ++.++|++..+ ..++++ ++++..-. |=+ -|+--+++
T Consensus 60 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~ 132 (300)
T 4a26_A 60 KAAAEVGMASFNVELPE-DISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPH--KDA----DALLPVNV 132 (300)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGG--GCT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcc--ccc----ccCCcceE
Confidence 33456788877766554 357888887662 25889999865 345544 34443221 211 01111111
Q ss_pred hHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-HHHHHH
Q 016162 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (394)
Q Consensus 103 ~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~-IG~~vA 181 (394)
-.....+ ..++ ....++.-++-++ ++ .+.+++||++.|||.|. +|+.+|
T Consensus 133 G~l~~g~----~~~~-~~PcTp~gv~~lL----~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~A 182 (300)
T 4a26_A 133 GLLHYKG----REPP-FTPCTAKGVIVLL----KR---------------------CGIEMAGKRAVVLGRSNIVGAPVA 182 (300)
T ss_dssp HHHHCTT----CCCS-CCCHHHHHHHHHH----HH---------------------HTCCCTTCEEEEECCCTTTHHHHH
T ss_pred EEeecCC----CcCC-CCCCCHHHHHHHH----HH---------------------cCCCCCCCEEEEECCCchHHHHHH
Confidence 1111110 0133 3445555544322 21 23579999999999998 699999
Q ss_pred HHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHH--HHhcccCEEEEcCCCChhhhhcccHHHH
Q 016162 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD--EVLREADVISLHPVLDKTTYHLINKERL 259 (394)
Q Consensus 182 ~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--ell~~aDiV~l~lPlt~~t~~li~~~~l 259 (394)
+.| .+.|++|++++++. .+++ +.+++||+|+.++|. .++|.++.
T Consensus 183 ~lL-~~~gAtVtv~~~~T----------------------------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~~- 228 (300)
T 4a26_A 183 ALL-MKENATVTIVHSGT----------------------------STEDMIDYLRTADIVIAAMGQ----PGYVKGEW- 228 (300)
T ss_dssp HHH-HHTTCEEEEECTTS----------------------------CHHHHHHHHHTCSEEEECSCC----TTCBCGGG-
T ss_pred HHH-HHCCCeEEEEeCCC----------------------------CCchhhhhhccCCEEEECCCC----CCCCcHHh-
Confidence 997 68899999987632 2455 889999999999983 34677765
Q ss_pred hcCCCCcEEEEcCCCcc
Q 016162 260 ATMKKEAILVNCSRGPV 276 (394)
Q Consensus 260 ~~mk~gailIN~aRG~~ 276 (394)
+|+|+++||++.-.+
T Consensus 229 --vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 229 --IKEGAAVVDVGTTPV 243 (300)
T ss_dssp --SCTTCEEEECCCEEE
T ss_pred --cCCCcEEEEEeccCC
Confidence 499999999987544
No 118
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.52 E-value=5.4e-07 Score=91.69 Aligned_cols=119 Identities=15% Similarity=0.168 Sum_probs=79.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCC--------CccccccCCHHHHhccc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLREA 237 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~a 237 (394)
++|+|||+|.||..+|..| ...|.+|++||++.... +...+.... ....+.. ........++++.++.|
T Consensus 3 mkI~VIG~G~vG~~lA~~L-a~~G~~V~~~D~~~~~v-~~l~~g~~~-i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCF-AELGANVRCIDTDRNKI-EQLNSGTIP-IYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHHHTCSC-CCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHH-HhcCCEEEEEECCHHHH-HHHHcCCCc-ccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 5899999999999999998 46799999999987642 211110000 0000000 00122346899999999
Q ss_pred CEEEEcCCCCh---------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 238 DVISLHPVLDK---------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 238 DiV~l~lPlt~---------~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
|+|++|+|... .....+ +...+.+++|.++|+.|.-.+-..+.+.+.+++
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999999543 233333 456677899999999997665556667766655
No 119
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.46 E-value=7.1e-07 Score=90.67 Aligned_cols=112 Identities=15% Similarity=0.189 Sum_probs=80.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCC----------------ccccccCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP----------------VTWKRASS 229 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 229 (394)
-+++|||+|.+|..+|..|+ ..|.+|++||++...... +.. +..+ -......+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La-~~G~~V~~~D~~~~kv~~---------l~~-g~~~~~epgl~~~~~~~~~~g~l~~ttd 77 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFS-DFGHEVVCVDKDARKIEL---------LHQ-NVMPIYEPGLDALVASNVKAGRLSFTTD 77 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCSTTHHH---------HTT-TCCSSCCTTHHHHHHHHHHTTCEEEESC
T ss_pred eEEEEEcCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHH---------Hhc-CCCCccCCCHHHHHHhhcccCCEEEECC
Confidence 47999999999999999984 679999999998765321 111 1100 01223468
Q ss_pred HHHHhcccCEEEEcCCCChh----------hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 230 MDEVLREADVISLHPVLDKT----------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 230 l~ell~~aDiV~l~lPlt~~----------t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
+.+.++.||+|++|+|.... .+..+ +...+.+++|.++|+.|+-.+-..+.+.+.+.+.
T Consensus 78 ~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~ 146 (446)
T 4a7p_A 78 LAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV 146 (446)
T ss_dssp HHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh
Confidence 99999999999999884321 22222 4566789999999999976666667777777653
No 120
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.45 E-value=3.1e-07 Score=87.52 Aligned_cols=106 Identities=11% Similarity=0.093 Sum_probs=75.1
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCc---EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
.++|||||+|+||+.+++.+ ...|. +|++|||+.... +...+.| | .....+..+++++||+|+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l-~~~g~~~~~V~v~dr~~~~~-~~l~~~~-------g-----i~~~~~~~~~~~~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGL-IANGYDPNRICVTNRSLDKL-DFFKEKC-------G-----VHTTQDNRQGALNADVVV 68 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHH-HHTTCCGGGEEEECSSSHHH-HHHHHTT-------C-----CEEESCHHHHHSSCSEEE
T ss_pred CCEEEEEcccHHHHHHHHHH-HHCCCCCCeEEEEeCCHHHH-HHHHHHc-------C-----CEEeCChHHHHhcCCeEE
Confidence 46899999999999999998 46677 899999987653 2222211 2 223468889999999999
Q ss_pred EcCCCChhhhhcccHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 242 LHPVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~-mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
+++|. .....++ ++.-.. ++++.++|+++-|-. .+.|.+.+..
T Consensus 69 lav~p-~~~~~vl-~~l~~~~l~~~~iiiS~~agi~--~~~l~~~l~~ 112 (280)
T 3tri_A 69 LAVKP-HQIKMVC-EELKDILSETKILVISLAVGVT--TPLIEKWLGK 112 (280)
T ss_dssp ECSCG-GGHHHHH-HHHHHHHHTTTCEEEECCTTCC--HHHHHHHHTC
T ss_pred EEeCH-HHHHHHH-HHHHhhccCCCeEEEEecCCCC--HHHHHHHcCC
Confidence 99983 3344444 333344 688889998876643 5677777764
No 121
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.40 E-value=4.7e-07 Score=84.68 Aligned_cols=102 Identities=17% Similarity=0.193 Sum_probs=68.9
Q ss_pred CeEEEEecChHHHHHHHHHHhcCC-cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+|||+|.||+.+|+.| ...| .+|++|||++... +...+.| |. ....++++++ .+|+|++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l-~~~g~~~v~~~~r~~~~~-~~~~~~~-------g~-----~~~~~~~~~~-~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGL-VKQGGYRIYIANRGAEKR-ERLEKEL-------GV-----ETSATLPELH-SDDVLILAV 65 (263)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHHCSCEEEEECSSHHHH-HHHHHHT-------CC-----EEESSCCCCC-TTSEEEECS
T ss_pred CEEEEECchHHHHHHHHHH-HHCCCCeEEEECCCHHHH-HHHHHhc-------CC-----EEeCCHHHHh-cCCEEEEEe
Confidence 3799999999999999998 4668 8999999987543 2211111 21 1234566777 999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
| ......++.. +.. + +.++|+++.|-- .+.|.+.+..+
T Consensus 66 ~-~~~~~~v~~~--l~~-~-~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 66 K-PQDMEAACKN--IRT-N-GALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp C-HHHHHHHHTT--CCC-T-TCEEEECCTTCC--HHHHHHHTTSC
T ss_pred C-chhHHHHHHH--hcc-C-CCEEEEecCCCC--HHHHHHHcCCC
Confidence 9 4444444321 222 4 899999966543 36677776653
No 122
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.37 E-value=1.4e-06 Score=84.81 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=75.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCC-Cccc-cccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-PVTW-KRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~ell~~aDiV~l~ 243 (394)
++|+|||+|.||..+|..| ...|.+|++||++.... +...+.++-.+...+.. .... ....+++++++.+|+|++|
T Consensus 5 mki~iiG~G~~G~~~a~~L-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYL-ALKGQSVLAWDIDAQRI-KEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHH-HHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5899999999999999998 57799999999987542 22111110000000000 0000 1235888989999999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
+|... +..++ ++....+++++++|++ .|.......+.+.+.+
T Consensus 83 v~~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 83 VPAIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp SCGGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred CCchH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 99543 44444 4556778999999998 4422244445555554
No 123
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.37 E-value=3e-06 Score=90.96 Aligned_cols=155 Identities=17% Similarity=0.140 Sum_probs=92.3
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHH--HHHhhhhhhhhcCCCCc--------cccccCCHHHHh
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQPV--------TWKRASSMDEVL 234 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~l~ell 234 (394)
=++|||||+|.||..+|..++ ..|.+|++||++.+..... ......+.+...|.... ......++ +.+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSA-SKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHH-HTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred CCEEEEECCChhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 357999999999999999984 6699999999987643211 00100000111221110 01123456 568
Q ss_pred cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCc
Q 016162 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKN 314 (394)
Q Consensus 235 ~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~n 314 (394)
++||+|+.++|.+.+.+.-+-.+..+.++++++++..+.+ +....+.+.+.. .-...+++.|. |.. .++.
T Consensus 392 ~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-~~~~ig~hf~~--P~~-----~~~l 461 (715)
T 1wdk_A 392 GNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALKR-PENFVGMHFFN--PVH-----MMPL 461 (715)
T ss_dssp GGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCSC-GGGEEEEECCS--STT-----TCCE
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhcC-ccceEEEEccC--Ccc-----cCce
Confidence 9999999999977765544445666788999999754433 333455555432 22456777665 322 2345
Q ss_pred eEEcCCCCCCcHHHHHHH
Q 016162 315 AIVVPHIASASKWTREGM 332 (394)
Q Consensus 315 vilTPHia~~t~~~~~~~ 332 (394)
+.+.|+- .++.++.+.+
T Consensus 462 vevv~g~-~t~~e~~~~~ 478 (715)
T 1wdk_A 462 VEVIRGE-KSSDLAVATT 478 (715)
T ss_dssp EEEEECS-SCCHHHHHHH
T ss_pred EEEEECC-CCCHHHHHHH
Confidence 6566642 2345555443
No 124
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.36 E-value=2.4e-06 Score=84.22 Aligned_cols=110 Identities=13% Similarity=0.125 Sum_probs=73.8
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhh-hcCC-CCccccccCCHHHHhcccCEEEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGE-QPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~ell~~aDiV~l 242 (394)
.++|+|||.|.+|..+|..| ...|.+|.+|+|++... +...+. +.... ..+. .+.......++++.++.||+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~L-a~~G~~V~l~~r~~~~~-~~i~~~-~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVL-ARKGQKVRLWSYESDHV-DEMQAE-GVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HTTTCCEEEECSCHHHH-HHHHHH-SSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHH-HHHHHc-CCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 46899999999999999998 57789999999986542 211110 00000 0000 01112234689999999999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCH
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE 279 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde 279 (394)
++|. ...+.++ ++....+++++++|+++.|-..++
T Consensus 106 aVp~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t 140 (356)
T 3k96_A 106 VVPS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGS 140 (356)
T ss_dssp CCCH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTT
T ss_pred CCCH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCc
Confidence 9993 3444444 455567899999999988766553
No 125
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.33 E-value=2.5e-06 Score=77.04 Aligned_cols=124 Identities=12% Similarity=0.144 Sum_probs=80.9
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+||| .|.||+.+++.| ...|.+|+++||+.... +...+.++.... .+ . .. ..++++.++++|+|++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l-~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~-~~--~--~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRL-ATLGHEIVVGSRREEKA-EAKAAEYRRIAG-DA--S--IT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HTTTCEEEEEESSHHHH-HHHHHHHHHHHS-SC--C--EE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHHHhccccc-cC--C--CC-hhhHHHHHhcCCEEEEeC
Confidence 3799999 999999999998 57799999999986542 221111110000 00 0 11 257888899999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccC------------HHHHHHHHHcCCcceEEeeccCCCCC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVID------------EVALVEHLKQNPMFRVGLDVFEDEPY 304 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd------------e~aL~~aL~~g~l~gaalDV~~~EP~ 304 (394)
| ...+..++. +....++ +.++|++++|--.+ .+.|.+.+.. ...++.+.+.|.
T Consensus 73 ~-~~~~~~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~~ 137 (212)
T 1jay_A 73 P-WEHAIDTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIPA 137 (212)
T ss_dssp C-HHHHHHHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCCH
T ss_pred C-hhhHHHHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchHH
Confidence 9 334444442 2333454 89999999876543 5667776652 235677766653
No 126
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.32 E-value=2.8e-06 Score=87.06 Aligned_cols=119 Identities=18% Similarity=0.169 Sum_probs=78.0
Q ss_pred CeEEEEecChHHHHHHHHHHhc-CCcEEEEEcCchhhHHHHHHHhh--------hhhhhhcCCCCccccccCCHHHHhcc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAY--------GQFLKANGEQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~-~G~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (394)
++|+|||+|.||..+|..|++. .|.+|++||++...... ..+.. .+.+... . ........++.+.++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~-l~~g~~~i~e~gl~~~~~~~-~-~~~l~~t~~~~~~~~~ 86 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAE-WNSDKLPIYEPGLDEIVFAA-R-GRNLFFSSDIPKAIAE 86 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHH-HTSSSCSSCCTTHHHHHHHH-B-TTTEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHH-HHCCCCCcCCCCHHHHHHHh-h-cCCEEEECCHHHHhhc
Confidence 5899999999999999998654 38999999998764221 11000 0000000 0 0012223577888999
Q ss_pred cCEEEEcCCCChh--------------hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 237 ADVISLHPVLDKT--------------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 237 aDiV~l~lPlt~~--------------t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
||+|++|+|.... ....+ +...+.+++|.++|+.|+-.+-..+.+.+.+.+
T Consensus 87 aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 87 ADLIFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CCEEEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999999984321 12222 445677999999999987666566778887776
No 127
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.32 E-value=2.7e-06 Score=85.16 Aligned_cols=111 Identities=15% Similarity=0.225 Sum_probs=76.7
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCC-------------CccccccCCHHH
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-------------PVTWKRASSMDE 232 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~e 232 (394)
++|+|||+|.||..+|..|+ . |.+|++||++.... +.. ...+.. ........++.+
T Consensus 1 MkI~VIG~G~vG~~~A~~La-~-G~~V~~~d~~~~~~-~~l--------~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~ 69 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLS-L-QNEVTIVDILPSKV-DKI--------NNGLSPIQDEYIEYYLKSKQLSIKATLDSKA 69 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHT-T-TSEEEEECSCHHHH-HHH--------HTTCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHh-C-CCEEEEEECCHHHH-HHH--------HcCCCCcCCCCHHHHHHhccCcEEEeCCHHH
Confidence 37999999999999999984 5 89999999987542 211 111110 001122357888
Q ss_pred HhcccCEEEEcCCCCh----------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 233 VLREADVISLHPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 233 ll~~aDiV~l~lPlt~----------~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
.++.||+|++|+|... .....+ +.... +++++++|+.+.-++-..+.+.+.+.+.
T Consensus 70 ~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 70 AYKEAELVIIATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp HHHHCSEEEECCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred HhcCCCEEEEecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 8999999999999653 233333 34455 8899999998887776677777766543
No 128
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.32 E-value=7.1e-06 Score=83.67 Aligned_cols=153 Identities=17% Similarity=0.157 Sum_probs=88.9
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHh----hhhh-----hhhcCCCCccccccCCHHHHhc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA----YGQF-----LKANGEQPVTWKRASSMDEVLR 235 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~l~ell~ 235 (394)
-++|+|||.|.||..+|..+ ...|.+|++||++...... ..+. +... +..............++ +.++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~l-a~~G~~V~l~D~~~~~~~~-~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~ 113 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISF-ARVGISVVAVESDPKQLDA-AKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELS 113 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HTTTCEEEEECSSHHHHHH-HHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGT
T ss_pred CCEEEEECcCHHHHHHHHHH-HhCCCeEEEEECCHHHHHH-HHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHC
Confidence 46899999999999999998 4779999999998754221 1110 0000 00000000001113466 4688
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCce
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNA 315 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nv 315 (394)
+||+|+.++|.+.+...-+-++..+.++++++|++.+.+ +....|.+.+.. .-...+++.|. |.. .++.+
T Consensus 114 ~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~--~~~~~la~~~~~-~~~~ig~hf~~--P~~-----~~~lv 183 (463)
T 1zcj_A 114 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDR-PQLVIGTHFFS--PAH-----VMRLL 183 (463)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEEECS--STT-----TCCEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--cCHHHHHHHhcC-CcceEEeecCC--Ccc-----cceeE
Confidence 999999999966544433334556678999999874333 334466665542 23456777663 321 23445
Q ss_pred EEcCCCCCCcHHHHHH
Q 016162 316 IVVPHIASASKWTREG 331 (394)
Q Consensus 316 ilTPHia~~t~~~~~~ 331 (394)
.+.|+-+ ++.++.+.
T Consensus 184 evv~g~~-t~~e~~~~ 198 (463)
T 1zcj_A 184 EVIPSRY-SSPTTIAT 198 (463)
T ss_dssp EEEECSS-CCHHHHHH
T ss_pred EEeCCCC-CCHHHHHH
Confidence 5666533 34454443
No 129
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.31 E-value=1.5e-06 Score=82.95 Aligned_cols=169 Identities=16% Similarity=0.159 Sum_probs=108.5
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHHH-HHHhcccCCcEEEEcccCccccchhH
Q 016162 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETL-FAALSRAGGKAFSNMAVGYNNVDVNA 104 (394)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~~-l~~l~~l~~k~I~~~g~G~d~id~~~ 104 (394)
.++.|++.+....++ ..+++|+.+.+. ++.|+|+++.+ ..+++.. +++..-. | -+|.+--..
T Consensus 58 ~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~--K-------DVDG~~p~n 127 (288)
T 1b0a_A 58 CEEVGFVSRSYDLPE-TTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPD--K-------DVDGFHPYN 127 (288)
T ss_dssp HHHHTCEECCEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTT--T-------CTTCCSHHH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCc--c-------CcccCCccc
Confidence 445677766555443 357888877662 25799999864 4454443 3333211 2 233332111
Q ss_pred HhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-HHHHHHHH
Q 016162 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYARM 183 (394)
Q Consensus 105 a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~-IG~~vA~~ 183 (394)
.|-.+.+.+ .....+++-++-++ ++ .+.+++|+++.|||.|. +|+.+|+.
T Consensus 128 ---~g~l~~g~~-~~~PcTp~gi~~ll----~~---------------------~~i~l~gk~vvVIG~s~iVG~p~A~l 178 (288)
T 1b0a_A 128 ---VGRLCQRAP-RLRPCTPRGIVTLL----ER---------------------YNIDTFGLNAVVIGASNIVGRPMSME 178 (288)
T ss_dssp ---HHHHHTTCC-SSCCHHHHHHHHHH----HH---------------------TTCCCTTCEEEEECCCTTTHHHHHHH
T ss_pred ---hhHHhCCCC-CCCCCcHHHHHHHH----HH---------------------cCCCCCCCEEEEECCChHHHHHHHHH
Confidence 111111223 34555666544322 11 23579999999999997 59999999
Q ss_pred HHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCC
Q 016162 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMK 263 (394)
Q Consensus 184 la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk 263 (394)
| .+.|++|+..+++. .++.+.+++||+|+.+++. .++|..+.+ |
T Consensus 179 L-~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~Avg~----p~lI~~~~v---k 222 (288)
T 1b0a_A 179 L-LLAGCTTTVTHRFT----------------------------KNLRHHVENADLLIVAVGK----PGFIPGDWI---K 222 (288)
T ss_dssp H-HTTTCEEEEECSSC----------------------------SCHHHHHHHCSEEEECSCC----TTCBCTTTS---C
T ss_pred H-HHCCCeEEEEeCCc----------------------------hhHHHHhccCCEEEECCCC----cCcCCHHHc---C
Confidence 7 78999999886532 4788999999999999982 336777664 8
Q ss_pred CCcEEEEcCCCcc
Q 016162 264 KEAILVNCSRGPV 276 (394)
Q Consensus 264 ~gailIN~aRG~~ 276 (394)
+|+++||+|.-.+
T Consensus 223 ~GavVIDVgi~r~ 235 (288)
T 1b0a_A 223 EGAIVIDVGINRL 235 (288)
T ss_dssp TTCEEEECCCEEC
T ss_pred CCcEEEEccCCcc
Confidence 9999999998654
No 130
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.30 E-value=2.3e-06 Score=82.61 Aligned_cols=110 Identities=17% Similarity=0.144 Sum_probs=72.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcC--chhhHHHHHHHhhhhhhhhcCCC---C---ccccccC--CHHHHhc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQ---P---VTWKRAS--SMDEVLR 235 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~--~l~ell~ 235 (394)
++|+|||+|.||+.+|..| ...|.+|++||+ +.... +.. ...+.. + ....... ++++.++
T Consensus 1 m~I~iiG~G~mG~~~a~~L-~~~g~~V~~~~r~~~~~~~-~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPL-VDNGNEVRIWGTEFDTEIL-KSI--------SAGREHPRLGVKLNGVEIFWPEQLEKCLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHH-HHHCCEEEEECCGGGHHHH-HHH--------HTTCCBTTTTBCCCSEEEECGGGHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHH-HhCCCeEEEEEccCCHHHH-HHH--------HHhCcCcccCccccceEEecHHhHHHHHh
Confidence 3799999999999999998 466889999999 65432 211 111110 0 0011223 6778889
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCc---c-cCHHHHHHHHHc
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP---V-IDEVALVEHLKQ 288 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~---~-vde~aL~~aL~~ 288 (394)
.+|+|++|+|.. .+..++ ..... +++++++|+++.|- - -..+.+.+.+.+
T Consensus 71 ~~D~vi~~v~~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 71 NAEVVLLGVSTD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp TCSEEEECSCGG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred cCCEEEEcCChH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 999999999943 445544 34445 88899999998774 1 122445566654
No 131
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.30 E-value=1.9e-06 Score=80.37 Aligned_cols=99 Identities=21% Similarity=0.307 Sum_probs=67.2
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCC----cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.++|||||+|.||+.+|+.|+ ..| .+|++|||+... + | .....+++++++.+|+|
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~-~~g~~~~~~v~~~~~~~~~--------~-------g-----~~~~~~~~~~~~~~D~v 62 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIA-NANIIKKENLFYYGPSKKN--------T-------T-----LNYMSSNEELARHCDII 62 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHH-HHTSSCGGGEEEECSSCCS--------S-------S-----SEECSCHHHHHHHCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCCCCCeEEEEeCCccc--------C-------c-----eEEeCCHHHHHhcCCEE
Confidence 458999999999999999984 556 689999997642 0 1 12245788999999999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
++|+| ......++ .+....++ +.++|....| ++.+.+.+.+..+
T Consensus 63 i~~v~-~~~~~~v~-~~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 63 VCAVK-PDIAGSVL-NNIKPYLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp EECSC-TTTHHHHH-HHSGGGCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred EEEeC-HHHHHHHH-HHHHHhcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 99999 34555554 23445564 4455554443 3345666666543
No 132
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.28 E-value=5.9e-06 Score=88.77 Aligned_cols=154 Identities=19% Similarity=0.130 Sum_probs=90.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHH--HHHhhhhhhhhcCCCC--------ccccccCCHHHHhc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQP--------VTWKRASSMDEVLR 235 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~l~ell~ 235 (394)
++|||||.|.||..+|..+ ...|.+|++||++.+..... ......+.+...|... .......++ +.++
T Consensus 313 ~kV~VIGaG~MG~~iA~~l-a~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 390 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATAL-ILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFR 390 (725)
T ss_dssp CCEEEECCSHHHHHHHHHH-HTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGT
T ss_pred cEEEEEcCCHhhHHHHHHH-HhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHC
Confidence 6799999999999999998 46799999999987643211 0000000011111100 011223456 5689
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCce
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNA 315 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nv 315 (394)
+||+|+.++|.+.+.+.-+-.+..+.++++++++..+.+ +....+.+.+.. .-...+++.|. |.. .++.+
T Consensus 391 ~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~--P~~-----~~~lv 460 (725)
T 2wtb_A 391 DVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFS--PAH-----IMPLL 460 (725)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECS--STT-----TCCEE
T ss_pred CCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCC--Ccc-----cCceE
Confidence 999999999977665444445566778999999654433 333455554432 22456777665 322 23456
Q ss_pred EEcCCCCCCcHHHHHHH
Q 016162 316 IVVPHIASASKWTREGM 332 (394)
Q Consensus 316 ilTPHia~~t~~~~~~~ 332 (394)
.+.|+- .++.++.+.+
T Consensus 461 evv~g~-~t~~e~~~~~ 476 (725)
T 2wtb_A 461 EIVRTN-HTSAQVIVDL 476 (725)
T ss_dssp EEEECS-SCCHHHHHHH
T ss_pred EEEECC-CCCHHHHHHH
Confidence 666542 2345554443
No 133
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.27 E-value=1.1e-06 Score=85.23 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=70.2
Q ss_pred cccccCCCeEEEEecChH-HHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc------c--CC
Q 016162 159 VGNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR------A--SS 229 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~I-G~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~ 229 (394)
.|.+++|+++.|||.|.| |+.+|+.| .+.|++|+++||+.....+. .......... . .+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L-~~~gAtVtv~nR~~~~l~~r-----------a~~la~~~~~~t~~~~t~~~~ 238 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALL-ANDGATVYSVDVNNIQKFTR-----------GESLKLNKHHVEDLGEYSEDL 238 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHH-HTTSCEEEEECSSEEEEEES-----------CCCSSCCCCEEEEEEECCHHH
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHH-HHCCCEEEEEeCchHHHHhH-----------HHHHhhhcccccccccccHhH
Confidence 456899999999999986 99999997 68999999999874321110 0001100111 1 46
Q ss_pred HHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 230 l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
+++.+++||+|+.+++. + ..+|..+.+ |+|+++||+|..
T Consensus 239 L~e~l~~ADIVIsAtg~-p--~~vI~~e~v---k~GavVIDVgi~ 277 (320)
T 1edz_A 239 LKKCSLDSDVVITGVPS-E--NYKFPTEYI---KEGAVCINFACT 277 (320)
T ss_dssp HHHHHHHCSEEEECCCC-T--TCCBCTTTS---CTTEEEEECSSS
T ss_pred HHHHhccCCEEEECCCC-C--cceeCHHHc---CCCeEEEEcCCC
Confidence 88999999999999973 1 223776664 899999999864
No 134
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.27 E-value=1.4e-06 Score=83.12 Aligned_cols=108 Identities=14% Similarity=0.116 Sum_probs=72.0
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
+++|+++.|+|.|.+|+.++..| ...|+ +|++++|+.++..+ +. .........++++.+.++|+|
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a~~---------la----~~~~~~~~~~~~~~~~~aDiV 179 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANEL-YKIVRPTLTVANRTMSRFNN---------WS----LNINKINLSHAESHLDEFDII 179 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHH-HTTCCSCCEEECSCGGGGTT---------CC----SCCEEECHHHHHHTGGGCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHHHH---------HH----HhcccccHhhHHHHhcCCCEE
Confidence 57899999999999999999998 68898 89999998764211 00 011111234566778899999
Q ss_pred EEcCCCC--hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 241 SLHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 241 ~l~lPlt--~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
+.++|.. +.....++ .+.++++.+++|+..... .+. |+++.++
T Consensus 180 InaTp~Gm~~~~~~~l~---~~~l~~~~~V~D~vY~P~-~T~-ll~~A~~ 224 (277)
T 3don_A 180 INTTPAGMNGNTDSVIS---LNRLASHTLVSDIVYNPY-KTP-ILIEAEQ 224 (277)
T ss_dssp EECCC-------CCSSC---CTTCCSSCEEEESCCSSS-SCH-HHHHHHH
T ss_pred EECccCCCCCCCcCCCC---HHHcCCCCEEEEecCCCC-CCH-HHHHHHH
Confidence 9999964 22211232 355789999999987643 344 5544443
No 135
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.26 E-value=2.3e-06 Score=81.16 Aligned_cols=165 Identities=10% Similarity=0.142 Sum_probs=106.2
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHHHH-HHhcccCCcEEEEcccCccccchhH
Q 016162 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDVNA 104 (394)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~~l-~~l~~l~~k~I~~~g~G~d~id~~~ 104 (394)
.++.|. .+....++ ..+++|+.+.+. ++.|+|+++.+ ..+++..+ ++..-. | -+|.+--..
T Consensus 52 ~~~~Gi-~~~~~lp~-~~s~~ell~~I~~lN~D~~v~GIlvqlPLP~~id~~~v~~~I~p~--K-------DVDG~~p~n 120 (276)
T 3ngx_A 52 GKKIGI-AVDLEKYD-DISMKDLLKRIDDLAKDPQINGIMIENPLPKGFDYYEIVRNIPYY--K-------DVDALSPYN 120 (276)
T ss_dssp HHHHTC-EEEEEEES-SCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTCCHHHHHTTSCGG--G-------BTTCCSHHH
T ss_pred HHHCCe-EEEEECCC-CCCHHHHHHHHHHHcCCCCCcEEEEeCCCCCCCCHHHHHhhCCCC--C-------cccCCCccc
Confidence 445688 66555544 357888887772 25899999875 45555443 332111 2 223221100
Q ss_pred HhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-HHHHHHHH
Q 016162 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYARM 183 (394)
Q Consensus 105 a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~-IG~~vA~~ 183 (394)
.|-.+.+.++ ....++.-++-++ + ..+ ++|+++.|||.|. +|+.+|+.
T Consensus 121 ---~G~l~~g~~~-~~PcTp~gv~~lL----~---------------------~~~--l~Gk~vvVvG~s~iVG~plA~l 169 (276)
T 3ngx_A 121 ---QGLIALNREF-LVPATPRAVIDIM----D---------------------YYG--YHENTVTIVNRSPVVGRPLSMM 169 (276)
T ss_dssp ---HHHHHTTCCS-SCCHHHHHHHHHH----H---------------------HHT--CCSCEEEEECCCTTTHHHHHHH
T ss_pred ---hhhhhcCCCC-CCCCcHHHHHHHH----H---------------------HhC--cCCCEEEEEcCChHHHHHHHHH
Confidence 1111112333 3445555554322 1 012 8999999999996 79999999
Q ss_pred HHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCC
Q 016162 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMK 263 (394)
Q Consensus 184 la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk 263 (394)
| .+.|++|++++++ ..++++.+++||+|+.+++. .+++.++.+ |
T Consensus 170 L-~~~gAtVtv~~~~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~v---k 213 (276)
T 3ngx_A 170 L-LNRNYTVSVCHSK----------------------------TKDIGSMTRSSKIVVVAVGR----PGFLNREMV---T 213 (276)
T ss_dssp H-HHTTCEEEEECTT----------------------------CSCHHHHHHHSSEEEECSSC----TTCBCGGGC---C
T ss_pred H-HHCCCeEEEEeCC----------------------------cccHHHhhccCCEEEECCCC----CccccHhhc---c
Confidence 7 6899999988753 14788999999999999983 346777654 9
Q ss_pred CCcEEEEcCCCc
Q 016162 264 KEAILVNCSRGP 275 (394)
Q Consensus 264 ~gailIN~aRG~ 275 (394)
+|+++||++.-.
T Consensus 214 ~GavVIDvgi~~ 225 (276)
T 3ngx_A 214 PGSVVIDVGINY 225 (276)
T ss_dssp TTCEEEECCCEE
T ss_pred CCcEEEEeccCc
Confidence 999999998654
No 136
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.25 E-value=5.8e-06 Score=84.66 Aligned_cols=120 Identities=13% Similarity=0.128 Sum_probs=75.8
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCC--------CccccccCCHHHHhcc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLRE 236 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~ 236 (394)
..+|+|||+|.||..+|..|+ ..|.+|++||++.... +...+... .....+.. ........++++.++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la-~~G~~V~~~d~~~~~v-~~l~~~~~-~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLA-DIGHDVFCLDVDQAKI-DILNNGGV-PIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHTTCC-SSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHH-hCCCEEEEEECCHHHH-HHHHCCCC-CcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 358999999999999999984 7799999999987542 22111000 00000000 0012234578888999
Q ss_pred cCEEEEcCCCC---------hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 237 ADVISLHPVLD---------KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 237 aDiV~l~lPlt---------~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
||+|++|+|.. ......+ +.....+++++++|+.+.-.+-..+.+.+.+.+
T Consensus 85 aDvviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 85 GDVQFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999999842 2333333 445567899999999985434344555555543
No 137
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.24 E-value=2.9e-06 Score=82.83 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=69.9
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCC-------cEEEEEcCchh-----hHHHHHHHhhhhhhhh-cCC-CCccccccCCH
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQA-----TRLEKFVTAYGQFLKA-NGE-QPVTWKRASSM 230 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l 230 (394)
.++|+|||.|.||..+|..|+ ..| .+|++||++.. .. +...+ .+..... .+. .........++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~-~~g~~~~~~~~~V~~~~r~~~~~~~~~~-~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 84 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVG-GNAAQLAQFDPRVTMWVFEEDIGGKKLT-EIINT-QHENVKYLPGHKLPPNVVAVPDV 84 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HHHHHCTTEEEEEEEECCCCBSSSSBHH-HHHHH-HSCCTTTSTTCCCCTTEEEESSH
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCcccCCCCeEEEEEcChhhhhhHHH-HHHHh-cCcccccCCcccCccCeEEEcCH
Confidence 358999999999999999984 446 89999999865 21 11111 0000000 000 01112233578
Q ss_pred HHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016162 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (394)
Q Consensus 231 ~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~ 276 (394)
++.++.||+|++|+|. ..+..++ ++....+++++++|+++.|-.
T Consensus 85 ~~~~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 85 VQAAEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHHHTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HHHHcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 8889999999999994 4445544 344566789999999988754
No 138
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.24 E-value=4.3e-06 Score=78.62 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=74.5
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
++| +++|||.|.+|+.++..| ...|+ +|++++|+.++. ++. .. ........++.+.++++|+|+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L-~~~G~~~I~v~nR~~~ka-~~l--------a~----~~~~~~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYAL-LQMGVKDIWVVNRTIERA-KAL--------DF----PVKIFSLDQLDEVVKKAKSLF 171 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHH-HHTTCCCEEEEESCHHHH-HTC--------CS----SCEEEEGGGHHHHHHTCSEEE
T ss_pred CCC-eEEEECcHHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHH--------HH----HcccCCHHHHHhhhcCCCEEE
Confidence 578 999999999999999997 57898 899999987642 110 00 111123457888899999999
Q ss_pred EcCCCChhh-hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 242 LHPVLDKTT-YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 242 l~lPlt~~t-~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
.++|..-.. ...++.+. ++++.+++|+.-+ .+.-|.+|.+.|
T Consensus 172 natp~gm~p~~~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 172 NTTSVGMKGEELPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp ECSSTTTTSCCCSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred ECCCCCCCCCCCCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 999853111 12344444 4689999999988 555555666655
No 139
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.23 E-value=1.2e-06 Score=86.09 Aligned_cols=107 Identities=14% Similarity=0.168 Sum_probs=69.6
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhh-cCC-CCccccccCCHHHHhcccCEEEEcC
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGE-QPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
+|+|||+|.||..+|..| ...|.+|++||++.... +...+.. ..... .+. .........++++.++.+|+|++|+
T Consensus 17 kI~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~~~-~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav 93 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVL-SKKCREVCVWHMNEEEV-RLVNEKR-ENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 93 (366)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTEEEEEEECSCHHHH-HHHHHHT-BCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECC
T ss_pred eEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHHcC-cccccccccccccceeeeCCHHHHHcCCCEEEECC
Confidence 899999999999999998 56788999999986542 2111110 00000 000 0011223357889899999999999
Q ss_pred CCChhhhhcccHH---HHhcCCC-CcEEEEcCCCccc
Q 016162 245 VLDKTTYHLINKE---RLATMKK-EAILVNCSRGPVI 277 (394)
Q Consensus 245 Plt~~t~~li~~~---~l~~mk~-gailIN~aRG~~v 277 (394)
|. .....++... ....+++ ++++|+++.|-..
T Consensus 94 ~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 94 PT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp CH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred Ch-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 93 4555555321 4455677 8999999877443
No 140
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.20 E-value=3e-06 Score=86.79 Aligned_cols=112 Identities=14% Similarity=0.158 Sum_probs=74.9
Q ss_pred CeEEEEecChHHHHHHHHHHhcC-Cc-EEEEEcCchh----hHHHHHHHh------hhh----hhh---hcCCCCccccc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGF-KM-NLIYYDLYQA----TRLEKFVTA------YGQ----FLK---ANGEQPVTWKR 226 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~-G~-~V~~~d~~~~----~~~~~~~~~------~~~----~~~---~~~~~~~~~~~ 226 (394)
++|+|||+|.+|..+|..|+ .. |. +|++||++.. .. +...+. |-. .+. ..+. ...
T Consensus 19 mkIaVIGlG~mG~~lA~~la-~~~G~~~V~~~D~~~~~~~~kv-~~l~~g~~~i~~~e~gl~~l~~~~~~~g~----l~~ 92 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFA-DAPCFEKVLGFQRNSKSSGYKI-EMLNRGESPLKGEEPGLEELIGKVVKAGK----FEC 92 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HSTTCCEEEEECCCCTTTTTHH-HHHTTTCCCSSCCGGGHHHHHHHHHHTTC----EEE
T ss_pred CEEEEECcCHHHHHHHHHHH-HhCCCCeEEEEECChhHhHHHH-HHHHhcCCCccccCCCHHHHHHhhcccCC----eEE
Confidence 58999999999999999985 66 89 9999999876 32 111110 000 000 0111 112
Q ss_pred cCCHHHHhcccCEEEEcCCCCh--------hhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 016162 227 ASSMDEVLREADVISLHPVLDK--------TTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVE 284 (394)
Q Consensus 227 ~~~l~ell~~aDiV~l~lPlt~--------~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~ 284 (394)
..+ .+.++.||+|++|+|... +...+.. +...+.+++|.++|+.|+-.+--.+.+.+
T Consensus 93 ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 93 TPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp ESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred eCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 234 678999999999999542 2223332 45667899999999999877766677765
No 141
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.20 E-value=4.6e-06 Score=84.26 Aligned_cols=111 Identities=19% Similarity=0.230 Sum_probs=74.8
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHH---------
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV--------- 233 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el--------- 233 (394)
-+|+++.|||+|.+|..+|..|+ ..|.+|++||+++++.. .. .. +..+. ....++|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La-~~G~~V~~~D~~~~kv~-~L--------~~-g~~pi---~epgl~~ll~~~~~~g~ 74 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFA-KHGVDVLGVDINQQTID-KL--------QN-GQISI---EEPGLQEVYEEVLSSGK 74 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHHH-HH--------HT-TCCSS---CCTTHHHHHHHHHHTTC
T ss_pred ccCCccEEEeeCHHHHHHHHHHH-HCCCEEEEEECCHHHHH-HH--------HC-CCCCc---CCCCHHHHHHhhcccCc
Confidence 47899999999999999999984 67999999999986532 11 11 11111 01122322
Q ss_pred ------hcccCEEEEcCCCChhh--------hhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 016162 234 ------LREADVISLHPVLDKTT--------YHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (394)
Q Consensus 234 ------l~~aDiV~l~lPlt~~t--------~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 287 (394)
++.||+|++|+|..... ..+.. +...+.+++|.++|+.|+-.+--.+.+.+.+.
T Consensus 75 l~~ttd~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~ 144 (431)
T 3ojo_A 75 LKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVI 144 (431)
T ss_dssp EEEESSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHH
T ss_pred eEEeCchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHH
Confidence 35799999999954321 12332 45667899999999999887777777777543
No 142
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.19 E-value=2.1e-05 Score=76.45 Aligned_cols=150 Identities=13% Similarity=0.102 Sum_probs=95.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHH--HHHHhhhhhhhhcCCCCc---------cccccCCHHH
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFVTAYGQFLKANGEQPV---------TWKRASSMDE 232 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~l~e 232 (394)
.-++|+|||.|.||+.+|..+ ...|++|+.||+.+..... +..+.....+...+.... ......++++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~-a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLF-ASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHH-HHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCeEEEECCcHHHHHHHHHH-HhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 346899999999999999997 4779999999998764221 111111111222222110 1123468999
Q ss_pred HhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccC
Q 016162 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEM 312 (394)
Q Consensus 233 ll~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~ 312 (394)
.++.||+|+=++|-+-+.+.-+-++.=+.++++++|-.-+++ +....|.+++.. .-+..++-.|.+-|+ -||.+
T Consensus 84 a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP~~~--m~LVE- 157 (319)
T 3ado_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNPPYY--IPLVE- 157 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSSTTT--CCEEE-
T ss_pred HhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCCccc--cchHH-
Confidence 999999999999987777665556666778999998554443 445667766653 345667666643222 34444
Q ss_pred CceEEcCCCC
Q 016162 313 KNAIVVPHIA 322 (394)
Q Consensus 313 ~nvilTPHia 322 (394)
|+-+|+.+
T Consensus 158 --iv~g~~Ts 165 (319)
T 3ado_A 158 --LVPHPETS 165 (319)
T ss_dssp --EEECTTCC
T ss_pred --hcCCCCCc
Confidence 66666543
No 143
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.17 E-value=2.2e-06 Score=73.18 Aligned_cols=104 Identities=12% Similarity=0.124 Sum_probs=73.7
Q ss_pred ccCCCeEEEEec----ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl----G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
-++-++|+|||. |++|..+++.| ...|.+|+.+||..... . +...+.|++|+....
T Consensus 11 l~~p~~IavIGaS~~~g~~G~~~~~~L-~~~G~~V~~vnp~~~~i-----------------~--G~~~~~s~~el~~~v 70 (138)
T 1y81_A 11 SKEFRKIALVGASKNPAKYGNIILKDL-LSKGFEVLPVNPNYDEI-----------------E--GLKCYRSVRELPKDV 70 (138)
T ss_dssp ---CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSEE-----------------T--TEECBSSGGGSCTTC
T ss_pred ccCCCeEEEEeecCCCCCHHHHHHHHH-HHCCCEEEEeCCCCCeE-----------------C--CeeecCCHHHhCCCC
Confidence 356679999999 99999999998 67899998888864220 1 122356888988899
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
|++++++| .+....++. +..+ ...++++++.+. ..+++.+++++..+.
T Consensus 71 Dlvii~vp-~~~v~~v~~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 71 DVIVFVVP-PKVGLQVAK-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp CEEEECSC-HHHHHHHHH-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred CEEEEEeC-HHHHHHHHH-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 99999999 466666663 3444 566777777743 257777777765444
No 144
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.16 E-value=1e-05 Score=77.78 Aligned_cols=114 Identities=15% Similarity=0.144 Sum_probs=75.0
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
++.|++++|||.|.+|+.++..| ...|+ +|++++|+.++. ++..+.+ +..........++.+.+.++|+|
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L-~~~G~~~V~v~nR~~~ka-~~la~~~-------~~~~~~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSL-LSTAAERIDMANRTVEKA-ERLVREG-------DERRSAYFSLAEAETRLAEYDII 208 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECSSHHHH-HHHHHHS-------CSSSCCEECHHHHHHTGGGCSEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHh-------hhccCceeeHHHHHhhhccCCEE
Confidence 57899999999999999999998 68898 999999987542 2222211 11000111113566778999999
Q ss_pred EEcCCCChhhh--h-cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 241 SLHPVLDKTTY--H-LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 241 ~l~lPlt~~t~--~-li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
+.++|...... . .++ .+.++++.+++|++.. +..+. |+++.++.
T Consensus 209 In~t~~~~~~~~~~~~i~---~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~ 255 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLS---LERLRPGVIVSDIIYN-PLETK-WLKEAKAR 255 (297)
T ss_dssp EECSCTTCSSCCSCCSSC---CTTCCTTCEEEECCCS-SSSCH-HHHHHHHT
T ss_pred EECCCCCCCCCCCCCCCC---HHHcCCCCEEEEcCCC-CCCCH-HHHHHHHC
Confidence 99999654211 0 122 2457889999999884 33443 65555543
No 145
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.15 E-value=3.1e-06 Score=77.53 Aligned_cols=93 Identities=22% Similarity=0.233 Sum_probs=61.6
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEE-EcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
-++|+|||+|+||+.+|+.| ...|.+|++ +||+.+.. +...+.+ +. ....+..+.++.+|+|+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l-~~~g~~V~~v~~r~~~~~-~~l~~~~-------g~-----~~~~~~~~~~~~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERF-TAAQIPAIIANSRGPASL-SSVTDRF-------GA-----SVKAVELKDALQADVVILA 88 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHH-HHTTCCEEEECTTCGGGG-HHHHHHH-------TT-----TEEECCHHHHTTSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEECCCHHHH-HHHHHHh-------CC-----CcccChHHHHhcCCEEEEe
Confidence 36899999999999999998 567889998 99987643 2222222 11 1112444568999999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
+|. .....++.+ +.. .++.++|+++-|-
T Consensus 89 vp~-~~~~~v~~~--l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 89 VPY-DSIADIVTQ--VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp SCG-GGHHHHHTT--CSC-CTTCEEEECCCCB
T ss_pred CCh-HHHHHHHHH--hhc-cCCCEEEEcCCCC
Confidence 993 233333321 222 3588999998654
No 146
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.14 E-value=3.9e-06 Score=82.91 Aligned_cols=105 Identities=12% Similarity=0.128 Sum_probs=67.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCC-------cEEEEEcCchh-----hHHHHHHHhhhhhhhh-cCC-CCccccccCCHH
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQA-----TRLEKFVTAYGQFLKA-NGE-QPVTWKRASSMD 231 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~ 231 (394)
++|+|||.|.||..+|..|+ ..| .+|++||++.. .. +...+. ...... .+. ...+.....+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~-~~G~~~~~~~~~V~~~~r~~~~~~~~~~-~~l~~~-~~~~~~~~~~~~~~~i~~~~~~~ 98 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVG-TNAKNNYLFENEVRMWIRDEFVNGERMV-DIINNK-HENTKYLKGVPLPHNIVAHSDLA 98 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHH-HHHHHCTTBCSCEEEECCSCC---CCHH-HHHHHH-CBCTTTSTTCBCCTTEEEESSTH
T ss_pred CEEEEECcCHHHHHHHHHHH-HcCCccCCCCCeEEEEECChhhhhHHHH-HHHHhc-CcccccCCcccCcCCeEEECCHH
Confidence 47999999999999999985 445 88999999765 21 111110 000000 000 011122345788
Q ss_pred HHhcccCEEEEcCCCChhhhhcccHHHHh----cCCCCcEEEEcCCCc
Q 016162 232 EVLREADVISLHPVLDKTTYHLINKERLA----TMKKEAILVNCSRGP 275 (394)
Q Consensus 232 ell~~aDiV~l~lPlt~~t~~li~~~~l~----~mk~gailIN~aRG~ 275 (394)
+.++.+|+|++++| +.....++ ++... .+++++++|+++.|-
T Consensus 99 ea~~~aDvVilav~-~~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 99 SVINDADLLIFIVP-CQYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HHHTTCSEEEECCC-HHHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred HHHcCCCEEEEcCC-HHHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 88999999999999 34555544 23444 688899999998873
No 147
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.14 E-value=5.3e-06 Score=76.71 Aligned_cols=96 Identities=24% Similarity=0.260 Sum_probs=71.2
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh-cccCEEEEcC
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~l 244 (394)
+|||||+|.||+.+++.+. .-|+++ .+||++... + . .+.++++++ .++|+|++|+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~--~--------------~------~~~~~~~l~~~~~DvVv~~~ 58 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEH--E--------------K------MVRGIDEFLQREMDVAVEAA 58 (236)
T ss_dssp EEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCC--T--------------T------EESSHHHHTTSCCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcch--h--------------h------hcCCHHHHhcCCCCEEEECC
Confidence 7999999999999999974 678887 689987421 0 0 246899999 7999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde---~aL~~aL~~g~ 290 (394)
|.... . +-....++.|..+|+.+.+..-++ +.|.++.++..
T Consensus 59 ~~~~~-~----~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g 102 (236)
T 2dc1_A 59 SQQAV-K----DYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTG 102 (236)
T ss_dssp CHHHH-H----HHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHC
T ss_pred CHHHH-H----HHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcC
Confidence 93221 1 222455678999999998887666 66777776543
No 148
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.13 E-value=4.6e-06 Score=81.09 Aligned_cols=106 Identities=17% Similarity=0.300 Sum_probs=69.4
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCC------ccccccCCHHHHhcccC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP------VTWKRASSMDEVLREAD 238 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~ell~~aD 238 (394)
..+|+|||.|.||..+|..| ..-|.+|++|+|+.... +... ..+... .......++++ +..+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L-~~~G~~V~~~~r~~~~~-~~l~--------~~g~~~~~~~~~~~~~~~~~~~~-~~~aD 82 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQML-HENGEEVILWARRKEIV-DLIN--------VSHTSPYVEESKITVRATNDLEE-IKKED 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHH-HHHH--------HHSCBTTBTTCCCCSEEESCGGG-CCTTE
T ss_pred CCcEEEECcCHHHHHHHHHH-HhCCCeEEEEeCCHHHH-HHHH--------HhCCcccCCCCeeeEEEeCCHHH-hcCCC
Confidence 45899999999999999998 46689999999986542 2111 111100 01223457778 89999
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCC-CCcEEEEcCCCcccC-HHHHHHHHH
Q 016162 239 VISLHPVLDKTTYHLINKERLATMK-KEAILVNCSRGPVID-EVALVEHLK 287 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk-~gailIN~aRG~~vd-e~aL~~aL~ 287 (394)
+|++++| +..+..++ ..++ ++.++|+++.|--.+ .+.+.+.+.
T Consensus 83 vVil~vk-~~~~~~v~-----~~l~~~~~~vv~~~nGi~~~~~~~l~~~~~ 127 (335)
T 1z82_A 83 ILVIAIP-VQYIREHL-----LRLPVKPSMVLNLSKGIEIKTGKRVSEIVE 127 (335)
T ss_dssp EEEECSC-GGGHHHHH-----TTCSSCCSEEEECCCCCCTTTCCCHHHHHH
T ss_pred EEEEECC-HHHHHHHH-----HHhCcCCCEEEEEeCCCCCCccCcHHHHHH
Confidence 9999999 35555444 2333 789999999763322 233444443
No 149
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.12 E-value=2.9e-06 Score=79.95 Aligned_cols=97 Identities=10% Similarity=0.069 Sum_probs=65.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cc-cccCCHHHHhcccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TW-KRASSMDEVLREADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~ell~~aDiV~l 242 (394)
++|+|||+|.||+.+|..| ...|.+|++|||+.... +. +...+..+. .. ....+ .+.++.+|+|++
T Consensus 1 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~r~~~~~-~~--------l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~ 69 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTAL-CKQGHEVQGWLRVPQPY-CS--------VNLVETDGSIFNESLTAND-PDFLATSDLLLV 69 (291)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSCCSE-EE--------EEEECTTSCEEEEEEEESC-HHHHHTCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHH-HhCCCCEEEEEcCccce-ee--------EEEEcCCCceeeeeeeecC-ccccCCCCEEEE
Confidence 3799999999999999998 56789999999986431 10 111111110 00 01234 466789999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
++|.. .+..++ ++....+++++++|++..|-
T Consensus 70 ~v~~~-~~~~v~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 70 TLKAW-QVSDAV-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp CSCGG-GHHHHH-HHHHTTSCTTSCEEEECSSS
T ss_pred EecHH-hHHHHH-HHHHhhCCCCCEEEEecCCC
Confidence 99954 455554 45556788999999987653
No 150
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.11 E-value=1.6e-05 Score=77.05 Aligned_cols=97 Identities=19% Similarity=0.297 Sum_probs=67.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCC-cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
..++++|||.|.+|+.+++.++..++ -+|.+|||+ .. +++.+.+.. ..| ..+... ++++.+++||+|++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a--~~la~~l~~---~~g---~~~~~~-~~~eav~~aDIVi~ 189 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-AS--PEILERIGR---RCG---VPARMA-APADIAAQADIVVT 189 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CC--HHHHHHHHH---HHT---SCEEEC-CHHHHHHHCSEEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HH--HHHHHHHHH---hcC---CeEEEe-CHHHHHhhCCEEEE
Confidence 46799999999999999998754444 489999999 22 222221110 012 112234 89999999999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~ 276 (394)
|+|.. ..++.. ..+++|+.+++++....
T Consensus 190 aT~s~---~pvl~~---~~l~~G~~V~~vGs~~p 217 (313)
T 3hdj_A 190 ATRST---TPLFAG---QALRAGAFVGAIGSSLP 217 (313)
T ss_dssp CCCCS---SCSSCG---GGCCTTCEEEECCCSST
T ss_pred ccCCC---CcccCH---HHcCCCcEEEECCCCCC
Confidence 99853 455653 35799999999987543
No 151
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.11 E-value=8.1e-06 Score=75.77 Aligned_cols=70 Identities=10% Similarity=0.142 Sum_probs=55.6
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
-.+|||||+|+||.++|+.| +..|.+|++||+. ++ +..|| ++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L-~~~G~~V~~~~~~--------------------------------~~-~~~aD--ilav 49 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKL-DSVGHYVTVLHAP--------------------------------ED-IRDFE--LVVI 49 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHH-HHTTCEEEECSSG--------------------------------GG-GGGCS--EEEE
T ss_pred CcEEEEEeeCHHHHHHHHHH-HHCCCEEEEecCH--------------------------------HH-hccCC--EEEE
Confidence 35899999999999999998 6779999999872 01 46789 8888
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
|.. ....++ .+....+++|+++++++
T Consensus 50 P~~-ai~~vl-~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 50 DAH-GVEGYV-EKLSAFARRGQMFLHTS 75 (232)
T ss_dssp CSS-CHHHHH-HHHHTTCCTTCEEEECC
T ss_pred cHH-HHHHHH-HHHHHhcCCCCEEEEEC
Confidence 864 555555 45666789999999985
No 152
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.09 E-value=1.5e-05 Score=78.33 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=69.7
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCC-cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
..++++|||.|.+|+.+++.+....+ -+|.+|||+.+.. +++.+.+. .. .+.....+.++++++++||+|++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a-~~la~~~~----~~--~g~~~~~~~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLAT-AKLIANLK----EY--SGLTIRRASSVAEAVKGVDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHH-HHHHHHHT----TC--TTCEEEECSSHHHHHTTCSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHH-HHHHHHHH----hc--cCceEEEeCCHHHHHhcCCEEEE
Confidence 46799999999999999987644444 5899999997653 33333221 10 01112335689999999999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
|+|.. ....++.. +.+++|..+++++..
T Consensus 201 aTps~-~~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 201 VTADK-AYATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp CCCCS-SEEEEECG---GGCCTTCEEEECSCC
T ss_pred eccCC-CCCceecH---HHcCCCCEEEECCCC
Confidence 99965 23345543 457899999999853
No 153
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.08 E-value=3.7e-06 Score=74.31 Aligned_cols=100 Identities=11% Similarity=0.131 Sum_probs=64.9
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHH--h
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV--L 234 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el--l 234 (394)
.++.+++++|+|+|.+|+.+|+.| ... |.+|+++|+++..... +...|.... .....+ +.++ +
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L-~~~~g~~V~vid~~~~~~~~---------~~~~g~~~~-~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDEL-RARYGKISLGIEIREEAAQQ---------HRSEGRNVI-SGDATDPDFWERILDT 103 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHH-HHHHCSCEEEEESCHHHHHH---------HHHTTCCEE-ECCTTCHHHHHTBCSC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHH-HhccCCeEEEEECCHHHHHH---------HHHCCCCEE-EcCCCCHHHHHhccCC
Confidence 457788999999999999999998 677 9999999998754321 112222111 111123 3343 6
Q ss_pred cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 235 ~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.++|+|++++|....+..++ ..+..+.+...+|..++
T Consensus 104 ~~ad~vi~~~~~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 104 GHVKLVLLAMPHHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CCCCEEEECCSSHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred CCCCEEEEeCCChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 78999999999644444332 34555666666665443
No 154
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.08 E-value=5.7e-06 Score=78.75 Aligned_cols=117 Identities=18% Similarity=0.190 Sum_probs=70.9
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCC-CCccccccCCHHHHhc---ccCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVLR---EADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ell~---~aDiV~ 241 (394)
++|+|||.|.||+.+|..| ...|.+|++||++.... +...+. +......+. ..... ...+.+++.. .+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~r~~~~~-~~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIML-HQGGNDVTLIDQWPAHI-EAIRKN-GLIADFNGEEVVANL-PIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHH-HHHHHH-CEEEEETTEEEEECC-CEECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHH-HhCCCcEEEEECCHHHH-HHHHhC-CEEEEeCCCeeEecc-eeecchhhcccCCCCCEEE
Confidence 4899999999999999998 56789999999987542 211110 000000000 00000 0113334444 899999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 289 (394)
+|+|. ..+..++ ++....+++++++|+++.|- -..+.+.+.+.+.
T Consensus 80 ~~v~~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~ 124 (316)
T 2ew2_A 80 ALTKA-QQLDAMF-KAIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKE 124 (316)
T ss_dssp ECSCH-HHHHHHH-HHHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGG
T ss_pred EEecc-ccHHHHH-HHHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCc
Confidence 99993 4455544 34556788999999998753 2345565555443
No 155
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.02 E-value=3.1e-06 Score=72.85 Aligned_cols=105 Identities=10% Similarity=0.164 Sum_probs=73.8
Q ss_pred CCeEEEEec----ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 165 gktvGIIGl----G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
-++|+|||+ |++|..+++.| ...|++|+.+||..... . . .+...+.+++|+....|++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L-~~~G~~v~~vnp~~~g~--~-------------i--~G~~~~~sl~el~~~~Dlv 74 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYL-LDQGYHVIPVSPKVAGK--T-------------L--LGQQGYATLADVPEKVDMV 74 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHH-HHHTCCEEEECSSSTTS--E-------------E--TTEECCSSTTTCSSCCSEE
T ss_pred CCEEEEECcCCCCCChHHHHHHHH-HHCCCEEEEeCCccccc--c-------------c--CCeeccCCHHHcCCCCCEE
Confidence 578999999 89999999998 67788899888865200 0 0 1122346788888899999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
++++| .+....++. +..+ ...++++++.+. . ++++.+++++..+.-.
T Consensus 75 ii~vp-~~~v~~v~~-~~~~-~g~~~i~i~~~~--~--~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 75 DVFRN-SEAAWGVAQ-EAIA-IGAKTLWLQLGV--I--NEQAAVLAREAGLSVV 121 (145)
T ss_dssp ECCSC-STHHHHHHH-HHHH-HTCCEEECCTTC--C--CHHHHHHHHTTTCEEE
T ss_pred EEEeC-HHHHHHHHH-HHHH-cCCCEEEEcCCh--H--HHHHHHHHHHcCCEEE
Confidence 99999 466666663 3333 456777777532 2 6778888887655443
No 156
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.01 E-value=5.1e-06 Score=82.18 Aligned_cols=114 Identities=16% Similarity=0.081 Sum_probs=72.4
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
+=++++|+|||+|.||+.+|+.|+ .. .+|.++||+.++..+ ..+.+ +..........+++++++++|+|+
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~-~~-~~V~V~~R~~~~a~~-la~~~-------~~~~~d~~~~~~l~~ll~~~DvVI 82 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLK-DE-FDVYIGDVNNENLEK-VKEFA-------TPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT-TT-SEEEEEESCHHHHHH-HTTTS-------EEEECCTTCHHHHHHHHTTCSCEE
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHH-cC-CeEEEEECCHHHHHH-HHhhC-------CeEEEecCCHHHHHHHHhCCCEEE
Confidence 456889999999999999999985 44 899999998765321 11110 000001112246788999999999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
+|+|..-. .. + ..+.++.|..+++++.- .-+..+|.+..++..+
T Consensus 83 n~~P~~~~-~~-v---~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~ 126 (365)
T 2z2v_A 83 GALPGFLG-FK-S---IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQV 126 (365)
T ss_dssp ECCCHHHH-HH-H---HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTC
T ss_pred ECCChhhh-HH-H---HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCC
Confidence 99983321 11 1 23456789999998852 3444567776665543
No 157
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.94 E-value=4e-05 Score=75.97 Aligned_cols=160 Identities=15% Similarity=0.211 Sum_probs=101.8
Q ss_pred ccccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCc----hhhH---HHHHHHhhhhhhhhcCCCCccccccCCHH
Q 016162 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY----QATR---LEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (394)
Q Consensus 160 g~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (394)
|..+.+.+|.|+|.|..|..+|+.+ .+.|. +|+.+|++ .... +..+.+.|... .+. .....+|+
T Consensus 187 g~~l~~~kVVv~GAGaAG~~iAkll-~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~---~~~----~~~~~~L~ 258 (388)
T 1vl6_A 187 EKKIEEVKVVVNGIGAAGYNIVKFL-LDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARI---TNP----ERLSGDLE 258 (388)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHT---SCT----TCCCSCHH
T ss_pred CCCCCCcEEEEECCCHHHHHHHHHH-HhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHh---hhc----cCchhhHH
Confidence 3478999999999999999999997 68899 89999998 3221 22233333321 111 11246899
Q ss_pred HHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCC-cceEEeeccCCCCCCCCcc
Q 016162 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNP-MFRVGLDVFEDEPYMKPGL 309 (394)
Q Consensus 232 ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~-l~gaalDV~~~EP~~~~~L 309 (394)
|.+..+|+++-+.- .++|.++.++.|+++++++.+|+... +..++.+++ |+ +.+-+ -+..|
T Consensus 259 eav~~ADVlIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~~a~~~---g~~i~atG---r~~~p------ 321 (388)
T 1vl6_A 259 TALEGADFFIGVSR-----GNILKPEWIKKMSRKPVIFALANPVPEIDPELAREA---GAFIVATG---RSDHP------ 321 (388)
T ss_dssp HHHTTCSEEEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSCSSCHHHHHHT---TCSEEEES---CTTSS------
T ss_pred HHHccCCEEEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCCCCCHHHHHHh---cCeEEEeC---CCCCC------
Confidence 99999999987742 38999999999999999999998553 333333333 54 22222 11222
Q ss_pred ccCCceEEcCCCCCCcHH----HHHHHHHHHHHHHHHHH
Q 016162 310 SEMKNAIVVPHIASASKW----TREGMATLAALNVLGKI 344 (394)
Q Consensus 310 ~~~~nvilTPHia~~t~~----~~~~~~~~~~~ni~~~l 344 (394)
-+-.|+++-|=++-.... --+.|...+++.+-.+.
T Consensus 322 ~Q~NN~~~FPgi~~Gal~~~a~i~~~m~~aAa~alA~~~ 360 (388)
T 1vl6_A 322 NQVNNLLAFPGIMKGAVEKRSKITKNMLLSAVEAIARSC 360 (388)
T ss_dssp SBCCGGGTHHHHHHHHHHHCSCCCHHHHHHHHHHHHHTS
T ss_pred CcCCceeEcchHhHHHHhcCCccCHHHHHHHHHHHHhhh
Confidence 234567776655321111 12455555555555544
No 158
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.92 E-value=3e-06 Score=80.21 Aligned_cols=89 Identities=13% Similarity=0.181 Sum_probs=55.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.+|||||+|+||+.+++.++ .. .+| .+||++..... ...+.+ +. ...+++++++++|+|++|+
T Consensus 3 m~I~iIG~G~mG~~la~~l~-~~-~~v~~v~~~~~~~~~-~~~~~~-------g~------~~~~~~~~~~~~DvVilav 66 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLK-DR-YEIGYILSRSIDRAR-NLAEVY-------GG------KAATLEKHPELNGVVFVIV 66 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC------CCCEECSSHHHHH-HHHHHT-------CC------CCCSSCCCCC---CEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHH-Hc-CcEEEEEeCCHHHHH-HHHHHc-------CC------ccCCHHHHHhcCCEEEEeC
Confidence 47999999999999999874 44 788 58999875422 211111 21 2346677788999999999
Q ss_pred CCChhhhhcccHHHHhcC-CCCcEEEEcCCCcc
Q 016162 245 VLDKTTYHLINKERLATM-KKEAILVNCSRGPV 276 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~m-k~gailIN~aRG~~ 276 (394)
|... . .+.+..+ +++.++||++-+-.
T Consensus 67 ~~~~-~-----~~v~~~l~~~~~ivi~~s~~~~ 93 (276)
T 2i76_A 67 PDRY-I-----KTVANHLNLGDAVLVHCSGFLS 93 (276)
T ss_dssp CTTT-H-----HHHHTTTCCSSCCEEECCSSSC
T ss_pred ChHH-H-----HHHHHHhccCCCEEEECCCCCc
Confidence 9543 2 2333333 68899999986543
No 159
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.92 E-value=6.6e-05 Score=64.45 Aligned_cols=104 Identities=17% Similarity=0.207 Sum_probs=62.2
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhh-hcCCCCccccccCCH---HHH-
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGEQPVTWKRASSM---DEV- 233 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l---~el- 233 (394)
+.....++++.|+|+|.+|+.+++.| +..|.+|+++|+++... +. +. ..+.... .....+. .+.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L-~~~g~~V~vid~~~~~~-~~--------~~~~~g~~~~-~~d~~~~~~l~~~~ 81 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLA-SSSGHSVVVVDKNEYAF-HR--------LNSEFSGFTV-VGDAAEFETLKECG 81 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGG-GG--------SCTTCCSEEE-ESCTTSHHHHHTTT
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HH--------HHhcCCCcEE-EecCCCHHHHHHcC
Confidence 34567889999999999999999997 68899999999987542 11 11 1121100 0111222 222
Q ss_pred hcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 234 l~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
+..+|+|++++|...... . -......+.+...+|-..++.
T Consensus 82 ~~~ad~Vi~~~~~~~~~~-~-~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 82 MEKADMVFAFTNDDSTNF-F-ISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp GGGCSEEEECSSCHHHHH-H-HHHHHHHTSCCSEEEEECSSG
T ss_pred cccCCEEEEEeCCcHHHH-H-HHHHHHHHCCCCeEEEEECCH
Confidence 678999999998433222 2 123444445556666665554
No 160
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.90 E-value=6.5e-05 Score=62.38 Aligned_cols=95 Identities=11% Similarity=0.172 Sum_probs=57.8
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHH----hcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~~aDiV 240 (394)
+++++|+|+|.+|+.+|+.| ...|.+|+++|++.... +...+.+ +.... .....+.+.+ +.++|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L-~~~g~~v~~~d~~~~~~-~~~~~~~-------~~~~~-~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSL-SEKGHDIVLIDIDKDIC-KKASAEI-------DALVI-NGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHHHC-------SSEEE-ESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HHHHHhc-------CcEEE-EcCCCCHHHHHHcCcccCCEE
Confidence 56899999999999999998 57799999999986542 2211111 11000 0011233322 5789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~ 271 (394)
++++|...... .-......++++.+++-+
T Consensus 74 i~~~~~~~~~~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 74 IAVTGKEEVNL--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp EECCSCHHHHH--HHHHHHHHTTCCCEEEEC
T ss_pred EEeeCCchHHH--HHHHHHHHcCCCEEEEEe
Confidence 99998533222 223345557777666544
No 161
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.89 E-value=5e-05 Score=73.71 Aligned_cols=95 Identities=15% Similarity=0.217 Sum_probs=67.3
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCC-cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
..++++|||.|.+|+.+++.++...+ -+|.+|||++++. +++.+.+.. .+ .... +.++++++ ++|+|++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a-~~la~~~~~----~~---~~~~-~~~~~e~v-~aDvVi~ 193 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAA-KKFVSYCED----RG---ISAS-VQPAEEAS-RCDVLVT 193 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHH-HHHHHHHHH----TT---CCEE-ECCHHHHT-SSSEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHH-HHHHHHHHh----cC---ceEE-ECCHHHHh-CCCEEEE
Confidence 46799999999999999998754343 5899999997653 333333321 11 1123 56899999 9999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
|+|.. ..++.. ..+++|..+++++..
T Consensus 194 aTp~~---~pv~~~---~~l~~G~~V~~ig~~ 219 (322)
T 1omo_A 194 TTPSR---KPVVKA---EWVEEGTHINAIGAD 219 (322)
T ss_dssp CCCCS---SCCBCG---GGCCTTCEEEECSCC
T ss_pred eeCCC---CceecH---HHcCCCeEEEECCCC
Confidence 99953 345543 457899999999643
No 162
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.86 E-value=3e-05 Score=73.51 Aligned_cols=94 Identities=17% Similarity=0.061 Sum_probs=61.1
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
|+++.|||.|.+|+.++..| ...|.+|++++|+.++..+ .. .+ + .... ++++ +.++|+|+.++
T Consensus 118 ~k~vlvlGaGGaaraia~~L-~~~G~~v~V~nRt~~ka~~-la-~~-------~---~~~~---~~~~-l~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGAGGSAKALACEL-KKQGLQVSVLNRSSRGLDF-FQ-RL-------G---CDCF---MEPP-KSAFDLIINAT 180 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSCTTHHH-HH-HH-------T---CEEE---SSCC-SSCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-HH-HC-------C---CeEe---cHHH-hccCCEEEEcc
Confidence 88999999999999999998 5788999999999865322 11 11 1 1111 2223 23899999999
Q ss_pred CCChhhhhcccHHHHh-cCCCCcEEEEcCCCc
Q 016162 245 VLDKTTYHLINKERLA-TMKKEAILVNCSRGP 275 (394)
Q Consensus 245 Plt~~t~~li~~~~l~-~mk~gailIN~aRG~ 275 (394)
|..-.....++.+.+. .++++.+++|+....
T Consensus 181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 181 SASLHNELPLNKEVLKGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp TTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS
T ss_pred cCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC
Confidence 9653222234444222 455666777766654
No 163
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.84 E-value=2e-05 Score=76.69 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=65.5
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhc-CCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN-GEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.++|+|||.|.||..+|..| ...|.+|.+|+|.. ..+...+ .+-..... +..........++++ +..+|+|++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L-~~~g~~V~~~~r~~--~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARL-ALAGEAINVLARGA--TLQALQT-AGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHH-HHTTCCEEEECCHH--HHHHHHH-TCEEEEETTEEEEECCEEESCHHH-HCCCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEChH--HHHHHHH-CCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEe
Confidence 36899999999999999998 46688999999852 2222111 10000000 000001112346776 5899999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
+|. ..+..++ +..-..+++++++|.+..|
T Consensus 78 vk~-~~~~~~~-~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 78 VKA-PALESVA-AGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp CCH-HHHHHHH-GGGSSSCCTTCEEEECCSS
T ss_pred CCc-hhHHHHH-HHHHhhCCCCCEEEEECCC
Confidence 994 4555444 2334557889999999988
No 164
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.83 E-value=1.5e-05 Score=79.33 Aligned_cols=83 Identities=27% Similarity=0.432 Sum_probs=68.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCc---EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
...+|.|||. |+.|+..++.+ +++|+ .|.++|++...+ |. .+ +.+.++|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a-~~lGa~~~~V~v~D~~~~~~---------------g~---------~~-~~i~~aDi 266 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLL-HKVGIPDANILKWDIKETSR---------------GG---------PF-DEIPQADI 266 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHH-HHTTCCGGGEEEECHHHHTT---------------CS---------CC-THHHHSSE
T ss_pred CCCeEEEEcCCCHHHHHHHHHH-HhCCCCcCceEEeecccccc---------------CC---------ch-hhHhhCCE
Confidence 4668999999 99999999985 89998 899999865221 11 11 34669999
Q ss_pred EEEcCCCChhhhhcccHHHHhcC-CCCcEEEEcC
Q 016162 240 ISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~m-k~gailIN~a 272 (394)
|+.|+......-.+|.++.++.| |||++|||+|
T Consensus 267 vIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 267 FINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp EEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred EEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 99999987777789999999999 9999999996
No 165
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.81 E-value=6.9e-05 Score=75.15 Aligned_cols=100 Identities=20% Similarity=0.265 Sum_probs=70.6
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhH--HHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATR--LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
.-|+||||+|||||+-|.+=|..| +--|.+|++--|..... ...+. .....| + ...+++|++++||
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNL-RDSGv~V~Vglr~~s~~e~~~S~~-----~A~~~G-----f-~v~~~~eA~~~AD 100 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNM-RDSGLDISYALRKEAIAEKRASWR-----KATENG-----F-KVGTYEELIPQAD 100 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHH-HHTTCEEEEEECHHHHHTTCHHHH-----HHHHTT-----C-EEEEHHHHGGGCS
T ss_pred HHHcCCEEEEeCCChHhHHHHhHH-HhcCCcEEEEeCCCCcccccchHH-----HHHHCC-----C-EecCHHHHHHhCC
Confidence 358999999999999999999998 78899988765422100 00000 011122 2 2358999999999
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
+|.+.+|.. ....++ ++....||+|+.|. .|+|=
T Consensus 101 vV~~L~PD~-~q~~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 101 LVINLTPDK-QHSDVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp EEEECSCGG-GHHHHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred EEEEeCChh-hHHHHH-HHHHhhCCCCCEEE-ecCcc
Confidence 999999954 334445 46889999999887 67765
No 166
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.79 E-value=2.6e-05 Score=74.51 Aligned_cols=116 Identities=14% Similarity=0.088 Sum_probs=68.2
Q ss_pred CeEEEEecChHHHHHHHHHHhcC-----C-cEEEEEcCchhhHHHHHHHhhhhhhhh-cCC-CCccccccCCHHHHhccc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGF-----K-MNLIYYDLYQATRLEKFVTAYGQFLKA-NGE-QPVTWKRASSMDEVLREA 237 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~-----G-~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~ell~~a 237 (394)
++|+|||+|.||..+|..|+ .. | .+|++|+| .. ..+...+..+-.... .+. .........+. +.+..+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~-~~~~~~~g~~~V~~~~r-~~-~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 84 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLA-LRAAATDGLLEVSWIAR-GA-HLEAIRAAGGLRVVTPSRDFLARPTCVTDNP-AEVGTV 84 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HHHHHTTSSEEEEEECC-HH-HHHHHHHHTSEEEECSSCEEEECCSEEESCH-HHHCCE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCccccCCCCCEEEEEc-HH-HHHHHHhcCCeEEEeCCCCeEEecceEecCc-cccCCC
Confidence 48999999999999999985 44 7 89999998 43 222221101100000 000 00000011233 457899
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 288 (394)
|+|++|+|... +..++ +.....++++.++|++..| +-.++.|.+.+.+
T Consensus 85 D~vil~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~ 132 (317)
T 2qyt_A 85 DYILFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPD 132 (317)
T ss_dssp EEEEECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCT
T ss_pred CEEEEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCC
Confidence 99999999543 44444 3344556788999999776 2223555555543
No 167
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.78 E-value=6.7e-05 Score=63.44 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=60.8
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHH---HH-hcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD---EV-LREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---el-l~~aDiV 240 (394)
..++.|+|+|.+|+.+|+.| +..|.+|+++|+++..... ++..|.... .....+.+ ++ +.++|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~~~---------~~~~g~~~i-~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKL-LASDIPLVVIETSRTRVDE---------LRERGVRAV-LGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHHHH---------HHHTTCEEE-ESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHH-HHCCCCEEEEECCHHHHHH---------HHHcCCCEE-ECCCCCHHHHHhcCcccCCEE
Confidence 34799999999999999998 6889999999998765321 111222111 11112322 22 5789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
++++|.+..+..++ ..+..+.++..+|--++
T Consensus 76 i~~~~~~~~n~~~~--~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 76 ILTIPNGYEAGEIV--ASARAKNPDIEIIARAH 106 (140)
T ss_dssp EECCSCHHHHHHHH--HHHHHHCSSSEEEEEES
T ss_pred EEECCChHHHHHHH--HHHHHHCCCCeEEEEEC
Confidence 99999655554332 34455556666665433
No 168
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.77 E-value=4.5e-05 Score=73.60 Aligned_cols=119 Identities=16% Similarity=0.137 Sum_probs=74.4
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhh--cCCCCc-cccccCCHHHHhcccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA--NGEQPV-TWKRASSMDEVLREADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~ell~~aDiV~l 242 (394)
++|+|||.|.||..+|..| ...|.+|.+++|....... + .+-.... .+.... ......+++++...+|+|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L-~~~g~~V~~~~r~~~~~i~---~-~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALL-AKTGHCVSVVSRSDYETVK---A-KGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHH-HHTTCEEEEECSTTHHHHH---H-HCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHH-HhCCCeEEEEeCChHHHHH---h-CCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 5899999999999999998 4668999999997532111 1 0000000 111000 01123466776668999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
++|... +...+ +..-..+++++++|.+..| +-.++.|.+.+...++.
T Consensus 78 avK~~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 78 CIKVVE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp CCCCCT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred ecCCCC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 999543 34433 3444567889999998876 33346677776654443
No 169
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.74 E-value=0.00012 Score=72.72 Aligned_cols=103 Identities=13% Similarity=0.023 Sum_probs=62.7
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEc---CchhhHHHHHHHhhhhhhh--hcCC--CC--cccc-ccCCHHHHhc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD---LYQATRLEKFVTAYGQFLK--ANGE--QP--VTWK-RASSMDEVLR 235 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d---~~~~~~~~~~~~~~~~~~~--~~~~--~~--~~~~-~~~~l~ell~ 235 (394)
++|+|||.|.||..+|..|++.-|.+|++|| ++.... +......+-.+. ..+. .. .... ...++++.+.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 81 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERW-TKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAIS 81 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHH-HHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHH-HHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhC
Confidence 4899999999999999998422489999999 543321 111110000000 0000 00 0011 2357888899
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~ 271 (394)
.+|+|++++|.. ....++ ++.-..+++++++++.
T Consensus 82 ~aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 82 GADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp TCSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 999999999943 344443 3444567889999985
No 170
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.73 E-value=6.8e-05 Score=72.42 Aligned_cols=116 Identities=18% Similarity=0.261 Sum_probs=69.1
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcC-CCCccccccCCHHHHhcccCEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
...++|+|||.|.||..+|..| ...|.+|..| ++.+. .+...+ .+-.....+ ..........++++ +..+|+|+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L-~~~G~~V~l~-~~~~~-~~~i~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vi 91 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGML-ARAGHEVILI-ARPQH-VQAIEA-TGLRLETQSFDEQVKVSASSDPSA-VQGADLVL 91 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHH-HHTTCEEEEE-CCHHH-HHHHHH-HCEEEECSSCEEEECCEEESCGGG-GTTCSEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHH-HHCCCeEEEE-EcHhH-HHHHHh-CCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEE
Confidence 4567999999999999999998 4678999999 66533 222111 000000000 00001111245544 68899999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 286 (394)
+++|.. .+..++ +..-..+++++++|.+..|= -.++.|.+.+
T Consensus 92 lavk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~ 133 (318)
T 3hwr_A 92 FCVKST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLL 133 (318)
T ss_dssp ECCCGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHC
T ss_pred EEcccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHc
Confidence 999953 555544 34445678999999987763 2234555555
No 171
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.72 E-value=4.9e-05 Score=61.18 Aligned_cols=94 Identities=17% Similarity=0.120 Sum_probs=59.3
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCC-cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhcccCEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVI 240 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV 240 (394)
.+++++|+|.|.||+.+++.| ...| .+|+++|++....... ...+.... ......++.+++..+|+|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l-~~~g~~~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALL-KTSSNYSVTVADHDLAALAVL---------NRMGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHH-HHCSSEEEEEEESCHHHHHHH---------HTTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECCCHHHHHHHHHH-HhCCCceEEEEeCCHHHHHHH---------HhCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 367999999999999999997 5778 8999999987543211 11111000 011113456778899999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
+.++|... +..++. ...+.|...++.+
T Consensus 74 i~~~~~~~-~~~~~~----~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 74 ISAAPFFL-TPIIAK----AAKAAGAHYFDLT 100 (118)
T ss_dssp EECSCGGG-HHHHHH----HHHHTTCEEECCC
T ss_pred EECCCchh-hHHHHH----HHHHhCCCEEEec
Confidence 99998332 222221 1234577777765
No 172
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.69 E-value=0.00029 Score=71.28 Aligned_cols=145 Identities=14% Similarity=0.088 Sum_probs=84.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHH-----------hhhhhhhhcCCCCccccccCCHHH
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVT-----------AYGQFLKANGEQPVTWKRASSMDE 232 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~e 232 (394)
+-.+|+|||+|-+|..+|..++ ..|.+|++||.+..+. +.... ++-......|. .....+.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A-~~G~~V~g~Did~~kV-~~ln~G~~pi~Epgl~ell~~~~~~g~----l~~tt~~~~ 93 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFA-LLGHRVVGYDVNPSIV-ERLRAGRPHIYEPGLEEALGRALSSGR----LSFAESAEE 93 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSCHHHH-HHHHTTCCSSCCTTHHHHHHHHHHTTC----EEECSSHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHH-hCCCcEEEEECCHHHH-HHHHCCCCCCCCCCHHHHHHHHHHcCC----eeEEcCHHH
Confidence 4568999999999999999984 6799999999987642 11110 00000001111 122357889
Q ss_pred HhcccCEEEEcCCCChhhh-------hccc--HHHHhcC---CCCcEEEEcCCCcccCHHHHHH-HHHcCCcceEEeec-
Q 016162 233 VLREADVISLHPVLDKTTY-------HLIN--KERLATM---KKEAILVNCSRGPVIDEVALVE-HLKQNPMFRVGLDV- 298 (394)
Q Consensus 233 ll~~aDiV~l~lPlt~~t~-------~li~--~~~l~~m---k~gailIN~aRG~~vde~aL~~-aL~~g~l~gaalDV- 298 (394)
.++.||++++|+| ||... .+.. +..-+.+ .+|.++|.-|+-.+=-++.+.. .+++.. .+.-.+|
T Consensus 94 ai~~ad~~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~ 171 (444)
T 3vtf_A 94 AVAATDATFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVA 171 (444)
T ss_dssp HHHTSSEEEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEE
T ss_pred HHhcCCceEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceee
Confidence 9999999999998 44321 1221 1122334 3688999999866644555443 444332 2222222
Q ss_pred cCCCCCCC----CccccCCceE
Q 016162 299 FEDEPYMK----PGLSEMKNAI 316 (394)
Q Consensus 299 ~~~EP~~~----~~L~~~~nvi 316 (394)
|.+|-+.. ..+...++|+
T Consensus 172 ~~PErl~eG~a~~d~~~~~riV 193 (444)
T 3vtf_A 172 SNPEFLREGSALEDFFKPDRIV 193 (444)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEE
T ss_pred cCcccccCCccccccccCCcEE
Confidence 45665532 1355666766
No 173
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.69 E-value=0.00018 Score=59.76 Aligned_cols=100 Identities=11% Similarity=0.180 Sum_probs=59.0
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHH---HH-hcccC
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD---EV-LREAD 238 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---el-l~~aD 238 (394)
+.+++++|+|+|.+|+.+++.| ...|.+|+++|++.... +. +...+.. .......+.+ ++ +.++|
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l-~~~g~~v~~~d~~~~~~-~~--------~~~~~~~-~~~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKEL-HRMGHEVLAVDINEEKV-NA--------YASYATH-AVIANATEENELLSLGIRNFE 72 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHH-HHTTCCCEEEESCHHHH-HT--------TTTTCSE-EEECCTTCHHHHHTTTGGGCS
T ss_pred CcCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH--------HHHhCCE-EEEeCCCCHHHHHhcCCCCCC
Confidence 5678999999999999999998 67899999999976432 11 1111110 0001122333 22 57899
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
+|++++|...++.. .-......+.+. .+|-.+++.
T Consensus 73 ~vi~~~~~~~~~~~-~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 73 YVIVAIGANIQAST-LTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp EEEECCCSCHHHHH-HHHHHHHHTTCS-EEEEECCSH
T ss_pred EEEECCCCchHHHH-HHHHHHHHcCCC-eEEEEeCCH
Confidence 99999986423221 123334445665 455544443
No 174
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.69 E-value=0.00014 Score=68.98 Aligned_cols=75 Identities=12% Similarity=0.060 Sum_probs=51.8
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh-cccC
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READ 238 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aD 238 (394)
.+++|+++.|+|.|.+|+.++..| ...|+ +|++++|+.++. ++..+.+. ...... .+++++- .++|
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~~-------~~~~~~---~~~~~l~~~~~D 183 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPF-LQAGPSELVIANRDMAKA-LALRNELD-------HSRLRI---SRYEALEGQSFD 183 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTCCSEEEEECSCHHHH-HHHHHHHC-------CTTEEE---ECSGGGTTCCCS
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHHHhc-------cCCeeE---eeHHHhcccCCC
Confidence 468899999999999999999998 57896 999999987653 22222221 101111 2333332 7899
Q ss_pred EEEEcCCCC
Q 016162 239 VISLHPVLD 247 (394)
Q Consensus 239 iV~l~lPlt 247 (394)
+|+.++|..
T Consensus 184 ivInaTp~g 192 (272)
T 3pwz_A 184 IVVNATSAS 192 (272)
T ss_dssp EEEECSSGG
T ss_pred EEEECCCCC
Confidence 999999943
No 175
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.64 E-value=5.9e-05 Score=71.92 Aligned_cols=100 Identities=20% Similarity=0.226 Sum_probs=63.7
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
.+++|+++.|+|.|.+|+.++..| ...|+ +|++++|+.++. ++..+.+. ..+ .. ...+++++..++|+
T Consensus 122 ~~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a-~~la~~~~----~~~--~~---~~~~~~~l~~~aDi 190 (281)
T 3o8q_A 122 VLLKGATILLIGAGGAARGVLKPL-LDQQPASITVTNRTFAKA-EQLAELVA----AYG--EV---KAQAFEQLKQSYDV 190 (281)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HTTCCSEEEEEESSHHHH-HHHHHHHG----GGS--CE---EEEEGGGCCSCEEE
T ss_pred CCccCCEEEEECchHHHHHHHHHH-HhcCCCeEEEEECCHHHH-HHHHHHhh----ccC--Ce---eEeeHHHhcCCCCE
Confidence 368899999999999999999998 57896 999999987652 22222221 111 01 11244555578999
Q ss_pred EEEcCCCChhhh-hcccHHHHhcCCCCcEEEEcCCC
Q 016162 240 ISLHPVLDKTTY-HLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 240 V~l~lPlt~~t~-~li~~~~l~~mk~gailIN~aRG 274 (394)
|+.++|..-... ..+.. +.++++.+++|+.-.
T Consensus 191 IInaTp~gm~~~~~~l~~---~~l~~~~~V~DlvY~ 223 (281)
T 3o8q_A 191 IINSTSASLDGELPAIDP---VIFSSRSVCYDMMYG 223 (281)
T ss_dssp EEECSCCCC----CSCCG---GGEEEEEEEEESCCC
T ss_pred EEEcCcCCCCCCCCCCCH---HHhCcCCEEEEecCC
Confidence 999999653211 12322 234566666676654
No 176
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.63 E-value=0.00027 Score=67.53 Aligned_cols=109 Identities=18% Similarity=0.312 Sum_probs=68.8
Q ss_pred CCeEEEEecChHHHH-HHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 165 gktvGIIGlG~IG~~-vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
-.++||||+|.||+. .++.+++.-+.++. ++|+++... +.+.+.| +. ..+.++++++.+.|+|++
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------~~-----~~~~~~~~ll~~~D~V~i 72 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKR-EKICSDY-------RI-----MPFDSIESLAKKCDCIFL 72 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHH-HHHHHHH-------TC-----CBCSCHHHHHTTCSEEEE
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHc-------CC-----CCcCCHHHHHhcCCEEEE
Confidence 368999999999997 88877433577877 789987643 2222333 21 125799999999999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHcCCc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEA-ILVN-CSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~ga-ilIN-~aRG~~vde~aL~~aL~~g~l 291 (394)
|+|........ .. .++.|. +++. -.--.+-+.++|.++.++..+
T Consensus 73 ~tp~~~h~~~~--~~---al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~ 118 (308)
T 3uuw_A 73 HSSTETHYEII--KI---LLNLGVHVYVDKPLASTVSQGEELIELSTKKNL 118 (308)
T ss_dssp CCCGGGHHHHH--HH---HHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTC
T ss_pred eCCcHhHHHHH--HH---HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCC
Confidence 99943322211 22 233343 4444 233345566778877776543
No 177
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.62 E-value=0.00013 Score=72.29 Aligned_cols=190 Identities=15% Similarity=0.179 Sum_probs=118.9
Q ss_pred CCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhc
Q 016162 108 YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEG 187 (394)
Q Consensus 108 ~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~ 187 (394)
.+|++.|+ --.-+|=-+++-+++.+| ..|..+...+|.|+|.|..|..+|+.+ .+
T Consensus 155 ~~ipvf~D---DiqGTa~V~lAall~al~---------------------l~g~~l~d~kVVi~GAGaAG~~iA~ll-~~ 209 (398)
T 2a9f_A 155 CHIPVFHD---DQHGTAIVVLAAIFNSLK---------------------LLKKSLDEVSIVVNGGGSAGLSITRKL-LA 209 (398)
T ss_dssp CSSCEEEH---HHHHHHHHHHHHHHHHHH---------------------TTTCCTTSCEEEEECCSHHHHHHHHHH-HH
T ss_pred CCcceecc---hhhhHHHHHHHHHHHHHH---------------------HhCCCCCccEEEEECCCHHHHHHHHHH-HH
Confidence 35888883 223445556666666555 134578999999999999999999997 78
Q ss_pred CCc-EEEEEcCchh------hHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHh
Q 016162 188 FKM-NLIYYDLYQA------TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (394)
Q Consensus 188 ~G~-~V~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~ 260 (394)
+|. +|+.+|+..- ..+..+.+.|..... . .....+|+|.+..+|+++=.- +.+++.++.++
T Consensus 210 ~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~---~----~~~~~~L~eav~~ADV~IG~S-----apgl~T~EmVk 277 (398)
T 2a9f_A 210 AGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTN---R----EFKSGTLEDALEGADIFIGVS-----APGVLKAEWIS 277 (398)
T ss_dssp HTCCEEEEEETTEECCTTCCCSCCC---CHHHHHS---C----TTCCCSCSHHHHTTCSEEECC-----STTCCCHHHHH
T ss_pred cCCCeEEEEECCCcccCCccccchHHHHHHhhccC---c----ccchhhHHHHhccCCEEEecC-----CCCCCCHHHHH
Confidence 899 9999998730 112222223321110 0 012357999999999988662 25899999999
Q ss_pred cCCCCcEEEEcCCCcc-cCHHHHHHHHHcCC-cceEEeeccCCCCCCCCccccCCceEEcCCCCCCcHHHH-----HHHH
Q 016162 261 TMKKEAILVNCSRGPV-IDEVALVEHLKQNP-MFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTR-----EGMA 333 (394)
Q Consensus 261 ~mk~gailIN~aRG~~-vde~aL~~aL~~g~-l~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~-----~~~~ 333 (394)
.|+++++++.+|+... +..++. .+.|+ +.+-+ -+..| -+-.|+++-|=++-....++ +.|.
T Consensus 278 ~Ma~~pIIfalsNPt~E~~pe~a---~~~g~~i~atG---rs~~p------~Q~NN~~~FPgi~~Gal~~~a~~I~d~m~ 345 (398)
T 2a9f_A 278 KMAARPVIFAMANPIPEIYPDEA---LEAGAYIVGTG---RSDFP------NQINNVLAFPGIFRGALDARAKTITVEMQ 345 (398)
T ss_dssp TSCSSCEEEECCSSSCSSCHHHH---HTTTCSEEEES---CTTSS------SBCCGGGTHHHHHHHHHHHTCSSCCHHHH
T ss_pred hhCCCCEEEECCCCCccCCHHHH---HHhCCeEEEeC---CCCCC------CcCCceeEcchHHHHHHHcCCcCCCHHHH
Confidence 9999999999998654 333333 33355 22222 11122 24467887776653222211 5566
Q ss_pred HHHHHHHHHHHcC
Q 016162 334 TLAALNVLGKIKG 346 (394)
Q Consensus 334 ~~~~~ni~~~l~g 346 (394)
..+++.|-....-
T Consensus 346 ~aAa~alA~~~~~ 358 (398)
T 2a9f_A 346 IAAAKGIASLVPD 358 (398)
T ss_dssp HHHHHHHHHTCSS
T ss_pred HHHHHHHHhcCCc
Confidence 6666666665544
No 178
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.61 E-value=0.00012 Score=69.30 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=50.7
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-ccCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (394)
++.|++++|+|.|.+|+.++..| ...|.+|++++|+.++. ++..+.+.. .+ .. ...+++++.+ ++|+|
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L-~~~G~~v~v~~R~~~~a-~~l~~~~~~----~~--~~---~~~~~~~~~~~~~Div 184 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPL-LQAQQNIVLANRTFSKT-KELAERFQP----YG--NI---QAVSMDSIPLQTYDLV 184 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHH-HHTTCEEEEEESSHHHH-HHHHHHHGG----GS--CE---EEEEGGGCCCSCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCEEEEEECCHHHH-HHHHHHccc----cC--Ce---EEeeHHHhccCCCCEE
Confidence 57899999999999999999998 57789999999987542 222222211 01 01 0123334333 89999
Q ss_pred EEcCCCCh
Q 016162 241 SLHPVLDK 248 (394)
Q Consensus 241 ~l~lPlt~ 248 (394)
+.++|...
T Consensus 185 In~t~~~~ 192 (272)
T 1p77_A 185 INATSAGL 192 (272)
T ss_dssp EECCCC--
T ss_pred EECCCCCC
Confidence 99999543
No 179
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.60 E-value=0.00032 Score=66.16 Aligned_cols=99 Identities=16% Similarity=0.171 Sum_probs=63.5
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh-cccCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV 240 (394)
++.|+++.|+|.|.+|+.+++.| ...|.+|++++|+.++. ++..+.++. .+ .. ...+++++. .++|+|
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L-~~~G~~V~v~~R~~~~~-~~la~~~~~----~~--~~---~~~~~~~~~~~~~Div 184 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPL-LSLDCAVTITNRTVSRA-EELAKLFAH----TG--SI---QALSMDELEGHEFDLI 184 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHH-HHHHHHTGG----GS--SE---EECCSGGGTTCCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHcCCEEEEEECCHHHH-HHHHHHhhc----cC--Ce---eEecHHHhccCCCCEE
Confidence 57899999999999999999998 57889999999987542 222222211 01 01 112333333 589999
Q ss_pred EEcCCCChhhhhc--ccHHHHhcCCCCcEEEEcCCCc
Q 016162 241 SLHPVLDKTTYHL--INKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 241 ~l~lPlt~~t~~l--i~~~~l~~mk~gailIN~aRG~ 275 (394)
+.++|.... ..+ +..+ .++++.+++|+....
T Consensus 185 Vn~t~~~~~-~~~~~i~~~---~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 185 INATSSGIS-GDIPAIPSS---LIHPGIYCYDMFYQK 217 (271)
T ss_dssp EECCSCGGG-TCCCCCCGG---GCCTTCEEEESCCCS
T ss_pred EECCCCCCC-CCCCCCCHH---HcCCCCEEEEeccCC
Confidence 999995432 111 2222 246778888877653
No 180
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.57 E-value=0.00079 Score=64.13 Aligned_cols=80 Identities=23% Similarity=0.255 Sum_probs=55.8
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
+++|+++.|+|.|.+|+.++..| ...|+ +|++++|+..+. ++..+.+.. .............++++.++++|+|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~~~---~~~~~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYAL-VTHGVQKLQVADLDTSRA-QALADVINN---AVGREAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSSHHHH-HHHHHHHHH---HHTSCCEEEECSTTHHHHHHHSSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEECCHHHH-HHHHHHHHh---hcCCceEEEcCHHHHHHHHhcCCEE
Confidence 57899999999999999999998 57898 799999997653 222222211 0000111111234788889999999
Q ss_pred EEcCCC
Q 016162 241 SLHPVL 246 (394)
Q Consensus 241 ~l~lPl 246 (394)
+.++|.
T Consensus 199 InaTp~ 204 (283)
T 3jyo_A 199 VNATPM 204 (283)
T ss_dssp EECSST
T ss_pred EECCCC
Confidence 999995
No 181
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.57 E-value=0.00018 Score=69.14 Aligned_cols=120 Identities=13% Similarity=0.169 Sum_probs=73.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhh-cCCCCc-cccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPV-TWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~ell~~aDiV~l~ 243 (394)
++|+|||.|.||..+|..| ...|.+|..|+|... +.. ...+-.... .+.... ......++++ +..+|+|+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L-~~~g~~V~~~~r~~~---~~i-~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALL-QRSGEDVHFLLRRDY---EAI-AGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHH-HHTSCCEEEECSTTH---HHH-HHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHH-HHCCCeEEEEEcCcH---HHH-HhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEe
Confidence 5899999999999999998 466889999999752 211 111100000 010000 0111245655 6899999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
+|.. .+...+ +..-..+++++++|.+.-| +-.++.|.+.+...++.++
T Consensus 77 vk~~-~~~~~l-~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 77 LKTF-ANSRYE-ELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp CCGG-GGGGHH-HHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEEE
T ss_pred cCCC-CcHHHH-HHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEEE
Confidence 9943 334333 3444567889999999876 2235667776655454443
No 182
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.57 E-value=0.00053 Score=66.35 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=54.4
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCc---hhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHH
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY---QATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV 233 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el 233 (394)
.+++||++.|+|.|.+|+.++..| ...|+ +|++++|+ ..+ .++..+.+.. ..+ .........+ +.+.
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L-~~~Ga~~V~i~nR~~~~~~~-a~~la~~~~~---~~~-~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQA-ALDGVKEISIFNRKDDFYAN-AEKTVEKINS---KTD-CKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTTHHH-HHHHHHHHHH---HSS-CEEEEEETTCHHHHHHH
T ss_pred CCccCCEEEEECCChHHHHHHHHH-HHCCCCEEEEEECCCchHHH-HHHHHHHhhh---hcC-CceEEeccchHHHHHhh
Confidence 368899999999999999999998 58898 89999998 433 2222222211 011 1111112223 5567
Q ss_pred hcccCEEEEcCCCC
Q 016162 234 LREADVISLHPVLD 247 (394)
Q Consensus 234 l~~aDiV~l~lPlt 247 (394)
+.++|+|+.++|..
T Consensus 224 l~~aDiIINaTp~G 237 (315)
T 3tnl_A 224 IAESVIFTNATGVG 237 (315)
T ss_dssp HHTCSEEEECSSTT
T ss_pred hcCCCEEEECccCC
Confidence 88999999999943
No 183
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.55 E-value=0.00022 Score=59.84 Aligned_cols=72 Identities=14% Similarity=0.070 Sum_probs=47.8
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHH----hcccCE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LREADV 239 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~~aDi 239 (394)
.++++.|+|+|.+|+.+|+.| ...|.+|+++|+++..... +...+.... .....+.+.+ +.++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L-~~~g~~V~~id~~~~~~~~---------~~~~~~~~~-~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVREL-TAAGKKVLAVDKSKEKIEL---------LEDEGFDAV-IADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHHHH---------HHHTTCEEE-ECCTTCHHHHHHSCCTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHHHH---------HHHCCCcEE-ECCCCCHHHHHhCCcccCCE
Confidence 457899999999999999998 6789999999998754221 111121100 1112233322 468999
Q ss_pred EEEcCCC
Q 016162 240 ISLHPVL 246 (394)
Q Consensus 240 V~l~lPl 246 (394)
|++++|.
T Consensus 74 vi~~~~~ 80 (141)
T 3llv_A 74 VLITGSD 80 (141)
T ss_dssp EEECCSC
T ss_pred EEEecCC
Confidence 9999993
No 184
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.51 E-value=0.00042 Score=66.65 Aligned_cols=68 Identities=18% Similarity=0.304 Sum_probs=48.1
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh-cccCEEEEcC
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~l 244 (394)
+|||||+|.||+..++.+++.-+.++. ++|++.... +.+.+.| +. ...+.++++++ .+.|+|++++
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~-~~~~~~~-------~~----~~~~~~~~~~l~~~~D~V~i~t 70 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETA-ATFASRY-------QN----IQLFDQLEVFFKSSFDLVYIAS 70 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHH-HHHGGGS-------SS----CEEESCHHHHHTSSCSEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHc-------CC----CeEeCCHHHHhCCCCCEEEEeC
Confidence 799999999999999987433367764 788887542 2221111 21 12356899999 7899999999
Q ss_pred CC
Q 016162 245 VL 246 (394)
Q Consensus 245 Pl 246 (394)
|.
T Consensus 71 p~ 72 (325)
T 2ho3_A 71 PN 72 (325)
T ss_dssp CG
T ss_pred Ch
Confidence 93
No 185
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.50 E-value=0.0003 Score=67.32 Aligned_cols=168 Identities=19% Similarity=0.177 Sum_probs=105.1
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHH-HHHHhcccCCcEEEEcccCccccch
Q 016162 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGET-LFAALSRAGGKAFSNMAVGYNNVDV 102 (394)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~el~~~~~-----~~~d~ii~~~~--~~i~~~-~l~~l~~l~~k~I~~~g~G~d~id~ 102 (394)
+..++.|++.+....++ ..+++|+.+.+. ++.++|+++.+ ..++++ ++++.+-. | -+|.+--
T Consensus 76 k~c~~vGi~s~~~~lp~-~~se~ell~~I~~LN~D~~V~GIlVQlPLP~hid~~~i~~~I~p~--K-------DVDG~hp 145 (303)
T 4b4u_A 76 NACRRVGMDSLKIELPQ-ETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLA--K-------DVDGVTC 145 (303)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGG--G-------CTTCCCH
T ss_pred HHHHHcCCeEEEEecCc-cCCHHHHHHHHHHhcCCCCccEEEEeCCCccccChHHHHhccCcc--c-------ccCccCc
Confidence 33456788877666554 357888887653 25789999864 445544 34443322 2 2333321
Q ss_pred hHHhhCCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChH-HHHHH
Q 016162 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRI-GSAYA 181 (394)
Q Consensus 103 ~~a~~~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~I-G~~vA 181 (394)
... |-.+.+.++ ....++.-++ .+++ ..+.+++||++.|||-++| |+.+|
T Consensus 146 ~N~---G~L~~g~~~-~~PcTp~gv~----~lL~---------------------~~~i~l~Gk~vvViGRS~iVGkPla 196 (303)
T 4b4u_A 146 LGF---GRMAMGEAA-YGSATPAGIM----TILK---------------------ENNIEIAGKHAVVVGRSAILGKPMA 196 (303)
T ss_dssp HHH---HHHHTTCCC-CCCHHHHHHH----HHHH---------------------HTTCCCTTCEEEEECCCTTTHHHHH
T ss_pred chH---HHhcCCCCc-ccCccHHHHH----HHHH---------------------HHCCCCCCCEEEEEeccccccchHH
Confidence 111 111122333 2223332222 1221 1235799999999998875 99999
Q ss_pred HHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhc
Q 016162 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (394)
Q Consensus 182 ~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~ 261 (394)
..| ..-|++|+..... ..++.+..++||+|+.++.. .++|..+.
T Consensus 197 ~LL-~~~~ATVTi~Hs~----------------------------T~dl~~~~~~ADIvV~A~G~----p~~i~~d~--- 240 (303)
T 4b4u_A 197 MML-LQANATVTICHSR----------------------------TQNLPELVKQADIIVGAVGK----AELIQKDW--- 240 (303)
T ss_dssp HHH-HHTTCEEEEECTT----------------------------CSSHHHHHHTCSEEEECSCS----TTCBCGGG---
T ss_pred HHH-HhcCCEEEEecCC----------------------------CCCHHHHhhcCCeEEeccCC----CCcccccc---
Confidence 987 6789999876432 24789999999999999752 45777765
Q ss_pred CCCCcEEEEcCC
Q 016162 262 MKKEAILVNCSR 273 (394)
Q Consensus 262 mk~gailIN~aR 273 (394)
.|+|+++||++-
T Consensus 241 vk~GavVIDVGi 252 (303)
T 4b4u_A 241 IKQGAVVVDAGF 252 (303)
T ss_dssp SCTTCEEEECCC
T ss_pred ccCCCEEEEece
Confidence 489999999975
No 186
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.47 E-value=0.00063 Score=65.61 Aligned_cols=69 Identities=26% Similarity=0.465 Sum_probs=50.4
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
.+|||||+|.||+..++.+.+.-+++++ ++|+++... +.+.+.| + .. +.+++++++ +.|+|++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~-------~-----~~-~~~~~~~l~~~~~D~V~i 69 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAA-EAIAGAY-------G-----CE-VRTIDAIEAAADIDAVVI 69 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHHT-------T-----CE-ECCHHHHHHCTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHH-HHHHHHh-------C-----CC-cCCHHHHhcCCCCCEEEE
Confidence 4899999999999999987433478877 689987542 2222222 1 12 578999998 8999999
Q ss_pred cCCCCh
Q 016162 243 HPVLDK 248 (394)
Q Consensus 243 ~lPlt~ 248 (394)
|+|...
T Consensus 70 ~tp~~~ 75 (331)
T 4hkt_A 70 CTPTDT 75 (331)
T ss_dssp CSCGGG
T ss_pred eCCchh
Confidence 999443
No 187
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.44 E-value=0.00041 Score=67.28 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=65.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
.+|||||+|.||+..++.+++.-+++++ ++|++.... +.+.+.| + ...+.++++++. +.|+|++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g-----~~~~~~~~~~l~~~~~D~V~i 71 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGA-QRLAEAN-------G-----AEAVASPDEVFARDDIDGIVI 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHTT-------T-----CEEESSHHHHTTCSCCCEEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433478876 689887542 2222222 2 224579999998 8999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCC-cEEEEcC-CCcccCHHHHHHHHHcCCc
Q 016162 243 HPVLDKTTYHLINKERLATMKKE-AILVNCS-RGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~g-ailIN~a-RG~~vde~aL~~aL~~g~l 291 (394)
|+|........ ...+ +.| .+++.-- .-.+-+.++|.++.++..+
T Consensus 72 ~tp~~~h~~~~--~~al---~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~ 117 (344)
T 3euw_A 72 GSPTSTHVDLI--TRAV---ERGIPALCEKPIDLDIEMVRACKEKIGDGAS 117 (344)
T ss_dssp CSCGGGHHHHH--HHHH---HTTCCEEECSCSCSCHHHHHHHHHHHGGGGG
T ss_pred eCCchhhHHHH--HHHH---HcCCcEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 99943332211 2222 222 2444321 2233445556666665443
No 188
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.44 E-value=0.00058 Score=65.06 Aligned_cols=70 Identities=14% Similarity=0.103 Sum_probs=50.2
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
.++.|+++.|+|.|.+|+.++..| ...|+ +|++++|+.++.. +..+ . .....+.++++ + ++|+
T Consensus 118 ~~~~~k~vlvlGaGGaaraia~~L-~~~G~~~v~v~nRt~~ka~-~La~----------~--~~~~~~~~l~~-l-~~Di 181 (282)
T 3fbt_A 118 VEIKNNICVVLGSGGAARAVLQYL-KDNFAKDIYVVTRNPEKTS-EIYG----------E--FKVISYDELSN-L-KGDV 181 (282)
T ss_dssp CCCTTSEEEEECSSTTHHHHHHHH-HHTTCSEEEEEESCHHHHH-HHCT----------T--SEEEEHHHHTT-C-CCSE
T ss_pred CCccCCEEEEECCcHHHHHHHHHH-HHcCCCEEEEEeCCHHHHH-HHHH----------h--cCcccHHHHHh-c-cCCE
Confidence 357899999999999999999998 67898 9999999976521 1110 0 11111223444 4 8999
Q ss_pred EEEcCCC
Q 016162 240 ISLHPVL 246 (394)
Q Consensus 240 V~l~lPl 246 (394)
|+.++|.
T Consensus 182 vInaTp~ 188 (282)
T 3fbt_A 182 IINCTPK 188 (282)
T ss_dssp EEECSST
T ss_pred EEECCcc
Confidence 9999995
No 189
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.42 E-value=0.00025 Score=71.65 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=79.6
Q ss_pred ccccCCCeEEEEecChHHHHHHHHHHhcCCc---EEEEEc----Cc----hhhH---HHHHHHhhhhhhhhcCCCCcccc
Q 016162 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYD----LY----QATR---LEKFVTAYGQFLKANGEQPVTWK 225 (394)
Q Consensus 160 g~~l~gktvGIIGlG~IG~~vA~~la~~~G~---~V~~~d----~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 225 (394)
|..+.++++.|+|.|..|+.+++.| ...|+ +|+++| |+ .... +..+...|. . .... ..
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L-~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a---~---~~~~-~~ 252 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRIL-TEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLL---K---KTNG-EN 252 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHH-HHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHH---T---TSCT-TC
T ss_pred CCCccCCEEEEECccHHHHHHHHHH-HHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHh---h---cccc-cc
Confidence 3568899999999999999999998 68898 799999 76 2211 111111111 0 0000 00
Q ss_pred ccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 016162 226 RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (394)
Q Consensus 226 ~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~ 290 (394)
...++.+.+..+|+|+.+.|..+ +++.++.++.|+++.++++++... .|.-+.+|.+.|.
T Consensus 253 ~~~~L~e~l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 253 IEGGPQEALKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp CCSSHHHHHTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred ccccHHHHhccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 13578899999999999998422 556667788899999999995533 4444555555553
No 190
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.40 E-value=0.0011 Score=71.11 Aligned_cols=147 Identities=18% Similarity=0.196 Sum_probs=93.0
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHH--HHH-hhh---hhhhhcCC--CCccccccCCHHHHhccc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVT-AYG---QFLKANGE--QPVTWKRASSMDEVLREA 237 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~--~~~-~~~---~~~~~~~~--~~~~~~~~~~l~ell~~a 237 (394)
++|||||.|.||+.+|..+ ...|++|+.+|+.++..... ... .+. ........ .........+.+ .+++|
T Consensus 317 ~~v~ViGaG~MG~gIA~~~-a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~a 394 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISF-ARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTV 394 (742)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSC
T ss_pred cEEEEEcccHHHHHHHHHH-HhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhC
Confidence 6899999999999999987 47899999999987642211 110 000 00010111 111112233444 47899
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEE
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIV 317 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvil 317 (394)
|+|+=++|-+.+.+.-+-++.=+.++++++|-.-+.+ +.-..|.++++ ..-+..++-.|. |.+.-||.+ ||-
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfn--P~~~m~LVE---vi~ 466 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFS--PAHVMRLLE---VIP 466 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCS--STTTCCEEE---EEE
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccC--CCCCCceEE---Eec
Confidence 9999999988877766656666778999998554433 44566776654 345678888775 332235555 676
Q ss_pred cCCCC
Q 016162 318 VPHIA 322 (394)
Q Consensus 318 TPHia 322 (394)
+|+.+
T Consensus 467 g~~Ts 471 (742)
T 3zwc_A 467 SRYSS 471 (742)
T ss_dssp CSSCC
T ss_pred CCCCC
Confidence 66544
No 191
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.39 E-value=0.00067 Score=65.06 Aligned_cols=109 Identities=15% Similarity=0.174 Sum_probs=68.3
Q ss_pred CeEEEEecChHHHH-HHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.+|||||+|.||+. +++.+++.-++++. ++|++.... +.+.+.| +. ..+.+++++..++|+|+++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~~~~~-------g~-----~~~~~~~~l~~~~D~V~i~ 72 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPICESW-------RI-----PYADSLSSLAASCDAVFVH 72 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHHHHHH-------TC-----CBCSSHHHHHTTCSEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHc-------CC-----CccCcHHHhhcCCCEEEEe
Confidence 48999999999997 88876433477876 889887543 2222222 21 1245777776789999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 016162 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~l~ 292 (394)
+|....... ....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 73 tp~~~h~~~-----~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 73 SSTASHFDV-----VSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp SCTTHHHHH-----HHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCchhHHHH-----HHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 994433221 222344565 55652 233445667788887776544
No 192
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.38 E-value=0.0011 Score=64.10 Aligned_cols=81 Identities=16% Similarity=0.182 Sum_probs=54.5
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCc---hhhHHHHHHHhhhhhhhhcCCCCccccccCCH---HHH
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY---QATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV 233 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~el 233 (394)
.+++|+++.|+|.|.+|+.++..| ...|+ +|++++|+ ..+. ++..+.+.. ..+ .........++ .+.
T Consensus 144 ~~l~gk~~lVlGAGGaaraia~~L-~~~G~~~v~v~nRt~~~~~~a-~~la~~~~~---~~~-~~v~~~~~~~l~~~~~~ 217 (312)
T 3t4e_A 144 FDMRGKTMVLLGAGGAATAIGAQA-AIEGIKEIKLFNRKDDFFEKA-VAFAKRVNE---NTD-CVVTVTDLADQHAFTEA 217 (312)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTHHHHH-HHHHHHHHH---HSS-CEEEEEETTCHHHHHHH
T ss_pred CCcCCCEEEEECcCHHHHHHHHHH-HHcCCCEEEEEECCCchHHHH-HHHHHHhhh---ccC-cceEEechHhhhhhHhh
Confidence 368899999999999999999998 57898 89999998 4332 222222211 001 11111223454 567
Q ss_pred hcccCEEEEcCCCC
Q 016162 234 LREADVISLHPVLD 247 (394)
Q Consensus 234 l~~aDiV~l~lPlt 247 (394)
+.++|+|+.++|..
T Consensus 218 l~~~DiIINaTp~G 231 (312)
T 3t4e_A 218 LASADILTNGTKVG 231 (312)
T ss_dssp HHHCSEEEECSSTT
T ss_pred ccCceEEEECCcCC
Confidence 88999999999953
No 193
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.37 E-value=0.00033 Score=67.21 Aligned_cols=106 Identities=17% Similarity=0.125 Sum_probs=65.2
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
.+|||||+|.||+..++.+++.-+.++ .++|+++.... . + ... ...+.+++++++ ++|+|++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~-~----~-------~~~---~~~~~~~~~~l~~~~~D~V~i 75 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLA-L----V-------PPG---CVIESDWRSVVSAPEVEAVII 75 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHT-T----C-------CTT---CEEESSTHHHHTCTTCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHH-H----H-------Hhh---CcccCCHHHHhhCCCCCEEEE
Confidence 479999999999999998743336775 48898865421 1 0 011 123568899986 7999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~l 291 (394)
++|...... -....++.|. ++++- .--.+-+.++|.++.++..+
T Consensus 76 ~tp~~~h~~-----~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~ 121 (315)
T 3c1a_A 76 ATPPATHAE-----ITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGV 121 (315)
T ss_dssp ESCGGGHHH-----HHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCC
T ss_pred eCChHHHHH-----HHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCC
Confidence 999332211 1223345564 55552 22234455677777765443
No 194
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.37 E-value=0.00076 Score=57.49 Aligned_cols=100 Identities=8% Similarity=0.007 Sum_probs=58.4
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccC---CHHHH-hcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS---SMDEV-LREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~el-l~~aDiV 240 (394)
.+++.|+|+|.+|+.+++.| ...|.+|+++|+++....+...+.+ ..+.. ....... .+++. +.++|.|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L-~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~-~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQL-NQRGQNVTVISNLPEDDIKQLEQRL-----GDNAD-VIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEECCCHHHHHHHHHHH-----CTTCE-EEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHH-HHCCCCEEEEECCChHHHHHHHHhh-----cCCCe-EEEcCCCCHHHHHHcChhhCCEE
Confidence 56899999999999999998 6789999999997432211111110 11110 0000112 24444 7899999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+++++....+ +.-......+.+...+|...+
T Consensus 76 i~~~~~d~~n--~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 76 LALSDNDADN--AFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp EECSSCHHHH--HHHHHHHHHHTSSSCEEEECS
T ss_pred EEecCChHHH--HHHHHHHHHHCCCCEEEEEEC
Confidence 9999854333 222344444544444544433
No 195
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.36 E-value=0.00038 Score=67.09 Aligned_cols=118 Identities=12% Similarity=0.186 Sum_probs=67.2
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.++|+|||.|.||..+|..++ ..|. +|+.||++.........+ ......... .........++ +.++.||+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la-~~g~~~V~l~D~~~~~~~~~~~~-l~~~~~~~~-~~~~i~~t~d~-~a~~~aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVG-KDNLADVVLFDIAEGIPQGKALD-ITHSMVMFG-STSKVIGTDDY-ADISGSDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHHHHHHHH-HHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCCchHHHHHHHH-HHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEe
Confidence 468999999999999999985 4476 899999986432211111 000000000 11112222466 678999999999
Q ss_pred CCC--Ch---------hhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 016162 244 PVL--DK---------TTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (394)
Q Consensus 244 lPl--t~---------~t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL 286 (394)
++. .+ ++..++. .+.+....|++++++++...-+....+.+..
T Consensus 80 vg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 80 ASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp CCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 842 11 1111111 1122223469999999876545455555543
No 196
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.36 E-value=0.00063 Score=66.30 Aligned_cols=70 Identities=21% Similarity=0.295 Sum_probs=50.7
Q ss_pred CCeEEEEecChHHHHHHHHHHhc-CCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (394)
-.+|||||+|.||+..++.+++. -+++++ ++|++.... +.+.+.| + ...+.++++++. +.|+|
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~~~~~-------~-----~~~~~~~~~ll~~~~~D~V 79 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAAL-KAAVERT-------G-----ARGHASLTDMLAQTDADIV 79 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHH-HHHHHHH-------C-----CEEESCHHHHHHHCCCSEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCCCEE
Confidence 35899999999999999987433 378865 789887543 2222222 2 124579999997 79999
Q ss_pred EEcCCCC
Q 016162 241 SLHPVLD 247 (394)
Q Consensus 241 ~l~lPlt 247 (394)
++|+|..
T Consensus 80 ~i~tp~~ 86 (354)
T 3q2i_A 80 ILTTPSG 86 (354)
T ss_dssp EECSCGG
T ss_pred EECCCcH
Confidence 9999943
No 197
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.36 E-value=0.00033 Score=67.42 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=49.3
Q ss_pred CeEEEEecChHHHHHHHHHHhc-CCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~-~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+|||.|.+|..+|..++.. +|.+|+.||+..... +.....+.+...... .........++++ ++.||+|++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~-~~~~~~l~~~~~~~~-~~~~i~~t~d~~~-l~~aDvViiav 77 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIP-QGKALDMYESGPVGL-FDTKVTGSNDYAD-TANSDIVIITA 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCEEEEESCGGG-GTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHH-HHHHHhHHhhhhccc-CCcEEEECCCHHH-HCCCCEEEEeC
Confidence 3799999999999999988653 688999999986432 211111100000000 1111222256766 89999999999
Q ss_pred CC
Q 016162 245 VL 246 (394)
Q Consensus 245 Pl 246 (394)
|.
T Consensus 78 ~~ 79 (310)
T 1guz_A 78 GL 79 (310)
T ss_dssp SC
T ss_pred CC
Confidence 73
No 198
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.33 E-value=0.00049 Score=58.58 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=68.9
Q ss_pred CCCeEEEEec----ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 164 KGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 164 ~gktvGIIGl----G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
+-++|+|||. |++|..+++.| +..|++|+..+|..... . .. +...+.+++|+-...|+
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l-~~~G~~v~~vnp~~~~~--~-------------i~--G~~~~~sl~el~~~vDl 73 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYL-REQGYRVLPVNPRFQGE--E-------------LF--GEEAVASLLDLKEPVDI 73 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHH-HHTTCEEEEECGGGTTS--E-------------ET--TEECBSSGGGCCSCCSE
T ss_pred CCCEEEEECCCCCCCChHHHHHHHH-HHCCCEEEEeCCCcccC--c-------------CC--CEEecCCHHHCCCCCCE
Confidence 4568999999 89999999998 68888877776652110 0 01 12235688888888999
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
+++++|. +....++. +..+. ..+.++++.+. . ++++.+.+++..+.
T Consensus 74 avi~vp~-~~~~~v~~-~~~~~-gi~~i~~~~g~---~-~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 74 LDVFRPP-SALMDHLP-EVLAL-RPGLVWLQSGI---R-HPEFEKALKEAGIP 119 (140)
T ss_dssp EEECSCH-HHHTTTHH-HHHHH-CCSCEEECTTC---C-CHHHHHHHHHTTCC
T ss_pred EEEEeCH-HHHHHHHH-HHHHc-CCCEEEEcCCc---C-HHHHHHHHHHcCCE
Confidence 9999995 55566663 33332 33456665433 2 57777777765554
No 199
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.31 E-value=0.0011 Score=64.57 Aligned_cols=106 Identities=15% Similarity=0.244 Sum_probs=63.6
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.++|+|||.|.+|..+|..|+ ..|. +|..||+..... +.......+.....+ .........++++.++.||+|+++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la-~~g~~~V~L~D~~~~~~-~~~~~~l~~~~~~~~-~~~~i~~t~d~~ea~~~aDiVi~a 85 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCA-LRELADVVLYDVVKGMP-EGKALDLSHVTSVVD-TNVSVRAEYSYEAALTGADCVIVT 85 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHH-HHHHHHHHHHHHHTT-CCCCEEEECSHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECChhHH-HHHHHHHHhhhhccC-CCCEEEEeCCHHHHhCCCCEEEEc
Confidence 358999999999999999985 4465 899999986432 211111111111111 112222236888889999999999
Q ss_pred C--CCChhh------hh-c-------cc--HHHHhcCCCCcEEEEcCC
Q 016162 244 P--VLDKTT------YH-L-------IN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 244 l--Plt~~t------~~-l-------i~--~~~l~~mk~gailIN~aR 273 (394)
. |..+.. +- + +. .+.+....|++++++++.
T Consensus 86 ~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 133 (331)
T 1pzg_A 86 AGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTN 133 (331)
T ss_dssp CSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred cCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 8 654422 10 0 10 112223348899998865
No 200
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.29 E-value=0.00096 Score=64.52 Aligned_cols=110 Identities=15% Similarity=0.147 Sum_probs=66.4
Q ss_pred CeEEEEecChHHHHHHHHHH-hcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMV-EGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la-~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (394)
.+|||||+|.||+..++.++ +.-++++ .++|+++... +.+.+.| +.. ..+.++++++. ++|+|+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~-~~~a~~~-------g~~----~~~~~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQL-EWAKNEL-------GVE----TTYTNYKDMIDTENIDAIF 76 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHH-HHHHHTT-------CCS----EEESCHHHHHTTSCCSEEE
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHH-HHHHHHh-------CCC----cccCCHHHHhcCCCCCEEE
Confidence 48999999999999999874 3347875 5789887542 2222221 210 23468999986 699999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcC-Ccc
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQN-PMF 292 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g-~l~ 292 (394)
+|+|..... +-....++.|. +++.- ..-.+-+.++|.++.++. .+.
T Consensus 77 i~tp~~~h~-----~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 77 IVAPTPFHP-----EMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp ECSCGGGHH-----HHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred EeCChHhHH-----HHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 999943221 11223345565 44431 112233445577777766 544
No 201
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.27 E-value=0.00044 Score=66.44 Aligned_cols=121 Identities=15% Similarity=0.133 Sum_probs=67.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCC--CCccccccCCHHHHhcccCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDiV~ 241 (394)
++|+|||.|.+|..+|..+ ...|. +|..+|+..... +.....+ .+... ....... .+. +.++.||+|+
T Consensus 1 mkI~VIGaG~vG~~la~~l-a~~g~~~eV~L~D~~~~~~-~~~~~~l----~~~~~~~~~~~i~~-~~~-~a~~~aDvVI 72 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFAL-VLRGSCSELVLVDRDEDRA-QAEAEDI----AHAAPVSHGTRVWH-GGH-SELADAQVVI 72 (304)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCCSEEEEECSSHHHH-HHHHHHH----TTSCCTTSCCEEEE-ECG-GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCCCEEEEEeCCHHHH-HHHHHhh----hhhhhhcCCeEEEE-CCH-HHhCCCCEEE
Confidence 4899999999999999987 45577 999999986432 2111111 11110 0111111 343 5689999999
Q ss_pred EcCCCChh-----------hhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 242 LHPVLDKT-----------TYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 242 l~lPlt~~-----------t~~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
++++.... +..++. .+.+....|++++++++.+.-+....+.+.....++.|.
T Consensus 73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 99953221 111111 122333358999999876544444444444444455444
No 202
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.27 E-value=0.00037 Score=66.89 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=61.7
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.+|||||+|+||+.+++.+++.-++++. ++|+++... + ..|. .+..+.++.+. .++|+|++|+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~-~-----------~~g~---~~~~~~~l~~~-~~~DvViiat 73 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEV-P-----------FELQ---PFRVVSDIEQL-ESVDVALVCS 73 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------------------CCT---TSCEESSGGGS-SSCCEEEECS
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHH-H-----------HcCC---CcCCHHHHHhC-CCCCEEEECC
Confidence 4899999999999999987444578887 689876532 1 1121 11223455554 7899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCC--C-cccCHHHHHHHHHcCC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSR--G-PVIDEVALVEHLKQNP 290 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aR--G-~~vde~aL~~aL~~g~ 290 (394)
|. .+.. +-....++.|.-+++..- + .+.+.+.|.++.++..
T Consensus 74 p~--~~h~---~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 74 PS--REVE---RTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp CH--HHHH---HHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred Cc--hhhH---HHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 93 2221 222344566777776431 2 2334466777766644
No 203
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.27 E-value=0.001 Score=63.90 Aligned_cols=107 Identities=15% Similarity=0.220 Sum_probs=64.4
Q ss_pred eEEEEecChHHHHH-HHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 167 TVGVIGAGRIGSAY-ARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 167 tvGIIGlG~IG~~v-A~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
+|||||+|.||+.+ ++.+++ -+.+++ ++|++.... +++.+.| +.. ..+.+++++++ ++|+|++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~-~~~~~~~-------g~~----~~~~~~~~~l~~~~~D~V~i 68 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERG-AAYATEN-------GIG----KSVTSVEELVGDPDVDAVYV 68 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHH-HHHHHHT-------TCS----CCBSCHHHHHTCTTCCEEEE
T ss_pred eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHH-HHHHHHc-------CCC----cccCCHHHHhcCCCCCEEEE
Confidence 79999999999998 777655 778865 789887543 2222222 211 12468999987 4999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~l 291 (394)
++|...... -....++.|. +++.- ....+-+.+.|.++.++..+
T Consensus 69 ~tp~~~h~~-----~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~ 114 (332)
T 2glx_A 69 STTNELHRE-----QTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGV 114 (332)
T ss_dssp CSCGGGHHH-----HHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred eCChhHhHH-----HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCC
Confidence 999332211 1122344555 44432 12233444566666655433
No 204
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.25 E-value=0.00061 Score=62.68 Aligned_cols=98 Identities=22% Similarity=0.234 Sum_probs=63.9
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
..-++.|+++.|||.|.+|...++.| ...|++|+++++..........+ .+........+ + ++.+..+|
T Consensus 25 ifl~L~gk~VLVVGgG~va~~ka~~L-l~~GA~VtVvap~~~~~l~~l~~--------~~~i~~i~~~~-~-~~dL~~ad 93 (223)
T 3dfz_A 25 VMLDLKGRSVLVVGGGTIATRRIKGF-LQEGAAITVVAPTVSAEINEWEA--------KGQLRVKRKKV-G-EEDLLNVF 93 (223)
T ss_dssp EEECCTTCCEEEECCSHHHHHHHHHH-GGGCCCEEEECSSCCHHHHHHHH--------TTSCEEECSCC-C-GGGSSSCS
T ss_pred cEEEcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCCHHHHHHHH--------cCCcEEEECCC-C-HhHhCCCC
Confidence 44689999999999999999999998 68899999999987654443221 12111111111 2 34578899
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+|+.++. +++ +|.......+ -.++||++.
T Consensus 94 LVIaAT~-d~~----~N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 94 FIVVATN-DQA----VNKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp EEEECCC-CTH----HHHHHHHHSC-TTCEEEC--
T ss_pred EEEECCC-CHH----HHHHHHHHHh-CCCEEEEeC
Confidence 9998865 333 2444444455 557888754
No 205
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.23 E-value=0.0016 Score=62.50 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=48.2
Q ss_pred CeEEEEecChHHHHHHHHHHhcCC--cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
++|+|||.|.||..+|..|+ ..| .+|+.||++.... +.....+.+.....+ ...... ..++ +.++.||+|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~-~~g~~~~V~l~d~~~~~~-~~~~~~l~~~~~~~~-~~~~~~-~~d~-~~~~~aDvViia 76 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLI-AQGVADDYVFIDANEAKV-KADQIDFQDAMANLE-AHGNIV-INDW-AALADADVVIST 76 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHHH-HHHHHHHHHHGGGSS-SCCEEE-ESCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEcCCHHHH-HHHHHHHHhhhhhcC-CCeEEE-eCCH-HHhCCCCEEEEe
Confidence 48999999999999999885 446 6999999986532 221111111110000 011111 2466 678999999999
Q ss_pred CCC
Q 016162 244 PVL 246 (394)
Q Consensus 244 lPl 246 (394)
+|.
T Consensus 77 v~~ 79 (309)
T 1hyh_A 77 LGN 79 (309)
T ss_dssp CSC
T ss_pred cCC
Confidence 985
No 206
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.00073 Score=67.25 Aligned_cols=105 Identities=15% Similarity=0.269 Sum_probs=66.9
Q ss_pred eEEEEecChHHHHHHHHHHhc-------CCcEEEEEcCchhhHHHHHHHhhhhhhhhcC-------CCCccccccCCHHH
Q 016162 167 TVGVIGAGRIGSAYARMMVEG-------FKMNLIYYDLYQATRLEKFVTAYGQFLKANG-------EQPVTWKRASSMDE 232 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~-------~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~e 232 (394)
+|+|||.|.-|.++|..|++. ++.+|..|.|..+...+...+.+.. .+.+ ..+.......|+++
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~--~~~N~~YLpgv~Lp~~i~~t~dl~~ 113 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINT--RHQNVKYLPGITLPDNLVANPDLID 113 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTT--TCCBTTTBTTCCCCSSEEEESCHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHh--cCcCcccCCCCcCCCCcEEeCCHHH
Confidence 899999999999999988542 2346888876643211111111100 0001 11222233468999
Q ss_pred HhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 233 ll~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
.++.||+|++++| +...+.++ ++.-..++++..+|+++-|=
T Consensus 114 al~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 114 SVKDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp HHTTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCSC
T ss_pred HHhcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEecccc
Confidence 9999999999999 34444444 34455678999999999874
No 207
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.23 E-value=0.00069 Score=57.86 Aligned_cols=103 Identities=10% Similarity=0.089 Sum_probs=69.0
Q ss_pred CCeEEEEec----ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 165 gktvGIIGl----G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
-++|+|||. |++|..+++.| +..|.+|+..+|.... .. +...+.+++|+....|++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l-~~~G~~v~~Vnp~~~~-----------------i~--G~~~y~sl~~l~~~vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYL-LEHGYDVYPVNPKYEE-----------------VL--GRKCYPSVLDIPDKIEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSE-----------------ET--TEECBSSGGGCSSCCSEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHH-HHCCCEEEEECCCCCe-----------------EC--CeeccCCHHHcCCCCCEE
Confidence 679999999 79999999998 6788887777765311 01 122356888888889999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
++++|. +....++. +..+ ...+.++++. |. .++++.+++++..+.-.
T Consensus 82 vi~vp~-~~~~~vv~-~~~~-~gi~~i~~~~--g~--~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 82 DLFVKP-KLTMEYVE-QAIK-KGAKVVWFQY--NT--YNREASKKADEAGLIIV 128 (144)
T ss_dssp EECSCH-HHHHHHHH-HHHH-HTCSEEEECT--TC--CCHHHHHHHHHTTCEEE
T ss_pred EEEeCH-HHHHHHHH-HHHH-cCCCEEEECC--Cc--hHHHHHHHHHHcCCEEE
Confidence 999994 45555553 3333 2234555543 22 36777887777655533
No 208
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.22 E-value=0.00072 Score=64.20 Aligned_cols=105 Identities=15% Similarity=0.151 Sum_probs=64.9
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
++.|+++.|+|.|.||+++|+.| ...| +|++++|+..+. ++..+.+..... ....... ...++.+.+.++|+|+
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L-~~~G-~V~v~~r~~~~~-~~l~~~~~~~~~--~~~~~~~-d~~~~~~~~~~~DilV 198 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFEL-AKDN-NIIIANRTVEKA-EALAKEIAEKLN--KKFGEEV-KFSGLDVDLDGVDIII 198 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHH-TSSS-EEEEECSSHHHH-HHHHHHHHHHHT--CCHHHHE-EEECTTCCCTTCCEEE
T ss_pred CcCCCEEEEECchHHHHHHHHHH-HHCC-CEEEEECCHHHH-HHHHHHHhhhcc--cccceeE-EEeeHHHhhCCCCEEE
Confidence 57899999999999999999998 5889 999999987542 222222211000 0000000 1122345578899999
Q ss_pred EcCCCChhhh---hcccHHHHhcCCCCcEEEEcCCC
Q 016162 242 LHPVLDKTTY---HLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 242 l~lPlt~~t~---~li~~~~l~~mk~gailIN~aRG 274 (394)
.++|...... ..+. ..+.++++.+++|+...
T Consensus 199 n~ag~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 199 NATPIGMYPNIDVEPIV--KAEKLREDMVVMDLIYN 232 (287)
T ss_dssp ECSCTTCTTCCSSCCSS--CSTTCCSSSEEEECCCS
T ss_pred ECCCCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeC
Confidence 9998543210 0120 13457888999998864
No 209
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.21 E-value=0.0012 Score=63.71 Aligned_cols=70 Identities=13% Similarity=0.217 Sum_probs=47.8
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
.++||||+|.||+..++.+++.-+.++. ++|++.... +++.+.| +. . ..+.++++++. +.|+|++
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~-~~~a~~~-------~~---~-~~~~~~~~ll~~~~~D~V~i 73 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESA-QAFANKY-------HL---P-KAYDKLEDMLADESIDVIYV 73 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTT-CC---CC-------CC---S-CEESCHHHHHTCTTCCEEEE
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHHHHHc-------CC---C-cccCCHHHHhcCCCCCEEEE
Confidence 5899999999999999887443466655 678876542 1111111 11 0 13579999998 7999999
Q ss_pred cCCCC
Q 016162 243 HPVLD 247 (394)
Q Consensus 243 ~lPlt 247 (394)
++|..
T Consensus 74 ~tp~~ 78 (329)
T 3evn_A 74 ATINQ 78 (329)
T ss_dssp CSCGG
T ss_pred CCCcH
Confidence 99943
No 210
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.20 E-value=0.0014 Score=63.90 Aligned_cols=70 Identities=26% Similarity=0.387 Sum_probs=51.0
Q ss_pred CeEEEEecChHHHHHHHHHHhcC-CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh--cccCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--READVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--~~aDiV~ 241 (394)
.+|||||+|.||+..++.+ +.. +++++ ++|++.... +.+.+.| +. ..+.++++++ .+.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~lvav~d~~~~~~-~~~~~~~-------g~-----~~~~~~~~~l~~~~~D~V~ 71 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAY-TKSEKLKLVTCYSRTEDKR-EKFGKRY-------NC-----AGDATMEALLAREDVEMVI 71 (354)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTCSSEEEEEEECSSHHHH-HHHHHHH-------TC-----CCCSSHHHHHHCSSCCEEE
T ss_pred ceEEEEccCHHHHHHHHHH-HhCCCcEEEEEECCCHHHH-HHHHHHc-------CC-----CCcCCHHHHhcCCCCCEEE
Confidence 4899999999999999987 555 88865 779887543 2222222 21 2357999999 5699999
Q ss_pred EcCCCChh
Q 016162 242 LHPVLDKT 249 (394)
Q Consensus 242 l~lPlt~~ 249 (394)
+|+|....
T Consensus 72 i~tp~~~h 79 (354)
T 3db2_A 72 ITVPNDKH 79 (354)
T ss_dssp ECSCTTSH
T ss_pred EeCChHHH
Confidence 99995443
No 211
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.20 E-value=0.0013 Score=63.13 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=64.2
Q ss_pred CeEEEEecChHHHH-HHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh-cccCEEEEc
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~ 243 (394)
.+|||||+|.||+. +++.+++.-+.+++++|++.... +++.+.| +... .+.+..+++ .++|+|++|
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~-~~~a~~~-------g~~~----~~~~~~~~l~~~~D~V~i~ 70 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVL-GTLATRY-------RVSA----TCTDYRDVLQYGVDAVMIH 70 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHH-HHHHHHT-------TCCC----CCSSTTGGGGGCCSEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHc-------CCCc----cccCHHHHhhcCCCEEEEE
Confidence 37999999999994 88887332377888999987643 2222222 2110 022334455 789999999
Q ss_pred CCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 016162 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~l~ 292 (394)
+|...... -....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 71 tp~~~h~~-----~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 71 AATDVHST-----LAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp SCGGGHHH-----HHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCchhHHH-----HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 99322211 1122344454 56652 122334556788877766544
No 212
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.20 E-value=0.0015 Score=63.01 Aligned_cols=70 Identities=11% Similarity=0.136 Sum_probs=50.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
.+|||||+|.||+..++.+++.-++++. ++|++.... +.+.+.| +.. ..+.++++++. +.|+|++
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~-------~~~----~~~~~~~~ll~~~~~D~V~i 73 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENA-QKMAKEL-------AIP----VAYGSYEELCKDETIDIIYI 73 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHH-HHHHHHT-------TCC----CCBSSHHHHHHCTTCSEEEE
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHHc-------CCC----ceeCCHHHHhcCCCCCEEEE
Confidence 5899999999999999988433477876 678886542 2222222 211 23578999998 7999999
Q ss_pred cCCCC
Q 016162 243 HPVLD 247 (394)
Q Consensus 243 ~lPlt 247 (394)
|+|..
T Consensus 74 ~tp~~ 78 (330)
T 3e9m_A 74 PTYNQ 78 (330)
T ss_dssp CCCGG
T ss_pred cCCCH
Confidence 99944
No 213
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.11 E-value=0.0025 Score=61.74 Aligned_cols=70 Identities=21% Similarity=0.239 Sum_probs=50.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
.+|||||+|.||+..++.+++.-+++++ ++|+++... +.+.+.| +. ...+.++++++. ++|+|++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~-------~~----~~~~~~~~~ll~~~~~D~V~i 70 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRL-REMKEKL-------GV----EKAYKDPHELIEDPNVDAVLV 70 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHH-HHHHHHH-------TC----SEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHh-------CC----CceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433477876 689887543 2222222 11 113579999998 8999999
Q ss_pred cCCCC
Q 016162 243 HPVLD 247 (394)
Q Consensus 243 ~lPlt 247 (394)
|+|..
T Consensus 71 ~tp~~ 75 (344)
T 3ezy_A 71 CSSTN 75 (344)
T ss_dssp CSCGG
T ss_pred cCCCc
Confidence 99943
No 214
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=97.10 E-value=0.00013 Score=69.63 Aligned_cols=98 Identities=13% Similarity=0.060 Sum_probs=62.4
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh-cccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l~l 244 (394)
++|+|||.|.||..+|..|+ ..|.+|.+++|+.... +. ....|..+... ..+..+.+ ..+|+|++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~-~~g~~V~~~~r~~~~~-~~--------~~~~g~~~~~~--~~~~~~~~~~~~D~vilav 70 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ-QSLPHTTLIGRHAKTI-TY--------YTVPHAPAQDI--VVKGYEDVTNTFDVIIIAV 70 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHCTTCEEEESSCEEE-EE--------ESSTTSCCEEE--EEEEGGGCCSCEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHH-HCCCeEEEEEeccCcE-EE--------EecCCeeccce--ecCchHhcCCCCCEEEEeC
Confidence 58999999999999999984 5578899999975321 00 01112111111 11333444 7899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCccc
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~~v 277 (394)
|.. .+...+ +..-..+++++++|.+.-|=-.
T Consensus 71 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 71 KTH-QLDAVI-PHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp CGG-GHHHHG-GGHHHHEEEEEEEEECCSSCCC
T ss_pred Ccc-CHHHHH-HHHHHhhCCCCEEEEeccCccc
Confidence 943 444444 2333446778899998887543
No 215
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.09 E-value=0.0018 Score=63.06 Aligned_cols=71 Identities=14% Similarity=0.135 Sum_probs=49.8
Q ss_pred CCCeEEEEecChHHH-HHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCE
Q 016162 164 KGQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (394)
Q Consensus 164 ~gktvGIIGlG~IG~-~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (394)
.-.+|||||+|.||+ .+++.+++.-+++|. ++|++.... +.+.+.| + ...+.+++++++ +.|+
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g-----~~~~~~~~~ll~~~~~D~ 92 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRA-KRFTERF-------G-----GEPVEGYPALLERDDVDA 92 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHH-HHHHHHH-------C-----SEEEESHHHHHTCTTCSE
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHH-HHHHHHc-------C-----CCCcCCHHHHhcCCCCCE
Confidence 346899999999999 788887433378876 778886542 2233333 2 123478999997 5899
Q ss_pred EEEcCCCC
Q 016162 240 ISLHPVLD 247 (394)
Q Consensus 240 V~l~lPlt 247 (394)
|++|+|..
T Consensus 93 V~i~tp~~ 100 (350)
T 3rc1_A 93 VYVPLPAV 100 (350)
T ss_dssp EEECCCGG
T ss_pred EEECCCcH
Confidence 99999944
No 216
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.07 E-value=0.0015 Score=58.96 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=57.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHH-hcccCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV~ 241 (394)
+++.|+|+|.+|+.+|+.| ...|.+|+++|+++.... ...+. .+.. .......+ +++. +.++|+|+
T Consensus 1 M~iiIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~~-~l~~~-------~~~~-~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSM-LSRKYGVVIINKDRELCE-EFAKK-------LKAT-IIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECCHHHHHHHHHHH-HHTTCCEEEEESCHHHHH-HHHHH-------SSSE-EEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHHH-HHHHH-------cCCe-EEEcCCCCHHHHHhcCcccCCEEE
Confidence 3799999999999999998 678999999999876422 11111 1110 00011122 3443 67899999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+++|.+..+ ++-......+.+...+|-..+
T Consensus 71 ~~~~~d~~n--~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 71 ILTPRDEVN--LFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp ECCSCHHHH--HHHHHHHHHTSCCCEEEECCC
T ss_pred EecCCcHHH--HHHHHHHHHHcCCCeEEEEEe
Confidence 999854333 222333443334445554443
No 217
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.05 E-value=0.0026 Score=62.36 Aligned_cols=105 Identities=10% Similarity=0.103 Sum_probs=62.2
Q ss_pred CeEEEEecChHHHH-HHHHHHhcC-CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEE
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (394)
.+|||||+|.||+. .++.+ +.. +++|. ++|++.....+ .+ + +...+.++++++. +.|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~~----~~-------~----~~~~~~~~~~ll~~~~~D~V 71 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLI-RSVPGLNLAFVASRDEEKVKR----DL-------P----DVTVIASPEAAVQHPDVDLV 71 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTSTTEEEEEEECSCHHHHHH----HC-------T----TSEEESCHHHHHTCTTCSEE
T ss_pred ceEEEECCCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHHHh----hC-------C----CCcEECCHHHHhcCCCCCEE
Confidence 47999999999997 67766 444 78875 77888754221 11 1 1223579999998 78999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccCHHHHHHHHHcCCc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~a--RG~~vde~aL~~aL~~g~l 291 (394)
++|+|....... ....++.|.-++.-- --.+-+.++|+++.++..+
T Consensus 72 ~i~tp~~~H~~~-----~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 119 (364)
T 3e82_A 72 VIASPNATHAPL-----ARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQR 119 (364)
T ss_dssp EECSCGGGHHHH-----HHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred EEeCChHHHHHH-----HHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 999994333221 122233343333221 2233445556666555443
No 218
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.04 E-value=0.0014 Score=63.37 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=59.8
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
++|+|||.|.||..+|..++ ..|. +|+.+|+..... +.....+.+.+. .. ....... .+ .+.++.||+|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~-~~g~~~~V~l~D~~~~~~-~~~~~~l~~~~~-~~-~~~~i~~-~d-~~~~~~aDvViia 74 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALL-MKGFAREMVLIDVDKKRA-EGDALDLIHGTP-FT-RRANIYA-GD-YADLKGSDVVIVA 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHHH-HHHHHHHHHHGG-GS-CCCEEEE-CC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHH-HHHHHHHHhhhh-hc-CCcEEEe-CC-HHHhCCCCEEEEc
Confidence 47999999999999999874 5566 999999986432 221111111010 00 0111111 34 3567999999999
Q ss_pred CCCChh---hh--------hcccHHH---HhcCCCCcEEEEcCCCc
Q 016162 244 PVLDKT---TY--------HLINKER---LATMKKEAILVNCSRGP 275 (394)
Q Consensus 244 lPlt~~---t~--------~li~~~~---l~~mk~gailIN~aRG~ 275 (394)
+|.... ++ .++ .+. +....|++++|+++.+.
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~-~~i~~~i~~~~~~~~ii~~tNp~ 119 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVM-KEIARNVSKYAPDSIVIVVTNPV 119 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHH-HHHHHHHHHHCTTCEEEECSSSH
T ss_pred cCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCeEEEEeCCcH
Confidence 985331 00 111 222 22224788998886644
No 219
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.04 E-value=0.0042 Score=60.56 Aligned_cols=114 Identities=17% Similarity=0.123 Sum_probs=68.8
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
.+|||||+|.||+..++.++..-++++ .++|++.... +.+.+.| +... ....+.+++++++ +.|+|++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~-~~~a~~~-------~~~~-~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKA-KAFATAN-------NYPE-STKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHHT-------TCCT-TCEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHh-------CCCC-CCeeeCCHHHHhcCCCCCEEEE
Confidence 489999999999999988743346776 4788877542 2222222 2100 1123568999996 5999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcce
Q 016162 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMFR 293 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~l~g 293 (394)
|+|..... +-....++.|. +++.- ---.+-+.++|.++.++..+..
T Consensus 78 ~tp~~~h~-----~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~ 125 (362)
T 1ydw_A 78 PLPTSLHV-----EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQI 125 (362)
T ss_dssp CCCGGGHH-----HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCE
T ss_pred cCChHHHH-----HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEE
Confidence 99933221 12223455665 44432 1223345577888887765443
No 220
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.99 E-value=0.002 Score=65.22 Aligned_cols=116 Identities=13% Similarity=0.166 Sum_probs=72.0
Q ss_pred CCCeEEEEecChH--HHHHHHHHHh--c-CCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 164 KGQTVGVIGAGRI--GSAYARMMVE--G-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 164 ~gktvGIIGlG~I--G~~vA~~la~--~-~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
+..+|+|||.|.+ |..++..+++ . .| +|+.||+..... +.. ....+.+.. .........++++.++.||
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~l-e~~-~~~~~~l~~---~~~~I~~TtD~~eAl~dAD 77 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAA-QKN-EVIGNHSGN---GRWRYEAVSTLKKALSAAD 77 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHH-HHH-HHHHTTSTT---SCEEEEEESSHHHHHTTCS
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHH-HHH-HHHHHHHhc---cCCeEEEECCHHHHhcCCC
Confidence 4569999999998 5788877643 2 36 999999987542 111 111111111 2333444578999999999
Q ss_pred EEEEcCCCC-----------hhhhhcccH------------------------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 016162 239 VISLHPVLD-----------KTTYHLINK------------------------ERLATMKKEAILVNCSRGPVIDEVALV 283 (394)
Q Consensus 239 iV~l~lPlt-----------~~t~~li~~------------------------~~l~~mk~gailIN~aRG~~vde~aL~ 283 (394)
+|+++++-. |.-.++... +.+....|++++||++..--+-+.++.
T Consensus 78 fVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~ 157 (450)
T 3fef_A 78 IVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLY 157 (450)
T ss_dssp EEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHH
T ss_pred EEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHH
Confidence 999999632 223333211 223334589999999885544444444
Q ss_pred HH
Q 016162 284 EH 285 (394)
Q Consensus 284 ~a 285 (394)
+.
T Consensus 158 k~ 159 (450)
T 3fef_A 158 KV 159 (450)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 221
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.99 E-value=0.0024 Score=61.88 Aligned_cols=79 Identities=14% Similarity=0.217 Sum_probs=49.4
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+|||.|.+|..+|..++ ..|. +|..+|...... +.......+.+.... .........++ +.++.||+|+++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la-~~g~~~v~L~Di~~~~l-~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIV-QKNLGDVVLFDIVKNMP-HGKALDTSHTNVMAY-SNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHH-HHHHHHHHTHHHHHT-CCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCHHHH-HHHHHHHHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEeC
Confidence 58999999999999999885 4466 899999876432 211111111111111 11122223566 6799999999998
Q ss_pred --CCCh
Q 016162 245 --VLDK 248 (394)
Q Consensus 245 --Plt~ 248 (394)
|..+
T Consensus 81 g~p~k~ 86 (322)
T 1t2d_A 81 GFTKAP 86 (322)
T ss_dssp SCSSCT
T ss_pred CCCCCC
Confidence 5443
No 222
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.97 E-value=0.0026 Score=61.67 Aligned_cols=104 Identities=16% Similarity=0.309 Sum_probs=60.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+|||.|.+|..+|..++ ..|. +|..||+...... .......+...... .........++ +.++.||+|++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la-~~g~~~V~L~Di~~~~l~-~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLG-QKDLGDVYMFDIIEGVPQ-GKALDLNHCMALIG-SPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSTTHHH-HHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECCHHHHH-HHHHHHHhHhhccC-CCCEEEECCCH-HHHCCCCEEEEcC
Confidence 68999999999999999874 5576 8999999865422 11111111111111 11122223566 6789999999998
Q ss_pred --CCChh---------hhhccc--HHHHhcCCCCcEEEEcCC
Q 016162 245 --VLDKT---------TYHLIN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 245 --Plt~~---------t~~li~--~~~l~~mk~gailIN~aR 273 (394)
|..+. +..++. .+.+....|++++++++.
T Consensus 91 g~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 91 GVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp SCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 54222 111111 112222248889988765
No 223
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.0014 Score=66.67 Aligned_cols=101 Identities=16% Similarity=0.214 Sum_probs=58.5
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCC--ccccccCCHHHHhcc
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLRE 236 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ell~~ 236 (394)
.+..+.+++|+|+|.|.+|+.+++.|++.-|.+|++++|+..+.. +..+. .+... .......++.++++.
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~-~la~~-------~~~~~~~~D~~d~~~l~~~l~~ 88 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQ-ALAKP-------SGSKAISLDVTDDSALDKVLAD 88 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHH-HHHGG-------GTCEEEECCTTCHHHHHHHHHT
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHH-HHHHh-------cCCcEEEEecCCHHHHHHHHcC
Confidence 446788999999999999999999985333789999999875421 11110 11100 001111246677889
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
+|+|+.|+|..-.. . +.. +.+++|..+++++
T Consensus 89 ~DvVIn~tp~~~~~-~-v~~---a~l~~g~~vvd~~ 119 (467)
T 2axq_A 89 NDVVISLIPYTFHP-N-VVK---SAIRTKTDVVTSS 119 (467)
T ss_dssp SSEEEECSCGGGHH-H-HHH---HHHHHTCEEEECS
T ss_pred CCEEEECCchhhhH-H-HHH---HHHhcCCEEEEee
Confidence 99999999943211 1 111 2234566666654
No 224
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.94 E-value=0.0014 Score=62.87 Aligned_cols=115 Identities=15% Similarity=0.174 Sum_probs=64.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
++|+|||.|.||..+|..| . -|.+|.+++|+.... +...+ .+-.....+.. .......-++....+|+|++++|
T Consensus 3 mkI~IiGaGa~G~~~a~~L-~-~g~~V~~~~r~~~~~-~~l~~-~G~~~~~~~~~--~~~~~~~~~~~~~~~D~vilavK 76 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYL-S-LYHDVTVVTRRQEQA-AAIQS-EGIRLYKGGEE--FRADCSADTSINSDFDLLVVTVK 76 (307)
T ss_dssp CEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHH-HHHHH-HCEEEEETTEE--EEECCEEESSCCSCCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHH-h-cCCceEEEECCHHHH-HHHHh-CCceEecCCCe--ecccccccccccCCCCEEEEEeC
Confidence 5899999999999999998 5 789999999986432 11111 11000000000 00000000234678999999998
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 246 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
. ..+...+ +.++.+.+++ +|.+.-|=- .++.|.+.+-..++
T Consensus 77 ~-~~~~~~l--~~l~~~~~~~-ivs~~nGi~-~~e~l~~~~~~~~v 117 (307)
T 3ego_A 77 Q-HQLQSVF--SSLERIGKTN-ILFLQNGMG-HIHDLKDWHVGHSI 117 (307)
T ss_dssp G-GGHHHHH--HHTTSSCCCE-EEECCSSSH-HHHHHHTCCCSCEE
T ss_pred H-HHHHHHH--HHhhcCCCCe-EEEecCCcc-HHHHHHHhCCCCcE
Confidence 3 2344433 3344445666 888877643 23344443333333
No 225
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.92 E-value=0.0013 Score=64.58 Aligned_cols=72 Identities=21% Similarity=0.226 Sum_probs=47.3
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.++|+|+|.|.+|+.+|+.|+ . ..+|.++|+..... ++. ... ... .........++.++++++|+|+.|+
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~-~-~~~v~~~~~~~~~~-~~~-~~~---~~~---~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLK-D-EFDVYIGDVNNENL-EKV-KEF---ATP---LKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHT-T-TSEEEEEESCHHHH-HHH-TTT---SEE---EECCTTCHHHHHHHHTTCSEEEECC
T ss_pred ccEEEEECCCHHHHHHHHHHh-c-CCCeEEEEcCHHHH-HHH-hcc---CCc---EEEecCCHHHHHHHHhCCCEEEEec
Confidence 347999999999999999974 3 46888899876542 211 100 000 0011112235778899999999999
Q ss_pred CC
Q 016162 245 VL 246 (394)
Q Consensus 245 Pl 246 (394)
|.
T Consensus 86 p~ 87 (365)
T 3abi_A 86 PG 87 (365)
T ss_dssp CG
T ss_pred CC
Confidence 94
No 226
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.92 E-value=0.0028 Score=61.10 Aligned_cols=105 Identities=16% Similarity=0.239 Sum_probs=59.0
Q ss_pred CCeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
-++|+|||.|.||.++|..++. ++.-+|+.+|+.... .+.......+.....+ ...... .+..+.++.||+|+++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~-~~~~~~dl~~~~~~~~-~~~~i~--~~~~~al~~aDvViia 81 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK-AIGDAMDFNHGKVFAP-KPVDIW--HGDYDDCRDADLVVIC 81 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH-HHHHHHHHHHHTTSSS-SCCEEE--ECCGGGTTTCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcch-HHHHHhhHHHHhhhcC-CCeEEE--cCcHHHhCCCCEEEEc
Confidence 3699999999999999988743 233489999998652 2221111111100000 011111 2334668999999999
Q ss_pred CCCChh-----------hhhccc--HHHHhcCCCCcEEEEcCC
Q 016162 244 PVLDKT-----------TYHLIN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 244 lPlt~~-----------t~~li~--~~~l~~mk~gailIN~aR 273 (394)
.|.... +..++. .+.+....|++++++++.
T Consensus 82 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 82 AGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp CSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 764321 001110 112222357888999855
No 227
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.88 E-value=0.0016 Score=63.64 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=49.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcC-CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (394)
.+|||||+|.||+..++.+ +.. ++++. ++|++..... ..+.| + ...+.++++++. +.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~l~av~d~~~~~~~--~a~~~-------g-----~~~~~~~~~ll~~~~~D~V~ 70 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLA-SAADNLEVHGVFDILAEKRE--AAAQK-------G-----LKIYESYEAVLADEKVDAVL 70 (359)
T ss_dssp EEEEEECCSHHHHHHHHHH-HTSTTEEEEEEECSSHHHHH--HHHTT-------T-----CCBCSCHHHHHHCTTCCEEE
T ss_pred CcEEEECcCHHHHHHHHHH-HhCCCcEEEEEEcCCHHHHH--HHHhc-------C-----CceeCCHHHHhcCCCCCEEE
Confidence 5899999999999999987 455 78876 5788875431 11111 2 124579999997 789999
Q ss_pred EcCCCC
Q 016162 242 LHPVLD 247 (394)
Q Consensus 242 l~lPlt 247 (394)
+|+|..
T Consensus 71 i~tp~~ 76 (359)
T 3e18_A 71 IATPND 76 (359)
T ss_dssp ECSCGG
T ss_pred EcCCcH
Confidence 999943
No 228
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.86 E-value=0.0014 Score=63.31 Aligned_cols=103 Identities=15% Similarity=0.154 Sum_probs=63.9
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.+|||||+|+||+.+++.+.+.-++++ .++|++.... + + .+...+.++++++.++|+|++|+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~-----------~---~---~gv~~~~d~~~ll~~~DvViiat 66 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-----------T---K---TPVFDVADVDKHADDVDVLFLCM 66 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-----------S---S---SCEEEGGGGGGTTTTCSEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHh-----------h---c---CCCceeCCHHHHhcCCCEEEEcC
Confidence 379999999999999998743336775 4778764321 0 0 11222457778888899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-c-CH-HHHHHHHHcCC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPV-I-DE-VALVEHLKQNP 290 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~~-v-de-~aL~~aL~~g~ 290 (394)
|..... +.....++.|.-++...-..+ + +. +.|.++.+++.
T Consensus 67 p~~~h~-----~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 67 GSATDI-----PEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp CTTTHH-----HHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred CcHHHH-----HHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 843321 223345566776666544332 2 22 45666666543
No 229
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.86 E-value=0.0026 Score=61.60 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=50.2
Q ss_pred CeEEEEecChHHHHHHHHHH-hcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEEE
Q 016162 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la-~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (394)
.+|||||+|.||+..++.++ +.-++++. ++|++.... +.+.+.| +. ....+.++++++.+ .|+|+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~-~~~~~~~-------g~---~~~~~~~~~~ll~~~~~D~V~ 71 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAA-QKVVEQY-------QL---NATVYPNDDSLLADENVDAVL 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHH-HHHHHHT-------TC---CCEEESSHHHHHHCTTCCEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHh-------CC---CCeeeCCHHHHhcCCCCCEEE
Confidence 37999999999999999874 23478866 688887542 2222222 21 12245799999986 99999
Q ss_pred EcCCCC
Q 016162 242 LHPVLD 247 (394)
Q Consensus 242 l~lPlt 247 (394)
+|+|..
T Consensus 72 i~tp~~ 77 (344)
T 3mz0_A 72 VTSWGP 77 (344)
T ss_dssp ECSCGG
T ss_pred ECCCch
Confidence 999943
No 230
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.85 E-value=0.0054 Score=59.09 Aligned_cols=69 Identities=13% Similarity=0.190 Sum_probs=48.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCC---cEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFK---MNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G---~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (394)
.++||||+|.||+..++.+ +..+ +++ .++|++.... +++.+.| +.. ..+.++++++. +.|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l-~~~~~~~~~l~av~d~~~~~a-~~~a~~~-------~~~----~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVL-QTLPRSEHQVVAVAARDLSRA-KEFAQKH-------DIP----KAYGSYEELAKDPNVEV 69 (334)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTSCTTTEEEEEEECSSHHHH-HHHHHHH-------TCS----CEESSHHHHHHCTTCCE
T ss_pred cEEEEECchHHHHHHHHHH-HhCCCCCeEEEEEEcCCHHHH-HHHHHHc-------CCC----cccCCHHHHhcCCCCCE
Confidence 4899999999999999887 4443 454 4678876542 3333333 211 13579999997 6999
Q ss_pred EEEcCCCC
Q 016162 240 ISLHPVLD 247 (394)
Q Consensus 240 V~l~lPlt 247 (394)
|++++|..
T Consensus 70 V~i~tp~~ 77 (334)
T 3ohs_X 70 AYVGTQHP 77 (334)
T ss_dssp EEECCCGG
T ss_pred EEECCCcH
Confidence 99999943
No 231
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.85 E-value=0.0025 Score=65.06 Aligned_cols=128 Identities=11% Similarity=0.222 Sum_probs=76.0
Q ss_pred CCeEEEEecChHH--HHHHHHHHh--cC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 165 GQTVGVIGAGRIG--SAYARMMVE--GF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 165 gktvGIIGlG~IG--~~vA~~la~--~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
.++|+|||.|.+| .++|..+++ ++ |.+|..||+..... +...+.....+... ..........++++.++.||+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l-~~~~~~~~~~l~~~-~~~~~I~~ttD~~eal~dAD~ 80 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERL-DAILTIAKKYVEEV-GADLKFEKTMNLDDVIIDADF 80 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHH-HHHHHHHHHHHHHT-TCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHH-HHHHHHHHHHhccC-CCCcEEEEECCHHHHhCCCCE
Confidence 4689999999975 555666542 44 88999999987542 11111100001111 123333344688888999999
Q ss_pred EEEcCCCCh-----------hhhhccc----------------------------HHHHhcCCCCcEEEEcCCCcccCHH
Q 016162 240 ISLHPVLDK-----------TTYHLIN----------------------------KERLATMKKEAILVNCSRGPVIDEV 280 (394)
Q Consensus 240 V~l~lPlt~-----------~t~~li~----------------------------~~~l~~mk~gailIN~aRG~~vde~ 280 (394)
|++++|... .-.+++. .+.+....|++++||++..--+-+.
T Consensus 81 VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~ 160 (480)
T 1obb_A 81 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTT 160 (480)
T ss_dssp EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHH
T ss_pred EEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH
Confidence 999997410 0011111 1233334689999999886655556
Q ss_pred HHHHHHHcCCcceEE
Q 016162 281 ALVEHLKQNPMFRVG 295 (394)
Q Consensus 281 aL~~aL~~g~l~gaa 295 (394)
++.+ +...++.|.+
T Consensus 161 ~~~k-~p~~rviG~c 174 (480)
T 1obb_A 161 LVTR-TVPIKAVGFC 174 (480)
T ss_dssp HHHH-HSCSEEEEEC
T ss_pred HHHH-CCCCcEEecC
Confidence 6655 5555666664
No 232
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.78 E-value=0.0038 Score=60.67 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=48.3
Q ss_pred CeEEEEecChHHHH-HHHHHHhcC-CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEE
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (394)
.+|||||+|.||+. .++.+ +.. ++++. ++|+++....+ .+ + +...+.++++++.. .|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~-~~~~~~~l~av~d~~~~~~~~----~~-------~----~~~~~~~~~~ll~~~~vD~V 71 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLI-MGTPGLELAGVSSSDASKVHA----DW-------P----AIPVVSDPQMLFNDPSIDLI 71 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTSTTEEEEEEECSCHHHHHT----TC-------S----SCCEESCHHHHHHCSSCCEE
T ss_pred ceEEEECCCHHHHHHHHHHH-hhCCCcEEEEEECCCHHHHHh----hC-------C----CCceECCHHHHhcCCCCCEE
Confidence 48999999999997 77776 444 77875 77887654211 11 1 12245799999976 8999
Q ss_pred EEcCCCChh
Q 016162 241 SLHPVLDKT 249 (394)
Q Consensus 241 ~l~lPlt~~ 249 (394)
++|+|....
T Consensus 72 ~i~tp~~~H 80 (352)
T 3kux_A 72 VIPTPNDTH 80 (352)
T ss_dssp EECSCTTTH
T ss_pred EEeCChHHH
Confidence 999995543
No 233
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.78 E-value=0.24 Score=47.59 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=69.1
Q ss_pred ccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHH---HHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-...+.. .+++ ....| ..+....+++|.++++
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~---a~~~g---~~~~~~~d~~eav~~a 224 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAG-TKLGADVVVATPEGYEPDEKVIKWAEQN---AAESG---GSFELLHDPVKAVKDA 224 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHHH---HHHHT---CEEEEESCHHHHTTTC
T ss_pred CcCCcEEEEECCCcchHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHH---HHHcC---CeEEEEeCHHHHhCCC
Confidence 478999999997 89999999886 689999999987542111111 1111 01112 1223357999999999
Q ss_pred CEEEEcCC-C------Chh-----hhhcccHHHHhcCCCCcEEEEcC
Q 016162 238 DVISLHPV-L------DKT-----TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 238 DiV~l~lP-l------t~~-----t~~li~~~~l~~mk~gailIN~a 272 (394)
|+|..-.= . .++ ...-++.+.++.+||+++|.-+.
T Consensus 225 Dvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 225 DVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp SEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECS
T ss_pred CEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCC
Confidence 99977331 0 111 12456888888899999888874
No 234
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.77 E-value=0.0025 Score=62.29 Aligned_cols=67 Identities=10% Similarity=0.160 Sum_probs=47.4
Q ss_pred CeEEEEecChHHHH-HHHHHHhcC-CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc--CEE
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA--DVI 240 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a--DiV 240 (394)
.+|||||+|.||+. .++.+ ... +.++. ++|+++... +.+.+.| +. ...+.++++++.+. |+|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~-~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~V 72 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSL-LQMQDIRIVAACDSDLERA-RRVHRFI-------SD----IPVLDNVPAMLNQVPLDAV 72 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTCTTEEEEEEECSSHHHH-GGGGGTS-------CS----CCEESSHHHHHHHSCCSEE
T ss_pred ceEEEECCCHHHHHHHHHHH-HhCCCcEEEEEEcCCHHHH-HHHHHhc-------CC----CcccCCHHHHhcCCCCCEE
Confidence 58999999999996 88887 444 78876 789987643 1111111 11 12357999999865 999
Q ss_pred EEcCC
Q 016162 241 SLHPV 245 (394)
Q Consensus 241 ~l~lP 245 (394)
++|+|
T Consensus 73 ~i~tp 77 (359)
T 3m2t_A 73 VMAGP 77 (359)
T ss_dssp EECSC
T ss_pred EEcCC
Confidence 99999
No 235
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.75 E-value=0.0026 Score=59.16 Aligned_cols=101 Identities=20% Similarity=0.226 Sum_probs=64.7
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCch-------------------hhHHHHHHHhhhhhhhhcC-C
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-------------------ATRLEKFVTAYGQFLKANG-E 219 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~-~ 219 (394)
..|.+++|.|||.|.+|..+|+.| ...|. ++.++|+.. .+. +...+. +...+ .
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~L-a~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka-~~~~~~----l~~~np~ 100 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYL-ASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV-ESARDA----LTRINPH 100 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH-HHHHHH----HHHHCTT
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHH-HHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH-HHHHHH----HHHHCCC
Confidence 468999999999999999999998 46676 899999876 221 111111 11111 0
Q ss_pred CCccc-c-cc--CCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016162 220 QPVTW-K-RA--SSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (394)
Q Consensus 220 ~~~~~-~-~~--~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~ 271 (394)
..+.. . .. .++++++.++|+|+.+++ +.+++.++++..... +..+|+.
T Consensus 101 ~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 101 IAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp SEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred cEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 00100 0 01 135678899999999997 678888887665543 3445554
No 236
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.74 E-value=0.0044 Score=62.07 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=62.0
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCH---HHH-hcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV-LREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~el-l~~aDiV 240 (394)
+.+|.|+|+|++|+.+|+.| ...|.+|++.|+++..... ++..|...+ .....+. +++ +.+||+|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L-~~~g~~vvvId~d~~~v~~---------~~~~g~~vi-~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLL-LSSGVKMVVLDHDPDHIET---------LRKFGMKVF-YGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEECCHHHHHH---------HHHTTCCCE-ESCTTCHHHHHHTTTTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHHHH---------HHhCCCeEE-EcCCCCHHHHHhcCCCccCEE
Confidence 45799999999999999998 7889999999998765321 122232111 1122333 333 6789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+++++....+. .-......+.|...+|--++
T Consensus 73 iv~~~~~~~n~--~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 73 INAIDDPQTNL--QLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp EECCSSHHHHH--HHHHHHHHHCTTCEEEEEES
T ss_pred EECCCChHHHH--HHHHHHHHhCCCCeEEEEEC
Confidence 99998543333 22445555667756655444
No 237
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.73 E-value=0.0029 Score=63.61 Aligned_cols=112 Identities=11% Similarity=0.108 Sum_probs=64.4
Q ss_pred CeEEEEecChHHH-HHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEE
Q 016162 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~-~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (394)
.+|||||+|.||+ .+++.+++.-++++ .++|++.... +.+.+.| +........+.++++++. +.|+|+
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~-------g~~~~~~~~~~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKA-KIVAAEY-------GVDPRKIYDYSNFDKIAKDPKIDAVY 155 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHH-HHHHHHT-------TCCGGGEECSSSGGGGGGCTTCCEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHh-------CCCcccccccCCHHHHhcCCCCCEEE
Confidence 4899999999997 88888632236775 5789887542 2222222 211101113568899987 799999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNP 290 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~ 290 (394)
+|+|...... -....++.|. +++.- ---.+-+.++|.++.++..
T Consensus 156 iatp~~~h~~-----~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g 201 (433)
T 1h6d_A 156 IILPNSLHAE-----FAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAAN 201 (433)
T ss_dssp ECSCGGGHHH-----HHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHT
T ss_pred EcCCchhHHH-----HHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhC
Confidence 9999432221 1222344454 44442 1123334456676665543
No 238
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.73 E-value=0.0033 Score=58.80 Aligned_cols=99 Identities=19% Similarity=0.231 Sum_probs=68.5
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
-+..+|+++|+|+||+.+++. . ++++ .+|+ .+ .+.. +.....|+++++.++|+|+
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~---~k---------------~gel--gv~a~~d~d~lla~pD~VV 65 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD---RI---------------SKDI--PGVVRLDEFQVPSDVSTVV 65 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH---S-CCSEEEEEC---SS---------------CCCC--SSSEECSSCCCCTTCCEEE
T ss_pred cccceEEEECcCHHHHHHHhc---C-CcEEEEEEe---cc---------------cccc--CceeeCCHHHHhhCCCEEE
Confidence 356799999999999999986 3 6654 4566 11 0111 1223467889988999999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde---~aL~~aL~~g~ 290 (394)
=|.+ ++ -+.+.....++.|.-+|-+|-|.+.|. +.|.++.++|.
T Consensus 66 e~A~--~~---av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 66 ECAS--PE---AVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp ECSC--HH---HHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred ECCC--HH---HHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 8875 22 233445566789999999999988887 55666666654
No 239
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.72 E-value=0.0015 Score=63.31 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=46.1
Q ss_pred CeEEEEecChHHHH-HHH-HHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEE
Q 016162 166 QTVGVIGAGRIGSA-YAR-MMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~-~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (394)
.+|||||+|.||+. .++ .++..-++++. ++|+++... +. ...+ . +...+.|+++++.. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~-~~-~~~~-------~----~~~~~~~~~~ll~~~~~D~V 69 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQ-APIY-------S----HIHFTSDLDEVLNDPDVKLV 69 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGG-GG-SGGG-------T----TCEEESCTHHHHTCTTEEEE
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHH-HH-HHhc-------C----CCceECCHHHHhcCCCCCEE
Confidence 47999999999997 455 33223477876 788876542 11 1111 1 12235789999986 8999
Q ss_pred EEcCCCC
Q 016162 241 SLHPVLD 247 (394)
Q Consensus 241 ~l~lPlt 247 (394)
++|+|..
T Consensus 70 ~i~tp~~ 76 (345)
T 3f4l_A 70 VVCTHAD 76 (345)
T ss_dssp EECSCGG
T ss_pred EEcCChH
Confidence 9999944
No 240
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.72 E-value=0.014 Score=58.71 Aligned_cols=116 Identities=16% Similarity=0.251 Sum_probs=72.5
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCc---------hhhHHHHHHHhhhhhhhhcCCCCccccccCCH
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (394)
.+++|+||.|.|+|++|+.+|+.| ...|++|+ +.|.+ ....+.+..+..+ ...........+.
T Consensus 231 ~~l~g~~vaVqGfGnVG~~~a~~L-~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g------~i~~y~~a~~i~~ 303 (440)
T 3aog_A 231 LQVEGARVAIQGFGNVGNAAARAF-HDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFG------GVRGYPKAEPLPA 303 (440)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTS------SSTTCTTSEECCH
T ss_pred CCccCCEEEEeccCHHHHHHHHHH-HHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcC------CcccCCCceEcCc
Confidence 478999999999999999999997 68899998 44442 1122222222211 0000000122355
Q ss_pred HHHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 231 DEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 231 ~ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
++++ ..||+++-|.. .+.|+.+....+ +..+++..+.+.+- .+|- +.|.+..+
T Consensus 304 ~ei~~~~~DIlvPcA~-----~n~i~~~na~~l-~ak~VvEgAN~p~t-~eA~-~iL~~~GI 357 (440)
T 3aog_A 304 ADFWGLPVEFLVPAAL-----EKQITEQNAWRI-RARIVAEGANGPTT-PAAD-DILLEKGV 357 (440)
T ss_dssp HHHTTCCCSEEEECSS-----SSCBCTTTGGGC-CCSEEECCSSSCBC-HHHH-HHHHHHTC
T ss_pred hhhhcCCCcEEEecCC-----cCccchhhHHHc-CCcEEEecCccccC-HHHH-HHHHHCCC
Confidence 6765 47999998865 455677666666 46688888888864 4443 44554444
No 241
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.70 E-value=0.0026 Score=59.16 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=53.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEE-EcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.+|+|+|+|+||+.+++.+ ...+-++.+ +|+..... .++..+.++++++ .+|+|+-+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l-~~~~~eLva~~d~~~~~~-------------------~gv~v~~dl~~l~-~~DVvIDft 62 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLA-EEKGHEIVGVIENTPKAT-------------------TPYQQYQHIADVK-GADVAIDFS 62 (243)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCC---------------------CCSCBCSCTTTCT-TCSEEEECS
T ss_pred eEEEEECcCHHHHHHHHHH-HhCCCEEEEEEecCcccc-------------------CCCceeCCHHHHh-CCCEEEEeC
Confidence 5899999999999999987 444337654 78765320 1122346788888 999998554
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
+ |+.. .+.+. ++.|.-+|....|-
T Consensus 63 ~--p~a~----~~~~~-l~~g~~vVigTTG~ 86 (243)
T 3qy9_A 63 N--PNLL----FPLLD-EDFHLPLVVATTGE 86 (243)
T ss_dssp C--HHHH----HHHHT-SCCCCCEEECCCSS
T ss_pred C--hHHH----HHHHH-HhcCCceEeCCCCC
Confidence 3 3322 12233 67777777777763
No 242
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.68 E-value=0.0041 Score=56.71 Aligned_cols=91 Identities=10% Similarity=0.161 Sum_probs=56.5
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHH-hcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (394)
.+++.|+|+|.+|+.+|+.| ...|. |+++|+++..... +. .+. ........+ +++. +.++|.|
T Consensus 9 ~~~viI~G~G~~G~~la~~L-~~~g~-v~vid~~~~~~~~---------~~-~~~-~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 9 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRKKV---------LR-SGA-NFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHS-TTSEE-EEEESCGGGHHHH---------HH-TTC-EEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCEEEEECCChHHHHHHHHH-HhCCe-EEEEECCHHHHHH---------Hh-cCC-eEEEcCCCCHHHHHhcCcchhcEE
Confidence 45899999999999999997 68888 9999998754211 11 111 111111223 3333 7889999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEE
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVN 270 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN 270 (394)
++++|.+.. .+.-......+.++..+|-
T Consensus 76 i~~~~~d~~--n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 76 IVDLESDSE--TIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp EECCSCHHH--HHHHHHHHHHHCSSSEEEE
T ss_pred EEcCCCcHH--HHHHHHHHHHHCCCCeEEE
Confidence 999985432 3333444555667644443
No 243
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.68 E-value=0.065 Score=51.32 Aligned_cols=93 Identities=24% Similarity=0.333 Sum_probs=65.7
Q ss_pred ccCCCeEEEEecC---hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 162 LLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 162 ~l~gktvGIIGlG---~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
.+.|.||+++|=| ++..+.+..+ ..||++|.+..|..-.. + ....+ ...+++|.++.+|
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~-~--------------~~~~g--~~~d~~eav~~aD 205 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVL-TRLGARVLFSGPSEWQD-E--------------ENTFG--TYVSMDEAVESSD 205 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGSC-T--------------TCSSC--EECCHHHHHHHCS
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHH-HHcCCEEEEECCCccCc-c--------------hhhcC--ccCCHHHHhCCCC
Confidence 4789999999975 6999999986 68999999988743210 0 00111 2458999999999
Q ss_pred EEEEcCCCCh--------h---hhhcccHHHHhcCCCCcEEEEcC
Q 016162 239 VISLHPVLDK--------T---TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 239 iV~l~lPlt~--------~---t~~li~~~~l~~mk~gailIN~a 272 (394)
+|..-.-... . ...-++.+.++.+|++++|.-|.
T Consensus 206 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 206 VVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp EEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred EEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 9987421111 1 12447888888899999888774
No 244
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.67 E-value=0.0041 Score=60.71 Aligned_cols=72 Identities=15% Similarity=0.299 Sum_probs=51.0
Q ss_pred CCeEEEEecChHHHHHHHHHH-hcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la-~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (394)
-.+|||||+|.||+..++.++ +.-++++. ++|++.... +.+.+.| +. ....+.++++++. +.|+|
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~~-------g~---~~~~~~~~~~ll~~~~~D~V 91 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRA-QAALDKY-------AI---EAKDYNDYHDLINDKDVEVV 91 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHH-HHHHHHH-------TC---CCEEESSHHHHHHCTTCCEE
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHH-HHHHHHh-------CC---CCeeeCCHHHHhcCCCCCEE
Confidence 458999999999999999874 23478866 689887543 2233333 11 1224579999997 48999
Q ss_pred EEcCCCC
Q 016162 241 SLHPVLD 247 (394)
Q Consensus 241 ~l~lPlt 247 (394)
++|+|..
T Consensus 92 ~i~tp~~ 98 (357)
T 3ec7_A 92 IITASNE 98 (357)
T ss_dssp EECSCGG
T ss_pred EEcCCcH
Confidence 9999943
No 245
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.67 E-value=0.0054 Score=58.66 Aligned_cols=126 Identities=17% Similarity=0.248 Sum_probs=71.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
++|+|||.|.+|..+|..|+ ..|. +|..||+..........+ ..+...... .........+ .+.++.||+|+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~-~~~~~~~v~L~D~~~~~~~g~~~d-l~~~~~~~~-~~~~i~~t~d-~~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCL-LNLDVDEIALVDIAEDLAVGEAMD-LAHAAAGID-KYPKIVGGAD-YSLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHSCCSEEEEECSSHHHHHHHHHH-HHHHHHTTT-CCCEEEEESC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECChHHHHHHHHH-HHhhhhhcC-CCCEEEEeCC-HHHhCCCCEEEEC
Confidence 47999999999999998874 4455 999999987542211111 000000000 1122222346 7889999999998
Q ss_pred CCCC--hh-hh-hcc--cH-------HHHhcCCCCcEEEEcCCCcccCHHHHHHHHH----cCCcceEE--ee
Q 016162 244 PVLD--KT-TY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALVEHLK----QNPMFRVG--LD 297 (394)
Q Consensus 244 lPlt--~~-t~-~li--~~-------~~l~~mk~gailIN~aRG~~vde~aL~~aL~----~g~l~gaa--lD 297 (394)
.+.. +. ++ .++ |. +.+....|++++++++ .++|.-..+-.-. ..++.|.+ ||
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHHHHHHHhcCCCHHHEeecccccH
Confidence 7532 21 11 111 11 2345557899999998 4555443332111 23566664 55
No 246
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.67 E-value=0.012 Score=56.16 Aligned_cols=106 Identities=17% Similarity=0.208 Sum_probs=59.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
..++|+|||.|.||..+|..| ...|. +|+.+|++.........+ ..+...-.+ ........+. +.+..||+|+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l-~~~g~~~~V~l~d~~~~~~~~~~~~-~~~~~~~~~--~~~v~~~~~~-~~~~~aD~Vi 80 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAA-AQRGIAREIVLEDIAKERVEAEVLD-MQHGSSFYP--TVSIDGSDDP-EICRDADMVV 80 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHH-HHTTCCSEEEEECSSHHHHHHHHHH-HHHTGGGST--TCEEEEESCG-GGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HhCCCCCEEEEEeCChhHHHHHHHH-HHhhhhhcC--CeEEEeCCCH-HHhCCCCEEE
Confidence 346899999999999999987 45577 999999986432110111 000000000 1111111243 4678999999
Q ss_pred EcCCCChhhh------------hccc--HHHHhcCCCCcEEEEcCCCc
Q 016162 242 LHPVLDKTTY------------HLIN--KERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 242 l~lPlt~~t~------------~li~--~~~l~~mk~gailIN~aRG~ 275 (394)
++++... .. .++. .+.+....+++++|+++.|-
T Consensus 81 i~v~~~~-~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 81 ITAGPRQ-KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp ECCCCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred ECCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 9995321 11 1110 11222236788999987654
No 247
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.66 E-value=0.0038 Score=61.54 Aligned_cols=39 Identities=26% Similarity=0.490 Sum_probs=35.1
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
.-+.||||+|||.|.+|+.+++.+ +.+|++|+++|+++.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa-~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAA-KEMGYKIAVLDPTKN 48 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCCC
Confidence 357899999999999999999996 899999999998753
No 248
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.65 E-value=0.16 Score=49.27 Aligned_cols=107 Identities=13% Similarity=0.095 Sum_probs=70.0
Q ss_pred ccCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 162 ~l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
.+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+...+..-......| ..+....++++.++.+|+
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 227 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAA-ALTGLDLRLVAPQACWPEAALVTECRALAQQNG---GNITLTEDVAKGVEGADF 227 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHH-HHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTT---CEEEEESCHHHHHTTCSE
T ss_pred CCCCcEEEEECCCccchHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhCCCCE
Confidence 5889999999986 9999999986 578999999988543211111110000011122 123335799999999999
Q ss_pred EEEcCC-CC-------hh-----hhhcccHHHHhcC-CCCcEEEEcC
Q 016162 240 ISLHPV-LD-------KT-----TYHLINKERLATM-KKEAILVNCS 272 (394)
Q Consensus 240 V~l~lP-lt-------~~-----t~~li~~~~l~~m-k~gailIN~a 272 (394)
|..-.= .- .+ ...-++.+.++.+ ||+++|.-|.
T Consensus 228 vytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 228 IYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp EEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred EEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCC
Confidence 976322 10 11 1245788999999 9999998874
No 249
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.58 E-value=0.0067 Score=58.85 Aligned_cols=106 Identities=20% Similarity=0.262 Sum_probs=60.8
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCC--CCccccccCCHHHHhcccCE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDi 239 (394)
.+++|+|||.|.||..+|..++ ..|. ++..+|...........+ +.+... ..... ..+..+.++.||+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k~~g~a~D-----L~~~~~~~~~~~i--~~~~~~a~~~aDi 79 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMV-LQGIAQEIGIVDIFKDKTKGDAID-----LEDALPFTSPKKI--YSAEYSDAKDADL 79 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHHHHHHHHH-----HHTTGGGSCCCEE--EECCGGGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHHHHHHhh-----HhhhhhhcCCcEE--EECcHHHhcCCCE
Confidence 5679999999999999998874 4444 899999976532211111 111100 01111 1233567999999
Q ss_pred EEEcCCC--Ch-hhh-hcc--c-------HHHHhcCCCCcEEEEcCCCcccCH
Q 016162 240 ISLHPVL--DK-TTY-HLI--N-------KERLATMKKEAILVNCSRGPVIDE 279 (394)
Q Consensus 240 V~l~lPl--t~-~t~-~li--~-------~~~l~~mk~gailIN~aRG~~vde 279 (394)
|+++... .| .++ .++ | .+.+....|++++++++. ++|.
T Consensus 80 Vvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN--Pvdi 130 (326)
T 3vku_A 80 VVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN--PVDI 130 (326)
T ss_dssp EEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS--SHHH
T ss_pred EEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC--chHH
Confidence 9998642 22 112 122 1 123444568999999974 4443
No 250
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.56 E-value=0.0074 Score=58.13 Aligned_cols=107 Identities=12% Similarity=0.116 Sum_probs=64.1
Q ss_pred CeEEEEecChHHH-HHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEE
Q 016162 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~-~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~ 241 (394)
.+|||||+|.+|. .+++.+ +.-+.++ .++|+++... +.+.+.| +. ...+.+++++++ +.|+|+
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l-~~~~~~lvav~d~~~~~~-~~~a~~~-------~~----~~~~~~~~~ll~~~~~D~V~ 71 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQL-IDAGAELAGVFESDSDNR-AKFTSLF-------PS----VPFAASAEQLITDASIDLIA 71 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHH-HHTTCEEEEEECSCTTSC-HHHHHHS-------TT----CCBCSCHHHHHTCTTCCEEE
T ss_pred cEEEEECCChHHHHHhhhhh-cCCCcEEEEEeCCCHHHH-HHHHHhc-------CC----CcccCCHHHHhhCCCCCEEE
Confidence 4899999999996 677776 4558885 5788887542 2222222 11 123578999997 689999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNP 290 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~ 290 (394)
+|+|..... +-....++.|. +++.- -.-.+-+.++|.++.++..
T Consensus 72 i~tp~~~h~-----~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g 117 (336)
T 2p2s_A 72 CAVIPCDRA-----ELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETG 117 (336)
T ss_dssp ECSCGGGHH-----HHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHC
T ss_pred EeCChhhHH-----HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 999943322 12223344454 45542 1223344556666665543
No 251
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.56 E-value=0.0032 Score=60.78 Aligned_cols=121 Identities=15% Similarity=0.142 Sum_probs=63.7
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCC--CCccccccCCHHHHhcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDiV 240 (394)
..+|+|||.|.+|..+|..++ ..|. +|..+|...... +.....+ .+... ...... ..+ .+.++.||+|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~-~~~~~~ev~L~Di~~~~~-~g~~~dl----~~~~~~~~~~~i~-~~~-~~a~~~aDvV 78 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMA-LRQTANELVLIDVFKEKA-IGEAMDI----NHGLPFMGQMSLY-AGD-YSDVKDCDVI 78 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCSSEEEEECCC---C-CHHHHHH----TTSCCCTTCEEEC---C-GGGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChHHH-HHHHHHH----HHhHHhcCCeEEE-ECC-HHHhCCCCEE
Confidence 358999999999999998874 4455 999999875431 1111111 11100 111111 123 4569999999
Q ss_pred EEcCCCChhhhhc-------cc-------HHHHhcCCCCcEEEEcCCCcccCHHHHHHH--HHcCCcceE
Q 016162 241 SLHPVLDKTTYHL-------IN-------KERLATMKKEAILVNCSRGPVIDEVALVEH--LKQNPMFRV 294 (394)
Q Consensus 241 ~l~lPlt~~t~~l-------i~-------~~~l~~mk~gailIN~aRG~~vde~aL~~a--L~~g~l~ga 294 (394)
+++.+. +...+. .| .+.+....|++++++++..-=+....+.+. +...++.|.
T Consensus 79 ii~~g~-p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 79 VVTAGA-NRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp EECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred EEcCCC-CCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEecc
Confidence 999873 332221 01 112222368999999754222223333332 233356666
No 252
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.54 E-value=0.0067 Score=57.74 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=64.8
Q ss_pred CCeEEEEec-ChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEE
Q 016162 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (394)
Q Consensus 165 gktvGIIGl-G~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (394)
..+|+|+|+ |++|+.+++.+ ..+|++++ .+||..... + . .+...+.+++|+.. ..|++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l-~~~g~~~V~~V~p~~~g~-~--------------~--~G~~vy~sl~el~~~~~~D~v 68 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQA-IAYGTKMVGGVTPGKGGT-T--------------H--LGLPVFNTVREAVAATGATAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-E--------------E--TTEEEESSHHHHHHHHCCCEE
T ss_pred CCEEEEECCCChHHHHHHHHH-HHCCCeEEEEeCCCcccc-e--------------e--CCeeccCCHHHHhhcCCCCEE
Confidence 458999999 99999999987 56688743 566642100 0 0 11223578999988 89999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPM 291 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~l 291 (394)
++++|. +.....+ .+.++ .... .+|..+.|-. -+.+.|.++.++..+
T Consensus 69 iI~tP~-~~~~~~~-~ea~~-~Gi~-~iVi~t~G~~~~~~~~l~~~A~~~gv 116 (288)
T 2nu8_A 69 VIYVPA-PFCKDSI-LEAID-AGIK-LIITITEGIPTLDMLTVKVKLDEAGV 116 (288)
T ss_dssp EECCCG-GGHHHHH-HHHHH-TTCS-EEEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred EEecCH-HHHHHHH-HHHHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 999993 2333333 22222 1222 3455555532 344578888876544
No 253
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.54 E-value=0.063 Score=51.50 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=68.6
Q ss_pred ccCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHH---HHhhhhhhhhcCCCCccccccCCHHHHhcc
Q 016162 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 162 ~l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (394)
.+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+.. .+++ ....|. .+....+++|.++.
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~---a~~~G~---~~~~~~d~~eav~~ 217 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGG-VTAGIHVTVAAPEGFLPDPSVRAAAERR---AQDTGA---SVTVTADAHAAAAG 217 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-HHTTCEEEEECCTTSCCCHHHHHHHHHH---HHHHTC---CEEEESCHHHHHTT
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHH---HHHcCC---eEEEEECHHHHhcC
Confidence 4789999999986 9999999986 689999999987543211111 1111 011121 12335799999999
Q ss_pred cCEEEE-cCCCC------hh-----hhhcccHHHHhcCCCCcEEEEcC
Q 016162 237 ADVISL-HPVLD------KT-----TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 237 aDiV~l-~lPlt------~~-----t~~li~~~~l~~mk~gailIN~a 272 (394)
+|+|.. ....- ++ ...-++.+.++.+||+++|.-+.
T Consensus 218 aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 218 ADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred CCEEEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 999977 33110 00 12446788888888888888774
No 254
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.52 E-value=0.0035 Score=60.56 Aligned_cols=102 Identities=17% Similarity=0.219 Sum_probs=58.3
Q ss_pred CeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.+|+|||.|.+|.+++..++. +..-++..+|...... +.......+.. ... ...... .+..+.++.||+|+++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~-~g~~~dl~~~~-~~~-~~~~v~--~~~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT-KGDALDLEDAQ-AFT-APKKIY--SGEYSDCKDADLVVITA 80 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH-HHHHHHHHGGG-GGS-CCCEEE--ECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHH-HHHHHHHHHHH-Hhc-CCeEEE--ECCHHHhCCCCEEEECC
Confidence 689999999999999988743 2333899999976432 22111111111 011 111121 13356799999999998
Q ss_pred CCChhhhh------------ccc--HHHHhcCCCCcEEEEcCC
Q 016162 245 VLDKTTYH------------LIN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 245 Plt~~t~~------------li~--~~~l~~mk~gailIN~aR 273 (394)
+.. ...+ ++. .+.+....|++++++++.
T Consensus 81 g~~-~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 81 GAP-QKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp CC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 642 2221 111 122333468999999854
No 255
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.51 E-value=0.0031 Score=60.80 Aligned_cols=106 Identities=21% Similarity=0.237 Sum_probs=60.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
...+|+|||.|.+|..++..++. ++.-+|..||...... +.......+.....+ ....... +..+.++.||+|++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~v~~--~~~~a~~~aDvVvi 80 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKV-RGDVMDLKHATPYSP-TTVRVKA--GEYSDCHDADLVVI 80 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHH-HHHHHHHHHHGGGSS-SCCEEEE--CCGGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHh-hhhhhhHHhhhhhcC-CCeEEEe--CCHHHhCCCCEEEE
Confidence 34699999999999999988753 2334899999876432 211111111000000 1111221 33667999999999
Q ss_pred cCCCChh---hh--------hccc--HHHHhcCCCCcEEEEcCC
Q 016162 243 HPVLDKT---TY--------HLIN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 243 ~lPlt~~---t~--------~li~--~~~l~~mk~gailIN~aR 273 (394)
+.+.... ++ .++. .+.+....|++++++++.
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN 124 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 9864321 11 1111 122333478999999764
No 256
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.49 E-value=0.0079 Score=56.75 Aligned_cols=68 Identities=21% Similarity=0.294 Sum_probs=47.7
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
.++++.|||.|.+|+.++..| ...|+ +|++++|+.++. ++..+.+ +. .+. .++. +.++|+|+.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L-~~~G~~~i~v~nRt~~ka-~~la~~~-------~~---~~~--~~~~--~~~~DivIn 181 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAF-KNSGFEKLKIYARNVKTG-QYLAALY-------GY---AYI--NSLE--NQQADILVN 181 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHH-HHTTCCCEEEECSCHHHH-HHHHHHH-------TC---EEE--SCCT--TCCCSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHc-------CC---ccc--hhhh--cccCCEEEE
Confidence 468999999999999999997 67897 799999997542 2222222 11 111 1222 468999999
Q ss_pred cCCCC
Q 016162 243 HPVLD 247 (394)
Q Consensus 243 ~lPlt 247 (394)
++|..
T Consensus 182 aTp~g 186 (271)
T 1npy_A 182 VTSIG 186 (271)
T ss_dssp CSSTT
T ss_pred CCCCC
Confidence 99954
No 257
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=96.49 E-value=0.042 Score=54.94 Aligned_cols=117 Identities=20% Similarity=0.226 Sum_probs=73.1
Q ss_pred ccccCCCeEEEEecChHHHHHHHHHHhc-CCcEEE-EEcCc---------hhhHHHHHHHhhhhhhhhcCCCCccccccC
Q 016162 160 GNLLKGQTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRAS 228 (394)
Q Consensus 160 g~~l~gktvGIIGlG~IG~~vA~~la~~-~G~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (394)
|.++.|+++.|.|+|++|+..|+.| .. .|++|+ +.|.+ ....+.++.+..+ ...........
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L-~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g------~l~~y~~a~~~ 276 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLI-SQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHG------TVVTYPKGERI 276 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSS------CSTTCSSSEEE
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHH-HHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhC------CcccCCCceEc
Confidence 3579999999999999999999987 56 899998 44442 1112222222110 00000000122
Q ss_pred CHHHHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 229 SMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 229 ~l~ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
+.++++ ..||+++-|.. .+.++.+....+ +..+++-.+.+.+- .++- +.|.+..+
T Consensus 277 ~~~eil~~~~DIliP~A~-----~n~i~~~~a~~l-~ak~V~EgAN~p~t-~~a~-~~l~~~Gi 332 (415)
T 2tmg_A 277 TNEELLELDVDILVPAAL-----EGAIHAGNAERI-KAKAVVEGANGPTT-PEAD-EILSRRGI 332 (415)
T ss_dssp CHHHHTTCSCSEEEECSS-----TTSBCHHHHTTC-CCSEEECCSSSCBC-HHHH-HHHHHTTC
T ss_pred CchhhhcCCCcEEEecCC-----cCccCcccHHHc-CCeEEEeCCCcccC-HHHH-HHHHHCCC
Confidence 556665 48999998875 455778877777 46688888888864 4443 44555444
No 258
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.49 E-value=0.009 Score=57.72 Aligned_cols=70 Identities=11% Similarity=0.161 Sum_probs=48.1
Q ss_pred CeEEEEecChHHHH-HHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEEE
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (394)
.++||||+|.||+. .+..++..-+++|. ++|++++.. +++.+.|+ .. ..+.|+++++++ .|+|+
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a-~~~a~~~g-------~~----~~y~d~~ell~~~~iDaV~ 91 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRA-REMADRFS-------VP----HAFGSYEEMLASDVIDAVY 91 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHH-HHHHHHHT-------CS----EEESSHHHHHHCSSCSEEE
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHcC-------CC----eeeCCHHHHhcCCCCCEEE
Confidence 37999999999986 46665334478876 678887543 33334442 11 235799999954 79999
Q ss_pred EcCCCC
Q 016162 242 LHPVLD 247 (394)
Q Consensus 242 l~lPlt 247 (394)
+|+|..
T Consensus 92 I~tP~~ 97 (350)
T 4had_A 92 IPLPTS 97 (350)
T ss_dssp ECSCGG
T ss_pred EeCCCc
Confidence 999943
No 259
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.49 E-value=0.053 Score=51.86 Aligned_cols=100 Identities=16% Similarity=0.225 Sum_probs=68.4
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.+.|.+|+++|= |++..+.+..+ ..| |++|.+..|..-.-.+.. ++..| ..+....+++|.++.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~-------~~~~g---~~~~~~~d~~eav~~a 214 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRIL-TRFRPKLVYLISPQLLRARKEI-------LDELN---YPVKEVENPFEVINEV 214 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHG-GGSCCSEEEEECCGGGCCCHHH-------HTTCC---SCEEEESCGGGTGGGC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCchhcCCHHH-------HHHcC---CeEEEeCCHHHHhcCC
Confidence 478999999997 59999999986 688 999999988543211111 11112 2233346899999999
Q ss_pred CEEEEcCCCCh-----hh------hhcccHHHHhcCCCCcEEEEcC
Q 016162 238 DVISLHPVLDK-----TT------YHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 238 DiV~l~lPlt~-----~t------~~li~~~~l~~mk~gailIN~a 272 (394)
|+|..-.=..+ +. ..-++.+.++.+||+++|.-|.
T Consensus 215 Dvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 215 DVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp SEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred CEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 99965433221 11 2446788888888888888774
No 260
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.47 E-value=0.0033 Score=61.01 Aligned_cols=103 Identities=18% Similarity=0.213 Sum_probs=58.3
Q ss_pred CCeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
..+|+|||.|.+|.+++..++. ...-++..+|...... +.......+.. ... ...... .+..+.++.||+|+++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~-~g~~~dl~~~~-~~~-~~~~i~--~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKT-KGDAIDLSNAL-PFT-SPKKIY--SAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHH-HHHHHHHHTTG-GGS-CCCEEE--ECCGGGGGGCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHh-HHHHHHHHHHH-Hhc-CCeEEE--ECCHHHhCCCCEEEEc
Confidence 4689999999999999987742 3334899999976432 22111111111 011 111121 1345679999999999
Q ss_pred CCCChhhhhc-------ccH-------HHHhcCCCCcEEEEcCC
Q 016162 244 PVLDKTTYHL-------INK-------ERLATMKKEAILVNCSR 273 (394)
Q Consensus 244 lPlt~~t~~l-------i~~-------~~l~~mk~gailIN~aR 273 (394)
.+.. ...+. .|. +.+....|++++++++.
T Consensus 84 ag~~-~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 84 AGAP-QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 8643 22211 111 12222368999999854
No 261
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.45 E-value=0.0039 Score=63.16 Aligned_cols=75 Identities=9% Similarity=0.133 Sum_probs=49.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCC-Cc--cccccCCHHHHhcccCEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-PV--TWKRASSMDEVLREADVI 240 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~l~ell~~aDiV 240 (394)
.+++++|+|.|.||+.+++.| ...|.+|.++||+.... ++..+. .+.. .. ......+++++++.+|+|
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L-~~~G~~V~v~~R~~~~a-~~la~~-------~~~~~~~~~Dv~d~~~l~~~l~~~DvV 72 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVL-TDSGIKVTVACRTLESA-KKLSAG-------VQHSTPISLDVNDDAALDAEVAKHDLV 72 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHH-HTTTCEEEEEESSHHHH-HHTTTT-------CTTEEEEECCTTCHHHHHHHHTTSSEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HhCcCEEEEEECCHHHH-HHHHHh-------cCCceEEEeecCCHHHHHHHHcCCcEE
Confidence 478999999999999999998 47889999999987542 111100 0100 00 011112456788899999
Q ss_pred EEcCCCC
Q 016162 241 SLHPVLD 247 (394)
Q Consensus 241 ~l~lPlt 247 (394)
+.++|..
T Consensus 73 In~a~~~ 79 (450)
T 1ff9_A 73 ISLIPYT 79 (450)
T ss_dssp EECCC--
T ss_pred EECCccc
Confidence 9999954
No 262
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.42 E-value=0.013 Score=56.62 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=61.0
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCch-hhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
..++|+|||.|.+|..+|..+ ...|. +|..+|+.+ ....+.......+.....+ .........+ .+.++.||+|+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l-~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~-~~~~i~~t~d-~~a~~~aDvVI 83 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLL-AQKELADVVLVDIPQLENPTKGKALDMLEASPVQG-FDANIIGTSD-YADTADSDVVV 83 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHH-HHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHT-CCCCEEEESC-GGGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhcc-CCCEEEEcCC-HHHhCCCCEEE
Confidence 467999999999999999987 45677 999999984 2222211111111000000 0111111233 35689999999
Q ss_pred EcCC--CChh-hh-hcc--c----H---HHHhcCCCCcEEEEcCC
Q 016162 242 LHPV--LDKT-TY-HLI--N----K---ERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lP--lt~~-t~-~li--~----~---~~l~~mk~gailIN~aR 273 (394)
++.. ..|. ++ .++ | . +.+....|++++++++.
T Consensus 84 iaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 84 ITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 9863 2221 11 122 1 1 12333368999999985
No 263
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.39 E-value=0.0076 Score=61.38 Aligned_cols=126 Identities=13% Similarity=0.212 Sum_probs=72.7
Q ss_pred CCeEEEEecChH-HHHHHHHHHh---cC-CcEEEEEcCchhhHHH--HHHHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQATRLE--KFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 165 gktvGIIGlG~I-G~~vA~~la~---~~-G~~V~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.++|+|||.|.. |.++|..|++ ++ +-+|..||+....... +..+.| +...+ .+.......|+++.++.|
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~---l~~~~-~~~~I~~t~D~~eal~~A 103 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVF---IREKA-PDIEFAATTDPEEAFTDV 103 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHH---HHHHC-TTSEEEEESCHHHHHSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH---hccCC-CCCEEEEECCHHHHHcCC
Confidence 469999999998 6656655443 45 6689999998754211 111111 11111 122333346888999999
Q ss_pred CEEEEcCCCChh---hh----------------------------hccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 016162 238 DVISLHPVLDKT---TY----------------------------HLIN--KERLATMKKEAILVNCSRGPVIDEVALVE 284 (394)
Q Consensus 238 DiV~l~lPlt~~---t~----------------------------~li~--~~~l~~mk~gailIN~aRG~~vde~aL~~ 284 (394)
|+|++++|.... ++ .++- .+.+....|++++||++..--+-+.++.+
T Consensus 104 D~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k 183 (472)
T 1u8x_X 104 DFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRR 183 (472)
T ss_dssp SEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHH
T ss_pred CEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHH
Confidence 999999985221 11 0110 12233345899999998755444444444
Q ss_pred HHHcCCcceE
Q 016162 285 HLKQNPMFRV 294 (394)
Q Consensus 285 aL~~g~l~ga 294 (394)
..-..++.|.
T Consensus 184 ~~p~~rViG~ 193 (472)
T 1u8x_X 184 LRPNSKILNI 193 (472)
T ss_dssp HSTTCCEEEC
T ss_pred hCCCCCEEEe
Confidence 3323355555
No 264
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.39 E-value=0.0074 Score=58.56 Aligned_cols=104 Identities=22% Similarity=0.314 Sum_probs=59.7
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
.++|+|||.|.||..+|..++ ..|. +|..+|+..........+ ..+. ...-...... ..+..+.++.||+|++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~-~~~~~~~l~l~D~~~~k~~g~a~D-L~~~-~~~~~~~v~i--~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALI-NQGITDELVVIDVNKEKAMGDVMD-LNHG-KAFAPQPVKT--SYGTYEDCKDADIVCI 79 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHHHHHHHHH-HHHT-GGGSSSCCEE--EEECGGGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEecchHHHHHHHHH-HHhc-cccccCCeEE--EeCcHHHhCCCCEEEE
Confidence 568999999999999999874 4455 899999976532211111 1000 0000001111 1222457899999999
Q ss_pred cCCC--Chh-hh-hcc--cH-------HHHhcCCCCcEEEEcCC
Q 016162 243 HPVL--DKT-TY-HLI--NK-------ERLATMKKEAILVNCSR 273 (394)
Q Consensus 243 ~lPl--t~~-t~-~li--~~-------~~l~~mk~gailIN~aR 273 (394)
+.+. .+. ++ .++ |. +.+....|++++++++.
T Consensus 80 ~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 80 CAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 8752 221 11 111 11 23334568999999975
No 265
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.37 E-value=0.0072 Score=57.99 Aligned_cols=103 Identities=15% Similarity=0.223 Sum_probs=58.5
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+|||.|.+|..+|..++ ..|. +|..+|...... +.......+...... .........+. +.++.||+|+++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la-~~g~~~v~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLA-AKELGDIVLLDIVEGVP-QGKALDLYEASPIEG-FDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCCccHH-HHHHHhHHHhHhhcC-CCeEEEECCCH-HHHCCCCEEEEcC
Confidence 58999999999999999874 5565 899999876432 221111111100001 11112222566 6689999999997
Q ss_pred CCChhhhh------------ccc--HHHHhcCCCCcEEEEcCC
Q 016162 245 VLDKTTYH------------LIN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 245 Plt~~t~~------------li~--~~~l~~mk~gailIN~aR 273 (394)
+. |...+ ++. .+.+....|++++++++.
T Consensus 79 g~-p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 120 (309)
T 1ur5_A 79 GA-PRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNN 120 (309)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCS
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCC
Confidence 52 32211 110 122333358999999754
No 266
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.35 E-value=0.095 Score=50.64 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=69.2
Q ss_pred ccCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHH---HHhhhhhhhhcCCCCccccccCCHHHHhcc
Q 016162 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 162 ~l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (394)
.+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+.. .+++ ....| ..+....+++|.+++
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~---a~~~G---~~v~~~~d~~eav~~ 236 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIAC-AKMGMNFVACGPEELKPRSDVFKRCQEI---VKETD---GSVSFTSNLEEALAG 236 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHH-HHTTCEEEEESCGGGCCCHHHHHHHHHH---HHHHC---CEEEEESCHHHHHTT
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHH---HHHcC---CeEEEEcCHHHHHcc
Confidence 4889999999986 9999999986 689999999988543211111 1111 01112 123335799999999
Q ss_pred cCEEEEc-CCC------Chh-----hhhcccHHHHhcC-CCCcEEEEcC
Q 016162 237 ADVISLH-PVL------DKT-----TYHLINKERLATM-KKEAILVNCS 272 (394)
Q Consensus 237 aDiV~l~-lPl------t~~-----t~~li~~~~l~~m-k~gailIN~a 272 (394)
+|+|..- ... .++ ...-++++.++.+ |++++|.-+.
T Consensus 237 aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 237 ADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCL 285 (325)
T ss_dssp CSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred CCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCC
Confidence 9999763 310 011 1245688888888 8899888874
No 267
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.35 E-value=0.0035 Score=60.20 Aligned_cols=99 Identities=12% Similarity=0.171 Sum_probs=56.6
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
.++|+|||.|.+|..+|..++ .-|. +|..+|.... ......+ .. +..... .....++ +.++.||+|++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~-~~g~~~ev~L~Di~~~-~~g~a~d-l~----~~~~~~--i~~t~d~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAIS-AKGIADRLVLLDLSEG-TKGATMD-LE----IFNLPN--VEISKDL-SASAHSKVVIF 83 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECCC------CHHH-HH----HHTCTT--EEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCCCEEEEEcCCcc-hHHHHHH-Hh----hhcCCC--eEEeCCH-HHHCCCCEEEE
Confidence 479999999999999998874 3455 9999999864 2211111 11 111111 1223566 56899999999
Q ss_pred cCCCC----------hhhhhccc--HHHHhcCCCCcEEEEcCC
Q 016162 243 HPVLD----------KTTYHLIN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 243 ~lPlt----------~~t~~li~--~~~l~~mk~gailIN~aR 273 (394)
+.... .++..++. .+.+....|++++++++.
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 97321 11111111 112222248999999877
No 268
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.33 E-value=0.013 Score=59.25 Aligned_cols=103 Identities=16% Similarity=0.207 Sum_probs=71.2
Q ss_pred ccccCCCeEEEEecC----------hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC
Q 016162 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (394)
Q Consensus 160 g~~l~gktvGIIGlG----------~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
+..+.|++|+|+|+. .-...+++.| ...|++|.+|||....... ..| . ......+
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L-~~~g~~v~~~DP~~~~~~~---~~~-------~----~~~~~~~ 381 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAAL-QDAGATVKAYDPEGVEQAS---KML-------T----DVEFVEN 381 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHH-HHTSCEEEEECSSCHHHHG---GGC-------S----SCCBCSC
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCCHhHH---Hhc-------C----CceEecC
Confidence 457899999999997 6678999998 7899999999998753211 111 0 1123468
Q ss_pred HHHHhcccCEEEEcCCCChhhhhcccHHHH-hcCCCCcEEEEcCCCcccCHHHH
Q 016162 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVAL 282 (394)
Q Consensus 230 l~ell~~aDiV~l~lPlt~~t~~li~~~~l-~~mk~gailIN~aRG~~vde~aL 282 (394)
+++.++.+|.|+++++ .++-+. ++-+.+ +.|+ +.+++|+ |+ +.|.+.+
T Consensus 382 ~~~~~~~ad~vvi~t~-~~~f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 382 PYAAADGADALVIVTE-WDAFRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp HHHHHTTBSEEEECSC-CTTTTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred hhHHhcCCCEEEEeeC-CHHhhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 8999999999999987 333322 455554 4465 4678885 53 4565544
No 269
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.33 E-value=0.039 Score=53.57 Aligned_cols=107 Identities=13% Similarity=0.160 Sum_probs=70.1
Q ss_pred ccCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 162 ~l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
.+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+...+..-......| ..+....++++.++.+|+
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 227 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIG-AKLGMDVRIAAPKALWPHDEFVAQCKKFAEESG---AKLTLTEDPKEAVKGVDF 227 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHH-HHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHTTTCSE
T ss_pred CcCCeEEEEecCCccchHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhCCCCE
Confidence 5889999999986 9999999986 689999999988543211111110000001112 122335799999999999
Q ss_pred EEEcCC-C-------Chh-----hhhcccHHHHhcC-CCCcEEEEcC
Q 016162 240 ISLHPV-L-------DKT-----TYHLINKERLATM-KKEAILVNCS 272 (394)
Q Consensus 240 V~l~lP-l-------t~~-----t~~li~~~~l~~m-k~gailIN~a 272 (394)
|..-.= . ..+ ...-++.+.++.+ ||+++|.-|.
T Consensus 228 vytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 228 VHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp EEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred EEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 976322 1 011 1245788999999 9999998873
No 270
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.32 E-value=0.0091 Score=57.86 Aligned_cols=107 Identities=17% Similarity=0.294 Sum_probs=60.3
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
...++|+|||.|.+|..+|..++ ..|. +|..+|+..........+ ..+.....+ .........+. +.++.||+|+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~-~~~~~~v~L~Di~~~~~~g~~~d-l~~~~~~~~-~~~~v~~t~d~-~a~~~aDiVI 80 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAG-LKELGDVVLFDIAEGTPQGKGLD-IAESSPVDG-FDAKFTGANDY-AAIEGADVVI 80 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHH-HHHHHHHHT-CCCCEEEESSG-GGGTTCSEEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCchhHHHHHHH-HhchhhhcC-CCCEEEEeCCH-HHHCCCCEEE
Confidence 45679999999999999999874 4555 999999987542111111 000000000 11112222354 6799999999
Q ss_pred EcCCC--Chh-hh-hcc--cH-------HHHhcCCCCcEEEEcCC
Q 016162 242 LHPVL--DKT-TY-HLI--NK-------ERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPl--t~~-t~-~li--~~-------~~l~~mk~gailIN~aR 273 (394)
++.+. .+. ++ .++ |. +.+....|++++++++.
T Consensus 81 iaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 81 VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp ECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 99642 221 11 111 11 12223358999999985
No 271
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.25 E-value=0.0027 Score=57.96 Aligned_cols=68 Identities=15% Similarity=0.247 Sum_probs=43.1
Q ss_pred CeEEEEecChHHHHHHHH-HHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARM-MVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~-la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.+++|||.|++|+.+++. .....|+++. ++|.++..... . ..+..+....++++++++.|+|+++
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~-----------~--i~gv~V~~~~dl~eli~~~D~ViIA 152 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGT-----------E--VGGVPVYNLDDLEQHVKDESVAILT 152 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTC-----------E--ETTEEEEEGGGHHHHCSSCCEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHh-----------H--hcCCeeechhhHHHHHHhCCEEEEe
Confidence 479999999999999993 2235577655 66877654210 0 1112223356899999777999999
Q ss_pred CCC
Q 016162 244 PVL 246 (394)
Q Consensus 244 lPl 246 (394)
+|.
T Consensus 153 vPs 155 (215)
T 2vt3_A 153 VPA 155 (215)
T ss_dssp SCH
T ss_pred cCc
Confidence 993
No 272
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=96.21 E-value=0.027 Score=56.07 Aligned_cols=73 Identities=15% Similarity=0.160 Sum_probs=48.8
Q ss_pred CeEEEEecCh---HHHHHHHHHHhcCCcEEE--EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc----
Q 016162 166 QTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---- 236 (394)
Q Consensus 166 ktvGIIGlG~---IG~~vA~~la~~~G~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---- 236 (394)
.+|||||+|. ||+..+..+...-+++++ ++|+++... +++.+.| +... ...+.++++++..
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~-------g~~~--~~~~~~~~~ll~~~~~~ 107 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKA-EASGREL-------GLDP--SRVYSDFKEMAIREAKL 107 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHH-HHHHHHH-------TCCG--GGBCSCHHHHHHHHHHC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHH-HHHHHHc-------CCCc--ccccCCHHHHHhccccc
Confidence 5899999999 999988776333346765 579887643 2333333 2211 1235799999986
Q ss_pred ---cCEEEEcCCCCh
Q 016162 237 ---ADVISLHPVLDK 248 (394)
Q Consensus 237 ---aDiV~l~lPlt~ 248 (394)
.|+|++|+|...
T Consensus 108 ~~~vD~V~I~tp~~~ 122 (417)
T 3v5n_A 108 KNGIEAVAIVTPNHV 122 (417)
T ss_dssp TTCCSEEEECSCTTS
T ss_pred CCCCcEEEECCCcHH
Confidence 899999999543
No 273
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.19 E-value=0.0079 Score=56.86 Aligned_cols=97 Identities=19% Similarity=0.237 Sum_probs=58.7
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEE-EcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.+|+|+| +|+||+.+++.+...-++++.+ +|+......-. ..+ .-.|... +.....++++++.++|+|+-+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~---d~g---el~g~~~-gv~v~~dl~~ll~~~DVVIDf 80 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQ---DAG---AFLGKQT-GVALTDDIERVCAEADYLIDF 80 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTS---BTT---TTTTCCC-SCBCBCCHHHHHHHCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccc---cHH---HHhCCCC-CceecCCHHHHhcCCCEEEEc
Confidence 5899999 9999999999875566888776 68764321000 000 0001111 233357899999999999988
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
.+ |+... +..-..++.|.-+|-...|
T Consensus 81 T~--p~a~~---~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 81 TL--PEGTL---VHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp SC--HHHHH---HHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHHH---HHHHHHHHcCCCEEEECCC
Confidence 76 43221 1111223456666666666
No 274
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.18 E-value=0.012 Score=57.35 Aligned_cols=71 Identities=21% Similarity=0.324 Sum_probs=46.0
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcC--------CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGF--------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~--------G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (394)
+--+|||||+|.||+.-++.+ +.+ +++|. ++|++.... +++.+.|+ .. ..+.|+++++
T Consensus 24 kkirvgiIG~G~ig~~H~~a~-~~~~~~~~~~~~~~lvav~d~~~~~a-~~~a~~~g-------~~----~~y~d~~ell 90 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCHALAW-NAVKTVFGDVERPRLVHLAEANAGLA-EARAGEFG-------FE----KATADWRALI 90 (393)
T ss_dssp CCCEEEEECCSHHHHHHHHHH-TTHHHHHCSSCCCEEEEEECC--TTH-HHHHHHHT-------CS----EEESCHHHHH
T ss_pred CCccEEEEcCCHHHHHHHHHH-HhhhhhhccCCCcEEEEEECCCHHHH-HHHHHHhC-------CC----eecCCHHHHh
Confidence 345899999999999876654 222 55655 668876543 33334442 11 2357999999
Q ss_pred c--ccCEEEEcCCCC
Q 016162 235 R--EADVISLHPVLD 247 (394)
Q Consensus 235 ~--~aDiV~l~lPlt 247 (394)
+ +.|+|++|+|..
T Consensus 91 ~~~~iDaV~IatP~~ 105 (393)
T 4fb5_A 91 ADPEVDVVSVTTPNQ 105 (393)
T ss_dssp HCTTCCEEEECSCGG
T ss_pred cCCCCcEEEECCChH
Confidence 6 479999999943
No 275
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.17 E-value=0.008 Score=58.39 Aligned_cols=105 Identities=8% Similarity=0.060 Sum_probs=61.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
..++|+|||.|.||..+|..++ ..|. +|..+|...........+ ..+.. .... ........+.++ +++||+|+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la-~~g~~~ev~L~Di~~~~~~g~a~D-L~~~~-~~~~-~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVL-MKDLADEVALVDVMEDKLKGEMMD-LEHGS-LFLH-TAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHH-HHCCCSEEEEECSCHHHHHHHHHH-HHHHG-GGSC-CSEEEEESSSCS-CSSCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECCHHHHHHHHHH-hhhhh-hccc-CCeEEEcCCHHH-hCCCCEEE
Confidence 5689999999999999998874 4455 899999976542211111 10000 0000 111122345665 99999999
Q ss_pred EcCCC--Chh-hh-hcc--cH-------HHHhcCCCCcEEEEcCC
Q 016162 242 LHPVL--DKT-TY-HLI--NK-------ERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPl--t~~-t~-~li--~~-------~~l~~mk~gailIN~aR 273 (394)
++... .|. ++ .++ |. +.+....|++++++++.
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 98542 111 11 111 11 23334478999999975
No 276
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.17 E-value=0.019 Score=55.41 Aligned_cols=104 Identities=16% Similarity=0.218 Sum_probs=59.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
++|+|||.|.||..+|..++ ..|. +|..+|...........+ ..+.....+ ....... .+..+.++.||+|+++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~-~~~~~~el~l~D~~~~k~~g~a~D-L~~~~~~~~-~~~~v~~-~~~~~a~~~aDvVii~ 76 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVA-RQDVAKEVVMVDIKDGMPQGKALD-MRESSPIHG-FDTRVTG-TNDYGPTEDSDVCIIT 76 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCSSEEEEECSSTTHHHHHHHH-HHHHHHHHT-CCCEEEE-ESSSGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCchHHHHHHHHH-HhccccccC-CCcEEEE-CCCHHHhCCCCEEEEC
Confidence 47999999999999998874 3344 999999987542111111 100000000 0111111 1345779999999999
Q ss_pred CCCC--hh-hh-hcc--c-------HHHHhcCCCCcEEEEcCC
Q 016162 244 PVLD--KT-TY-HLI--N-------KERLATMKKEAILVNCSR 273 (394)
Q Consensus 244 lPlt--~~-t~-~li--~-------~~~l~~mk~gailIN~aR 273 (394)
.+.. |. ++ .++ | .+.+....|++++++++.
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 77 AGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp CCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred CCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 7632 11 11 111 1 123444568999999985
No 277
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.15 E-value=0.072 Score=50.98 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=70.7
Q ss_pred ccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-...+...+ ... +....+++|.++++|+|
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~-------~~~-----~~~~~d~~eav~~aDvv 217 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVA-PLAGLKVRVATPKGYEPDPGLLK-------RAN-----AFFTHDPKEAALGAHAL 217 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHH-------HHT-----CEEESCHHHHHTTCSEE
T ss_pred CcCCcEEEEECCCchhHHHHHHHH-HHcCCEEEEECCchhcCCHHHHh-------hce-----eEEECCHHHHhcCCCEE
Confidence 488999999997 88999998886 68899999998754321111111 000 22357899999999999
Q ss_pred EEc-CCCC-----hh------hhhcccHHHHhcCCCCcEEEEcC---CCcccC
Q 016162 241 SLH-PVLD-----KT------TYHLINKERLATMKKEAILVNCS---RGPVID 278 (394)
Q Consensus 241 ~l~-lPlt-----~~------t~~li~~~~l~~mk~gailIN~a---RG~~vd 278 (394)
..- ...- +. ...-++.+.++.+||+++|.-+. ||.=|+
T Consensus 218 y~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~ 270 (301)
T 2ef0_A 218 YTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETT 270 (301)
T ss_dssp EECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBC
T ss_pred EecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccC
Confidence 773 3110 11 12456889999999999998886 554444
No 278
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.15 E-value=0.006 Score=61.84 Aligned_cols=78 Identities=15% Similarity=0.173 Sum_probs=52.1
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc-cCCHHHHhccc
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR-ASSMDEVLREA 237 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ell~~a 237 (394)
..-+++|++|.|+|.|.+|.+.++.| ...|++|+++|+.......+..+ .+. +.+.. ..+ ++.+..+
T Consensus 6 ~~~~l~~~~vlVvGgG~va~~k~~~L-~~~ga~V~vi~~~~~~~~~~l~~--------~~~--i~~~~~~~~-~~~l~~~ 73 (457)
T 1pjq_A 6 IFCQLRDRDCLIVGGGDVAERKARLL-LEAGARLTVNALTFIPQFTVWAN--------EGM--LTLVEGPFD-ETLLDSC 73 (457)
T ss_dssp EEECCBTCEEEEECCSHHHHHHHHHH-HHTTBEEEEEESSCCHHHHHHHT--------TTS--CEEEESSCC-GGGGTTC
T ss_pred eEEECCCCEEEEECCCHHHHHHHHHH-HhCcCEEEEEcCCCCHHHHHHHh--------cCC--EEEEECCCC-ccccCCc
Confidence 34578999999999999999999998 68999999999976554332211 111 11211 112 2346789
Q ss_pred CEEEEcCCCChh
Q 016162 238 DVISLHPVLDKT 249 (394)
Q Consensus 238 DiV~l~lPlt~~ 249 (394)
|+|+.+. ..++
T Consensus 74 ~lVi~at-~~~~ 84 (457)
T 1pjq_A 74 WLAIAAT-DDDT 84 (457)
T ss_dssp SEEEECC-SCHH
T ss_pred cEEEEcC-CCHH
Confidence 9888864 4553
No 279
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.13 E-value=0.018 Score=58.20 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=73.8
Q ss_pred CCeEEEEecChH-HHHHHHHHHh---cC-CcEEEEEcCch--hhHHH--HHHHhhhhhhhhcCCCCccccccCCHHHHhc
Q 016162 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQ--ATRLE--KFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (394)
Q Consensus 165 gktvGIIGlG~I-G~~vA~~la~---~~-G~~V~~~d~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (394)
..+|+|||.|.. |..++..|++ ++ +-+|..||+.. ..... +....| +...+ .+.......++++.++
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~---~~~~~-~~~~i~~t~D~~eal~ 82 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRM---VEKAG-VPIEIHLTLDRRRALD 82 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHH---HHHTT-CCCEEEEESCHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHH---HhhcC-CCcEEEEeCCHHHHhC
Confidence 358999999999 8887665543 34 56899999987 43211 111111 11111 2233333468888999
Q ss_pred ccCEEEEcCCCChh---hh--------hc--------------------cc--HHHHhcCCCCcEEEEcCCCcccCHHHH
Q 016162 236 EADVISLHPVLDKT---TY--------HL--------------------IN--KERLATMKKEAILVNCSRGPVIDEVAL 282 (394)
Q Consensus 236 ~aDiV~l~lPlt~~---t~--------~l--------------------i~--~~~l~~mk~gailIN~aRG~~vde~aL 282 (394)
.||+|+++.|.... ++ ++ +. .+.+....|++++||++..--+-+.++
T Consensus 83 gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~ 162 (450)
T 1s6y_A 83 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAV 162 (450)
T ss_dssp TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH
T ss_pred CCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 99999999994321 11 11 10 122333458999999988654555555
Q ss_pred HHHHHcCCcceE
Q 016162 283 VEHLKQNPMFRV 294 (394)
Q Consensus 283 ~~aL~~g~l~ga 294 (394)
.+..-..++.|.
T Consensus 163 ~k~~p~~rViG~ 174 (450)
T 1s6y_A 163 LRYTKQEKVVGL 174 (450)
T ss_dssp HHHCCCCCEEEC
T ss_pred HHhCCCCCEEEe
Confidence 554322245554
No 280
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.12 E-value=0.0082 Score=58.52 Aligned_cols=68 Identities=10% Similarity=0.190 Sum_probs=47.8
Q ss_pred CeEEEEecChHHHH-HHHHHHhcC-CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEE
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~-G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (394)
.+|||||+|.||+. .++.+ +.. +++|. ++|++..... +.| + +...+.++++++. +.|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l-~~~~~~~l~av~d~~~~~~~----~~~-------~----~~~~~~~~~~ll~~~~vD~V 69 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLL-DVLDEYQISKIMTSRTEEVK----RDF-------P----DAEVVHELEEITNDPAIELV 69 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHH-TTCTTEEEEEEECSCHHHHH----HHC-------T----TSEEESSTHHHHTCTTCCEE
T ss_pred ceEEEEccCHHHHHHHHHHH-hhCCCeEEEEEEcCCHHHHH----hhC-------C----CCceECCHHHHhcCCCCCEE
Confidence 48999999999997 67766 444 77775 6788764421 111 1 1223578999998 78999
Q ss_pred EEcCCCChh
Q 016162 241 SLHPVLDKT 249 (394)
Q Consensus 241 ~l~lPlt~~ 249 (394)
++|+|....
T Consensus 70 ~i~tp~~~H 78 (358)
T 3gdo_A 70 IVTTPSGLH 78 (358)
T ss_dssp EECSCTTTH
T ss_pred EEcCCcHHH
Confidence 999995443
No 281
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.12 E-value=0.03 Score=54.58 Aligned_cols=102 Identities=17% Similarity=0.236 Sum_probs=64.7
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchh------------------hHHHHHHHhhhhhhhhcCCCC
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (394)
..|++++|.|||.|.+|..+|+.|+ ..|. ++..+|+..- .+.+... ..+.+..- .
T Consensus 30 ~kL~~~~VlIvGaGGlGs~va~~La-~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa----~~L~~inP-~ 103 (340)
T 3rui_A 30 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA----ASLKRIFP-L 103 (340)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHH----HHHHHHCT-T
T ss_pred HHHhCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHH----HHHHHhCC-C
Confidence 4689999999999999999999985 6666 7888887430 0111111 11121110 1
Q ss_pred ccccc---------------------cCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 222 VTWKR---------------------ASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 222 ~~~~~---------------------~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
+.... ...++++++++|+|+.|+- +.+++.+++..-.. .+.-+|+.+
T Consensus 104 v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~---~~~plI~aa 171 (340)
T 3rui_A 104 MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 171 (340)
T ss_dssp CEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHH---TTCEEEEEE
T ss_pred CEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHH---cCCcEEEee
Confidence 11111 1135678999999999986 67788888775553 345677764
No 282
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.12 E-value=0.017 Score=55.76 Aligned_cols=110 Identities=17% Similarity=0.260 Sum_probs=61.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
..++|+|||.|.+|..+|..++ ..|. +|..+|+..........+ ..+.....+ .........+ .+.++.||+|++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~-~~~~~~v~l~Di~~~~~~g~a~d-L~~~~~~~~-~~~~v~~t~d-~~a~~~aDvVIi 79 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLAL-IKQLGDVVLFDIAQGMPNGKALD-LLQTCPIEG-VDFKVRGTND-YKDLENSDVVIV 79 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHH-HHTTHHHHT-CCCCEEEESC-GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCChHHHHHHHHH-HHhhhhhcC-CCcEEEEcCC-HHHHCCCCEEEE
Confidence 3579999999999999998874 4444 999999987542111111 100000000 1111221234 467999999999
Q ss_pred cCCC--Chh-hh-hcc--cH-------HHHhcCCCCcEEEEcCCCcccCH
Q 016162 243 HPVL--DKT-TY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDE 279 (394)
Q Consensus 243 ~lPl--t~~-t~-~li--~~-------~~l~~mk~gailIN~aRG~~vde 279 (394)
+.+. .+. ++ .++ |. +.+....|++++++++. ++|.
T Consensus 80 ~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN--Pvd~ 127 (321)
T 3p7m_A 80 TAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN--PLDI 127 (321)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS--SHHH
T ss_pred cCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC--chHH
Confidence 8642 221 11 111 11 12223358899999954 4444
No 283
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.11 E-value=0.092 Score=51.03 Aligned_cols=104 Identities=17% Similarity=0.161 Sum_probs=66.3
Q ss_pred ccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHH---HHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.+.|.||+++|= +++..+.+..+ ..||++|.+..|..-...+.+ .+++ ....| ..+....+++|.++.+
T Consensus 176 ~l~glkva~vGD~~nva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~---a~~~G---~~v~~~~d~~eav~~a 248 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCHSLLLAS-AKVGMHMTVATPVGYRPNEEIVKKALAI---AKETG---AEIEILHNPELAVNEA 248 (340)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHH---HHHHC---CCEEEESCHHHHHTTC
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHH---HHHcC---CeEEEECCHHHHhCCC
Confidence 378999999986 56777777775 578999999887532111111 1111 01112 1223357899999999
Q ss_pred CEEEEcCCCCh------h-----hhhcccHHHHhcCCCCcEEEEcC
Q 016162 238 DVISLHPVLDK------T-----TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 238 DiV~l~lPlt~------~-----t~~li~~~~l~~mk~gailIN~a 272 (394)
|+|..-.=... + ...-++.+.++.+|++++|.-|.
T Consensus 249 DVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 249 DFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp SEEEECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred CEEEecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 99976432110 0 12357888999999999998875
No 284
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.11 E-value=0.011 Score=53.53 Aligned_cols=77 Identities=13% Similarity=0.160 Sum_probs=50.5
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCC-CCccccccCCHHHHhcccC
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ell~~aD 238 (394)
..+.|++|.|.|. |.||+.+++.| ...|.+|++.+|+.....+ . ...+. .........++.+.+..+|
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L-~~~G~~V~~~~R~~~~~~~-~--------~~~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSEL-KNKGHEPVAMVRNEEQGPE-L--------RERGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESSGGGHHH-H--------HHTTCSEEEECCTTSCCGGGGTTCS
T ss_pred cCcCCCeEEEECCCChHHHHHHHHH-HhCCCeEEEEECChHHHHH-H--------HhCCCceEEEcccHHHHHHHHcCCC
Confidence 5789999999997 99999999998 5779999999998764321 1 11111 0000000145677888999
Q ss_pred EEEEcCCCC
Q 016162 239 VISLHPVLD 247 (394)
Q Consensus 239 iV~l~lPlt 247 (394)
+|+.+....
T Consensus 87 ~vi~~ag~~ 95 (236)
T 3e8x_A 87 AVVFAAGSG 95 (236)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999887644
No 285
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.10 E-value=0.079 Score=51.99 Aligned_cols=106 Identities=15% Similarity=0.149 Sum_probs=68.5
Q ss_pred cCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhhH--HHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 163 LKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATR--LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 163 l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
+.|+||+++|=| ++..+.+..+ ..+|++|.+..|..-.. .+++.+..-+.....| ..+....++++.++.||
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~-~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g---~~i~~~~d~~eav~~aD 253 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGA-AFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNG---GSLRFSTDKILAAQDAD 253 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHH-HHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHS---CEEEEESCHHHHTTTCS
T ss_pred CCCCEEEEECCCCcchHHHHHHHH-HHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcC---CEEEEECCHHHHhcCCC
Confidence 889999999988 7888888876 58999999998753221 1111110000011112 12334579999999999
Q ss_pred EEEEcC----CCChh---h------hhcccHHHHhcCCCCcEEEEcC
Q 016162 239 VISLHP----VLDKT---T------YHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 239 iV~l~l----Plt~~---t------~~li~~~~l~~mk~gailIN~a 272 (394)
+|..-+ ....+ . ..-++.+.++.+|++++|.-|.
T Consensus 254 VVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 254 VIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp EEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred EEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 998632 21111 0 1347888999999999998874
No 286
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=96.09 E-value=0.036 Score=55.52 Aligned_cols=115 Identities=19% Similarity=0.258 Sum_probs=73.4
Q ss_pred ccccCCCeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCch---------hhHHHHHHHhhhhhhhhcCCC-CccccccC
Q 016162 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQ---------ATRLEKFVTAYGQFLKANGEQ-PVTWKRAS 228 (394)
Q Consensus 160 g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 228 (394)
|.+++|+||.|-|+|++|+..|+.| ...|++|+ +.|.+. ...+.+.. ...+.. ... ....
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l-~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~-------~~~g~i~~~~-a~~~ 286 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFM-HDAGAKVIGISDANGGLYNPDGLDIPYLLDKR-------DSFGMVTNLF-TDVI 286 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHH-HHHTCEEEEEECSSCEEECTTCCCHHHHHHHC-------CSSSCCGGGC-SCCB
T ss_pred CCCcccCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHH-------HHhCCCCCCC-cEEe
Confidence 3579999999999999999999997 68899986 455541 11111111 111110 000 1123
Q ss_pred CHHHHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 229 SMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 229 ~l~ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
+.++++ ..||+++=|.. .+.|+.+....+ +-.+++..+.+.+- .+| .+.|++..+
T Consensus 287 ~~~~i~~~~~DIliPcA~-----~n~I~~~~a~~l-~ak~V~EgAN~p~t-~eA-~~iL~~rGI 342 (424)
T 3k92_A 287 TNEELLEKDCDILVPAAI-----SNQITAKNAHNI-QASIVVERANGPTT-IDA-TKILNERGV 342 (424)
T ss_dssp CHHHHHHSCCSEEEECSC-----SSCBCTTTGGGC-CCSEEECCSSSCBC-HHH-HHHHHHTTC
T ss_pred cCccceeccccEEeecCc-----ccccChhhHhhc-CceEEEcCCCCCCC-HHH-HHHHHHCCC
Confidence 556654 57999988865 567888777777 46688888998863 333 456666554
No 287
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=96.07 E-value=0.022 Score=57.15 Aligned_cols=117 Identities=17% Similarity=0.209 Sum_probs=65.9
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCch--------------hhHHHHHHHhhhhhhhhcCCCCcccc
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQ--------------ATRLEKFVTAYGQFLKANGEQPVTWK 225 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (394)
.++.|++|.|.|+|++|+.+|+.| ...|++|+ +.|.+. ...+.+..+..+. +. +... .
T Consensus 208 ~~l~g~~vaVqG~GnVG~~~a~~L-~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~-i~--~~~~--a- 280 (421)
T 2yfq_A 208 IKMEDAKIAVQGFGNVGTFTVKNI-ERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKT-LI--GFPG--A- 280 (421)
T ss_dssp CCGGGSCEEEECCSHHHHHHHHHH-HHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCC-cc--cCCC--c-
Confidence 478999999999999999999997 68999998 445551 0122222221110 00 0000 0
Q ss_pred ccCCHHHHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 226 RASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 226 ~~~~l~ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
...+.++++ ..||+++-|.+ .+.|+.+....+ +..+++..+.|.+- .++ .+.|++..+.
T Consensus 281 ~~i~~~~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t-~ea-~~il~~~GI~ 340 (421)
T 2yfq_A 281 ERITDEEFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT-PEG-DKVLTERGIN 340 (421)
T ss_dssp --------------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC-HHH-HHHHHHHTCE
T ss_pred eEeCccchhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC-HHH-HHHHHHCCCE
Confidence 111223443 46999998865 556888887777 47788888888864 333 3445544443
No 288
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.06 E-value=0.018 Score=58.17 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=67.3
Q ss_pred ccccCCCeEEEEecC----------hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC
Q 016162 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (394)
Q Consensus 160 g~~l~gktvGIIGlG----------~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
+..+.|++|+|+|+- .=...+++.| ...|++|.+|||....... ..|+. ......+
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~---~~~~~----------~~~~~~~ 378 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKL-LEVGCRVRVYDPVAMKEAQ---KRLGD----------KVEYTTD 378 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSCHHHHH---HHHGG----------GSEECSS
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCcHHHH---HhcCc----------cceecCC
Confidence 356899999999984 3467889998 7899999999998753211 12210 0123468
Q ss_pred HHHHhcccCEEEEcCCCChhhhhcccHHHH-hcCCCCcEEEEcCCCc
Q 016162 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGP 275 (394)
Q Consensus 230 l~ell~~aDiV~l~lPlt~~t~~li~~~~l-~~mk~gailIN~aRG~ 275 (394)
+++.++.+|.|+++++ .++-+. ++-+.+ +.|+ +.+++|. |+-
T Consensus 379 ~~~~~~~ad~~vi~t~-~~~f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 379 MYDAVRGAEALFHVTE-WKEFRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp HHHHTTTCSCEEECSC-CGGGSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred HHHHhcCCCEEEEccC-CHHHhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 8999999999999987 334333 354444 4465 6689995 543
No 289
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.06 E-value=0.014 Score=56.97 Aligned_cols=76 Identities=24% Similarity=0.308 Sum_probs=49.2
Q ss_pred cCCCeEEEEec-ChHHHHHHHHHHhcCC--cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 163 LKGQTVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 163 l~gktvGIIGl-G~IG~~vA~~la~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
+.+++|+|||. |.+|+.+|..+ ...| -+|..+|...........+ +.+............+..+.++.||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l-~~~g~~~evvLiDi~~~k~~g~a~D-----L~~~~~~~~~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTA-AMMRLTPNLCLYDPFAVGLEGVAEE-----IRHCGFEGLNLTFTSDIKEALTDAKY 79 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHH-HHTTCCSCEEEECSCHHHHHHHHHH-----HHHHCCTTCCCEEESCHHHHHTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHH-HhcCCCCEEEEEeCCchhHHHHHHh-----hhhCcCCCCceEEcCCHHHHhCCCCE
Confidence 45789999998 99999999776 3455 4899999976432111111 11111111112223578888999999
Q ss_pred EEEcC
Q 016162 240 ISLHP 244 (394)
Q Consensus 240 V~l~l 244 (394)
|+++.
T Consensus 80 Vvita 84 (343)
T 3fi9_A 80 IVSSG 84 (343)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99985
No 290
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.05 E-value=0.01 Score=56.47 Aligned_cols=104 Identities=17% Similarity=0.123 Sum_probs=65.4
Q ss_pred CCeEEEEec-ChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEE
Q 016162 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (394)
Q Consensus 165 gktvGIIGl-G~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (394)
.++|.|+|+ |++|+.+++.+ +..|++++ .++|.... ....+...+.+++|+.. ..|++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l-~~~g~~~v~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~~~Dv~ 68 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQM-LTYGTKIVAGVTPGKGG-----------------MEVLGVPVYDTVKEAVAHHEVDAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHSCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHH-HHcCCeEEEEECCCCCC-----------------ceECCEEeeCCHHHHhhcCCCCEE
Confidence 468999999 99999999987 56788843 66664311 00012234578999988 89999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCc-EEEEcCCCcc-cCHHHHHHHHHcCCc
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEA-ILVNCSRGPV-IDEVALVEHLKQNPM 291 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~ga-ilIN~aRG~~-vde~aL~~aL~~g~l 291 (394)
++++|. +.+...+. +..+ .|. .+|..+.|-. -+++.|.++.++..+
T Consensus 69 Ii~vp~-~~~~~~~~-ea~~---~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi 116 (288)
T 1oi7_A 69 IIFVPA-PAAADAAL-EAAH---AGIPLIVLITEGIPTLDMVRAVEEIKALGS 116 (288)
T ss_dssp EECCCH-HHHHHHHH-HHHH---TTCSEEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred EEecCH-HHHHHHHH-HHHH---CCCCEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 999992 23333332 2222 222 2555665532 345578887776544
No 291
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.05 E-value=0.0088 Score=56.44 Aligned_cols=101 Identities=20% Similarity=0.183 Sum_probs=59.7
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
.++.|+++.|+|.|-.+++++-.| ...|+ +|++++|+.++.. +..+.+.. .. ....+ ....+.+.++|+
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL-~~~g~~~i~i~nRt~~ra~-~la~~~~~----~~-~~~~~---~~~~~~~~~~dl 190 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYAL-AEAGIASITLCDPSTARMG-AVCELLGN----GF-PGLTV---STQFSGLEDFDL 190 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHHH-HHHHHHHH----HC-TTCEE---ESCCSCSTTCSE
T ss_pred CCcccCeEEEEecHHHHHHHHHHH-HHhCCCeEEEeCCCHHHHH-HHHHHHhc----cC-Cccee---hhhhhhhhcccc
Confidence 367899999999999999999887 56675 8999999976532 12221111 00 00111 111233567899
Q ss_pred EEEcCCCChhhh--hcccHHHHhcCCCCcEEEEc
Q 016162 240 ISLHPVLDKTTY--HLINKERLATMKKEAILVNC 271 (394)
Q Consensus 240 V~l~lPlt~~t~--~li~~~~l~~mk~gailIN~ 271 (394)
|+.++|..-... .-++...++.++++.++.|+
T Consensus 191 iiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 191 VANASPVGMGTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp EEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred cccCCccccCCCCCCCCChHHHhccCCCcEEEEE
Confidence 999998532111 11344445555555544444
No 292
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.03 E-value=0.012 Score=58.06 Aligned_cols=69 Identities=19% Similarity=0.279 Sum_probs=49.1
Q ss_pred CeEEEEecC-hHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEEE
Q 016162 166 QTVGVIGAG-RIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (394)
Q Consensus 166 ktvGIIGlG-~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (394)
.+|||||+| .+|+..++.+.+.-++++. ++|++.... +++.+.| +. ..+.|+++++.+ .|+|+
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g~-----~~~~~~~ell~~~~vD~V~ 69 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVR-ERFGKEY-------GI-----PVFATLAEMMQHVQMDAVY 69 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHH-HHHHHHH-------TC-----CEESSHHHHHHHSCCSEEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHc-------CC-----CeECCHHHHHcCCCCCEEE
Confidence 479999999 9999999887433467765 678876543 2222222 21 235799999975 99999
Q ss_pred EcCCCC
Q 016162 242 LHPVLD 247 (394)
Q Consensus 242 l~lPlt 247 (394)
+++|..
T Consensus 70 i~tp~~ 75 (387)
T 3moi_A 70 IASPHQ 75 (387)
T ss_dssp ECSCGG
T ss_pred EcCCcH
Confidence 999943
No 293
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.02 E-value=0.0083 Score=58.33 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.1
Q ss_pred CeEEEEecChHHHHHHHHHHhc--CCcEEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~--~G~~V~~~d~ 197 (394)
.+|||+|+|.||+.+.|.|... -+++|.+.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 3799999999999999987433 3588876544
No 294
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.02 E-value=0.011 Score=57.61 Aligned_cols=103 Identities=20% Similarity=0.196 Sum_probs=54.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEE-cC-chhhHHHHHHHhhhhhhhhc-CC------------CCccccccCCH
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYY-DL-YQATRLEKFVTAYGQFLKAN-GE------------QPVTWKRASSM 230 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~-d~-~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~l 230 (394)
.+|||+|+|+||+.++|.+...-+++|.+. |+ ....... +...|.+.--+. +. ....+....++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a-~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMV-YMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHH-HHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHH-HHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 489999999999999998754456887655 43 2222211 111121100000 00 00001112356
Q ss_pred HHH-h--cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 231 DEV-L--READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 231 ~el-l--~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
+++ + ..+|+|+.|+|...... ..-..++.|+..|.++-.
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e-----~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTME-----KAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHH-----HHGGGGGGTCSEEEESSC
T ss_pred HHCccccCCCCEEEECCCchhhHH-----HHHHHHhCCCeEEEeccC
Confidence 665 2 57999999998443321 222345668666666554
No 295
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.00 E-value=0.011 Score=59.30 Aligned_cols=70 Identities=11% Similarity=0.108 Sum_probs=49.2
Q ss_pred CeEEEEec----ChHHHHHHHHHHhcC--CcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--c
Q 016162 166 QTVGVIGA----GRIGSAYARMMVEGF--KMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E 236 (394)
Q Consensus 166 ktvGIIGl----G~IG~~vA~~la~~~--G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~ 236 (394)
.+|||||+ |.||+..++.+ +.. ++++ .++|++.... +.+.+.| +... ...+.++++++. +
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l-~~~~~~~~lvav~d~~~~~~-~~~a~~~-------g~~~--~~~~~~~~~ll~~~~ 89 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAI-LQLSSQFQITALYSPKIETS-IATIQRL-------KLSN--ATAFPTLESFASSST 89 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHH-HHTTTTEEEEEEECSSHHHH-HHHHHHT-------TCTT--CEEESSHHHHHHCSS
T ss_pred CEEEEEcccCCCChHHHHHHHHH-HhcCCCeEEEEEEeCCHHHH-HHHHHHc-------CCCc--ceeeCCHHHHhcCCC
Confidence 58999999 99999999987 454 7776 4788887542 2222222 2211 123578999996 6
Q ss_pred cCEEEEcCCC
Q 016162 237 ADVISLHPVL 246 (394)
Q Consensus 237 aDiV~l~lPl 246 (394)
.|+|++|+|.
T Consensus 90 vD~V~i~tp~ 99 (438)
T 3btv_A 90 IDMIVIAIQV 99 (438)
T ss_dssp CSEEEECSCH
T ss_pred CCEEEEeCCc
Confidence 8999999993
No 296
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.98 E-value=0.074 Score=51.06 Aligned_cols=101 Identities=14% Similarity=0.232 Sum_probs=65.3
Q ss_pred ccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.+.|.||+++|= +++..+.+..+ ..||++|.+..|..-...+.. ..+ ..+..+....+++|.++.+|+|
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~-------~~~--~~g~~v~~~~d~~eav~~aDvv 220 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAA-RILDFKLQLSTPPGYALDAKL-------VDA--ESAPFYQVFDDPNEACKGADLV 220 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCGGGCCCGGG-------SCG--GGGGGEEECSSHHHHTTTCSEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHH-HHcCCEEEEECCcccCCCHHH-------HHH--HcCCeEEEEcCHHHHhcCCCEE
Confidence 478999999985 56777777775 578999999887532111110 000 0112233457999999999999
Q ss_pred EEcC----CCChh--------hhhcccHHHHhcCCCCcEEEEcC
Q 016162 241 SLHP----VLDKT--------TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 241 ~l~l----Plt~~--------t~~li~~~~l~~mk~gailIN~a 272 (394)
..-. ....+ ...-++.+.++.+|++++|.-|.
T Consensus 221 yt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 221 TTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp EECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 7643 11000 12447888888889998888774
No 297
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.98 E-value=0.029 Score=56.51 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=68.0
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEc--------Cchhh--HHHHHHHhh-------hhhhhhcCCCCcc
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYD--------LYQAT--RLEKFVTAY-------GQFLKANGEQPVT 223 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d--------~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~ 223 (394)
.++.|+||.|=|+|++|+..|+.| ...|++|++.+ +..-. .+....+.- .+...+.+. .
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~---~ 306 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKA-MEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGL---V 306 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTC---E
T ss_pred CCcCCCEEEEeCCChHHHHHHHHH-HhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCc---E
Confidence 468999999999999999999997 78999998754 32110 111111000 000000010 0
Q ss_pred ccccCCHHHH-hcccCEEEEcCCCChhhhhcccHHHHhcCCCC--cEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 224 WKRASSMDEV-LREADVISLHPVLDKTTYHLINKERLATMKKE--AILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 224 ~~~~~~l~el-l~~aDiV~l~lPlt~~t~~li~~~~l~~mk~g--ailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
..+.+++ --.||+.+=|. +.+.|+.+....++.. .++++.+.+.+- .+| .+.|++..+
T Consensus 307 ---~~~~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t-~eA-~~iL~~rGI 367 (450)
T 4fcc_A 307 ---YLEGQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTT-IEA-TELFQQAGV 367 (450)
T ss_dssp ---EEETCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBC-HHH-HHHHHHTTC
T ss_pred ---EecCcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCC-HHH-HHHHHHCCC
Confidence 0111122 24689888774 3567888877777643 578888887754 333 245655544
No 298
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.98 E-value=0.022 Score=55.47 Aligned_cols=80 Identities=15% Similarity=0.183 Sum_probs=43.8
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhh-hhhhh--cC--CCCccccccCCHHHHhcccCEE
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYG-QFLKA--NG--EQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~-~~~~~--~~--~~~~~~~~~~~l~ell~~aDiV 240 (394)
+|||+|+|.||+.+++.+...-++++. +.|+..... ......++ ..... .. ....+.....++++++.++|+|
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~-~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYE-AFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHH-HHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHH-HHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 799999999999999987433467765 445543221 11111100 00000 00 0000001123566777889999
Q ss_pred EEcCCCC
Q 016162 241 SLHPVLD 247 (394)
Q Consensus 241 ~l~lPlt 247 (394)
+.|+|..
T Consensus 82 ~~aTp~~ 88 (340)
T 1b7g_O 82 VDTTPNG 88 (340)
T ss_dssp EECCSTT
T ss_pred EECCCCc
Confidence 9999954
No 299
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.96 E-value=0.016 Score=54.66 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=34.5
Q ss_pred ccCCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 162 ~l~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
++.|+++.|+| .|.||+.+++.| ...|++|++++|+...
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L-~~~G~~V~i~~R~~~~ 155 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALL-AGEGAEVVLCGRKLDK 155 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHH-HHCcCEEEEEECCHHH
Confidence 47889999999 999999999998 5789999999998654
No 300
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.94 E-value=0.012 Score=57.61 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=63.1
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHHhcccCEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (394)
.|++|.|+|.|.||...++.+ +.+|++|++.+++..+... ..+ ..|.... ....+ +.++....|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~-~~~-------~lGa~~v--~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFA-KAFGSKVTVISTSPSKKEE-ALK-------NFGADSF--LVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGHHH-HHH-------TSCCSEE--EETTCHHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-HHH-------hcCCceE--EeccCHHHHHHhhCCCCEE
Confidence 688999999999999999985 8999999999987654311 111 2232111 11122 33344568999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+-++..... -...+..|+++..+|+++.
T Consensus 256 id~~g~~~~-----~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 256 IDTVSAVHP-----LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EECCSSCCC-----SHHHHHHEEEEEEEEECCC
T ss_pred EECCCcHHH-----HHHHHHHHhcCCEEEEEcc
Confidence 998874321 2456777888999999875
No 301
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.94 E-value=0.13 Score=49.41 Aligned_cols=104 Identities=13% Similarity=0.173 Sum_probs=65.8
Q ss_pred ccC-CCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHH---HHhhhhhhhhcCCCCccccccCCHHHHhcc
Q 016162 162 LLK-GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 162 ~l~-gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (394)
.+. |.||+++|= +++..+.+..+ ..||++|.+..|..-...+.. .+++ ....| ..+....++++.++.
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~---a~~~g---~~~~~~~d~~eav~~ 214 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITA-AILGFEISIAMPKNYKISPEIWEFAMKQ---ALISG---AKISLGYDKFEALKD 214 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHH---HHHHT---CEEEEESCHHHHHTT
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHH---HHHcC---CeEEEEcCHHHHhcC
Confidence 477 999999985 56777777775 578999999887532111111 1111 01112 123345799999999
Q ss_pred cCEEEEcC--CCCh--h--------hhhcccHHHHhcCCCCcEEEEcC
Q 016162 237 ADVISLHP--VLDK--T--------TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 237 aDiV~l~l--Plt~--~--------t~~li~~~~l~~mk~gailIN~a 272 (394)
+|+|..-. .-.. + ...-++.+.++.+|++++|.-|.
T Consensus 215 aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 215 KDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCL 262 (307)
T ss_dssp CSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECS
T ss_pred CCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 99997654 0011 1 12346888888888888888774
No 302
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.94 E-value=0.012 Score=57.07 Aligned_cols=80 Identities=20% Similarity=0.179 Sum_probs=46.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCc--------cccccCCHHHHhcc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPV--------TWKRASSMDEVLRE 236 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ell~~ 236 (394)
.+|||+|+|.||+.+++.+...-++++. +.|++... .....+.++-.. .+.... ......++++++..
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~-~~~~~~~~g~~~--~~~~~~~v~~~~~~~~~v~~d~~~l~~~ 79 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDF-EAYRAKELGIPV--YAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSH-HHHHHHHTTCCE--EESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHH-HHHHHHhcCccc--cccccccceeccCCceEEcCcHHHhccC
Confidence 3799999999999999987432366765 45654322 222211110000 000000 00123578899999
Q ss_pred cCEEEEcCCCCh
Q 016162 237 ADVISLHPVLDK 248 (394)
Q Consensus 237 aDiV~l~lPlt~ 248 (394)
+|+|+.|+|...
T Consensus 80 vDvV~~aTp~~~ 91 (334)
T 2czc_A 80 VDIIVDATPGGI 91 (334)
T ss_dssp CSEEEECCSTTH
T ss_pred CCEEEECCCccc
Confidence 999999999543
No 303
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=95.93 E-value=0.079 Score=51.14 Aligned_cols=107 Identities=17% Similarity=0.126 Sum_probs=64.7
Q ss_pred ccCCCeEEEEecCh-HHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 162 LLKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~-IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.+.|.+|+++|=|+ +..+.+..+ ..||++|.+..|..-...+...+..-+.....| ..+....++++.++.+|+|
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~~~~~~d~~eav~~aDvv 227 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSA-AKFGMHLQAATPKGYEPDASVTKLAEQYAKENG---TKLLLTNDPLEAAHGGNVL 227 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTT-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEE
T ss_pred CcCCcEEEEECCchhhHHHHHHHH-HHcCCeEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhccCCEE
Confidence 48899999999854 666666664 578999999987543211111110000001112 1233457999999999999
Q ss_pred EEcC----CCChhh--------hhcccHHHHhcCCCCcEEEEcC
Q 016162 241 SLHP----VLDKTT--------YHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 241 ~l~l----Plt~~t--------~~li~~~~l~~mk~gailIN~a 272 (394)
..-+ ....+. ..-++.+.++.+|++++|.-+.
T Consensus 228 y~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~l 271 (321)
T 1oth_A 228 ITDTWISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCL 271 (321)
T ss_dssp EECCSSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECS
T ss_pred EEeccccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCC
Confidence 8832 211111 1346778888888888887763
No 304
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.92 E-value=0.014 Score=56.39 Aligned_cols=95 Identities=15% Similarity=0.098 Sum_probs=61.3
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc------c
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (394)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++..+. + +...+ |..........++.+.+. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~-~-~~~~~-------Ga~~~~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVA-KASGAYPVIVSEPSDFRR-E-LAKKV-------GADYVINPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHH-H-HHHHH-------TCSEEECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH-H-HHHHh-------CCCEEECCCCcCHHHHHHHHcCCCC
Confidence 789999999999999999985 89999 999999886542 1 11122 221111111124433332 4
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+.++.. +++ -...+..++++..++.++.
T Consensus 237 ~D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 237 VDVFLEFSGA-PKA----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEEECSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCC-HHH----HHHHHHHHhcCCEEEEEcc
Confidence 7999988863 221 1445667788888888764
No 305
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.91 E-value=0.023 Score=52.83 Aligned_cols=103 Identities=20% Similarity=0.206 Sum_probs=63.8
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchh------------------hHHHHHHHhhhhhhhhcC-CC
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANG-EQ 220 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~-~~ 220 (394)
..|++++|.|+|.|.+|..+++.|+ ..|. ++.++|+..- .+.+...+ .+.+.+ ..
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La-~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~----~l~~~np~~ 98 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLA-GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQ----RLTQLNPDI 98 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHH-HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHH----HHHHHCTTS
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHH-HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHH----HHHHHCCCC
Confidence 4689999999999999999999984 6676 7888876431 01111111 111111 00
Q ss_pred Ccccc----ccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 221 PVTWK----RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 221 ~~~~~----~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
.+... ...+++++++++|+|+.++. +.+++.++++..... +.-+|..+
T Consensus 99 ~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~~ 150 (251)
T 1zud_1 99 QLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITAS 150 (251)
T ss_dssp EEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEEE
T ss_pred EEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEEe
Confidence 00000 01235678899999999987 678888888766553 33355543
No 306
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.90 E-value=0.013 Score=58.09 Aligned_cols=70 Identities=24% Similarity=0.348 Sum_probs=47.6
Q ss_pred CeEEEEecChHHHHHHHHHHhc--------CCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG--------FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR- 235 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~--------~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~- 235 (394)
.+|||||+|.||+.-++.+++. -+++|. ++|+++... +++.+.|+ .. ..+.|++++++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a-~~~a~~~~-------~~----~~y~d~~~ll~~ 94 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMA-ERHAAKLG-------AE----KAYGDWRELVND 94 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHH-HHHHHHHT-------CS----EEESSHHHHHHC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHH-HHHHHHcC-------CC----eEECCHHHHhcC
Confidence 3899999999999888776321 145655 568877543 33334442 11 23579999996
Q ss_pred -ccCEEEEcCCCC
Q 016162 236 -EADVISLHPVLD 247 (394)
Q Consensus 236 -~aDiV~l~lPlt 247 (394)
+.|+|++|+|..
T Consensus 95 ~~vD~V~I~tp~~ 107 (412)
T 4gqa_A 95 PQVDVVDITSPNH 107 (412)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEECCCcH
Confidence 579999999943
No 307
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.88 E-value=0.027 Score=57.33 Aligned_cols=110 Identities=10% Similarity=0.109 Sum_probs=65.1
Q ss_pred CeEEEEec----ChHHHHHHHHHHhc-CCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--cc
Q 016162 166 QTVGVIGA----GRIGSAYARMMVEG-FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EA 237 (394)
Q Consensus 166 ktvGIIGl----G~IG~~vA~~la~~-~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~a 237 (394)
.+|||||+ |.||+..++.+++. -+++|. ++|++.... +.+.+.| +... ...+.+++++++ +.
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a-~~~a~~~-------g~~~--~~~~~d~~ell~~~~v 109 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSS-LQTIEQL-------QLKH--ATGFDSLESFAQYKDI 109 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHH-HHHHHHT-------TCTT--CEEESCHHHHHHCTTC
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHH-HHHHHHc-------CCCc--ceeeCCHHHHhcCCCC
Confidence 58999999 99999999987432 377765 788887542 2222222 2211 123579999996 68
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCC-------cEEEEc-CCCcccCHHHHHHHHHcCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKE-------AILVNC-SRGPVIDEVALVEHLKQNP 290 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~g-------ailIN~-aRG~~vde~aL~~aL~~g~ 290 (394)
|+|++|+|..... +-....++.| .+++.- ---.+-+.++|+++.++..
T Consensus 110 D~V~I~tp~~~H~-----~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g 165 (479)
T 2nvw_A 110 DMIVVSVKVPEHY-----EVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRA 165 (479)
T ss_dssp SEEEECSCHHHHH-----HHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCT
T ss_pred CEEEEcCCcHHHH-----HHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcC
Confidence 9999999933221 1112223334 366653 1123344456666665543
No 308
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=95.86 E-value=0.015 Score=57.63 Aligned_cols=141 Identities=15% Similarity=0.103 Sum_probs=86.1
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
-.++-|+|.|.+|+.+++.+ +.+|++|+++|++.... + .+-+..+|-++...
T Consensus 204 ~~rL~IfGAGhva~ala~~a-~~lg~~V~v~D~R~~~~--------------------------~-~~~fp~a~~~~~~~ 255 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQG-AFLGYRVTVCDARPVFA--------------------------T-TARFPTADEVVVDW 255 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHH-HHTTCEEEEEESCTTTS--------------------------C-TTTCSSSSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEECCchhhc--------------------------c-cccCCCceEEEeCC
Confidence 35899999999999999985 89999999999876420 1 12245666555554
Q ss_pred CCChhhhhcccHHHHh---cCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeec--------cC---CCCCCC---C
Q 016162 245 VLDKTTYHLINKERLA---TMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDV--------FE---DEPYMK---P 307 (394)
Q Consensus 245 Plt~~t~~li~~~~l~---~mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalDV--------~~---~EP~~~---~ 307 (394)
| .+ .+.. +. .+.+++++|=+.++.-.|...|..+|+++...+.++=- ++ .+=+.+ .
T Consensus 256 p--~~---~~~~--~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG~iGSrrk~~~~~~rL~~~G~~~~~l~ 328 (386)
T 2we8_A 256 P--HR---YLAA--QAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAMGSRRTHEDRLARLREAGLTEEELA 328 (386)
T ss_dssp H--HH---HHHH--HHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEEECCCHHHHHHHHHHHHHTTCCHHHHT
T ss_pred h--HH---HHHh--hccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEEEecChhHHHHHHHHHHhCCCChHHhc
Confidence 4 11 1111 11 15678888888888888888888888876344444310 00 000000 1
Q ss_pred ccccCCceEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 016162 308 GLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKGY 347 (394)
Q Consensus 308 ~L~~~~nvilTPHia~~t~~~~~~~~~~~~~ni~~~l~g~ 347 (394)
.|. .| |=. .||+.|++ .++..++.+|.+..+|.
T Consensus 329 Rl~-~P--IGL-dIGa~tPe---EIAvSI~AEiia~~~~~ 361 (386)
T 2we8_A 329 RLS-SP--IGL-DLGGRTPE---ETAVSIAAEIIAKRWGG 361 (386)
T ss_dssp TCB-CS--CSC-CCCCCSHH---HHHHHHHHHHHHHHTC-
T ss_pred cEE-cC--CCC-CCCCCCHH---HHHHHHHHHHHHHHhcC
Confidence 111 12 112 28888884 55666667788877664
No 309
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=95.86 E-value=0.66 Score=45.23 Aligned_cols=103 Identities=12% Similarity=0.130 Sum_probs=62.2
Q ss_pred ccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHH---HhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFV---TAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.+.|.||+++|= +++..+.+..+ ..||++|.+..|..-...+.+. +++ ....| ..+....+++ .++.+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~---a~~~G---~~v~~~~d~~-av~~a 221 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKN---CEVSG---GSFLVTDDAS-SVEGA 221 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHH---HHHHS---CEEEEECCGG-GGTTC
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHH---HHHcC---CeEEEECCHH-HHcCC
Confidence 588999999985 67778888776 6899999998875321111111 111 01112 1223356888 99999
Q ss_pred CEEEEcC----CCC----hh----h--hhcccHHHHhcCCCCcEEEEcC
Q 016162 238 DVISLHP----VLD----KT----T--YHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 238 DiV~l~l----Plt----~~----t--~~li~~~~l~~mk~gailIN~a 272 (394)
|+|..-+ ... .+ . ..-++.+.++.+|++++|.-|.
T Consensus 222 DVVytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 222 DFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp SEEEECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred CEEEecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 9998632 100 11 0 1335667777777777777663
No 310
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.85 E-value=0.0097 Score=57.20 Aligned_cols=102 Identities=22% Similarity=0.219 Sum_probs=58.8
Q ss_pred CeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
++|+|||.|.+|.+++..++. +..-++..+|...... +.....+.+.. ... ....... .+ .+.++.||+|+++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~-~g~a~dl~~~~-~~~-~~~~v~~-~~-~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLA-QAHAEDILHAT-PFA-HPVWVWA-GS-YGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHH-HHHHHHHHTTG-GGS-CCCEEEE-CC-GGGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHH-HHHHHHHHHhH-hhc-CCeEEEE-CC-HHHhCCCCEEEECC
Confidence 489999999999999988743 2335899999986432 22111221111 001 1112222 34 56699999999987
Q ss_pred CCChhhhhc-------ccH-------HHHhcCCCCcEEEEcCC
Q 016162 245 VLDKTTYHL-------INK-------ERLATMKKEAILVNCSR 273 (394)
Q Consensus 245 Plt~~t~~l-------i~~-------~~l~~mk~gailIN~aR 273 (394)
+... ..++ .|. +.+....|.+++++++.
T Consensus 76 g~~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 76 GVAQ-RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp CCCC-CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCC-CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6332 1111 111 12222368899999854
No 311
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.84 E-value=0.019 Score=55.25 Aligned_cols=96 Identities=14% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh----cccCE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----READV 239 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~~aDi 239 (394)
.|++|.|+|.|.||...++.+ +.+|++|++.+++...... . +..|..........++.+.+ ...|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~-------~~lGa~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYA-KAMGLNVVAVDIGDEKLEL--A-------KELGADLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHHH--H-------HHTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--H-------HHCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence 478999999999999999985 8999999999987654211 1 11222111000112333322 46899
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
|+.++.. +.+ -...++.++++..++.++..
T Consensus 234 vid~~g~-~~~----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 234 AVVTAVS-KPA----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp EEESSCC-HHH----HHHHHHHEEEEEEEEECCCC
T ss_pred EEECCCC-HHH----HHHHHHHhhcCCEEEEeccc
Confidence 9988863 222 14567778889999988653
No 312
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.83 E-value=0.044 Score=53.45 Aligned_cols=69 Identities=14% Similarity=0.212 Sum_probs=47.8
Q ss_pred CCeEEEEecChHHH-HHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEE
Q 016162 165 GQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~-~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (394)
-.+|||||+|.+|. ..+..+ ..-++++. ++|+++... +++.+.| +. ...+.++++++.+ .|+|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~-~~~~~~lvav~d~~~~~a-~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~V 92 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCL-LRAGARLAGFHEKDDALA-AEFSAVY-------AD----ARRIATAEEILEDENIGLI 92 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHH-HHTTCEEEEEECSCHHHH-HHHHHHS-------SS----CCEESCHHHHHTCTTCCEE
T ss_pred CcEEEEECcCHHHHHHHHHHh-hcCCcEEEEEEcCCHHHH-HHHHHHc-------CC----CcccCCHHHHhcCCCCCEE
Confidence 35899999999995 466665 45688855 778887543 2333332 11 1235799999976 8999
Q ss_pred EEcCCC
Q 016162 241 SLHPVL 246 (394)
Q Consensus 241 ~l~lPl 246 (394)
++|+|.
T Consensus 93 ~I~tp~ 98 (361)
T 3u3x_A 93 VSAAVS 98 (361)
T ss_dssp EECCCH
T ss_pred EEeCCh
Confidence 999993
No 313
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.82 E-value=0.0077 Score=58.76 Aligned_cols=67 Identities=15% Similarity=0.184 Sum_probs=46.6
Q ss_pred CeEEEEecChHHHH-HHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEEE
Q 016162 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~~-vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (394)
.+|||||+|.||+. .++.++..-++++. ++|++.... . +.| + ....+.++++++.. .|+|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~---~~~-------~----~~~~~~~~~~ll~~~~vD~V~ 70 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELS-K---ERY-------P----QASIVRSFKELTEDPEIDLIV 70 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGG-G---TTC-------T----TSEEESCSHHHHTCTTCCEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH-H---HhC-------C----CCceECCHHHHhcCCCCCEEE
Confidence 48999999999997 67766333377775 678876431 1 111 1 12345789999987 89999
Q ss_pred EcCCCC
Q 016162 242 LHPVLD 247 (394)
Q Consensus 242 l~lPlt 247 (394)
+|+|..
T Consensus 71 i~tp~~ 76 (362)
T 3fhl_A 71 VNTPDN 76 (362)
T ss_dssp ECSCGG
T ss_pred EeCChH
Confidence 999943
No 314
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.81 E-value=0.027 Score=54.07 Aligned_cols=110 Identities=15% Similarity=0.082 Sum_probs=69.7
Q ss_pred cccCCCeEEEE-ec-ChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--
Q 016162 161 NLLKGQTVGVI-GA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (394)
Q Consensus 161 ~~l~gktvGII-Gl-G~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (394)
.-+..+++.|| |+ |+.|+.+++.+ +.+|++++ ..+|..... + . .+...+.+++|+..
T Consensus 9 ~l~~~~siaVV~Gasg~~G~~~~~~l-~~~G~~~v~~VnP~~~g~-~--------------i--~G~~vy~sl~el~~~~ 70 (305)
T 2fp4_A 9 LYVDKNTKVICQGFTGKQGTFHSQQA-LEYGTNLVGGTTPGKGGK-T--------------H--LGLPVFNTVKEAKEQT 70 (305)
T ss_dssp GCCCTTCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-E--------------E--TTEEEESSHHHHHHHH
T ss_pred HHhCCCcEEEEECCCCCHHHHHHHHH-HHCCCcEEEEeCCCcCcc-e--------------E--CCeeeechHHHhhhcC
Confidence 34677889999 99 99999999997 67888843 566643110 0 0 11233568999988
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC-Ccc
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN-PMF 292 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g-~l~ 292 (394)
..|++++++|. +.....+.+-.=... ..+|+.+-|-. -++..|.+.+++. .+.
T Consensus 71 ~vD~avI~vP~-~~~~~~~~e~i~~Gi---~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 71 GATASVIYVPP-PFAAAAINEAIDAEV---PLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp CCCEEEECCCH-HHHHHHHHHHHHTTC---SEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred CCCEEEEecCH-HHHHHHHHHHHHCCC---CEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 89999999993 233334332222222 24567777643 2344788888876 443
No 315
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.80 E-value=0.02 Score=54.47 Aligned_cols=98 Identities=12% Similarity=0.086 Sum_probs=59.1
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.+|+|+| +|+||+.+++.+...-++++. ++|+......-. ..+ +-.|....++....++++++..+|+|+-+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~---d~g---el~G~~~~gv~v~~dl~~ll~~aDVvIDF 95 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDK---DAS---ILIGSDFLGVRITDDPESAFSNTEGILDF 95 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTS---BGG---GGTTCSCCSCBCBSCHHHHTTSCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---chH---HhhccCcCCceeeCCHHHHhcCCCEEEEc
Confidence 4899999 999999999987545688865 557754221000 000 00111122333457999999999999977
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
.+ |+.. .+..-..++.|.-+|-...|
T Consensus 96 T~--p~a~---~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 96 SQ--PQAS---VLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp SC--HHHH---HHHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHH---HHHHHHHHHcCCCEEEECCC
Confidence 75 4321 11222234566677766676
No 316
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.80 E-value=0.02 Score=56.56 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=49.9
Q ss_pred CCeEEEEecCh---HHHHHHHHHHhcCCcEEE--EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc---
Q 016162 165 GQTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--- 236 (394)
Q Consensus 165 gktvGIIGlG~---IG~~vA~~la~~~G~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--- 236 (394)
-.+|||||+|. ||+..+..++..-+++++ ++|+++... +++.+.| |... ...+.|+++++..
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~-------g~~~--~~~~~~~~~ll~~~~~ 81 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRG-SAFGEQL-------GVDS--ERCYADYLSMFEQEAR 81 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHH-HHHHHHT-------TCCG--GGBCSSHHHHHHHHTT
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHH-HHHHHHh-------CCCc--ceeeCCHHHHHhcccc
Confidence 45899999999 999988876333347776 479987643 2222222 2211 1235799999975
Q ss_pred ----cCEEEEcCCCC
Q 016162 237 ----ADVISLHPVLD 247 (394)
Q Consensus 237 ----aDiV~l~lPlt 247 (394)
.|+|++|+|..
T Consensus 82 ~~~~vD~V~i~tp~~ 96 (398)
T 3dty_A 82 RADGIQAVSIATPNG 96 (398)
T ss_dssp CTTCCSEEEEESCGG
T ss_pred cCCCCCEEEECCCcH
Confidence 89999999944
No 317
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.80 E-value=0.0089 Score=58.31 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=62.6
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCch---hhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh----
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ---ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL---- 234 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell---- 234 (394)
++.|++|.|+|.|.||..+++.+ +.+|++|++.+++. .+. ++...+ |.... . .. ++.+.+
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~--~~~~~~-------ga~~v-~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLF-RTYGLEVWMANRREPTEVEQ--TVIEET-------KTNYY-N-SS-NGYDKLKDSV 244 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHH-HHHTCEEEEEESSCCCHHHH--HHHHHH-------TCEEE-E-CT-TCSHHHHHHH
T ss_pred cCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCccchHHH--HHHHHh-------CCcee-c-hH-HHHHHHHHhC
Confidence 56799999999999999999985 78999999999876 432 112222 21111 0 00 111111
Q ss_pred cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 235 ~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
...|+|+.++...... + ...+..|+++..+|+++-
T Consensus 245 ~~~d~vid~~g~~~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATGADVNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCCCCTHH---H-HHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCCChHHH---H-HHHHHHHhcCCEEEEEec
Confidence 3589999998743222 1 455677889999999864
No 318
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.78 E-value=0.013 Score=55.69 Aligned_cols=103 Identities=21% Similarity=0.205 Sum_probs=61.7
Q ss_pred CeEEEEecChHHHHHHHHHHh---cCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCE
Q 016162 166 QTVGVIGAGRIGSAYARMMVE---GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~---~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (394)
.+|||||+|.||+..++.+.. .-++++. ++|++... +..+ .. +.+++++++ +.|+
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a-------------~~~g-----~~-~~~~~ell~~~~vD~ 68 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG-------------SLDE-----VR-QISLEDALRSQEIDV 68 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC-------------EETT-----EE-BCCHHHHHHCSSEEE
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH-------------HHcC-----CC-CCCHHHHhcCCCCCE
Confidence 489999999999999887632 2366765 56664311 0011 11 368999997 6899
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 016162 240 ISLHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~mk~ga-ilIN~-aRG~~vde~aL~~aL~~g~l~ 292 (394)
|++++|..... +-....++.|. +++.- ---.+-+.++|.++.++..+.
T Consensus 69 V~i~tp~~~H~-----~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 69 AYICSESSSHE-----DYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp EEECSCGGGHH-----HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred EEEeCCcHhHH-----HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 99999943221 12223344454 56652 112334557777777655443
No 319
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.77 E-value=0.015 Score=51.23 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=59.2
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHH-HH---h--cc
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD-EV---L--RE 236 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-el---l--~~ 236 (394)
.|+++.|+| .|.||+.+++.+ +..|++|++.+++.... +. . +..|..........+.. ++ . ..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~-~~-~-------~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIA-KMIGARIYTTAGSDAKR-EM-L-------SRLGVEYVGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHH-HHHTCEEEEEESSHHHH-HH-H-------HTTCCSEEEETTCSTHHHHHHHHTTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHH-HHcCCEEEEEeCCHHHH-HH-H-------HHcCCCEEeeCCcHHHHHHHHHHhCCCC
Confidence 578999999 699999999986 78899999999876542 11 1 11121111000111222 22 2 14
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
.|+|+.+.. .++ -...+..|+++..+|+++..
T Consensus 108 ~D~vi~~~g--~~~----~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 108 VDVVLNSLA--GEA----IQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp EEEEEECCC--THH----HHHHHHTEEEEEEEEECSCG
T ss_pred CeEEEECCc--hHH----HHHHHHHhccCCEEEEEcCC
Confidence 788887764 221 25567788888888888653
No 320
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.74 E-value=0.018 Score=58.70 Aligned_cols=99 Identities=18% Similarity=0.323 Sum_probs=69.5
Q ss_pred ccccCCCeEEEEecC----------hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC
Q 016162 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (394)
Q Consensus 160 g~~l~gktvGIIGlG----------~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
|..+.|++|+|+|+- .=...+++.| ...|++|.+|||.... + .. . ....+
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L-~~~g~~V~~~DP~~~~--------~-------~~--~--~~~~~ 407 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLC-LKAGASVMVHDPYVVN--------Y-------PG--V--EISDN 407 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHH-HHHTCEEEEECSSCCC--------B-------TT--B--CEESC
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHH-HHCCCEEEEECCCccc--------c-------cC--c--ceecC
Confidence 346899999999974 3367888987 6899999999998642 0 00 1 12368
Q ss_pred HHHHhcccCEEEEcCCCChhhhhcccHHH-HhcCC-CCcEEEEcCCCcccCHHHH
Q 016162 230 MDEVLREADVISLHPVLDKTTYHLINKER-LATMK-KEAILVNCSRGPVIDEVAL 282 (394)
Q Consensus 230 l~ell~~aDiV~l~lPlt~~t~~li~~~~-l~~mk-~gailIN~aRG~~vde~aL 282 (394)
+++.++.||.|+++++ .++-+. ++-+. .+.|+ ++.+++|. |+ +.|.+.+
T Consensus 408 ~~~~~~~ad~vvi~t~-~~~f~~-~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 408 LEEVVRNADAIVVLAG-HSAYSS-LKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp HHHHHTTCSEEEECSC-CHHHHS-CCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred HHHHHhcCCEEEEecC-CHHHHh-hhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 8999999999999987 344333 45444 45677 47899995 54 4565444
No 321
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.74 E-value=0.013 Score=56.80 Aligned_cols=70 Identities=16% Similarity=0.274 Sum_probs=45.7
Q ss_pred CeEEEEecChHHH-HHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCEEE
Q 016162 166 QTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (394)
Q Consensus 166 ktvGIIGlG~IG~-~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV~ 241 (394)
.+|||||+|.||+ ..++.++..-+++|. ++|++... ++.+.|+ ... ...+.++++++.. .|+|+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~a~~~~-------~~~--~~~~~~~~~ll~~~~~D~V~ 70 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNE---KAAAPFK-------EKG--VNFTADLNELLTDPEIELIT 70 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCH---HHHHHHH-------TTT--CEEESCTHHHHSCTTCCEEE
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHH---HHHHhhC-------CCC--CeEECCHHHHhcCCCCCEEE
Confidence 3799999999999 466665322377875 77877222 2222211 111 2235789999986 89999
Q ss_pred EcCCCC
Q 016162 242 LHPVLD 247 (394)
Q Consensus 242 l~lPlt 247 (394)
+|+|..
T Consensus 71 i~tp~~ 76 (349)
T 3i23_A 71 ICTPAH 76 (349)
T ss_dssp ECSCGG
T ss_pred EeCCcH
Confidence 999943
No 322
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.74 E-value=0.043 Score=54.20 Aligned_cols=101 Identities=16% Similarity=0.181 Sum_probs=61.4
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc------
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------ 235 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------ 235 (394)
-.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..+. ++.+.+ |..........++.+.+.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~--~~~~~l-------Ga~~vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAIL-KHAGASKVILSEPSEVRR--NLAKEL-------GADHVIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHH--HHHHHH-------TCSEEECTTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHH--HHHHHc-------CCCEEEcCCCCCHHHHHHHHhCCC
Confidence 3588999999999999999984 89999 999999877542 122222 322111111123333222
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
..|+|+-++.....+...+..-....++++..++.++-
T Consensus 282 g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 282 GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 48999999874322221111111233489999998864
No 323
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.73 E-value=0.045 Score=54.95 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=48.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccC----CHHHHhc--ccC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS----SMDEVLR--EAD 238 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~ell~--~aD 238 (394)
.+|||||+|.||+..++.+++.-++++ .++|+++... +.+.+.+ ...|... ...+. +++++++ +.|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~----~~~g~~~--~~~~~~~~~~~~~ll~~~~vD 93 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMV-GRAQEIL----KKNGKKP--AKVFGNGNDDYKNMLKDKNID 93 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHH-HHHHHHH----HHTTCCC--CEEECSSTTTHHHHTTCTTCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHHH----HhcCCCC--CceeccCCCCHHHHhcCCCCC
Confidence 489999999999999988743237776 4778887542 2211111 0112111 11245 8999997 589
Q ss_pred EEEEcCCCC
Q 016162 239 VISLHPVLD 247 (394)
Q Consensus 239 iV~l~lPlt 247 (394)
+|++|+|..
T Consensus 94 ~V~i~tp~~ 102 (444)
T 2ixa_A 94 AVFVSSPWE 102 (444)
T ss_dssp EEEECCCGG
T ss_pred EEEEcCCcH
Confidence 999999943
No 324
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.73 E-value=0.072 Score=51.88 Aligned_cols=95 Identities=19% Similarity=0.112 Sum_probs=62.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc--cCCHHHHhc-----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (394)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++..+.. + ++..|........ ..++.+.+.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGC-HSAGAKRIIAVDLNPDKFE--K-------AKVFGATDFVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--H-------HHHTTCCEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHH--H-------HHHhCCceEEeccccchhHHHHHHHHhCC
Confidence 578999999999999999985 89999 8999998765421 1 1222321111111 124544443
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~g-ailIN~aR 273 (394)
..|+|+-++.. +++ -...+..++++ ..++.++-
T Consensus 262 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 262 GVDFSLECVGN-VGV----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCC-HHH----HHHHHHHhhcCCcEEEEEcC
Confidence 48999998863 222 14567788998 88888764
No 325
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.69 E-value=0.051 Score=52.63 Aligned_cols=116 Identities=16% Similarity=0.239 Sum_probs=67.8
Q ss_pred CeEEEEecChHHHHHHHHHHhc--------CCcEEE-EEcCchhhH----HHHHHH-hhhhhhhhcCCCCccccccCCHH
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG--------FKMNLI-YYDLYQATR----LEKFVT-AYGQFLKANGEQPVTWKRASSMD 231 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~--------~G~~V~-~~d~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 231 (394)
.+|||||+|.||+.+++.+... .+.+|. ++|++.... ..+... .+ ..+. +....+++
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~-----~~~~----~~~~~d~~ 73 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKR-----ETGM----LRDDAKAI 73 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHH-----HHSS----CSBCCCHH
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhc-----cCcc----ccCCCCHH
Confidence 3799999999999999987443 577766 456553221 011000 00 0000 00023899
Q ss_pred HHhc--ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCc
Q 016162 232 EVLR--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNPM 291 (394)
Q Consensus 232 ell~--~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~v-de~aL~~aL~~g~l 291 (394)
+++. +.|+|+.|+|....+.. .-+-....++.|.-++...-+.+. +-+.|.++.++...
T Consensus 74 ~ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 74 EVVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp HHHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred HHhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 9985 48999999995533221 112345667888888876444442 45677777776654
No 326
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.68 E-value=0.033 Score=55.99 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=64.2
Q ss_pred ccCCCeEEEEecC----------hHHHHHHHHHHhcC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCH
Q 016162 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (394)
Q Consensus 162 ~l~gktvGIIGlG----------~IG~~vA~~la~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (394)
.+.|++|+|+|+- .-...+++.| ... |++|.+|||..... ....++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L-~~~~g~~V~~~DP~~~~~----------------------~~~~~~ 368 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELL-NQEPDIEVCAYDPHVELD----------------------FVEHDM 368 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHH-HHSTTCEEEEECSSCCCT----------------------TBCSTT
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHH-HhhcCCEEEEECCCcccc----------------------cccCCH
Confidence 4789999999974 3468889998 677 99999999976431 123578
Q ss_pred HHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016162 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (394)
Q Consensus 231 ~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~ 275 (394)
++.++.+|.|+++++ .++-+. ++-+.+..|+ +.+++|. |+-
T Consensus 369 ~~~~~~ad~vvi~t~-~~~f~~-~d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 369 SHAVKDASLVLILSD-HSEFKN-LSDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp HHHHTTCSEEEECSC-CGGGTS-CCGGGGTTCS-SCEEEES-SCC
T ss_pred HHHHhCCCEEEEecC-CHHHhc-cCHHHHHhCC-CCEEEEC-CCC
Confidence 899999999999987 344333 3445556776 6789995 543
No 327
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=95.68 E-value=0.091 Score=52.53 Aligned_cols=112 Identities=22% Similarity=0.210 Sum_probs=71.4
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCcEEE-EEcC----------chhhHHHHHHHhhhhhhhhcCCCCccccccCC
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDL----------YQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
.+++|+++.|.|+|++|+.+|+.| ...|++|+ +.|. +.. .+.+..+.. +... .+ .. +
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L-~~~GakVVavsD~~G~i~dp~Gld~~-~l~~~~~~~-------g~v~-~~-~~-~ 281 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHA-ERLGMRVVAVATSMGGMYAPEGLDVA-EVLSAYEAT-------GSLP-RL-DL-A 281 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHH-HHHHHHHHH-------SSCS-CC-CB-C
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEcCCCeEECCCCCCHH-HHHHHHHhh-------CCcc-ee-ec-c
Confidence 478999999999999999999997 68899998 5555 222 222222211 1100 00 01 1
Q ss_pred HHHHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 230 l~ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
-++++ ..||+++-|.. .+.|+.+.-..++ -.+++..|.+.+- .+|- +.|++..+.
T Consensus 282 ~~e~~~~~~DVliP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~A~-~~L~~~Gi~ 337 (419)
T 3aoe_E 282 PEEVFGLEAEVLVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN-PEAE-AYLLGKGAL 337 (419)
T ss_dssp TTTGGGSSCSEEEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC-HHHH-HHHHHHTCE
T ss_pred chhhhccCceEEEeccc-----ccccccchHhhCC-ceEEEECCCCcCC-HHHH-HHHHHCCCE
Confidence 12333 47999998864 5567777777774 4589999998864 4444 455555443
No 328
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.67 E-value=0.024 Score=54.74 Aligned_cols=69 Identities=16% Similarity=0.265 Sum_probs=49.1
Q ss_pred CeEEEEecC-hHHHHHHHHHHhcC--CcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCE
Q 016162 166 QTVGVIGAG-RIGSAYARMMVEGF--KMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (394)
Q Consensus 166 ktvGIIGlG-~IG~~vA~~la~~~--G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (394)
.+|||||+| .+|+..++.+ +.. ++++ .++|+++... +++.+.| +. ...+.|+++++. +.|+
T Consensus 19 irvgiIG~G~~~g~~~~~~l-~~~~~~~~lvav~d~~~~~~-~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPAL-KNLSHLFEITAVTSRTRSHA-EEFAKMV-------GN----PAVFDSYEELLESGLVDA 85 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHH-HTTTTTEEEEEEECSSHHHH-HHHHHHH-------SS----CEEESCHHHHHHSSCCSE
T ss_pred eeEEEEecCHHHHHHHHHHH-HhCCCceEEEEEEcCCHHHH-HHHHHHh-------CC----CcccCCHHHHhcCCCCCE
Confidence 489999999 8999999887 454 5776 5788887542 3333333 11 123579999996 5899
Q ss_pred EEEcCCCC
Q 016162 240 ISLHPVLD 247 (394)
Q Consensus 240 V~l~lPlt 247 (394)
|++|+|..
T Consensus 86 V~i~tp~~ 93 (340)
T 1zh8_A 86 VDLTLPVE 93 (340)
T ss_dssp EEECCCGG
T ss_pred EEEeCCch
Confidence 99999943
No 329
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.67 E-value=0.069 Score=52.01 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=61.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc--cCCHHHHhc-----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (394)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++..+.. + ++..|........ ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFA--K-------AKEVGATECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--H-------HHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--H-------HHHhCCceEecccccchhHHHHHHHHhCC
Confidence 578999999999999999985 89999 8999998765421 1 1122321111011 123444333
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~g-ailIN~aR 273 (394)
..|+|+-++.. +++ -...++.++++ ..++.++-
T Consensus 261 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 261 GVDFSFEVIGR-LDT----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHHBCTTTCEEEECSC
T ss_pred CCcEEEECCCC-HHH----HHHHHHHhhcCCcEEEEecc
Confidence 47999988863 222 14566778888 88888753
No 330
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.66 E-value=0.016 Score=55.94 Aligned_cols=62 Identities=13% Similarity=0.205 Sum_probs=45.3
Q ss_pred CCCeEEEEecChHHH-HHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc---cC
Q 016162 164 KGQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---AD 238 (394)
Q Consensus 164 ~gktvGIIGlG~IG~-~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aD 238 (394)
+-.+|||||+|.||+ ..++.++..-+++|. ++|++... . +...+.++++++.. .|
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------------------~--g~~~~~~~~~ll~~~~~vD 83 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------------------E--GVNSYTTIEAMLDAEPSID 83 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------------------T--TSEEESSHHHHHHHCTTCC
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------------------c--CCCccCCHHHHHhCCCCCC
Confidence 346899999999998 688877433477765 56776431 0 12235799999876 89
Q ss_pred EEEEcCC
Q 016162 239 VISLHPV 245 (394)
Q Consensus 239 iV~l~lP 245 (394)
+|++++|
T Consensus 84 ~V~i~tp 90 (330)
T 4ew6_A 84 AVSLCMP 90 (330)
T ss_dssp EEEECSC
T ss_pred EEEEeCC
Confidence 9999999
No 331
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.66 E-value=0.02 Score=55.08 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=61.1
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc----ccCE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR----EADV 239 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~----~aDi 239 (394)
.|++|.|+|.|.||...++.+ +.+|++|++.+++.++.. + +++.|..........++.+.+. ..|+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYA-RAMGLRVAAVDIDDAKLN--L-------ARRLGAEVAVNARDTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHH-HHTTCEEEEEESCHHHHH--H-------HHHTTCSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCCHHHHH--H-------HHHcCCCEEEeCCCcCHHHHHHHhCCCCCE
Confidence 578999999999999999985 899999999998775431 1 1222322111111124433332 5788
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
|+.+... +++ -...+..++++..++.++
T Consensus 236 vid~~g~-~~~----~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 236 VLVTAVS-PKA----FSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEESSCC-HHH----HHHHHHHEEEEEEEEECS
T ss_pred EEEeCCC-HHH----HHHHHHHhccCCEEEEeC
Confidence 8888752 222 145567788888888875
No 332
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.64 E-value=0.0069 Score=57.36 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=36.5
Q ss_pred cccccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 159 ~g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
...+++|++|.|||.|.+|...++.| ...|++|+++++...
T Consensus 7 l~~~l~~k~VLVVGgG~va~rka~~L-l~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 7 LAHQLKDKRILLIGGGEVGLTRLYKL-MPTGCKLTLVSPDLH 47 (274)
T ss_dssp EEECCTTCEEEEEEESHHHHHHHHHH-GGGTCEEEEEEEEEC
T ss_pred EEEEcCCCEEEEECCcHHHHHHHHHH-HhCCCEEEEEcCCCC
Confidence 34578999999999999999999998 799999999998764
No 333
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.63 E-value=0.011 Score=57.53 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=24.4
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEEEEcC
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL 197 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~~~d~ 197 (394)
+|||+|+|+||+.+.|.+...-.++|.+.+.
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain~ 33 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVND 33 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEeC
Confidence 7999999999999999873333678776644
No 334
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.63 E-value=0.044 Score=57.11 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=64.2
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchh------------------hHHHHHHHhhhhhhhhcC-CC
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANG-EQ 220 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~-~~ 220 (394)
..|++++|.|||.|.+|..+|+.|+ ..|. ++..+|...- .+.+...+ .+.+.. ..
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~----~L~~iNP~v 397 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAA----SLKRIFPLM 397 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-TTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHH----HHHHHCTTC
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHH----HHHhHCCCc
Confidence 5789999999999999999999984 6676 7888875410 01111111 122111 00
Q ss_pred Ccccc-------------------ccCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 221 PVTWK-------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 221 ~~~~~-------------------~~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
.+... ....++++++++|+|+.|+. +.+++.+++..-... +..+|+.+
T Consensus 398 ~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 398 DATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp EEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred EEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 01000 01235678899999999986 677888887655442 44566654
No 335
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.63 E-value=0.038 Score=52.00 Aligned_cols=40 Identities=25% Similarity=0.243 Sum_probs=34.4
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.++.||++.|.|. |.||+++|+.| ...|++|++.+++...
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~l-a~~G~~V~~~~r~~~~ 83 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAF-AKEGANIAIAYLDEEG 83 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCchH
Confidence 4689999999985 78999999998 5779999999987654
No 336
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.62 E-value=0.018 Score=58.13 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=74.0
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc-cCEE
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE-ADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~-aDiV 240 (394)
++.||+|.|||+|..|.++|+.| ...|++|.++|.......+ .. +.++..|. .+..-...++++.. +|+|
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l-~~~G~~V~~~D~~~~~~~~-~~----~~L~~~gi---~~~~g~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLL-AKLGAIVTVNDGKPFDENP-TA----QSLLEEGI---KVVCGSHPLELLDEDFCYM 76 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHH-HHTTCEEEEEESSCGGGCH-HH----HHHHHTTC---EEEESCCCGGGGGSCEEEE
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEeCCcccCCh-HH----HHHHhCCC---EEEECCChHHhhcCCCCEE
Confidence 57899999999999999999987 7899999999986431100 00 11233332 12211233456676 8999
Q ss_pred EEc--CCC-Chhhh-------hcccH-HHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 016162 241 SLH--PVL-DKTTY-------HLINK-ERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (394)
Q Consensus 241 ~l~--lPl-t~~t~-------~li~~-~~l~~-mk~gailIN~aRG~~vde~aL~~aL~~g~ 290 (394)
++. +|. +|+.. .++.+ +.+.. ++...+-|--+.|+.--..-|...|+...
T Consensus 77 v~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 77 IKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp EECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred EECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 876 332 22211 13443 33333 44444556667899888888888887644
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.61 E-value=0.082 Score=51.50 Aligned_cols=95 Identities=17% Similarity=0.055 Sum_probs=61.9
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc--cCCHHHHhc-----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (394)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..+.. + ++..|........ ..++.+.+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFP--K-------AKALGATDCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--H-------HHHTTCSEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--H-------HHHhCCcEEEccccccchHHHHHHHHhCC
Confidence 578999999999999999984 89999 8999998765421 1 1222321111111 023444332
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~g-ailIN~aR 273 (394)
..|+|+-++.. +++ -...++.++++ ..++.++-
T Consensus 265 g~Dvvid~~G~-~~~----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 265 GVDYSLDCAGT-AQT----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CBSEEEESSCC-HHH----HHHHHHTBCTTTCEEEECCC
T ss_pred CccEEEECCCC-HHH----HHHHHHHhhcCCCEEEEECC
Confidence 47999988862 222 14567788888 88888754
No 338
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.61 E-value=0.02 Score=55.53 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=46.2
Q ss_pred CeEEEEecChHHHHHHHHHHh--c-----CCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--
Q 016162 166 QTVGVIGAGRIGSAYARMMVE--G-----FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~--~-----~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (394)
-+|||||+|.||+.-++.++. . .+++|. ++|+++... +.+.+.|+ .. ..+.|++++++
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a-~~~a~~~g-------~~----~~~~d~~~ll~~~ 74 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAV-RAAAGKLG-------WS----TTETDWRTLLERD 74 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHH-HHHHHHHT-------CS----EEESCHHHHTTCT
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHH-HHHHHHcC-------CC----cccCCHHHHhcCC
Confidence 489999999999987766522 1 133544 678887543 33333332 11 23578999996
Q ss_pred ccCEEEEcCCCC
Q 016162 236 EADVISLHPVLD 247 (394)
Q Consensus 236 ~aDiV~l~lPlt 247 (394)
+.|+|++|+|..
T Consensus 75 ~iDaV~I~tP~~ 86 (390)
T 4h3v_A 75 DVQLVDVCTPGD 86 (390)
T ss_dssp TCSEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 479999999943
No 339
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.61 E-value=0.031 Score=54.77 Aligned_cols=95 Identities=12% Similarity=0.238 Sum_probs=54.8
Q ss_pred CCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCC--CCccccccCCHHHHhcccCEEE
Q 016162 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 165 gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDiV~ 241 (394)
..+|+|+| +|.||+.+.+.|...-.+++.+........ ..+.+.|+.+ .+. .... ..+ ++.+..+|+|+
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~---~~~v~~dl~---~~~-~~~~~~vDvVf 87 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHL---RAQKLPTLV---SVK-DADFSTVDAVF 87 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGG---TTSCCCCCB---CGG-GCCGGGCSEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchh---cCcccccce---ecc-hhHhcCCCEEE
Confidence 46899999 999999999998433345777765433211 1111112110 011 0111 122 45567899999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+|+|.... .+.....+.|+.+|+.+-
T Consensus 88 ~atp~~~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 88 CCLPHGTT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp ECCCTTTH------HHHHHTSCTTCEEEECSS
T ss_pred EcCCchhH------HHHHHHHhCCCEEEECCc
Confidence 99994332 222222277999999875
No 340
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.60 E-value=0.0061 Score=59.96 Aligned_cols=38 Identities=26% Similarity=0.503 Sum_probs=34.3
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
.+.+++|+|+|.|.+|+.+++.+ +.+|++|+++|+++.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa-~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSA-QKMGYKVVVLDPSED 46 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCC
Confidence 46799999999999999999995 899999999998764
No 341
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.60 E-value=0.23 Score=48.04 Aligned_cols=107 Identities=16% Similarity=0.147 Sum_probs=67.7
Q ss_pred cccCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhh--HHHHH---HHhhhhhhhhcCCCCccccccCCHHHH
Q 016162 161 NLLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKF---VTAYGQFLKANGEQPVTWKRASSMDEV 233 (394)
Q Consensus 161 ~~l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~el 233 (394)
..+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-. ..+.. .+.+ ....+ .+..+....+++|.
T Consensus 157 ~~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~---~~~~~-~g~~v~~~~d~~ea 231 (328)
T 3grf_A 157 NGFKGIKFAYCGDSMNNVTYDLMRGC-ALLGMECHVCCPDHKDFKPIKEVIDECEEI---IAKHG-TGGSIKIFHDCKKG 231 (328)
T ss_dssp TTGGGCCEEEESCCSSHHHHHHHHHH-HHHTCEEEEECCSSGGGSCCHHHHHHHHHH---HHHHT-CCCEEEEESSHHHH
T ss_pred cccCCcEEEEeCCCCcchHHHHHHHH-HHcCCEEEEECChHhhhCCCHHHHHHHHHH---Hhhcc-CCCeEEEEcCHHHH
Confidence 36899999999976 7888888876 5789999998875322 11111 1111 01100 11223345799999
Q ss_pred hcccCEEEEc----CCCChh---------hhhcccHHHHhcCCCCcEEEEcC
Q 016162 234 LREADVISLH----PVLDKT---------TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 234 l~~aDiV~l~----lPlt~~---------t~~li~~~~l~~mk~gailIN~a 272 (394)
++.+|+|..- +....+ ...-++.+.++.+|++++|.-+.
T Consensus 232 v~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 232 CEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp HTTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hcCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 9999999763 220111 12347888899999999888874
No 342
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.58 E-value=0.0055 Score=59.71 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=44.1
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEEEE-cCchhhH--HHHHH--Hhhhhhhh---hcCCCCccccccCCHHHHhcccC
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYY-DLYQATR--LEKFV--TAYGQFLK---ANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~~~-d~~~~~~--~~~~~--~~~~~~~~---~~~~~~~~~~~~~~l~ell~~aD 238 (394)
+|||+|+|.||+.+++.+...-++++.+. |+.+... ...+. +.|+.+.. ........+ ..++++++..+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v--~~~~~~~~~~vD 80 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEV--AGTVDDMLDEAD 80 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCC--CEEHHHHHHTCS
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEE--cCCHHHHhcCCC
Confidence 79999999999999998743357887554 5442211 11100 00000000 000000001 125778888999
Q ss_pred EEEEcCCCC
Q 016162 239 VISLHPVLD 247 (394)
Q Consensus 239 iV~l~lPlt 247 (394)
+|+.|+|..
T Consensus 81 vV~~atp~~ 89 (337)
T 1cf2_P 81 IVIDCTPEG 89 (337)
T ss_dssp EEEECCSTT
T ss_pred EEEECCCch
Confidence 999999954
No 343
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.55 E-value=0.0069 Score=55.12 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=45.0
Q ss_pred CeEEEEecChHHHHHHHHH-HhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-ccCEEEE
Q 016162 166 QTVGVIGAGRIGSAYARMM-VEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~l-a~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV~l 242 (394)
++++|+|.|++|+.+++.+ ... |+++. ++|.++..... . ..+..+....+++++++ +.|+|++
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~-----------~--i~gv~V~~~~dl~ell~~~ID~ViI 146 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGR-----------P--VRGGVIEHVDLLPQRVPGRIEIALL 146 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTC-----------E--ETTEEEEEGGGHHHHSTTTCCEEEE
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhh-----------h--hcCCeeecHHhHHHHHHcCCCEEEE
Confidence 5799999999999999852 134 78765 56766543110 0 01122223568999886 5899999
Q ss_pred cCCC
Q 016162 243 HPVL 246 (394)
Q Consensus 243 ~lPl 246 (394)
|+|.
T Consensus 147 A~Ps 150 (211)
T 2dt5_A 147 TVPR 150 (211)
T ss_dssp CSCH
T ss_pred eCCc
Confidence 9993
No 344
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.55 E-value=0.034 Score=54.37 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=62.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-------
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------- 235 (394)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..+.. +.+. .|..........++.+.+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a~~-------lGa~~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLA-RLAGATTVILSTRQATKRR--LAEE-------VGATATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHHH--HHHH-------HTCSEEECTTSSCHHHHHHSTTSSST
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HHHH-------cCCCEEECCCCcCHHHHHHhhhhccC
Confidence 478999999999999999984 89999 8999998765421 2222 2322111111234544444
Q ss_pred -ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 236 -EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 236 -~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
..|+|+-++.. +++ -...+..++++..++.++-
T Consensus 252 gg~Dvvid~~G~-~~~----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 252 GGVDVVIECAGV-AET----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TCEEEEEECSCC-HHH----HHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEECCCC-HHH----HHHHHHHhccCCEEEEEec
Confidence 37999888752 222 1455677888888888864
No 345
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=95.55 E-value=0.19 Score=48.55 Aligned_cols=107 Identities=15% Similarity=0.092 Sum_probs=65.7
Q ss_pred ccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 162 ~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.+.|.||+++|= +++..+.+..+ ..+|++|.+..|..-...+...+...+.....| ..+....+++|.++.+|+|
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav~~aDvv 229 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGC-AKVGMSIAVATPEGFTPDPAVSARASEIAGRTG---AEVQILRDPFEAARGAHIL 229 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHH-HHcCCEEEEECCCcccCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhcCCCEE
Confidence 478999999985 67778887775 578999999877532111111100000001112 1233457999999999999
Q ss_pred EEcCCCCh----h--------hhhcccHHHHhcCCCCcEEEEcC
Q 016162 241 SLHPVLDK----T--------TYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 241 ~l~lPlt~----~--------t~~li~~~~l~~mk~gailIN~a 272 (394)
..-.=... + ...-++.+.++.+|++++|.-|.
T Consensus 230 yt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 230 YTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp EECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred EEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 65431110 0 11347888888889998888774
No 346
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.54 E-value=0.019 Score=54.91 Aligned_cols=67 Identities=10% Similarity=0.052 Sum_probs=46.9
Q ss_pred CeEEEEec-ChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh---------
Q 016162 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (394)
Q Consensus 166 ktvGIIGl-G~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (394)
.++||||+ |.||+..++.+ +..+.++. ++|++.... ...+.| . ....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~~~-------~----~~~~~~~~~~ll~~~~~l~~~ 69 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAI-KEVGGVLVASLDPATNVG--LVDSFF-------P----EAEFFTEPEAFEAYLEDLRDR 69 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGGTC-------T----TCEEESCHHHHHHHHHHHHHT
T ss_pred eEEEEECCChHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHhhC-------C----CCceeCCHHHHHHHhhhhccc
Confidence 58999999 78999999987 56688754 778876542 110100 1 122357888888
Q ss_pred -cccCEEEEcCCC
Q 016162 235 -READVISLHPVL 246 (394)
Q Consensus 235 -~~aDiV~l~lPl 246 (394)
.+.|+|++|+|.
T Consensus 70 ~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 70 GEGVDYLSIASPN 82 (312)
T ss_dssp TCCCSEEEECSCG
T ss_pred CCCCcEEEECCCc
Confidence 679999999994
No 347
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.53 E-value=0.019 Score=55.80 Aligned_cols=96 Identities=18% Similarity=0.130 Sum_probs=62.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccC-CHHHHh-cccCEEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDEVL-READVIS 241 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ell-~~aDiV~ 241 (394)
.|++|.|+|.|.||...++.+ +.+|++|++.+++..+.. +.. ..|.......... ++.+.+ ...|+|+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qla-k~~Ga~Vi~~~~~~~~~~--~~~-------~lGa~~v~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLIS-KAMGAETYVISRSSRKRE--DAM-------KMGADHYIATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSSTTHH--HHH-------HHTCSEEEEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHH--HHH-------HcCCCEEEcCcCchHHHHHhhcCCCEEE
Confidence 478999999999999999985 889999999998765421 111 1232111111112 333333 4789999
Q ss_pred EcCCCC-hhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 242 LHPVLD-KTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPlt-~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
-++..+ +.+ + ...++.++++..++.++.
T Consensus 249 d~~g~~~~~~---~-~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 249 VCASSLTDID---F-NIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ECCSCSTTCC---T-TTGGGGEEEEEEEEECCC
T ss_pred ECCCCCcHHH---H-HHHHHHhcCCCEEEEecC
Confidence 998742 111 1 345677889999998865
No 348
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=95.52 E-value=0.16 Score=49.69 Aligned_cols=107 Identities=17% Similarity=0.173 Sum_probs=69.3
Q ss_pred ccCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCE
Q 016162 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (394)
Q Consensus 162 ~l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (394)
.+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+...+..-......|. .+....+++|.++.+|+
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~-~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~---~v~~~~d~~eav~~aDv 248 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTG-AILGVNIHIVAPKALFPTEETQNIAKGFAEKSGA---KLVITDDLDEGLKGSNV 248 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-HHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTC---CEEEESCHHHHHTTCSE
T ss_pred CcCCeEEEEECCCccchHHHHHHHH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcCC---eEEEEeCHHHHhcCCCE
Confidence 4889999999986 9999999986 5789999999875432111111100000011121 22335799999999999
Q ss_pred EEEcCC-CC----hh------hhhcccHHHHhcCC---CCcEEEEcC
Q 016162 240 ISLHPV-LD----KT------TYHLINKERLATMK---KEAILVNCS 272 (394)
Q Consensus 240 V~l~lP-lt----~~------t~~li~~~~l~~mk---~gailIN~a 272 (394)
|..-.= .- .. ...-++.+.++.+| ++++|.-|.
T Consensus 249 vytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 249 VYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp EEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECS
T ss_pred EEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCC
Confidence 976321 10 11 12456888898888 899988874
No 349
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.52 E-value=0.081 Score=51.48 Aligned_cols=95 Identities=15% Similarity=0.018 Sum_probs=62.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcccccc--CCHHHHhc-----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLR----- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~----- 235 (394)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..+.. + +++.|......... .++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGC-KAAGASRIIGVGTHKDKFP--K-------AIELGATECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGHH--H-------HHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHHH--H-------HHHcCCcEEEecccccchHHHHHHHHhCC
Confidence 578999999999999999984 88999 8999998765421 1 12223221111110 23444332
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~g-ailIN~aR 273 (394)
..|+|+-++.. +++ -...+..++++ ..++.++-
T Consensus 261 g~Dvvid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 261 GVDYAVECAGR-IET----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECCC
T ss_pred CCCEEEECCCC-HHH----HHHHHHHHhcCCCEEEEEcc
Confidence 47999998863 222 14567788998 88888763
No 350
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.50 E-value=0.1 Score=50.29 Aligned_cols=95 Identities=15% Similarity=0.069 Sum_probs=61.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc--cCCHHHH---h----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEV---L---- 234 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~el---l---- 234 (394)
.|++|.|+|.|.+|...++.+ +.+|++|++.+++..+.. +. +..|........ ....+++ .
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~-------~~lGa~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAA-KAYGAFVVCTARSPRRLE--VA-------KNCGADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHH--HH-------HHTTCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEcCCHHHHH--HH-------HHhCCCEEEcCcccccHHHHHHHHhcccc
Confidence 478999999999999999985 899999999998765421 11 122321111001 1112232 2
Q ss_pred -cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 235 -READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 235 -~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
...|+|+-++.. +.+ -...+..++++..++.++.
T Consensus 238 g~g~D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 238 GDLPNVTIDCSGN-EKC----ITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SSCCSEEEECSCC-HHH----HHHHHHHSCTTCEEEECSC
T ss_pred CCCCCEEEECCCC-HHH----HHHHHHHHhcCCEEEEEec
Confidence 258999998863 222 1455777899999998864
No 351
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.47 E-value=0.054 Score=56.58 Aligned_cols=102 Identities=17% Similarity=0.236 Sum_probs=64.8
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchh------------------hHHHHHHHhhhhhhhhcCCCC
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQA------------------TRLEKFVTAYGQFLKANGEQP 221 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~------------------~~~~~~~~~~~~~~~~~~~~~ 221 (394)
..|++++|.|||.|.+|..+|+.|+ ..|. ++..+|...- .+.+... +.+.+..- .
T Consensus 322 ekL~~arVLIVGaGGLGs~vA~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa----~~L~~iNP-~ 395 (615)
T 4gsl_A 322 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA----ASLKRIFP-L 395 (615)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHH----HHHHHHCT-T
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHH----HHHHhhCC-C
Confidence 4689999999999999999999985 5666 7888887541 0111111 11221111 1
Q ss_pred ccccc---------------------cCCHHHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 222 VTWKR---------------------ASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 222 ~~~~~---------------------~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
+.+.. ...++++++++|+|+.|+- +.+++.+++..-.. .+..+|+.+
T Consensus 396 V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD-n~~tR~~ln~~c~~---~~~PlI~aa 463 (615)
T 4gsl_A 396 MDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 463 (615)
T ss_dssp CEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-SGGGTHHHHHHHHH---TTCEEEEEE
T ss_pred cEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC-CHHHHHHHHHHHHH---cCCeEEEEE
Confidence 11111 1135678999999999985 77888888775553 344577754
No 352
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.46 E-value=0.075 Score=51.66 Aligned_cols=95 Identities=17% Similarity=0.117 Sum_probs=62.1
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc--cCCHHHHhc-----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (394)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..+.. +.+.+ |........ ..++.+.+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla-~~~Ga~~Vi~~~~~~~~~~--~~~~l-------Ga~~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGC-KVAGASRIIGVDINKDKFA--RAKEF-------GATECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGHH--HHHHH-------TCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--HHHHc-------CCceEeccccccccHHHHHHHHhCC
Confidence 578999999999999999985 88999 8999998765421 11122 221111011 023444333
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~g-ailIN~aR 273 (394)
..|+|+-++.. +.+ -...+..++++ ..++.++-
T Consensus 260 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 260 GVDYSFECIGN-VKV----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCc-HHH----HHHHHHhhccCCcEEEEEec
Confidence 47999998863 222 14567788998 88888764
No 353
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.42 E-value=0.014 Score=52.22 Aligned_cols=99 Identities=9% Similarity=0.188 Sum_probs=58.3
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchh-hHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhcccCEEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV~ 241 (394)
|++.|.| .|.||+.+++.|++.-|++|++.+|+.. .. +.... ...+.... ......++++++..+|+|+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~-~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~d~vv 78 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI-PPEII------DHERVTVIEGSFQNPGXLEQAVTNAEVVF 78 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHS-CHHHH------TSTTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccc-hhhcc------CCCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence 6799999 6999999999984268999999999875 31 11100 00010000 0111234567788999999
Q ss_pred EcCCCChhhhhcccHHHHhcCCC--CcEEEEcCCCc
Q 016162 242 LHPVLDKTTYHLINKERLATMKK--EAILVNCSRGP 275 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~--gailIN~aRG~ 275 (394)
.+..... .. ....+..|++ ...||++|...
T Consensus 79 ~~ag~~n-~~---~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 79 VGAMESG-SD---MASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp ESCCCCH-HH---HHHHHHHHHHTTCCEEEEEEETT
T ss_pred EcCCCCC-hh---HHHHHHHHHhcCCCeEEEEeece
Confidence 9886431 11 2333444432 23677776544
No 354
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.41 E-value=0.015 Score=55.90 Aligned_cols=102 Identities=18% Similarity=0.267 Sum_probs=57.7
Q ss_pred eEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCC
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP 245 (394)
+|+|||.|.+|..+|..++. .|. +|..+|...... +.....+.+.....+ .........+. +.++.||+|+++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-~~l~el~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-RGYDDLLLIARTPGKP-QGEALDLAHAAAELG-VDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTCSCEEEECSSTTHH-HHHHHHHHHHHHHHT-CCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCChhhH-HHHHHHHHHhhhhcC-CCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 58999999999999987743 355 799999986432 221111111100011 11112222455 57999999999965
Q ss_pred CChhhhh------------ccc--HHHHhcCCCCcEEEEcCC
Q 016162 246 LDKTTYH------------LIN--KERLATMKKEAILVNCSR 273 (394)
Q Consensus 246 lt~~t~~------------li~--~~~l~~mk~gailIN~aR 273 (394)
... ..+ ++. .+.+....|++++|+++.
T Consensus 77 ~~~-k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 77 IGR-KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CCC-CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCC-CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 322 111 110 112222358999999855
No 355
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.38 E-value=0.012 Score=57.51 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=52.3
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhh---cCCCCccccccCCHHHHhc-ccCEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA---NGEQPVTWKRASSMDEVLR-EADVI 240 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ell~-~aDiV 240 (394)
.+|+|+| +|.||+.+++.|...-+++|.+..++.......+.+.|...... .+.....+.. .+++++++ .+|+|
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~DvV 87 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIP-TDPKHEEFEDVDIV 87 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEE-SCTTSGGGTTCCEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEe-CCHHHHhcCCCCEE
Confidence 4899999 99999999999743224687766322111100111111100000 0000011111 24555556 89999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
++|+|... +..+. ... .+.|+.+|+.+-
T Consensus 88 ~~atp~~~-~~~~a-~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 88 FSALPSDL-AKKFE-PEF---AKEGKLIFSNAS 115 (354)
T ss_dssp EECCCHHH-HHHHH-HHH---HHTTCEEEECCS
T ss_pred EECCCchH-HHHHH-HHH---HHCCCEEEECCc
Confidence 99998322 22221 222 246888998864
No 356
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.37 E-value=0.077 Score=47.00 Aligned_cols=96 Identities=14% Similarity=0.097 Sum_probs=56.4
Q ss_pred CeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhcccCEEEE
Q 016162 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVISL 242 (394)
Q Consensus 166 ktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV~l 242 (394)
++|.|+|. |.||+.+++.| ...|.+|++.+|+.....+. ...+.... .... .+. +.+..+|+|+.
T Consensus 1 MkilVtGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~~D~~d-~~~-~~~~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEA-RRRGHEVLAVVRDPQKAADR---------LGATVATLVKEPLV-LTE-ADLDSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCHHHHHHH---------TCTTSEEEECCGGG-CCH-HHHTTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHH-HHCCCEEEEEEecccccccc---------cCCCceEEeccccc-ccH-hhcccCCEEEE
Confidence 36899987 99999999998 56799999999987543210 00111000 0111 122 67889999998
Q ss_pred cCCCC--hh--hhhc-ccHHHHhcCC-CCcEEEEcCC
Q 016162 243 HPVLD--KT--TYHL-INKERLATMK-KEAILVNCSR 273 (394)
Q Consensus 243 ~lPlt--~~--t~~l-i~~~~l~~mk-~gailIN~aR 273 (394)
+.... +. ...+ .....+..|+ .|..+|.+|.
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 87542 11 0111 1133455553 3466777765
No 357
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.37 E-value=0.021 Score=55.13 Aligned_cols=91 Identities=18% Similarity=0.147 Sum_probs=62.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..+.. + ++..|..... .+.+++.+..|+|+-+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~v~----~~~~~~~~~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYA-VAMGAEVSVFARNEHKKQ--D-------ALSMGVKHFY----TDPKQCKEELDFIIST 241 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHTTCEEEEECSSSTTHH--H-------HHHTTCSEEE----SSGGGCCSCEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCeEEEEeCCHHHHH--H-------HHhcCCCeec----CCHHHHhcCCCEEEEC
Confidence 588999999999999999985 899999999998775432 1 1222322111 2223333378999988
Q ss_pred CCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 244 PVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 244 lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+..... -...+..++++..++.++.
T Consensus 242 ~g~~~~-----~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 242 IPTHYD-----LKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp CCSCCC-----HHHHHTTEEEEEEEEECCC
T ss_pred CCcHHH-----HHHHHHHHhcCCEEEEECC
Confidence 873311 2456778899999998864
No 358
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.35 E-value=0.23 Score=49.99 Aligned_cols=168 Identities=16% Similarity=0.177 Sum_probs=109.5
Q ss_pred CCceEecCCCCCchhhHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChHHHHHHHHHHhc
Q 016162 108 YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEG 187 (394)
Q Consensus 108 ~gI~v~n~p~~~~~~vAE~~l~~~L~~~R~~~~~~~~~~~g~~~~w~~~~~~g~~l~gktvGIIGlG~IG~~vA~~la~~ 187 (394)
..|+|.|+-- .-+|=-+++-+++.+|- .|+.|.+.++.|.|.|.-|-.+|+.+ ..
T Consensus 186 ~~ipvFnDD~---qGTA~V~lAgllnAlki---------------------~gk~l~d~riV~~GAGaAGigia~ll-~~ 240 (487)
T 3nv9_A 186 CDIPVWHDDQ---QGTASVTLAGLLNALKL---------------------VKKDIHECRMVFIGAGSSNTTCLRLI-VT 240 (487)
T ss_dssp CSSCEEETTT---HHHHHHHHHHHHHHHHH---------------------HTCCGGGCCEEEECCSHHHHHHHHHH-HH
T ss_pred ccCCcccccc---chHHHHHHHHHHHHHHH---------------------hCCChhhcEEEEECCCHHHHHHHHHH-HH
Confidence 4799999764 45677788888888772 34678999999999999999999998 67
Q ss_pred CCc---EEEEEcCch----h-hHHHH-----HHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcCCCChhhhhcc
Q 016162 188 FKM---NLIYYDLYQ----A-TRLEK-----FVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (394)
Q Consensus 188 ~G~---~V~~~d~~~----~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lPlt~~t~~li 254 (394)
.|. +++.+|+.. . ..... +..+|. +..+. ....+|.|+++.+|+++=+-- . ..+.|
T Consensus 241 ~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A---~~~n~-----~~~~~L~eav~~adVlIG~S~--~-~pg~f 309 (487)
T 3nv9_A 241 AGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEIC---ETTNP-----SKFGSIAEACVGADVLISLST--P-GPGVV 309 (487)
T ss_dssp TTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHH---HHSCT-----TCCCSHHHHHTTCSEEEECCC--S-SCCCC
T ss_pred cCCCcccEEEEeccccccCCcchhhhhcccHHHHHHH---Hhccc-----ccCCCHHHHHhcCCEEEEecc--c-CCCCC
Confidence 898 799999752 1 11111 111121 11110 023589999999998764421 1 14789
Q ss_pred cHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCcceEEeeccCCCCCCCCccccCCceEEcCCCC
Q 016162 255 NKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIA 322 (394)
Q Consensus 255 ~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~l~gaalDV~~~EP~~~~~L~~~~nvilTPHia 322 (394)
.++.++.|.+..++.-.|.... +..++. .+.|+...|. -.-+.| -+-.|+++-|-|+
T Consensus 310 t~e~V~~Ma~~PIIFaLSNPtpEi~pe~A---~~~G~aIvAT----Grsd~P----nQ~NN~liFPGI~ 367 (487)
T 3nv9_A 310 KAEWIKSMGEKPIVFCCANPVPEIYPYEA---KEAGAYIVAT----GRGDFP----NQVNNSVGFPGIL 367 (487)
T ss_dssp CHHHHHTSCSSCEEEECCSSSCSSCHHHH---HHTTCSEEEE----SCTTSS----SBCCGGGTHHHHH
T ss_pred CHHHHHhhcCCCEEEECCCCCccCCHHHH---HHhCCEEEEE----CCCCCc----ccCcceeEcchhh
Confidence 9999999999999999997654 222333 3356522221 111222 2456888888664
No 359
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.34 E-value=0.072 Score=51.99 Aligned_cols=95 Identities=18% Similarity=0.111 Sum_probs=61.9
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc--cCCHHHHhc-----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (394)
.|.+|.|+|.|.||...++.+ +..|+ +|++.|++..+.. + +++.|........ ..++.+.+.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a-~~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGA-KTAGASRIIGIDIDSKKYE--T-------AKKFGVNEFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHHTCSCEEEECSCTTHHH--H-------HHTTTCCEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--H-------HHHcCCcEEEccccCchhHHHHHHHhcCC
Confidence 588999999999999999985 89999 8999998775431 1 1222322211111 134444433
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~g-ailIN~aR 273 (394)
..|+|+-++.. +++ -...+..++++ ..++.++-
T Consensus 263 g~D~vid~~g~-~~~----~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 263 GVDYSFECIGN-VSV----MRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCC-HHH----HHHHHHHhhccCCEEEEEcc
Confidence 38999988862 222 14567778886 88888753
No 360
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.34 E-value=0.047 Score=53.36 Aligned_cols=71 Identities=13% Similarity=0.143 Sum_probs=46.4
Q ss_pred CeEEEEe-cChHHHH-HH----HHHHhcCCcEE----------EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC
Q 016162 166 QTVGVIG-AGRIGSA-YA----RMMVEGFKMNL----------IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (394)
Q Consensus 166 ktvGIIG-lG~IG~~-vA----~~la~~~G~~V----------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
.+||||| +|.||+. .+ +.+...-+..+ .++|++.... +.+.+.| +.. ..+.|
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a-~~~a~~~-------~~~----~~~~~ 74 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKV-EALAKRF-------NIA----RWTTD 74 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHH-HHHHHHT-------TCC----CEESC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHH-HHHHHHh-------CCC----cccCC
Confidence 4799999 9999998 66 55533333332 3888887653 2222222 211 13579
Q ss_pred HHHHhcc--cCEEEEcCCCCh
Q 016162 230 MDEVLRE--ADVISLHPVLDK 248 (394)
Q Consensus 230 l~ell~~--aDiV~l~lPlt~ 248 (394)
+++++.+ .|+|++|+|...
T Consensus 75 ~~~ll~~~~iD~V~i~tp~~~ 95 (383)
T 3oqb_A 75 LDAALADKNDTMFFDAATTQA 95 (383)
T ss_dssp HHHHHHCSSCCEEEECSCSSS
T ss_pred HHHHhcCCCCCEEEECCCchH
Confidence 9999976 899999999543
No 361
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.32 E-value=0.039 Score=54.05 Aligned_cols=30 Identities=27% Similarity=0.418 Sum_probs=24.7
Q ss_pred CeEEEEecChHHHHHHHHHHhcC-CcEEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLIYYD 196 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~-G~~V~~~d 196 (394)
.+|||+|+|.||+.+.|.| ... +++|.+.+
T Consensus 18 ikVgI~G~G~iGr~llR~l-~~~p~veivain 48 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRAC-MERNDITVVAIN 48 (354)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTCSSCEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHH-HcCCCeEEEEec
Confidence 3899999999999999987 444 67877665
No 362
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.32 E-value=0.049 Score=52.76 Aligned_cols=95 Identities=18% Similarity=0.132 Sum_probs=61.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc---cCCH-HHHh----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSM-DEVL---- 234 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l-~ell---- 234 (394)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..+.. + ++..|........ ..++ +++.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVA-KAMGAAQVVVTDLSATRLS--K-------AKEIGADLVLQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHHH--H-------HHHTTCSEEEECSSCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--H-------HHHhCCCEEEcCcccccchHHHHHHHHhC
Confidence 478999999999999999984 89999 9999998765421 1 1222321110000 0111 1221
Q ss_pred cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 235 ~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
...|+|+-++.. +.+ -...+..++++..++.++-
T Consensus 241 ~g~D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 241 CKPEVTIECTGA-EAS----IQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SCCSEEEECSCC-HHH----HHHHHHHSCTTCEEEECSC
T ss_pred CCCCEEEECCCC-hHH----HHHHHHHhcCCCEEEEEec
Confidence 248999999863 222 1456778899999998874
No 363
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.31 E-value=0.023 Score=54.48 Aligned_cols=67 Identities=18% Similarity=0.202 Sum_probs=46.5
Q ss_pred CeEEEEec-ChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh---------
Q 016162 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (394)
Q Consensus 166 ktvGIIGl-G~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (394)
.++||||+ |.||+..++.+ +..+.+++ ++|++.... ...+.| . ....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~~~~~-------~----~~~~~~~~~~ll~~~~~l~~~ 69 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAI-KDTGNCLVSAYDINDSVG--IIDSIS-------P----QSEFFTEFEFFLDHASNLKRD 69 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GGGGTC-------T----TCEEESSHHHHHHHHHHHTTS
T ss_pred eEEEEECCCcHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HHHhhC-------C----CCcEECCHHHHHHhhhhhhhc
Confidence 58999999 78999999987 55688654 678776532 110100 1 122356888887
Q ss_pred --cccCEEEEcCCC
Q 016162 235 --READVISLHPVL 246 (394)
Q Consensus 235 --~~aDiV~l~lPl 246 (394)
.+.|+|++++|.
T Consensus 70 ~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 70 SATALDYVSICSPN 83 (318)
T ss_dssp TTTSCCEEEECSCG
T ss_pred cCCCCcEEEECCCc
Confidence 568999999994
No 364
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=95.30 E-value=0.22 Score=48.31 Aligned_cols=103 Identities=13% Similarity=0.155 Sum_probs=62.4
Q ss_pred ccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHH---HHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF---VTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.+.|.||+++|= +++..+.+..+ ..||++|.+..|..-...+.. .+++ ....| ..+....+++ .++.+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~---a~~~g---~~v~~~~d~~-av~~a 243 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKN---CEVSG---GSFLVTDDAS-SVEGA 243 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHH---HHHHC---CEEEEECCGG-GGTTC
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHH---HHHcC---CEEEEECChh-HHcCC
Confidence 588999999985 67778888775 689999999887532111111 1111 01112 1223356888 99999
Q ss_pred CEEEEcC--CC--Ch----h----h--hhcccHHHHhcCCCCcEEEEcC
Q 016162 238 DVISLHP--VL--DK----T----T--YHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 238 DiV~l~l--Pl--t~----~----t--~~li~~~~l~~mk~gailIN~a 272 (394)
|+|..-+ .. .. + . ..-++.+.++.+|++++|.-|.
T Consensus 244 Dvvytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 244 DFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp SEEEECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred CEEEecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 9998632 10 01 1 0 1345677777777777777663
No 365
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.27 E-value=0.021 Score=55.57 Aligned_cols=31 Identities=29% Similarity=0.527 Sum_probs=24.3
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d 196 (394)
.+|||+|+|+||+.++|.+...-+++|.+..
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 3899999999999999987432367776554
No 366
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.26 E-value=0.02 Score=56.04 Aligned_cols=93 Identities=18% Similarity=0.278 Sum_probs=61.1
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHHhcccCEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (394)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..+.. +... .|.... . ...+ .+++....|+|
T Consensus 194 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~Vi~~~~~~~~~~--~a~~-------lGa~~v-i-~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLA-HAMGAHVVAFTTSEAKRE--AAKA-------LGADEV-V-NSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSGGGHH--HHHH-------HTCSEE-E-ETTCHHHHHTTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--HHHH-------cCCcEE-e-ccccHHHHHHhhcCCCEE
Confidence 478999999999999999984 899999999998765421 1111 222111 0 1112 22233568999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+-++..... -...++.++++..++.++.
T Consensus 262 id~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 262 LNTVAAPHN-----LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EECCSSCCC-----HHHHHTTEEEEEEEEECCC
T ss_pred EECCCCHHH-----HHHHHHHhccCCEEEEecc
Confidence 988863211 1456777888888988864
No 367
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.26 E-value=0.12 Score=52.52 Aligned_cols=110 Identities=14% Similarity=0.096 Sum_probs=69.7
Q ss_pred ccccCCCeEEEEecC----------hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhh---hhhcCCCCccccc
Q 016162 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF---LKANGEQPVTWKR 226 (394)
Q Consensus 160 g~~l~gktvGIIGlG----------~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 226 (394)
+..+.|++|+|+|+- .=...+++.| ...|++|.+|||....... +.|+.. +..... ....
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~---~~~~~~~~~~~~~~~---~~~~ 395 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAEL-LSRGARIAAYDPVAQEEAR---RVIALDLADHPSWLE---RLSF 395 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECTTTHHHHH---HHHHHHTTTCHHHHT---TEEE
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHH-HHCCCEEEEECCCccHHHH---Hhhcccccccccccc---ceee
Confidence 346899999999984 3567888987 7899999999998643211 122100 000000 0122
Q ss_pred cCCHHHHhcccCEEEEcCCCChhhhhcccHHHH-hcCCCCcEEEEcCCCcccCHHH
Q 016162 227 ASSMDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVA 281 (394)
Q Consensus 227 ~~~l~ell~~aDiV~l~lPlt~~t~~li~~~~l-~~mk~gailIN~aRG~~vde~a 281 (394)
..++++.++.||.|++++.- ++-+. ++-+.+ ..|+ +.+++|. |+ +.|.+.
T Consensus 396 ~~~~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~~ 446 (478)
T 2y0c_A 396 VDDEAQAARDADALVIVTEW-KIFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPET 446 (478)
T ss_dssp CSSHHHHTTTCSEEEECSCC-GGGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHHH
T ss_pred cCCHHHHHhCCCEEEEecCC-hHhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHHH
Confidence 45788999999999999873 34333 355544 4565 4789997 43 456543
No 368
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=95.25 E-value=0.057 Score=51.87 Aligned_cols=103 Identities=17% Similarity=0.311 Sum_probs=66.6
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.+.|.+|+++|= |++..+.+..+ ..| |++|.+..|..-.-.+...+ .++..|. .+....+++|.++.+
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~~~----~~~~~g~---~~~~~~d~~eav~~a 222 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQAL-AKFDGNRFYFIAPDALAMPQYILD----MLDEKGI---AWSLHSSIEEVMAEV 222 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHH----HHHHTTC---CEEECSCGGGTTTTC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCcccccCHHHHH----HHHHcCC---eEEEEcCHHHHhcCC
Confidence 478999999998 59999999986 688 99999998754321111111 1222231 233347899999999
Q ss_pred CEEEEcCCCCh----hh------hhcccHHHHhcCCCCcEEEEcC
Q 016162 238 DVISLHPVLDK----TT------YHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 238 DiV~l~lPlt~----~t------~~li~~~~l~~mk~gailIN~a 272 (394)
|+|..-.=... +. ..-++.+.++.+||+++|.-|.
T Consensus 223 Dvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 223 DILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp SEEEECC-----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred CEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 99976532111 11 2345777777777787777763
No 369
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.24 E-value=0.024 Score=55.29 Aligned_cols=31 Identities=26% Similarity=0.216 Sum_probs=24.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~~d 196 (394)
.+|||+|+|+||+.+++.+...-+++|.+..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~ 33 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVT 33 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 3899999999999999987433368876553
No 370
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=95.24 E-value=0.037 Score=53.12 Aligned_cols=102 Identities=17% Similarity=0.267 Sum_probs=66.0
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
.+.|.+|+++|= |++..+.+..+ ..||++|.+..|..-...+...+ .++..|. .+....++++.++.+|
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~----~~~~~g~---~~~~~~d~~eav~~aD 223 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEAL-TFYDVELYLISPELLRMPRHIVE----ELREKGM---KVVETTTLEDVIGKLD 223 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHG-GGSCEEEEEECCGGGCCCHHHHH----HHHHTTC---CEEEESCTHHHHTTCS
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHH-HHCCCEEEEECCccccCCHHHHH----HHHHcCC---eEEEEcCHHHHhcCCC
Confidence 478999999998 48999999986 68999999998854321111111 1222221 2233468999999999
Q ss_pred EEEEcCCCCh-----hh------hhcccHHHHhcCCCCcEEEEc
Q 016162 239 VISLHPVLDK-----TT------YHLINKERLATMKKEAILVNC 271 (394)
Q Consensus 239 iV~l~lPlt~-----~t------~~li~~~~l~~mk~gailIN~ 271 (394)
+|..-.=..+ +. ..-++.+.++.+||+++|.-|
T Consensus 224 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~ 267 (308)
T 1ml4_A 224 VLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHP 267 (308)
T ss_dssp EEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECC
T ss_pred EEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECC
Confidence 9976542111 11 133566677777777777665
No 371
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.22 E-value=0.11 Score=45.00 Aligned_cols=72 Identities=11% Similarity=0.054 Sum_probs=47.2
Q ss_pred CCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhcccCEEE
Q 016162 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (394)
Q Consensus 165 gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV~ 241 (394)
++++.|+|. |.||+.+++.| ...|.+|++.+|+...... ....+.... ......++.++++.+|+|+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l-~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 72 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQA-VQAGYEVTVLVRDSSRLPS---------EGPRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEESCGGGSCS---------SSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHH-HHCCCeEEEEEeChhhccc---------ccCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 478999997 99999999998 5679999999997653110 000010000 0111124567788899998
Q ss_pred EcCCC
Q 016162 242 LHPVL 246 (394)
Q Consensus 242 l~lPl 246 (394)
.+...
T Consensus 73 ~~a~~ 77 (206)
T 1hdo_A 73 VLLGT 77 (206)
T ss_dssp ECCCC
T ss_pred ECccC
Confidence 88764
No 372
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.21 E-value=0.041 Score=53.58 Aligned_cols=95 Identities=9% Similarity=0.035 Sum_probs=60.0
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----cc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (394)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++..+.. +.+. .|..........++.+.+. ..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~~Vi~~~~~~~~~~--~a~~-------lGa~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAA-KVCGASIIIAVDIVESRLE--LAKQ-------LGATHVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHHTCSEEEEEESCHHHHH--HHHH-------HTCSEEEETTTSCHHHHHHHHTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHHH--HHHH-------cCCCEEecCCccCHHHHHHHhcCCCC
Confidence 578999999999999999984 88999 7999998765421 1111 2221111111123333332 37
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|+-++.. +++ -...+..++++..++.++-
T Consensus 260 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 260 NFALESTGS-PEI----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEEECSCC-HHH----HHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCC-HHH----HHHHHHHHhcCCEEEEeCC
Confidence 888888762 222 1456777888888888754
No 373
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.21 E-value=0.042 Score=52.93 Aligned_cols=94 Identities=15% Similarity=0.084 Sum_probs=60.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----cc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (394)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..+... ++.. ..........++.+.+. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~~~---------~~~l-a~~v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVV-RASGAGPILVSDPNPYRLAF---------ARPY-ADRLVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHHGG---------GTTT-CSEEECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHHH---------HHHh-HHhccCcCccCHHHHHHHhcCCCC
Confidence 789999999999999999985 89999 99999987654211 1111 10000011124444333 57
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|+-++.. +++ -...+..++++..++.++.
T Consensus 233 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 233 EVLLEFSGN-EAA----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEEECSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCC-HHH----HHHHHHHHhcCCEEEEEec
Confidence 999888863 222 1455677888888888764
No 374
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.21 E-value=0.028 Score=55.23 Aligned_cols=134 Identities=13% Similarity=0.145 Sum_probs=82.4
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
-.++.|+|.|.+|+.+++.+ +.+|++|+++|+++.... .+-+..+|-++...
T Consensus 199 ~~~L~I~GaGhva~aLa~la-~~lgf~V~v~D~R~~~~~---------------------------~~~fp~a~~v~~~~ 250 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFA-SNVGFYTVVTDWRPNQCE---------------------------KHFFPDADEIIVDF 250 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHH-HHHTEEEEEEESCGGGGC---------------------------GGGCTTCSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCeEEEECCCccccc---------------------------cccCCCceEEecCC
Confidence 34799999999999999985 799999999999864310 01134455554443
Q ss_pred CCChhhhhcccHHHHhc--CCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEee--------ccCCCCCCCCccccCCc
Q 016162 245 VLDKTTYHLINKERLAT--MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD--------VFEDEPYMKPGLSEMKN 314 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~--mk~gailIN~aRG~~vde~aL~~aL~~g~l~gaalD--------V~~~EP~~~~~L~~~~n 314 (394)
| ++.+.. +.+++++|=+.++.-.|...|..+|++ ...+.++= ..+..-. ..+
T Consensus 251 p----------~~~~~~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~iGSr~R~~rl~~~g~~-------~~r 312 (362)
T 3on5_A 251 P----------ADFLRKFLIRPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGILGSKERTRRLLQNRKP-------PDH 312 (362)
T ss_dssp H----------HHHHHHSCCCTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEESSCHHHHHHHHTSCCC-------CTT
T ss_pred H----------HHHHhhcCCCCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEEeCCHHHHHHHHhcCCc-------Hhh
Confidence 3 111222 456677777777777777777777765 34444321 1111100 011
Q ss_pred eEEcC---CCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 016162 315 AIVVP---HIASASKWTREGMATLAALNVLGKIKGYP 348 (394)
Q Consensus 315 vilTP---Hia~~t~~~~~~~~~~~~~ni~~~l~g~~ 348 (394)
+-+| -|++.|+ +.++..++.+|.+..+|.+
T Consensus 313 -i~~PIGL~Iga~tP---~EIAvSI~AEiia~~~~~~ 345 (362)
T 3on5_A 313 -LYSPVGLSIDAQGP---EEIAISIVAQLIQLIRSRK 345 (362)
T ss_dssp -EESSCSCCSCCCSH---HHHHHHHHHHHHHHHHHSC
T ss_pred -eECCCCCCCCCCCH---HHHHHHHHHHHHHHHhCCC
Confidence 3333 2778888 4566667788888888874
No 375
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=95.20 E-value=0.13 Score=51.55 Aligned_cols=120 Identities=18% Similarity=0.270 Sum_probs=70.1
Q ss_pred ccccCCCeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCc---------hhhHHHHHHHhhhh--h--hhhcCCCCcccc
Q 016162 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQ--F--LKANGEQPVTWK 225 (394)
Q Consensus 160 g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~---------~~~~~~~~~~~~~~--~--~~~~~~~~~~~~ 225 (394)
|.++.|+++.|.|+|++|+.+|+.| ...|++|+ +.|.+ ....+.++.+..+. . ....+. . .
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L-~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~-~---~ 279 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWL-EKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDN-A---E 279 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHH-HTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSC-C---C
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccC-c---e
Confidence 3479999999999999999999997 78999998 44441 11111111111000 0 000000 0 0
Q ss_pred ccCCHHHHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 226 RASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 226 ~~~~l~ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
...+.++++ ..||+++-|.- .+.|+++....++ -.+++..+.+.+- .+|- +.|.+..+.
T Consensus 280 ~~~~~~~~~~~~~Dil~P~A~-----~~~I~~~~a~~l~-ak~V~EgAN~p~t-~~a~-~~l~~~Gi~ 339 (421)
T 1v9l_A 280 FVKNPDAIFKLDVDIFVPAAI-----ENVIRGDNAGLVK-ARLVVEGANGPTT-PEAE-RILYERGVV 339 (421)
T ss_dssp CCSSTTGGGGCCCSEEEECSC-----SSCBCTTTTTTCC-CSEEECCSSSCBC-HHHH-HHHHTTTCE
T ss_pred EeCCchhhhcCCccEEEecCc-----CCccchhhHHHcC-ceEEEecCCCcCC-HHHH-HHHHHCCCE
Confidence 110234444 47999988853 4556777666664 4578888888864 4443 556655543
No 376
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=95.15 E-value=0.025 Score=53.45 Aligned_cols=93 Identities=16% Similarity=0.105 Sum_probs=59.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcccccc-CCHHHHhcccCEEE
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLREADVIS 241 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~~aDiV~ 241 (394)
.|++|.|+|. |.||...++.+ +..|++|++.+++..+... ++..|......... .++.+.+...|+|+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~---------~~~~ga~~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVA-RAMGLRVLAAASRPEKLAL---------PLALGAEEAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSGGGSHH---------HHHTTCSEEEEGGGHHHHHHHTTSEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHhcCCCEEEECCcchhHHHHhcCceEEE
Confidence 4789999998 99999999985 7999999999987654211 11122211110011 12333346789888
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
- +.. + + -...++.++++..++.++.
T Consensus 195 d-~g~-~-~----~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 195 E-VRG-K-E----VEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp E-CSC-T-T----HHHHHTTEEEEEEEEEC--
T ss_pred E-CCH-H-H----HHHHHHhhccCCEEEEEeC
Confidence 8 753 2 1 2566778888888888753
No 377
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.07 E-value=0.028 Score=54.54 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=25.3
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEEEEcCc
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~ 198 (394)
+|||+|+|+||+.+.|.+...-.++|.+.+..
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 79999999999999998743446787766543
No 378
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=95.07 E-value=0.11 Score=50.05 Aligned_cols=103 Identities=16% Similarity=0.154 Sum_probs=59.6
Q ss_pred CCeEEEEec-ChHHHHHHHHHHhcCCc-------EEEEEcCc----hhhHHHHHHHhhhhhhhhcC-CCCccccccCCHH
Q 016162 165 GQTVGVIGA-GRIGSAYARMMVEGFKM-------NLIYYDLY----QATRLEKFVTAYGQFLKANG-EQPVTWKRASSMD 231 (394)
Q Consensus 165 gktvGIIGl-G~IG~~vA~~la~~~G~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 231 (394)
.++|.|+|. |.||+.++..| ..-|+ +|..+|+. ... .+..... +.+.. ..........++.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L-~~~~~~~~~~~~ev~l~Di~~~~~~~~-~~g~~~d----l~~~~~~~~~~i~~~~~~~ 78 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRI-ANGDMLGKDQPVILQLLEIPNEKAQKA-LQGVMME----IDDCAFPLLAGMTAHADPM 78 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHH-HTTTTTCTTCCEEEEEECCSCHHHHHH-HHHHHHH----HHTTTCTTEEEEEEESSHH
T ss_pred CCEEEEECCCChHHHHHHHHH-HhCCCcCCCCCCEEEEEcCCCcccccc-chhhHHH----HhhhcccccCcEEEecCcH
Confidence 358999997 99999999887 44554 89999987 321 1111111 11110 0111122236788
Q ss_pred HHhcccCEEEEcCCCCh--h-hh-hc--cc----H---HHHhcC-CCCcEEEEcCC
Q 016162 232 EVLREADVISLHPVLDK--T-TY-HL--IN----K---ERLATM-KKEAILVNCSR 273 (394)
Q Consensus 232 ell~~aDiV~l~lPlt~--~-t~-~l--i~----~---~~l~~m-k~gailIN~aR 273 (394)
+.++.||+|+++..... . ++ .+ .| . +.+... ++.+++|+++.
T Consensus 79 ~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 79 TAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp HHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99999999998754221 1 11 01 11 1 122333 47889999974
No 379
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.04 E-value=0.039 Score=53.66 Aligned_cols=94 Identities=14% Similarity=0.021 Sum_probs=58.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh----c--cc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----R--EA 237 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~--~a 237 (394)
.|++|.|+|.|.||...++.+ +.+|++|++.+++..+.. +.+.+ |..........++.+.+ . ..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~~~l-------Ga~~vi~~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIA-KATGAEVIVTSSSREKLD--RAFAL-------GADHGINRLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHH-HHTTCEEEEEESCHHHHH--HHHHH-------TCSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEecCchhHH--HHHHc-------CCCEEEcCCcccHHHHHHHHhCCCCc
Confidence 588999999999999999985 899999999998765421 11222 22111111112332222 1 57
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|+-++. . ++ -...+..++++..++.++.
T Consensus 259 D~vid~~g-~-~~----~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 259 DHILEIAG-G-AG----LGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEEEEETT-S-SC----HHHHHHHEEEEEEEEEECC
T ss_pred eEEEECCC-h-HH----HHHHHHHhhcCCEEEEEec
Confidence 88887775 1 11 2445666777777777753
No 380
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.03 E-value=0.028 Score=53.86 Aligned_cols=96 Identities=19% Similarity=0.113 Sum_probs=62.1
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----cc
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (394)
.|++|.|+|. |.||..+++.+ +..|++|++.+++..+. +... +..|..........++.+.+. ..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~-~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIA-RLKGCRVVGIAGGAEKC-RFLV-------EELGFDGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HHHH-------HTTCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHH-------HHcCCCEEEECCCHHHHHHHHHhcCCCc
Confidence 5889999999 99999999985 79999999999876542 1110 122221111111123433332 47
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
|+|+.+... . .-...+..++++..++.++..
T Consensus 220 d~vi~~~g~--~----~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 220 DVFFDNVGG--E----ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp EEEEESSCH--H----HHHHHHTTEEEEEEEEECCCG
T ss_pred eEEEECCCc--c----hHHHHHHHHhhCCEEEEEeec
Confidence 888888752 1 125567788899899888653
No 381
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.03 E-value=0.044 Score=52.97 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=59.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc------c
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (394)
.|.+|.|+|.|.||...++.+ +..|+ +|++.|++..+. + +.+ +.|..........++.+.+. .
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~-~-~~~-------~lGa~~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGA-NHLGAGRIFAVGSRKHCC-D-IAL-------EYGATDIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HTTTCSSEEEECCCHHHH-H-HHH-------HHTCCEEECGGGSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEECCCHHHH-H-HHH-------HhCCceEEcCCCcCHHHHHHHHcCCCC
Confidence 478999999999999999984 89999 899999876542 1 112 22322111111223333221 4
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
.|+|+-++... ++ -...+..++++..++.++
T Consensus 236 ~D~v~d~~g~~-~~----~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 236 VDKVVIAGGDV-HT----FAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEEECSSCT-TH----HHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCCh-HH----HHHHHHHHhcCCEEEEec
Confidence 78888877632 21 145566778888888775
No 382
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.02 E-value=0.032 Score=54.05 Aligned_cols=94 Identities=15% Similarity=0.144 Sum_probs=61.6
Q ss_pred CCCeEEEE-ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----cc
Q 016162 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (394)
Q Consensus 164 ~gktvGII-GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (394)
.|++|.|+ |.|.||..+++.+ +..|++|++.+++..+... ... .|..........++.+.+. ..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~~~-------lGa~~~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLA-RAFGAEVYATAGSTGKCEA--CER-------LGAKRGINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH--HHH-------HTCSEEEETTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--HHh-------cCCCEEEeCCchHHHHHHHHHhCCCc
Confidence 58899999 6899999999985 8999999999988754321 111 2221111111223433332 48
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|+-|... + .-...+..++++..++.++.
T Consensus 237 Dvvid~~g~-~-----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 237 DIILDMIGA-A-----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEEESCCG-G-----GHHHHHHTEEEEEEEEECCC
T ss_pred eEEEECCCH-H-----HHHHHHHHhccCCEEEEEEe
Confidence 999888762 1 12456778888888888864
No 383
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.02 E-value=0.047 Score=52.65 Aligned_cols=95 Identities=14% Similarity=0.165 Sum_probs=62.2
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc-cccccCCHHHHhc-----c
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLR-----E 236 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ell~-----~ 236 (394)
.|+++.|+|. |.||..+++.+ +..|++|++.+++.... + ... ..|.... ......++.+.+. .
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~V~~~~~~~~~~-~-~~~-------~~g~~~~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYA-KAMGYRVLGIDGGEGKE-E-LFR-------SIGGEVFIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECSTTHH-H-HHH-------HTTCCEEEETTTCSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCcEEEEcCCHHHH-H-HHH-------HcCCceEEecCccHhHHHHHHHHhCCC
Confidence 4789999999 89999999986 78999999999876542 1 111 1222111 1111234554443 4
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+.+.... .+ -...+..|+++..+|+++.
T Consensus 239 ~D~vi~~~g~~-~~----~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 239 AHGVINVSVSE-AA----IEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEEECSSCH-HH----HHHHTTSEEEEEEEEECCC
T ss_pred CCEEEECCCcH-HH----HHHHHHHHhcCCEEEEEeC
Confidence 79998887621 21 2456677888889998865
No 384
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.02 E-value=0.057 Score=51.61 Aligned_cols=94 Identities=18% Similarity=0.110 Sum_probs=61.0
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcccccc-CCHHHHhc-----c
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLR-----E 236 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~-----~ 236 (394)
.|+++.|+|. |.||..+++.+ +..|++|++.+++.... +. .+. .|......... .++.+.+. .
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~-~~-~~~-------~g~~~~~d~~~~~~~~~~~~~~~~~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIA-KLKGCKVVGAAGSDEKI-AY-LKQ-------IGFDAAFNYKTVNSLEEALKKASPDG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHH-HHTTCEEEEEESSHHHH-HH-HHH-------TTCSEEEETTSCSCHHHHHHHHCTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH-HHh-------cCCcEEEecCCHHHHHHHHHHHhCCC
Confidence 5889999998 99999999986 78999999999876442 11 111 12111100111 34444432 4
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+.+... .+ -...+..++++..++.++-
T Consensus 215 ~d~vi~~~g~--~~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 215 YDCYFDNVGG--EF----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEEEESSCH--HH----HHHHHTTEEEEEEEEECCC
T ss_pred CeEEEECCCh--HH----HHHHHHHHhcCCEEEEEec
Confidence 7888888752 21 2556778888888888864
No 385
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.99 E-value=0.037 Score=53.34 Aligned_cols=93 Identities=24% Similarity=0.232 Sum_probs=59.7
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc------c
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (394)
.|++|.|+|. |.||...++.+ +.+|++|++.+++..+.. ... ..|........ .++.+.+. .
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~-------~~ga~~v~~~~-~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIA-KGMGAKVIAVVNRTAATE--FVK-------SVGADIVLPLE-EGWAKAVREATGGAG 227 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSGGGHH--HHH-------HHTCSEEEESS-TTHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHH--HHH-------hcCCcEEecCc-hhHHHHHHHHhCCCC
Confidence 5889999998 99999999985 899999999998765431 111 12221111111 33333221 4
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+-|+.. + .-...+..++++..++.++.
T Consensus 228 ~Dvvid~~g~-~-----~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 228 VDMVVDPIGG-P-----AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEEEESCC--------CHHHHHHTEEEEEEEEEC--
T ss_pred ceEEEECCch-h-----HHHHHHHhhcCCCEEEEEEc
Confidence 7888888763 1 12556778888888888753
No 386
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.97 E-value=0.072 Score=46.95 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=57.6
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhcccCEEEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVISL 242 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV~l 242 (394)
++|.|+| .|.||+.+++.| ...|.+|++.+|+....... . .+.... ..... +. +.+..+|+|+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~---------~-~~~~~~~~D~~d~-~~-~~~~~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEA-KNRGHEVTAIVRNAGKITQT---------H-KDINILQKDIFDL-TL-SDLSDQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCSHHHHHH---------C-SSSEEEECCGGGC-CH-HHHTTCSEEEE
T ss_pred CeEEEEcCCchhHHHHHHHH-HhCCCEEEEEEcCchhhhhc---------c-CCCeEEeccccCh-hh-hhhcCCCEEEE
Confidence 4789999 599999999998 57799999999987542210 0 011000 01111 12 67889999998
Q ss_pred cCCCChhhhhc---ccHHHHhcCCC--CcEEEEcCCCc
Q 016162 243 HPVLDKTTYHL---INKERLATMKK--EAILVNCSRGP 275 (394)
Q Consensus 243 ~lPlt~~t~~l---i~~~~l~~mk~--gailIN~aRG~ 275 (394)
+.......... .....+..|++ ...+|.+|...
T Consensus 68 ~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 68 AYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp CCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred CCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence 88654332110 11234444443 35677766543
No 387
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.97 E-value=0.058 Score=50.26 Aligned_cols=41 Identities=27% Similarity=0.203 Sum_probs=33.5
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhH
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATR 202 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~ 202 (394)
..+.||++.|.|. |.||+++|+.| ...|++|++.+++....
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~l-a~~G~~V~~~~~~~~~~ 68 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRL-ALEGAAVALTYVNAAER 68 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESSCHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCCHHH
Confidence 3689999999985 68999999998 47899999886655443
No 388
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=94.95 E-value=0.039 Score=53.76 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=53.1
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.+|||+| .|.||+.+.+.|...=++++.+........ ..+.+.|.. + .+..... ..++++ +..+|+|++|+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~-~--~g~~~~~---~~~~~~-~~~vDvV~~a~ 76 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPN-L--RGRTNLK---FVPPEK-LEPADILVLAL 76 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGG-G--TTTCCCB---CBCGGG-CCCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCch-h--cCccccc---ccchhH-hcCCCEEEEcC
Confidence 5899999 899999999997433345776654432211 111111110 0 0101111 223334 57899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 245 VLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 245 Plt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|.... ..+. ... ++.|+.+|+.+-
T Consensus 77 g~~~s-~~~a-~~~---~~aG~~VId~Sa 100 (345)
T 2ozp_A 77 PHGVF-AREF-DRY---SALAPVLVDLSA 100 (345)
T ss_dssp CTTHH-HHTH-HHH---HTTCSEEEECSS
T ss_pred CcHHH-HHHH-HHH---HHCCCEEEEcCc
Confidence 95433 2221 222 366888999875
No 389
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=94.93 E-value=0.059 Score=50.80 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=34.4
Q ss_pred cccCCCeEEEEecC---hHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 161 NLLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 161 ~~l~gktvGIIGlG---~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
..+.||++.|.|.+ .||+.+|+.| ...|++|++.+++..
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~l-a~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAV-CAQGAEVALTYLSET 67 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHH-HHTTCEEEEEESSGG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHH-HHCCCEEEEEeCChH
Confidence 46899999999986 8999999998 578999999998854
No 390
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.92 E-value=0.032 Score=55.44 Aligned_cols=100 Identities=11% Similarity=0.115 Sum_probs=58.0
Q ss_pred CeEEEEecChHHHHHHHHHHhcCC---cEEEEEcCchhhHHHHHHHhhhhhhhhcCCC--CccccccCCHHHHhcc--cC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFK---MNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLRE--AD 238 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ell~~--aD 238 (394)
++|+|+|.|.||+.+++.|+ ..| .+|.++||+..+. ++..+.+.... ..... ........++++++++ +|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~-~~g~~~~~V~v~~r~~~~~-~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMA-MNREVFSHITLASRTLSKC-QEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TCTTTCCEEEEEESCHHHH-HHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCceEEEEEECCHHHH-HHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 58999999999999999984 555 4999999987653 22222221100 00000 0011112357788887 89
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+|+.+.|.... ..++ . ..++.|.-+++++-
T Consensus 79 vVin~ag~~~~-~~v~-~---a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 79 IVLNIALPYQD-LTIM-E---ACLRTGVPYLDTAN 108 (405)
T ss_dssp EEEECSCGGGH-HHHH-H---HHHHHTCCEEESSC
T ss_pred EEEECCCcccC-hHHH-H---HHHHhCCCEEEecC
Confidence 99999883221 1111 1 22345666777644
No 391
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=94.92 E-value=0.56 Score=45.84 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=66.5
Q ss_pred cccCCCeEEEEecC--hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 161 NLLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 161 ~~l~gktvGIIGlG--~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
..+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-.-.+...+..-......| ..+....+++|.++.+|
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~-~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g---~~v~~~~d~~eav~~aD 252 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGA-AKMGMDIRLVGPQAYWPDEELVAACQAIAKQTG---GKITLTENVAEGVQGCD 252 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHH-HHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHHTTCS
T ss_pred CCcCceEEEecCCCCcccchHHHHHH-HhcCceEEEeCCcccCCCHHHHHHHHHHHHHcC---CcceeccCHHHHhccCc
Confidence 46899999999954 7999998886 689999999987532111111110000011111 12334578999999999
Q ss_pred EEEEcCCC----Chhh---------hhcccHHHHhc-CCCCcEEEEcC
Q 016162 239 VISLHPVL----DKTT---------YHLINKERLAT-MKKEAILVNCS 272 (394)
Q Consensus 239 iV~l~lPl----t~~t---------~~li~~~~l~~-mk~gailIN~a 272 (394)
+|..-.=. .++. ..-++.+.++. .||+++|.-|.
T Consensus 253 vvyt~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 253 FLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp EEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEEEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 99743211 1111 12367788875 47888888773
No 392
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.90 E-value=0.12 Score=49.43 Aligned_cols=105 Identities=22% Similarity=0.303 Sum_probs=61.6
Q ss_pred CeEEEEec-ChHHHHHHHHHHhcCC--cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc---cCCHHHHhcccCE
Q 016162 166 QTVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREADV 239 (394)
Q Consensus 166 ktvGIIGl-G~IG~~vA~~la~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~aDi 239 (394)
.+|+|||. |.+|..++..|+ ..| -+|..+|+....... .. +.+. ........ ..++++.++.||+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~-~~~~~~ev~L~Di~~~~~~a---~d----L~~~-~~~~~l~~~~~t~d~~~a~~~aDv 71 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLK-NSPLVSRLTLYDIAHTPGVA---AD----LSHI-ETRATVKGYLGPEQLPDCLKGCDV 71 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHH-TCTTCSEEEEEESSSHHHHH---HH----HTTS-SSSCEEEEEESGGGHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCCcEEEEEeCCccHHHH---HH----Hhcc-CcCceEEEecCCCCHHHHhCCCCE
Confidence 37999998 999999999874 445 689999987622111 11 1111 11111221 1468888999999
Q ss_pred EEEcCCC--Chh-hh-hc--cc----H---HHHhcCCCCcEEEEcCCCcccCHHH
Q 016162 240 ISLHPVL--DKT-TY-HL--IN----K---ERLATMKKEAILVNCSRGPVIDEVA 281 (394)
Q Consensus 240 V~l~lPl--t~~-t~-~l--i~----~---~~l~~mk~gailIN~aRG~~vde~a 281 (394)
|+++... .+. ++ .+ .| . +.+....|++++|+++ .++|.-.
T Consensus 72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s--NPv~~~~ 124 (314)
T 1mld_A 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS--NPVNSTI 124 (314)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CCcchhH
Confidence 9998642 221 10 11 01 1 1222234788999974 4566544
No 393
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.87 E-value=0.024 Score=51.40 Aligned_cols=102 Identities=11% Similarity=0.115 Sum_probs=60.7
Q ss_pred cCCCeEEEEe-cChHHHHHHHHHHhcCC-cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhcccC
Q 016162 163 LKGQTVGVIG-AGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREAD 238 (394)
Q Consensus 163 l~gktvGIIG-lG~IG~~vA~~la~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aD 238 (394)
...+++.|.| .|.||+.+++.| ...| .+|++++|+.....+ +...+.... ......+++++++.+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L-~~~G~~~V~~~~R~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQL-ADKQTIKQTLFARQPAKIHK---------PYPTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHH-TTCTTEEEEEEESSGGGSCS---------SCCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHH-HhCCCceEEEEEcChhhhcc---------cccCCcEEEEecCCCHHHHHHHhcCCC
Confidence 4468999999 799999999998 5778 899999998754211 000000000 0111234667889999
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCC--CcEEEEcCCCcc
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKK--EAILVNCSRGPV 276 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~--gailIN~aRG~~ 276 (394)
+|+.+....... ......+..|++ ...||++|....
T Consensus 91 ~vv~~a~~~~~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 91 IVYANLTGEDLD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCSTTHH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred EEEEcCCCCchh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 999887643221 111233444432 246888877443
No 394
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.84 E-value=0.015 Score=53.00 Aligned_cols=71 Identities=21% Similarity=0.238 Sum_probs=46.7
Q ss_pred CCeEEEEecChHHHHHHHHHH-hcCCcEEE-EEcCchh-hHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCE
Q 016162 165 GQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADV 239 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la-~~~G~~V~-~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDi 239 (394)
.++++|+|.|++|+.+++.+. ...|+++. ++|.++. ..- . ....+..+....++++++++ .|.
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG-----------~-~~i~GvpV~~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVG-----------K-TTEDGIPVYGISTINDHLIDSDIET 151 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTT-----------C-BCTTCCBEEEGGGHHHHC-CCSCCE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccC-----------c-eeECCeEEeCHHHHHHHHHHcCCCE
Confidence 358999999999999998621 35688866 5677664 310 0 00112233345688998874 899
Q ss_pred EEEcCCCC
Q 016162 240 ISLHPVLD 247 (394)
Q Consensus 240 V~l~lPlt 247 (394)
+++|+|..
T Consensus 152 vIIAvPs~ 159 (212)
T 3keo_A 152 AILTVPST 159 (212)
T ss_dssp EEECSCGG
T ss_pred EEEecCch
Confidence 99999943
No 395
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.80 E-value=0.038 Score=53.84 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=24.9
Q ss_pred CeEEEEecChHHHHHHHHHHh---cCCcEEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVE---GFKMNLIYYDL 197 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~---~~G~~V~~~d~ 197 (394)
.+|||+|+|+||+.+.|.|.. .-+++|.+.+.
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~ 37 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE 37 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEEC
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeC
Confidence 379999999999999998743 23678876654
No 396
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.79 E-value=0.1 Score=51.05 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=58.2
Q ss_pred CCeEEEEe-cChHHHHHHHHHHhcCC------cEEEEEcC-chh-hHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc
Q 016162 165 GQTVGVIG-AGRIGSAYARMMVEGFK------MNLIYYDL-YQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (394)
Q Consensus 165 gktvGIIG-lG~IG~~vA~~la~~~G------~~V~~~d~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (394)
..+|+|+| .|.+|+.+.++| ...+ .++..+.+ +.. +.... .+.. +. +.....+.. .+.++ +.
T Consensus 9 m~kVaIvGATG~vG~~llr~L-~~~~~~~~~~~ei~~l~s~~~agk~~~~---~~~~-l~--~~~~~~~~~-~~~~~-~~ 79 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLL-LGHPAYADGRLRIGALTAATSAGSTLGE---HHPH-LT--PLAHRVVEP-TEAAV-LG 79 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHH-HTCHHHHTTSEEEEEEEESSCTTSBGGG---TCTT-CG--GGTTCBCEE-CCHHH-HT
T ss_pred CCEEEEECCCCHHHHHHHHHH-HcCCCCCCccEEEEEEECCCcCCCchhh---hccc-cc--ccceeeecc-CCHHH-hc
Confidence 36899999 999999999997 4544 56666642 211 11110 0000 00 001111112 24334 56
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHH
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALV 283 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~ 283 (394)
.+|+|++|+|.+. ..+....++.|+.+|+.|.---.+..+.+
T Consensus 80 ~~DvVf~alg~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~~ 121 (352)
T 2nqt_A 80 GHDAVFLALPHGH------SAVLAQQLSPETLIIDCGADFRLTDAAVW 121 (352)
T ss_dssp TCSEEEECCTTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHHH
T ss_pred CCCEEEECCCCcc------hHHHHHHHhCCCEEEEECCCccCCcchhh
Confidence 8999999999543 23333334678999999754433333433
No 397
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.78 E-value=0.034 Score=54.09 Aligned_cols=29 Identities=28% Similarity=0.577 Sum_probs=23.1
Q ss_pred eEEEEecChHHHHHHHHHHhcC---CcEEEEEc
Q 016162 167 TVGVIGAGRIGSAYARMMVEGF---KMNLIYYD 196 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~---G~~V~~~d 196 (394)
+|||+|+|+||+.+.|.| ... .++|.+.+
T Consensus 3 kVgInG~G~IGr~llR~l-~~~~~p~~eivaIn 34 (337)
T 1rm4_O 3 KVAINGFGRIGRNFLRCW-HGRKDSPLDVVVIN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHH-HTCSSCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHH-HhCCCCCeEEEEEE
Confidence 799999999999999987 443 56776544
No 398
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.78 E-value=0.15 Score=51.56 Aligned_cols=111 Identities=14% Similarity=0.136 Sum_probs=68.0
Q ss_pred ccCCCeEEEEecC----------hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCC-CCccccccCCH
Q 016162 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSM 230 (394)
Q Consensus 162 ~l~gktvGIIGlG----------~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 230 (394)
.+.|++|+|+|+. .-...+++.| ...|++|.+|||...... ....|......... .........++
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYL-MDEGAHLHIYDPKVPREQ--IVVDLSHPGVSEDDQVSRLVTISKDP 402 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHH--HHHHHCC------CHHHHHEEECSSH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHH-HHCCCEEEEEcCccCHHH--HhhhhccccccccccccCceeecCCH
Confidence 4889999999986 3678899998 789999999999854321 11111000000000 00011223578
Q ss_pred HHHhcccCEEEEcCCCChhhhhcccHHHH-hcCCCCcEEEEcCCCcccCH
Q 016162 231 DEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDE 279 (394)
Q Consensus 231 ~ell~~aDiV~l~lPlt~~t~~li~~~~l-~~mk~gailIN~aRG~~vde 279 (394)
++.++.+|.|++++.- ++-+. ++-+.+ ..|+...+++|. |+ +.|.
T Consensus 403 ~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~ 448 (467)
T 2q3e_A 403 YEACDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RR-VLDG 448 (467)
T ss_dssp HHHHTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SC-TTTT
T ss_pred HHHHhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CC-cCCc
Confidence 8899999999999873 44333 354444 567776668886 54 3443
No 399
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.77 E-value=0.086 Score=48.46 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=32.7
Q ss_pred ccCCCeEEEEec-Ch--HHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 162 LLKGQTVGVIGA-GR--IGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 162 ~l~gktvGIIGl-G~--IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
++.||++.|.|. |. ||+++|+.| ...|++|++.+++..
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l-~~~G~~V~~~~r~~~ 44 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSL-HEAGARLIFTYAGER 44 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHH-HHTTCEEEEEESSGG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHH-HHCCCEEEEecCchH
Confidence 688999999997 45 999999998 477999999988753
No 400
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.76 E-value=0.029 Score=46.42 Aligned_cols=99 Identities=16% Similarity=0.112 Sum_probs=64.5
Q ss_pred CeEEEEec----ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 166 QTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 166 ktvGIIGl----G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
++|.|||. |+.|..+.+.| +..|.+|+.++|..... . +...+.++.++-. -|+++
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L-~~~g~~V~pVnP~~~~i-----------------~--G~~~y~sl~dlp~-vDlav 63 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERL-KSHGHEFIPVGRKKGEV-----------------L--GKTIINERPVIEG-VDTVT 63 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHH-HHHTCCEEEESSSCSEE-----------------T--TEECBCSCCCCTT-CCEEE
T ss_pred CEEEEEccCCCCCCHHHHHHHHH-HHCCCeEEEECCCCCcC-----------------C--CeeccCChHHCCC-CCEEE
Confidence 68999998 57999999998 67788999999865321 1 1223457777666 89999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ 292 (394)
+++|. +.+..++.+ ..+ +...+++++. |- . ++++.+.+++..+.
T Consensus 64 i~~p~-~~v~~~v~e-~~~-~g~k~v~~~~--G~-~-~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 64 LYINP-QNQLSEYNY-ILS-LKPKRVIFNP--GT-E-NEELEEILSENGIE 107 (122)
T ss_dssp ECSCH-HHHGGGHHH-HHH-HCCSEEEECT--TC-C-CHHHHHHHHHTTCE
T ss_pred EEeCH-HHHHHHHHH-HHh-cCCCEEEECC--CC-C-hHHHHHHHHHcCCe
Confidence 99992 344455533 222 2334566654 32 3 45666666665554
No 401
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.76 E-value=0.05 Score=52.35 Aligned_cols=115 Identities=15% Similarity=0.055 Sum_probs=71.4
Q ss_pred CCeEEEEecChHHHH-HHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh-cccCEEEE
Q 016162 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISL 242 (394)
Q Consensus 165 gktvGIIGlG~IG~~-vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV~l 242 (394)
.++|.|||.|.+|.+ +|+.| ...|++|.++|........+ .++..|. .+..-.+.+++. .++|+|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L-~~~G~~V~~~D~~~~~~~~~-------~L~~~gi---~v~~g~~~~~l~~~~~d~vV~ 72 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIA-KEAGFEVSGCDAKMYPPMST-------QLEALGI---DVYEGFDAAQLDEFKADVYVI 72 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHH-HHTTCEEEEEESSCCTTHHH-------HHHHTTC---EEEESCCGGGGGSCCCSEEEE
T ss_pred CcEEEEEEECHHHHHHHHHHH-HhCCCEEEEEcCCCCcHHHH-------HHHhCCC---EEECCCCHHHcCCCCCCEEEE
Confidence 478999999999996 88886 78999999999875321111 1222232 121112444555 57999988
Q ss_pred c--CC-CChhhh-------hcccH-HHHhc--CCC-CcEEEEcCCCcccCHHHHHHHHHcCC
Q 016162 243 H--PV-LDKTTY-------HLINK-ERLAT--MKK-EAILVNCSRGPVIDEVALVEHLKQNP 290 (394)
Q Consensus 243 ~--lP-lt~~t~-------~li~~-~~l~~--mk~-gailIN~aRG~~vde~aL~~aL~~g~ 290 (394)
. +| .+|+.. .++.+ +.|.. ++. ..+-|--+.|+.--..-|...|+...
T Consensus 73 Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 73 GNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp CTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 6 33 233322 13443 33443 332 34557777899988888888887643
No 402
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=94.75 E-value=0.037 Score=51.46 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=33.2
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
.+.||++.|.|. |.||+.+|+.| ...|++|++.+|+..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l-~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSC-FNQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHH-HTTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHH-HHCCCEEEEEeCCHH
Confidence 478999999997 69999999998 577999999998764
No 403
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=94.72 E-value=0.97 Score=42.85 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=50.4
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccC
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (394)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-. ... ....| .....+++|.++++|
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~-~~~g~~v~~~~P~~~~-p~~--------~~~~g-----~~~~~d~~eav~~aD 207 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLL-NMFGAKIGVCGPKTLI-PRD--------VEVFK-----VDVFDDVDKGIDWAD 207 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGS-CTT--------GGGGC-----EEEESSHHHHHHHCS
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HHCCCEEEEECCchhC-Cch--------HHHCC-----CEEEcCHHHHhCCCC
Confidence 488999999996 89999999986 6899999999875421 010 01111 233579999999999
Q ss_pred EEEEcCC
Q 016162 239 VISLHPV 245 (394)
Q Consensus 239 iV~l~lP 245 (394)
+|.. +-
T Consensus 208 vvy~-~~ 213 (291)
T 3d6n_B 208 VVIW-LR 213 (291)
T ss_dssp EEEE-CC
T ss_pred EEEE-eC
Confidence 9988 44
No 404
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.72 E-value=0.024 Score=54.62 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=45.0
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhh---HHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcc--cCE
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQAT---RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADV 239 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDi 239 (394)
.++||||+|.+|+..++.+ .-+.++. ++|+++.. ...+..+.| + .....+.|+++++.+ .|+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~~~~~-------~---~~~~~~~~~~~ll~~~~vD~ 70 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKAISEM-------N---IKPKKYNNWWEMLEKEKPDI 70 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHHHHTT-------T---CCCEECSSHHHHHHHHCCSE
T ss_pred eEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHHHHHc-------C---CCCcccCCHHHHhcCCCCCE
Confidence 4899999999999766653 4577776 57876531 222211111 1 112346799999975 899
Q ss_pred EEEcCC
Q 016162 240 ISLHPV 245 (394)
Q Consensus 240 V~l~lP 245 (394)
|++|+|
T Consensus 71 V~I~tp 76 (337)
T 3ip3_A 71 LVINTV 76 (337)
T ss_dssp EEECSS
T ss_pred EEEeCC
Confidence 999998
No 405
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=94.71 E-value=0.11 Score=48.91 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=33.3
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
..+.||++.|.|. |.||+.+|+.| ...|++|++.++...
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~l-a~~G~~V~~~~~~~~ 84 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAY-AREGADVAINYLPAE 84 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEECCGGG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCcc
Confidence 4689999999975 78999999998 578999999988743
No 406
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=94.71 E-value=0.035 Score=54.06 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=28.7
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEEE-EcCchh
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQA 200 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~~-~d~~~~ 200 (394)
.+|||.|||+||+.++|++ ..+|++|++ +||...
T Consensus 8 ~kvgInGFGRIGrlv~R~~-~~~~veivainDp~~d 42 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRAC-MEKGVKVVAVNDPFID 42 (346)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEECTTCC
T ss_pred eEEEEECCChHHHHHHHHH-HhCCCEEEEEeCCCCC
Confidence 4899999999999999985 788999887 677543
No 407
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.69 E-value=0.04 Score=49.13 Aligned_cols=71 Identities=14% Similarity=0.020 Sum_probs=47.2
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCC--CCccccccCCHHHHhcccCEEEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDiV~l 242 (394)
++|.|+| .|.||+.+++.| ...|.+|++.+|+...... +. .+. .........++.++++.+|+|+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~---------~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 73 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEA-LNRGFEVTAVVRHPEKIKI---------EN-EHLKVKKADVSSLDEVCEVCKGADAVIS 73 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHH-HTTTCEEEEECSCGGGCCC---------CC-TTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHH-HHCCCEEEEEEcCcccchh---------cc-CceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 6899999 699999999998 5789999999998654210 00 000 00001112346678899999998
Q ss_pred cCCCC
Q 016162 243 HPVLD 247 (394)
Q Consensus 243 ~lPlt 247 (394)
+....
T Consensus 74 ~a~~~ 78 (227)
T 3dhn_A 74 AFNPG 78 (227)
T ss_dssp CCCC-
T ss_pred eCcCC
Confidence 87543
No 408
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=94.69 E-value=0.036 Score=52.90 Aligned_cols=93 Identities=13% Similarity=0.119 Sum_probs=64.0
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC-HHHHhcccCEEE
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS-MDEVLREADVIS 241 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ell~~aDiV~ 241 (394)
.|.+|.|+| .|.+|...++.+ +.+|++|++.++... . ++.+. .|..........+ +.+.+...|+|+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a-~~~Ga~vi~~~~~~~--~-~~~~~-------lGa~~~i~~~~~~~~~~~~~g~D~v~ 220 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLA-KQKGTTVITTASKRN--H-AFLKA-------LGAEQCINYHEEDFLLAISTPVDAVI 220 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEECHHH--H-HHHHH-------HTCSEEEETTTSCHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHcCCEEEEEeccch--H-HHHHH-------cCCCEEEeCCCcchhhhhccCCCEEE
Confidence 578999997 999999999985 899999998875332 1 22222 2332211112234 667678899999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
-|+.. + .+ ...++.++++..++.++.
T Consensus 221 d~~g~-~----~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 221 DLVGG-D----VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp ESSCH-H----HH-HHHGGGEEEEEEEEECCS
T ss_pred ECCCc-H----HH-HHHHHhccCCCEEEEeCC
Confidence 98862 1 12 567888999999999854
No 409
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=94.68 E-value=0.12 Score=49.70 Aligned_cols=109 Identities=22% Similarity=0.241 Sum_probs=64.2
Q ss_pred CeEEEEe-cChHHHHHHHHHHhc--CCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcccccc--CCHHHHhcccCEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEG--FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLREADVI 240 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~--~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~~aDiV 240 (394)
.+|+|+| .|.+|+.+|..|+.. +.-++..+|... .......+ +.+. ........+ .+..+.++.||+|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~D-----l~~~-~~~~~v~~~~~~~~~~~~~~aDiv 73 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVD-----LSHI-PTAVKIKGFSGEDATPALEGADVV 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHH-----HHTS-CSSEEEEEECSSCCHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHH-----hhCC-CCCceEEEecCCCcHHHhCCCCEE
Confidence 4799999 999999999887543 667999999875 21111111 1111 111112111 2456789999999
Q ss_pred EEcCCC--Chh-hh-hcc--cH-------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 016162 241 SLHPVL--DKT-TY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALV 283 (394)
Q Consensus 241 ~l~lPl--t~~-t~-~li--~~-------~~l~~mk~gailIN~aRG~~vde~aL~ 283 (394)
+++.+. .|. ++ .++ |. +.+....|++++++++ .++|.-..+
T Consensus 74 ii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 74 LISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp EECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 998743 221 11 122 11 1233335888999996 466655544
No 410
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.66 E-value=0.062 Score=51.62 Aligned_cols=69 Identities=13% Similarity=0.208 Sum_probs=44.5
Q ss_pred CeEEEEecChHHHHHHHHHHh-cCCcEE-EEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----ccC
Q 016162 166 QTVGVIGAGRIGSAYARMMVE-GFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~-~~G~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~aD 238 (394)
.+|||||+|.||+.+++.+.+ .-++++ .++|+++.....+..+.| +.. ....+.++++. ..|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~-------g~~----~~~~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM-------GVT----TTYAGVEGLIKLPEFADID 73 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT-------TCC----EESSHHHHHHHSGGGGGEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHc-------CCC----cccCCHHHHHhccCCCCCc
Confidence 489999999999999998744 346664 467877544112221222 211 01246777764 589
Q ss_pred EEEEcCC
Q 016162 239 VISLHPV 245 (394)
Q Consensus 239 iV~l~lP 245 (394)
+|++++|
T Consensus 74 vV~~atp 80 (312)
T 1nvm_B 74 FVFDATS 80 (312)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999999
No 411
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.64 E-value=0.075 Score=51.51 Aligned_cols=105 Identities=12% Similarity=0.184 Sum_probs=61.5
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcC-CC-CccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANG-EQ-PVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~ell~~a 237 (394)
....++|+|||.|.||..+|..++ ..|. ++..+|...........+ +.+.. .. ........+.+ .++.|
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~L~Di~~~~~~g~a~D-----L~~~~~~~~~~~i~~~~d~~-~~~~a 88 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISIL-MKDLADELALVDVIEDKLKGEMMD-----LQHGSLFLKTPKIVSSKDYS-VTANS 88 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSCHHHHHHHHHH-----HHHTGGGCSCCEEEECSSGG-GGTTE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEeCChHHHHHHHHh-----hhhhhhccCCCeEEEcCCHH-HhCCC
Confidence 456789999999999999998774 3355 899999976432221111 11110 00 11111234555 58999
Q ss_pred CEEEEcCC--CCh-hhh-hccc--H-------HHHhcCCCCcEEEEcCC
Q 016162 238 DVISLHPV--LDK-TTY-HLIN--K-------ERLATMKKEAILVNCSR 273 (394)
Q Consensus 238 DiV~l~lP--lt~-~t~-~li~--~-------~~l~~mk~gailIN~aR 273 (394)
|+|+++.. ..| .|+ .++. . +.+....|++++++++.
T Consensus 89 DiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 89 KLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp EEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99998853 222 122 1221 1 23333478999999985
No 412
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.61 E-value=0.11 Score=52.00 Aligned_cols=96 Identities=21% Similarity=0.137 Sum_probs=60.6
Q ss_pred CCCeEEEEecC----------hHHHHHHHHHHhcCCcEEEEEcCchhhHHH-HHHHhhhhh-hhhcCCCCccccccCCHH
Q 016162 164 KGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLE-KFVTAYGQF-LKANGEQPVTWKRASSMD 231 (394)
Q Consensus 164 ~gktvGIIGlG----------~IG~~vA~~la~~~G~~V~~~d~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 231 (394)
.|++|+|+|+. .-...+++.| ...|++|.+|||....... ...+.|+.. +.+.+. ....+++
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 385 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEML-IGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSS-----LLVSDLD 385 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHT-----TBCSCHH
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChhhccchhhhhcccccccccc-----cccCCHH
Confidence 68999999997 5678899998 7899999999998432110 000112100 000000 1235788
Q ss_pred HHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016162 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (394)
Q Consensus 232 ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~ 271 (394)
+.++.||+|++++.- ++-+.+ + .+.|+ +.+++|+
T Consensus 386 ~~~~~~d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 386 EVVASSDVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp HHHHHCSEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred HHHhCCcEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 999999999999873 333222 2 34565 6788887
No 413
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.59 E-value=0.056 Score=51.59 Aligned_cols=94 Identities=13% Similarity=0.070 Sum_probs=60.6
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh------cc
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (394)
.|++|.|+| .|.||...++.+ +..|++|++.+++..+.. +... .|..........++.+.+ ..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~-------~Ga~~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWA-KALGAKLIGTVSSPEKAA--HAKA-------LGAWETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSHHHHH--HHHH-------HTCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--HHHH-------cCCCEEEeCCCccHHHHHHHHhCCCC
Confidence 588999999 899999999985 789999999998765421 1111 222111111112333322 25
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+-+... + .-...+..++++..++.++.
T Consensus 210 ~Dvvid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 210 CPVVYDGVGQ--D----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEEEESSCG--G----GHHHHHTTEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhcCCCEEEEEec
Confidence 7888888762 1 12456778888888888763
No 414
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.58 E-value=0.3 Score=46.76 Aligned_cols=74 Identities=16% Similarity=0.321 Sum_probs=50.8
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhccc
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.+.|.||+++|= |++..+.+..+ ..| |++|.+..|..-...+...+ .++..| ..+....+++|.++.+
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~~G~~v~~~~P~~~~~~~~~~~----~~~~~g---~~~~~~~d~~eav~~a 219 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYAL-SLFENVEMYFVSPKELRLPKDIIE----DLKAKN---IKFYEKESLDDLDDDI 219 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHH----HHHHTT---CCEEEESCGGGCCTTC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHH-HhcCCCEEEEECCcccccCHHHHH----HHHHcC---CEEEEEcCHHHHhcCC
Confidence 478999999997 58999999986 689 99999998753221111111 112222 2233356899999999
Q ss_pred CEEEEc
Q 016162 238 DVISLH 243 (394)
Q Consensus 238 DiV~l~ 243 (394)
|+|...
T Consensus 220 Dvvy~~ 225 (306)
T 4ekn_B 220 DVLYVT 225 (306)
T ss_dssp SEEEEC
T ss_pred CEEEeC
Confidence 999864
No 415
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=94.57 E-value=0.055 Score=50.17 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=33.5
Q ss_pred ccccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 160 GNLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 160 g~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
...+.||++.|.|. |.||+.+|++| ...|++|++.+++...
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l-~~~G~~V~~~~~~~~~ 54 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHL-GRLGAKVVVNYANSTK 54 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHH-HHTTCEEEEEESSCHH
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHH-HHCCCEEEEEcCCCHH
Confidence 35799999999976 58999999998 5789999987765444
No 416
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=94.56 E-value=0.093 Score=52.91 Aligned_cols=123 Identities=15% Similarity=0.131 Sum_probs=66.6
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHh-hhh-h----------hhhcCCCCccccccCCHHH
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTA-YGQ-F----------LKANGEQPVTWKRASSMDE 232 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~-~~~-~----------~~~~~~~~~~~~~~~~l~e 232 (394)
.+|||||+|.||+.+++.+...-++++. ++|++.....+ ..+. |+. + +...-.. -....+.|+++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~-~a~~~yG~~~~~~~~~~~~~i~~a~~~-g~~~v~~D~ee 101 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFK-AIRTAYGDEENAREATTESAMTRAIEA-GKIAVTDDNDL 101 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHH-HHHHHHSSSTTEEECSSHHHHHHHHHT-TCEEEESCHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHH-HHHHhcCCccccccccchhhhhhhhcc-CCceEECCHHH
Confidence 4799999999999999887434477754 66877654322 2222 120 0 0000000 01123578999
Q ss_pred Hhc--ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC-cccCHHHHHHHHHcCCcceE
Q 016162 233 VLR--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG-PVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 233 ll~--~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG-~~vde~aL~~aL~~g~l~ga 294 (394)
++. +.|+|++++|. ++... +-.+..++.|.-++...-+ .+.+-+.|.++.++..+...
T Consensus 102 LL~d~dIDaVviaTp~-p~~H~---e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~ 162 (446)
T 3upl_A 102 ILSNPLIDVIIDATGI-PEVGA---ETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYS 162 (446)
T ss_dssp HHTCTTCCEEEECSCC-HHHHH---HHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HhcCCCCCEEEEcCCC-hHHHH---HHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeee
Confidence 997 48999999984 32211 1223344555555532111 12233566766665444433
No 417
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.54 E-value=0.058 Score=51.63 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=59.5
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh------cc
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (394)
.|++|.|+| .|.||...++.+ +..|++|++.+++..+. + +.+ ..|..........++.+.+ ..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~-~-~~~-------~~ga~~~~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLL-KMKGAHTIAVASTDEKL-K-IAK-------EYGAEYLINASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSHHHH-H-HHH-------HTTCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-H-HHH-------HcCCcEEEeCCCchHHHHHHHHhCCCC
Confidence 588999999 899999999985 89999999999976542 1 111 2222111111112333322 14
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+-+... . .-...+..++++..++.++.
T Consensus 218 ~D~vid~~g~--~----~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 218 VDASFDSVGK--D----TFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEEEECCGG--G----GHHHHHHHEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhccCCEEEEEcC
Confidence 7888887752 1 12455677788888888753
No 418
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.53 E-value=0.055 Score=52.49 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=61.8
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHHhcccCEE
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (394)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..+... .. ++.|..... ...+ +.++....|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~Vi~~~~~~~~~~~-~~-------~~lGa~~vi--~~~~~~~~~~~~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIA-KAMGHHVTVISSSNKKREE-AL-------QDLGADDYV--IGSDQAKMSELADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSTTHHHH-HH-------TTSCCSCEE--ETTCHHHHHHSTTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCChHHHHH-HH-------HHcCCceee--ccccHHHHHHhcCCCCEE
Confidence 588999999999999999985 8899999999987654211 11 122322111 1122 22333468999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+-++..... -...+..++++..++.++.
T Consensus 249 id~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 249 IDTVPVHHA-----LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EECCCSCCC-----SHHHHTTEEEEEEEEECSC
T ss_pred EECCCChHH-----HHHHHHHhccCCEEEEeCC
Confidence 988863211 2455677889999988864
No 419
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=94.51 E-value=0.041 Score=52.41 Aligned_cols=103 Identities=14% Similarity=0.059 Sum_probs=62.3
Q ss_pred eEEEEec-ChHHHHHHHHHHhcCCcE-EEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--ccCEEEE
Q 016162 167 TVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (394)
Q Consensus 167 tvGIIGl-G~IG~~vA~~la~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV~l 242 (394)
++.|+|. |++|+.+++.+ ...|++ |..++|..... + . .+...+.+++++.. ..|++++
T Consensus 15 ~v~V~Gasg~~G~~~~~~l-~~~g~~~V~~VnP~~~g~-~--------------i--~G~~vy~sl~el~~~~~~Dv~ii 76 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKM-LECGTKIVGGVTPGKGGQ-N--------------V--HGVPVFDTVKEAVKETDANASVI 76 (294)
T ss_dssp CEEEETTTSHHHHHHHHHH-HHTTCCEEEEECTTCTTC-E--------------E--TTEEEESSHHHHHHHHCCCEEEE
T ss_pred EEEEECCCCCHHHHHHHHH-HhCCCeEEEEeCCCCCCc-e--------------E--CCEeeeCCHHHHhhcCCCCEEEE
Confidence 5788899 99999999987 567876 44555542100 0 0 11234578999988 8999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCc
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPM 291 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~l 291 (394)
++|. +.+...+ ++..+ ..-. .+|..+.|-. -+++.|.++.++..+
T Consensus 77 ~vp~-~~~~~~v-~ea~~-~Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi 122 (294)
T 2yv1_A 77 FVPA-PFAKDAV-FEAID-AGIE-LIVVITEHIPVHDTMEFVNYAEDVGV 122 (294)
T ss_dssp CCCH-HHHHHHH-HHHHH-TTCS-EEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred ccCH-HHHHHHH-HHHHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 9992 2333333 22222 2222 2455555422 345688888876544
No 420
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=94.51 E-value=0.097 Score=48.80 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=33.3
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
.+.||++.|.|. |.||+.+|+.| ...|++|++.+|+..
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l-~~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSF-HREGAQLAFTYATPK 58 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHH-HHTTCEEEEEESSGG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHH-HHcCCEEEEEeCCHH
Confidence 488999999997 59999999998 477999999998763
No 421
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.50 E-value=0.029 Score=56.02 Aligned_cols=39 Identities=21% Similarity=0.452 Sum_probs=34.6
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
-+.|++|+|+|-|.+|+.+++.+ +.+|.+|+++|+++..
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa-~~lG~~v~v~d~~~~~ 70 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAA-QSMGYRVAVLDPDPAS 70 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCcC
Confidence 46899999999999999999985 8999999999987543
No 422
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.48 E-value=0.046 Score=53.21 Aligned_cols=94 Identities=17% Similarity=0.136 Sum_probs=61.0
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----cc
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (394)
.|++|.|+| .|.||...++.+ +..|++|++.+++.... + +. +..|..........++.+.+. ..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a-~~~Ga~Vi~~~~~~~~~-~-~~-------~~~Ga~~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLS-KKAKCHVIGTCSSDEKS-A-FL-------KSLGCDRPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHH-HHTTCEEEEEESSHHHH-H-HH-------HHTTCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HhCCCEEEEEECCHHHH-H-HH-------HHcCCcEEEecCChhHHHHHHHhcCCCC
Confidence 588999999 799999999985 78999999999876442 1 11 112221111111124444332 47
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|+-++.. . .-...+..++++..+|.++.
T Consensus 233 D~vid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 233 DVVYESVGG--A----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEEECSCT--H----HHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCH--H----HHHHHHHHHhcCCEEEEEeC
Confidence 999888763 1 12456777888888888864
No 423
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.48 E-value=0.063 Score=51.17 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=57.8
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHH-Hh-----cc
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VL-----RE 236 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-ll-----~~ 236 (394)
.|+++.|+| .|.||..+++.+ +..|++|++.+++.... +. ...+ |..........+..+ +. ..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~V~~~~~~~~~~-~~-~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWA-KALGAKLIGTVGTAQKA-QS-ALKA-------GAWQVINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHHTCEEEEEESSHHHH-HH-HHHH-------TCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH-HH-HHHc-------CCCEEEECCCccHHHHHHHHhCCCC
Confidence 588999999 799999999986 78899999999876442 11 1111 211110001122222 21 13
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+.+.. .++ -...+..++++..++.++.
T Consensus 210 ~D~vi~~~g--~~~----~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 210 VRVVYDSVG--RDT----WERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEEECSC--GGG----HHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCc--hHH----HHHHHHHhcCCCEEEEEec
Confidence 688887775 222 2455677788888887754
No 424
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=94.47 E-value=0.093 Score=49.39 Aligned_cols=39 Identities=21% Similarity=0.223 Sum_probs=33.3
Q ss_pred cccCCCeEEEEecC-h--HHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 161 NLLKGQTVGVIGAG-R--IGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 161 ~~l~gktvGIIGlG-~--IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
..+.||++.|.|.+ . ||+.+|+.| ...|++|++.+++..
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~l-a~~G~~V~~~~r~~~ 68 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAA-REAGAELAFTYQGDA 68 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHH-HHTTCEEEEEECSHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHH-HHCCCEEEEEcCCHH
Confidence 36899999999984 4 999999998 577999999998853
No 425
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.47 E-value=0.046 Score=52.65 Aligned_cols=95 Identities=13% Similarity=0.112 Sum_probs=57.8
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcC--CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcccccc-CC-HHHHhc--cc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SS-MDEVLR--EA 237 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~ell~--~a 237 (394)
.|.+|.|+|.|.||...++.+ +.+ |++|++.+++..+.. +.+ +.|......... .+ .+++-. ..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqla-k~~~~Ga~Vi~~~~~~~~~~--~~~-------~lGa~~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQIL-KALMKNITIVGISRSKKHRD--FAL-------ELGADYVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHH-HHHCTTCEEEEECSCHHHHH--HHH-------HHTCSEEECHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHhcCCCEEEEEeCCHHHHH--HHH-------HhCCCEEeccccchHHHHHhhcCCCc
Confidence 688999999999999999985 788 999999998765421 111 122211100000 01 112221 47
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|+-++.. +.+ -...+..++++..++.++.
T Consensus 240 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDLVGT-EET----TYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEESSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCCC-hHH----HHHHHHHhhcCCEEEEeCC
Confidence 888888763 212 1445666778877777753
No 426
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.45 E-value=0.028 Score=55.35 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=47.1
Q ss_pred CCeEEEEecChHHHHHHHHHHhcC--CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~--G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
-.+|||||.| +|+.-++.+ +.. ++++. ++|++.+.. +++.+.| |. ..+.|+++++.+.|+|+
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~-~~~~~~~elvav~~~~~~~a-~~~a~~~-------gv-----~~~~~~~~l~~~~D~v~ 71 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAF-MQPPEGLELVGLLAQGSARS-RELAHAF-------GI-----PLYTSPEQITGMPDIAC 71 (372)
T ss_dssp CEEEEEECST-TTHHHHHTT-SSCCTTEEEEEEECCSSHHH-HHHHHHT-------TC-----CEESSGGGCCSCCSEEE
T ss_pred CCEEEEEehH-HHHHHHHHH-HhCCCCeEEEEEECCCHHHH-HHHHHHh-------CC-----CEECCHHHHhcCCCEEE
Confidence 3589999999 799877765 344 57766 678876542 3333333 22 23578999999999999
Q ss_pred EcCCCC
Q 016162 242 LHPVLD 247 (394)
Q Consensus 242 l~lPlt 247 (394)
+++|..
T Consensus 72 i~~p~~ 77 (372)
T 4gmf_A 72 IVVRST 77 (372)
T ss_dssp ECCC--
T ss_pred EECCCc
Confidence 999854
No 427
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.40 E-value=0.037 Score=54.65 Aligned_cols=32 Identities=22% Similarity=0.376 Sum_probs=24.6
Q ss_pred CeEEEEecChHHHHHHHHHHhc--CCcEEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~--~G~~V~~~d~ 197 (394)
.+|||+|+|+||+.++|.+... -+++|.+.+.
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd 36 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINN 36 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEec
Confidence 3799999999999999987432 3478776543
No 428
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=94.39 E-value=0.95 Score=44.19 Aligned_cols=101 Identities=11% Similarity=0.191 Sum_probs=61.6
Q ss_pred cCCCe--EEEEec---C--hHHHHHHHHHHhcCCcEEEEEcCc-hhh---HHHHHHHhhhhhhhhcCCCCccccccCCHH
Q 016162 163 LKGQT--VGVIGA---G--RIGSAYARMMVEGFKMNLIYYDLY-QAT---RLEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (394)
Q Consensus 163 l~gkt--vGIIGl---G--~IG~~vA~~la~~~G~~V~~~d~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (394)
+.|+| |+++|= | ++..+.+..+ ..||++|.+..|. .-. ...+..+++ ....| ..+....+++
T Consensus 188 l~glkvvva~vGDl~~~~nrva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~~---a~~~g---~~v~~~~d~~ 260 (359)
T 1zq6_A 188 LRGKKYVLTWTYHPKPLNTAVANSALTIA-TRMGMDVTLLCPTPDYILDERYMDWAAQN---VAESG---GSLQVSHDID 260 (359)
T ss_dssp CTTCEEEEEECCCSSCCCSHHHHHHHHHH-HHTTCEEEEECSSGGGCCCHHHHHHHHHH---HHHHS---CEEEEECCHH
T ss_pred ccCCeeEEEEEecccccccchHHHHHHHH-HHcCCEEEEEcCccccCCCHHHHHHHHHH---HHHcC---CeEEEECCHH
Confidence 88999 999986 3 8999999986 6899999999886 211 111111111 01112 1233457999
Q ss_pred HHhcccCEEEEcCCCC-----hh----------hhhcccHHHHhcCCCCcEEEEc
Q 016162 232 EVLREADVISLHPVLD-----KT----------TYHLINKERLATMKKEAILVNC 271 (394)
Q Consensus 232 ell~~aDiV~l~lPlt-----~~----------t~~li~~~~l~~mk~gailIN~ 271 (394)
|.++.+|+|..-.=.. .+ ....++.+.++.+| +++|.-|
T Consensus 261 eav~~aDvVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHc 314 (359)
T 1zq6_A 261 SAYAGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVFSHC 314 (359)
T ss_dssp HHHTTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEEECC
T ss_pred HHhcCCCEEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEEECC
Confidence 9999999996543211 10 01235566666666 6666554
No 429
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.39 E-value=0.038 Score=53.80 Aligned_cols=31 Identities=23% Similarity=0.420 Sum_probs=24.3
Q ss_pred CeEEEEecChHHHHHHHHHHhc--CCcEEEEEc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~--~G~~V~~~d 196 (394)
.+|||+|+|+||+.+.|.+... -+++|.+.+
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaIn 35 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAIN 35 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEe
Confidence 3799999999999999987433 347877654
No 430
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.38 E-value=0.024 Score=53.47 Aligned_cols=74 Identities=20% Similarity=0.144 Sum_probs=44.8
Q ss_pred CeEEEEec-ChHHHHHHHHHHhcCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEc
Q 016162 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (394)
Q Consensus 166 ktvGIIGl-G~IG~~vA~~la~~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~ 243 (394)
.+|+|+|+ |+||+.+++.++..-|+++. ++|+........ .. ....+....+.....++++++..+|+|+-+
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~---d~---~~~~g~~~~~v~~~~dl~~~l~~~DvVIDf 79 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS---DA---GELAGAGKTGVTVQSSLDAVKDDFDVFIDF 79 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC---CT---TCSSSSSCCSCCEESCSTTTTTSCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhh---hH---HHHcCCCcCCceecCCHHHHhcCCCEEEEc
Confidence 48999998 99999999986445688876 677754320000 00 000011111122245778888899999955
Q ss_pred CC
Q 016162 244 PV 245 (394)
Q Consensus 244 lP 245 (394)
++
T Consensus 80 t~ 81 (273)
T 1dih_A 80 TR 81 (273)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 431
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.31 E-value=0.043 Score=52.73 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=59.8
Q ss_pred CCCeEEEEecC-hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh------cc
Q 016162 164 KGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (394)
Q Consensus 164 ~gktvGIIGlG-~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (394)
.|++|.|+|.| .||...++.+ +..|++|++.+++..+.. +... .|..........++.+.+ ..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~~~-------lga~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLS-QILNFRLIAVTRNNKHTE--ELLR-------LGAAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSSTTHH--HHHH-------HTCSEEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEeCCccHHHHHHHHHH-HHcCCEEEEEeCCHHHHH--HHHh-------CCCcEEEeCCcccHHHHHHHHhCCCC
Confidence 58899999998 9999999985 789999999998765421 1111 122111111112333322 25
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+-|+.. +.+ ...+..++++..++.++-
T Consensus 214 ~Dvvid~~g~-~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 214 ADAAIDSIGG-PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEEESSCH-HHH-----HHHHHTEEEEEEEEECCC
T ss_pred CcEEEECCCC-hhH-----HHHHHHhcCCCEEEEEee
Confidence 7888888762 222 234567888888888864
No 432
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.28 E-value=0.26 Score=47.97 Aligned_cols=96 Identities=20% Similarity=0.186 Sum_probs=61.2
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh---cccCE
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL---READV 239 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell---~~aDi 239 (394)
.|++|.|+| .|.||...++.+ +..|++|++.++ ..+ .+ +.+ ..|..........++.+.+ ...|+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla-~~~Ga~Vi~~~~-~~~-~~-~~~-------~lGa~~v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVM-KAWDAHVTAVCS-QDA-SE-LVR-------KLGADDVIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEEC-GGG-HH-HHH-------HTTCSEEEETTSSCHHHHHHTSCCBSE
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HhCCCEEEEEeC-hHH-HH-HHH-------HcCCCEEEECCchHHHHHHhhcCCCCE
Confidence 588999999 799999999985 889999998874 322 22 112 2232211111112443333 35899
Q ss_pred EEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 240 V~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
|+-++.....+ -...+..++++..++.++..
T Consensus 252 vid~~g~~~~~----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 252 ILDNVGGSTET----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp EEESSCTTHHH----HGGGGBCSSSCCEEEESCCS
T ss_pred EEECCCChhhh----hHHHHHhhcCCcEEEEeCCC
Confidence 99998743121 13456778999999999754
No 433
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.24 E-value=0.1 Score=49.64 Aligned_cols=38 Identities=24% Similarity=0.521 Sum_probs=32.2
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCch
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ 199 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~ 199 (394)
..|++++|.|||.|.+|..+|+.|+ ..|. ++..+|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La-~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLT-RCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHH-HcCCCEEEEECCCc
Confidence 4689999999999999999999985 4454 788888765
No 434
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.19 E-value=0.11 Score=49.87 Aligned_cols=91 Identities=9% Similarity=0.150 Sum_probs=57.8
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHH-hcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (394)
.+++.|+|+|.+|+.+++.| ...|. |++.|++++... .. +.+.. .......+ ++++ +.+||.|
T Consensus 115 ~~~viI~G~G~~g~~l~~~L-~~~g~-v~vid~~~~~~~--~~--------~~~~~-~i~gd~~~~~~L~~a~i~~a~~v 181 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRKK--VL--------RSGAN-FVHGDPTRVSDLEKANVRGARAV 181 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTG-GGSCE-EEEESCGGGHHH--HH--------HTTCE-EEESCTTSHHHHHHTCSTTEEEE
T ss_pred cCCEEEECCcHHHHHHHHHH-HhCCc-EEEEeCChhhhh--HH--------hCCcE-EEEeCCCCHHHHHhcChhhccEE
Confidence 56899999999999999997 68888 999999875432 11 11111 11111223 3444 7789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEE
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVN 270 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN 270 (394)
+++++.+ ...+.-......+.+...+|-
T Consensus 182 i~~~~~d--~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 182 IVDLESD--SETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EECCSSH--HHHHHHHHHHHTTCTTSEEEE
T ss_pred EEcCCcc--HHHHHHHHHHHHHCCCCeEEE
Confidence 9999843 333444556666777644443
No 435
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.08 E-value=0.25 Score=50.10 Aligned_cols=112 Identities=13% Similarity=0.093 Sum_probs=70.6
Q ss_pred ccCCCeEEEEec----------ChHHHHHHHHHHhcCCcEEEEEcCchhhHH--HHHHHhhhhhhhhcCCCCccccccCC
Q 016162 162 LLKGQTVGVIGA----------GRIGSAYARMMVEGFKMNLIYYDLYQATRL--EKFVTAYGQFLKANGEQPVTWKRASS 229 (394)
Q Consensus 162 ~l~gktvGIIGl----------G~IG~~vA~~la~~~G~~V~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (394)
.+.|++|+|+|+ ..-...+++.| ...|++|.+|||...... ......|+..... .......+
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 405 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHL-MEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVE-----RLITVESD 405 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHH-----HHEEEESS
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHH-HHCCCEEEEECCCCCchhhHHHHHhhhcccccc-----CceeecCC
Confidence 589999999997 45678899997 788999999999864321 1111101000000 00112357
Q ss_pred HHHHhcccCEEEEcCCCChhhhhcccHHH-HhcCCCCcEEEEcCCCcccCHHHHH
Q 016162 230 MDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSRGPVIDEVALV 283 (394)
Q Consensus 230 l~ell~~aDiV~l~lPlt~~t~~li~~~~-l~~mk~gailIN~aRG~~vde~aL~ 283 (394)
+++.++.+|.|++++.- ++-+. ++-+. .+.|+...+++|. |+ ++|.+.+.
T Consensus 406 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~~ 456 (481)
T 2o3j_A 406 PYAAARGAHAIVVLTEW-DEFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKALR 456 (481)
T ss_dssp HHHHHTTCSEEEECSCC-GGGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHHH
T ss_pred HHHHHcCCCEEEEcCCc-HHhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHHH
Confidence 78899999999999873 34333 35444 4567777688886 53 55665443
No 436
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.02 E-value=0.35 Score=46.64 Aligned_cols=95 Identities=18% Similarity=0.126 Sum_probs=60.4
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcE-EEEEcCchhhHHHHHHHhhhhhhhhcCCCCcccc----ccCCHHHHh----
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK----RASSMDEVL---- 234 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~ell---- 234 (394)
.|.+|.|+|.|.+|...++.+ +.+|++ |++.+++..+.. +.+.+ ........ ...++.+.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a~~l-------~~~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCA-KAAGACPLVITDIDEGRLK--FAKEI-------CPEVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEEESCHHHHH--HHHHH-------CTTCEEEECCSCCHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HHHHh-------chhcccccccccchHHHHHHHHHHh
Confidence 478999999999999999984 899997 999988765421 11111 10000000 001222222
Q ss_pred --cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 235 --READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 235 --~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
...|+|+-++.. +.+. ...+..++++..++.++-
T Consensus 249 ~g~g~Dvvid~~g~-~~~~----~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 249 GGIEPAVALECTGV-ESSI----AAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp SSCCCSEEEECSCC-HHHH----HHHHHHSCTTCEEEECCC
T ss_pred CCCCCCEEEECCCC-hHHH----HHHHHHhcCCCEEEEEcc
Confidence 258999999862 2221 456778899999999874
No 437
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.02 E-value=0.081 Score=53.56 Aligned_cols=73 Identities=21% Similarity=0.285 Sum_probs=48.9
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC---HHHH-hcccCEE
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (394)
.++|-|+|+|++|+.+|+.| ...|.+|++.|.++... +...+.+ +...+ .....+ |++. +.+||++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L-~~~~~~v~vId~d~~~~-~~~~~~~-------~~~~i-~Gd~~~~~~L~~Agi~~ad~~ 72 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENL-VGENNDITIVDKDGDRL-RELQDKY-------DLRVV-NGHASHPDVLHEAGAQDADML 72 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHT-CSTTEEEEEEESCHHHH-HHHHHHS-------SCEEE-ESCTTCHHHHHHHTTTTCSEE
T ss_pred cCEEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHH-HHHHHhc-------CcEEE-EEcCCCHHHHHhcCCCcCCEE
Confidence 46899999999999999997 68899999999987542 2221211 11111 111223 4444 6889999
Q ss_pred EEcCCCC
Q 016162 241 SLHPVLD 247 (394)
Q Consensus 241 ~l~lPlt 247 (394)
+.+++.+
T Consensus 73 ia~t~~D 79 (461)
T 4g65_A 73 VAVTNTD 79 (461)
T ss_dssp EECCSCH
T ss_pred EEEcCCh
Confidence 9888743
No 438
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=94.01 E-value=0.1 Score=49.80 Aligned_cols=36 Identities=19% Similarity=0.002 Sum_probs=29.7
Q ss_pred cCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCch
Q 016162 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (394)
Q Consensus 163 l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~ 199 (394)
...++|.|+|. |.||+.+++.| ...|.+|++.+|..
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L-~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATAS-LDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHH-HHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHH-HHCCCCEEEEECCC
Confidence 34679999998 99999999998 56789999999876
No 439
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.99 E-value=0.1 Score=52.61 Aligned_cols=90 Identities=17% Similarity=0.223 Sum_probs=62.4
Q ss_pred cccCCCeEEEEecC----------hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCH
Q 016162 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (394)
Q Consensus 161 ~~l~gktvGIIGlG----------~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (394)
..++|++|+|+|+. .=...+++.| ...|++|.+|||....... ..|+. ......++
T Consensus 329 ~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L-~~~Ga~V~~~DP~~~~~~~---~~~~~----------~~~~~~~~ 394 (444)
T 3vtf_A 329 GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLL-LERGARVYVHDPMAMEKAR---AVLGD----------SVTYVEDP 394 (444)
T ss_dssp TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECSSTHHHHH---HHHGG----------GSEECSCH
T ss_pred cccCCCEEEEEeeecCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChHHH---HhcCC----------CceecCCH
Confidence 36899999999986 2377889987 7999999999998643221 11211 12235689
Q ss_pred HHHhcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016162 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (394)
Q Consensus 231 ~ell~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG 274 (394)
++.+..+|.|+++++ .++-+.+ + + ++.+++|. |+
T Consensus 395 ~~a~~~aDavvi~t~-h~ef~~l-d------~-~~~vv~D~-Rn 428 (444)
T 3vtf_A 395 QALLDQVEGVIIATA-WPQYEGL-D------Y-RGKVVVDG-RY 428 (444)
T ss_dssp HHHHHHCSEEEECSC-CGGGGGS-C------C-TTCEEEES-SC
T ss_pred HHHHhCCCEEEEccC-CHHHhCC-C------c-CCCEEEEC-CC
Confidence 999999999999987 3333222 2 2 46788885 53
No 440
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.97 E-value=0.16 Score=48.91 Aligned_cols=92 Identities=12% Similarity=0.069 Sum_probs=59.1
Q ss_pred CeEEEE-ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh------cccC
Q 016162 166 QTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------READ 238 (394)
Q Consensus 166 ktvGII-GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~aD 238 (394)
+++.|. |.|.||...++.+ +.+|++|++.+++..+.. +... .|..........++.+.+ ...|
T Consensus 166 ~~vli~gg~g~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~~~-------~Ga~~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLA-KEEGFRPIVTVRRDEQIA--LLKD-------IGAAHVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESCGGGHH--HHHH-------HTCSEEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--HHHH-------cCCCEEEECCcHHHHHHHHHHhcCCCCc
Confidence 567665 9999999999985 889999999998765421 1112 232111111112333332 2589
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+|+-|+.. +. + ...+..++++..++.++.
T Consensus 236 ~vid~~g~-~~----~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 236 IFLDAVTG-PL----A-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEEESSCH-HH----H-HHHHHHSCTTCEEEECCC
T ss_pred EEEECCCC-hh----H-HHHHhhhcCCCEEEEEec
Confidence 99988762 21 1 557788999999999863
No 441
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.95 E-value=0.16 Score=47.00 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=32.5
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCc
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~ 198 (394)
..+.||++.|.|. |.||+.+|+.| ...|++|++.|+.
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l-~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKL-AEEGADIILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHH-HHCCCeEEEEccc
Confidence 4689999999985 68999999998 5789999999886
No 442
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.92 E-value=0.1 Score=50.16 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=32.9
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.|+++.|+|. |.||..+++.+ +..|++|++.+++...
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a-~~~G~~Vi~~~~~~~~ 203 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIA-KLFGARVIATAGSEDK 203 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHH-HHTTCEEEEEESSHHH
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCEEEEEeCCHHH
Confidence 5889999999 99999999985 7899999999987654
No 443
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.90 E-value=0.08 Score=51.47 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=54.1
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCch---hhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ---ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
.+|+|+| .|.+|+++.++|..--+.++..+..+. .. -....+.|.. ++ +.....+....+.++++.++|+|+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~sa-Gk~~~~~~p~-~~--~~~~~~v~~~~~~~~~~~~~Dvvf 80 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDA-GKLISDLHPQ-LK--GIVELPLQPMSDISEFSPGVDVVF 80 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTT-TSBHHHHCGG-GT--TTCCCBEEEESSGGGTCTTCSEEE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhc-CCchHHhCcc-cc--CccceeEeccCCHHHHhcCCCEEE
Confidence 5899999 699999999998433456776654332 11 0001111110 11 111111111104455558999999
Q ss_pred EcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+|+|... +..+. ... .+.|+.+|+.|.
T Consensus 81 ~a~p~~~-s~~~~-~~~---~~~g~~vIDlSa 107 (337)
T 3dr3_A 81 LATAHEV-SHDLA-PQF---LEAGCVVFDLSG 107 (337)
T ss_dssp ECSCHHH-HHHHH-HHH---HHTTCEEEECSS
T ss_pred ECCChHH-HHHHH-HHH---HHCCCEEEEcCC
Confidence 9999322 22221 222 357999999875
No 444
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=93.89 E-value=0.083 Score=51.48 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=50.8
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEc-CchhhHHHHHHHhhhhhhhh---cCCCCccccccCCHHHHhcccCEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYD-LYQATRLEKFVTAYGQFLKA---NGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
.+|||+| +|.||+.+.+.|...=.+++.+.. ..... ...+.+.|...... .+.....+.. .+.++ +..+|+|
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~-~~~vDvV 81 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI-GKKYKDAVKWIEQGDIPEEVQDLPIVS-TNYED-HKDVDVV 81 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT-TSBHHHHCCCCSSSSCCHHHHTCBEEC-SSGGG-GTTCSEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc-CCCHHHhcCcccccccccCCceeEEee-CCHHH-hcCCCEE
Confidence 5899999 899999999987432356777663 22111 01111111100000 0000111111 13344 4789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
++|+|... +..+. ... ++.|+.+|+.+.
T Consensus 82 f~atp~~~-s~~~a-~~~---~~aG~~VId~s~ 109 (350)
T 2ep5_A 82 LSALPNEL-AESIE-LEL---VKNGKIVVSNAS 109 (350)
T ss_dssp EECCCHHH-HHHHH-HHH---HHTTCEEEECSS
T ss_pred EECCChHH-HHHHH-HHH---HHCCCEEEECCc
Confidence 99998322 22221 222 346777888763
No 445
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=93.89 E-value=0.05 Score=52.80 Aligned_cols=29 Identities=28% Similarity=0.505 Sum_probs=24.1
Q ss_pred eEEEEecChHHHHHHHHHHhcCCcEEEEEc
Q 016162 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (394)
Q Consensus 167 tvGIIGlG~IG~~vA~~la~~~G~~V~~~d 196 (394)
+|||+|+|+||+.+.|.+... +++|.+.+
T Consensus 2 kVgInG~G~IGr~vlr~l~~~-~~evvain 30 (331)
T 2g82_O 2 KVGINGFGRIGRQVFRILHSR-GVEVALIN 30 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEE
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCEEEEEe
Confidence 799999999999999987444 88887544
No 446
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.87 E-value=0.098 Score=51.17 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=57.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCC-cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc---cCCHHH----Hhc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDE----VLR 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~e----ll~ 235 (394)
.|.+|.|+|.|.+|...++.+ +.+| .+|++.+++..+.. + ++..|........ ..++.+ +..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIA-RSLGAENVIVIAGSPNRLK--L-------AEEIGADLTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHH-HHTTBSEEEEEESCHHHHH--H-------HHHTTCSEEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHH-HHcCCceEEEEcCCHHHHH--H-------HHHcCCcEEEeccccCcchHHHHHHHHhC
Confidence 478999999999999999985 8999 59999998765421 1 1122321110000 011212 111
Q ss_pred --ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 236 --EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 236 --~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
..|+|+-++..... -...+..++++..++.++.
T Consensus 265 g~g~Dvvid~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 265 GRGADFILEATGDSRA-----LLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TSCEEEEEECSSCTTH-----HHHHHHHEEEEEEEEECCC
T ss_pred CCCCcEEEECCCCHHH-----HHHHHHHHhcCCEEEEEec
Confidence 47888888753211 1345666778878887754
No 447
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.85 E-value=0.1 Score=46.89 Aligned_cols=73 Identities=18% Similarity=0.139 Sum_probs=48.3
Q ss_pred cCCCeEEEEe-cChHHHHHHHHHHhcC--CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhccc
Q 016162 163 LKGQTVGVIG-AGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (394)
Q Consensus 163 l~gktvGIIG-lG~IG~~vA~~la~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~a 237 (394)
..++++.|.| .|.||+.+++.|+ .. |.+|++.+|+.... +. + ..+.... ......+++++++..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~-~~~~g~~V~~~~r~~~~~-~~--------~-~~~~~~~~~D~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLK-EGSDKFVAKGLVRSAQGK-EK--------I-GGEADVFIGDITDADSINPAFQGI 70 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHH-HTTTTCEEEEEESCHHHH-HH--------T-TCCTTEEECCTTSHHHHHHHHTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHH-hcCCCcEEEEEEcCCCch-hh--------c-CCCeeEEEecCCCHHHHHHHHcCC
Confidence 3578999998 6999999999984 55 89999999976432 11 0 0011000 011123466788899
Q ss_pred CEEEEcCCC
Q 016162 238 DVISLHPVL 246 (394)
Q Consensus 238 DiV~l~lPl 246 (394)
|+|+.+...
T Consensus 71 d~vi~~a~~ 79 (253)
T 1xq6_A 71 DALVILTSA 79 (253)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeccc
Confidence 999887653
No 448
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.84 E-value=0.2 Score=47.63 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=56.2
Q ss_pred CeEEEEe-cChHHHHHHHHHHh-cCCcEEEEEcC--chhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVE-GFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~-~~G~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~ 241 (394)
.+|+|+| .|.+|+.++..|+. +..-++..+|+ .... .+.......+... .. ....... .+ .+.++.||+|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~-~~~~~~dl~~~~~-~~-~~~~v~~-~~-~~a~~~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDD-TVGQAADTNHGIA-YD-SNTRVRQ-GG-YEDTAGSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHH-HHHHHHHHHHHHT-TT-CCCEEEE-CC-GGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhh-HHHHHHHHHHHHh-hC-CCcEEEe-CC-HHHhCCCCEEE
Confidence 3799999 99999999988743 22337888998 5432 1111111111000 00 1111111 23 56799999999
Q ss_pred EcCCCChh---hh-hc--cc----H---HHHhcCCCCcEEEEcCC
Q 016162 242 LHPVLDKT---TY-HL--IN----K---ERLATMKKEAILVNCSR 273 (394)
Q Consensus 242 l~lPlt~~---t~-~l--i~----~---~~l~~mk~gailIN~aR 273 (394)
++...... ++ .+ .| . +.+....+.+++++++.
T Consensus 76 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 88753221 11 01 11 1 22333467899999754
No 449
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=93.80 E-value=0.058 Score=49.69 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=33.1
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
.+.||++.|.|. |.||+.+|+.|+ ..|++|++.+|+..
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 45 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAER 45 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHH-HHTCEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 578999999997 699999999984 66999999998763
No 450
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.78 E-value=0.16 Score=48.13 Aligned_cols=109 Identities=13% Similarity=0.104 Sum_probs=70.5
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
+.|++|.|+|........++.| ...|.+|..+.-.... | ...+.....++.+.++++|+|+.
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L-~~~g~~v~~~~~~~~~--------~---------~~~g~~~~~~~~~~~~~~d~ii~ 66 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKL-TEQQADIYLVGFDQLD--------H---------GFTGAVKCNIDEIPFQQIDSIIL 66 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHH-HHTTCEEEEESCTTSS--------C---------CCTTEEECCGGGSCGGGCSEEEC
T ss_pred ccCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeccccc--------c---------ccccceeccchHHHHhcCCEEEe
Confidence 6788999999999999999998 6789998876321110 0 00011122356677889999987
Q ss_pred cCCCCh----------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016162 243 HPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (394)
Q Consensus 243 ~lPlt~----------~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l~ga 294 (394)
..|... .+...++++.++.++++.+++ + ++ |..++.+++.+..+.-.
T Consensus 67 ~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~-~---g~-~~~d~~~~~~~~gi~v~ 123 (300)
T 2rir_A 67 PVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF-S---GI-SNAYLENIAAQAKRKLV 123 (300)
T ss_dssp CSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE-E---SS-CCHHHHHHHHHTTCCEE
T ss_pred ccccccCCcccccccccCCccchHHHHhhcCCCCEEE-E---ec-CCHHHHHHHHHCCCEEE
Confidence 554321 223347889999999998887 2 33 56665555555545443
No 451
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.75 E-value=0.099 Score=50.36 Aligned_cols=93 Identities=17% Similarity=0.236 Sum_probs=57.1
Q ss_pred CCCeEEEE-ecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----cc
Q 016162 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (394)
Q Consensus 164 ~gktvGII-GlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (394)
.|++|.|+ |.|.||...++.+ +.+|++|++.+++..+. + +.. ..|.... .....++.+.+. ..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~-~-~~~-------~lGa~~v-i~~~~~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIA-KAYGLRVITTASRNETI-E-WTK-------KMGADIV-LNHKESLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHH-HHTTCEEEEECCSHHHH-H-HHH-------HHTCSEE-ECTTSCHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHH-H-HHH-------hcCCcEE-EECCccHHHHHHHhCCCCc
Confidence 68999999 7999999999985 89999999999876542 1 111 1222111 111123333322 36
Q ss_pred CEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016162 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (394)
Q Consensus 238 DiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~a 272 (394)
|+|+-|+.. +.+ -...+..++++..+|.++
T Consensus 219 Dvv~d~~g~-~~~----~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 219 DYVFCTFNT-DMY----YDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEEEESSCH-HHH----HHHHHHHEEEEEEEEESS
T ss_pred cEEEECCCc-hHH----HHHHHHHhccCCEEEEEC
Confidence 888777651 111 134456677777777664
No 452
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=93.64 E-value=0.18 Score=51.24 Aligned_cols=76 Identities=17% Similarity=0.300 Sum_probs=45.6
Q ss_pred CeEEEEecChHHHHH--HHHHHh--cC---CcEEEEEcCchhhHHHHHHHhhhhh-hhhcCCCCccccccCCHHHHhccc
Q 016162 166 QTVGVIGAGRIGSAY--ARMMVE--GF---KMNLIYYDLYQATRLEKFVTAYGQF-LKANGEQPVTWKRASSMDEVLREA 237 (394)
Q Consensus 166 ktvGIIGlG~IG~~v--A~~la~--~~---G~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ell~~a 237 (394)
.||+|||.|++|... ..-++. .+ +.++..+|.......... ..... ....+ ....+....|.++.++.|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~--~~~~~~~~~~~-~~~~i~~t~d~~eAl~gA 77 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASY--ILARKYVEELN-SPVKVVKTESLDEAIEGA 77 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHH--HHHHHHHHHHT-CCCEEEEESCHHHHHTTC
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHH--HHHHHHHHHcC-CCeEEEEeCCHHHHhCCC
Confidence 379999999998652 221222 23 458999999875421111 01111 11122 233344557899999999
Q ss_pred CEEEEcC
Q 016162 238 DVISLHP 244 (394)
Q Consensus 238 DiV~l~l 244 (394)
|+|+++.
T Consensus 78 D~Vi~~~ 84 (477)
T 3u95_A 78 DFIINTA 84 (477)
T ss_dssp SEEEECC
T ss_pred CEEEECc
Confidence 9999886
No 453
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.63 E-value=0.11 Score=51.10 Aligned_cols=98 Identities=15% Similarity=0.064 Sum_probs=61.0
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCH-HHHh----c--
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVL----R-- 235 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell----~-- 235 (394)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..+. + + ++..|.. .......++ .+.+ .
T Consensus 185 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~-~-~-------a~~lGa~-~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGA-RLLGAACVIVGDQNPERL-K-L-------LSDAGFE-TIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEEESCHHHH-H-H-------HHTTTCE-EEETTSSSCHHHHHHHHHSSS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHH-H-H-------HHHcCCc-EEcCCCcchHHHHHHHHhCCC
Confidence 588999999999999999984 88999 999999876542 1 1 1222321 111111221 2222 1
Q ss_pred ccCEEEEcCCCChh----------hhhcccHHHHhcCCCCcEEEEcCC
Q 016162 236 EADVISLHPVLDKT----------TYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~----------t~~li~~~~l~~mk~gailIN~aR 273 (394)
..|+|+-++..... .... -...+..++++..++.++.
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~-~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGA-LNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHH-HHHHHHHEEEEEEEECCSC
T ss_pred CCCEEEECCCCccccccccccccccHHH-HHHHHHHHhcCCEEEEecc
Confidence 48999988864210 0001 2456777888888888764
No 454
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=93.63 E-value=0.072 Score=49.10 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=32.5
Q ss_pred ccCCCeEEEEec---ChHHHHHHHHHHhcCCcEEEEEcCch
Q 016162 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (394)
Q Consensus 162 ~l~gktvGIIGl---G~IG~~vA~~la~~~G~~V~~~d~~~ 199 (394)
.+.||++.|.|. |.||+.+|+.| ...|++|++.+|+.
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l-~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAM-HREGAELAFTYQND 45 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHH-HHTTCEEEEEESST
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHH-HHCCCEEEEEcCcH
Confidence 478999999997 69999999998 47799999999876
No 455
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.58 E-value=0.088 Score=50.49 Aligned_cols=95 Identities=17% Similarity=0.176 Sum_probs=59.6
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcc-ccccCCHHHHhc-----c
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT-WKRASSMDEVLR-----E 236 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ell~-----~ 236 (394)
.|++|.|+|. |.||..+++.+ +..|++|++.+++.... +...+ ..|..... .....++.+.+. .
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a-~~~G~~V~~~~~~~~~~-~~~~~-------~~g~~~~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLA-KMMGCYVVGSAGSKEKV-DLLKT-------KFGFDDAFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHH-HHHHH-------TSCCSEEEETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HHHHH-------HcCCceEEecCCHHHHHHHHHHHhCCC
Confidence 5889999997 99999999985 78999999999876542 11110 12221110 001113333332 4
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+.+... . .-...+..++++..++.++-
T Consensus 226 ~d~vi~~~g~--~----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 226 IDIYFENVGG--K----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp EEEEEESSCH--H----HHHHHHTTEEEEEEEEECCC
T ss_pred CcEEEECCCH--H----HHHHHHHHHhcCCEEEEEcc
Confidence 7888888752 1 12456777888888888754
No 456
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.53 E-value=0.18 Score=49.53 Aligned_cols=100 Identities=20% Similarity=0.126 Sum_probs=60.5
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh------cc
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (394)
.|.+|.|+|.|.||...++. ++.+|+ +|++.|++..+. + + ++..|...+......++.+.+ ..
T Consensus 185 ~g~~VlV~GaG~vG~~aiql-Ak~~Ga~~Vi~~~~~~~~~-~-~-------a~~lGa~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAAS-ARLLGAAVVIVGDLNPARL-A-H-------AKAQGFEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHH-HHHTTCSEEEEEESCHHHH-H-H-------HHHTTCEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECCcHHHHHHHHH-HHHCCCCeEEEEcCCHHHH-H-H-------HHHcCCcEEccCCcchHHHHHHHHhCCCC
Confidence 57899999999999999998 489999 799999876542 1 1 122233111111111233222 14
Q ss_pred cCEEEEcCCCChhh-----hh-----cccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTT-----YH-----LINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t-----~~-----li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+-++...... .+ -.-...+..++++..++.++-
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 79999888642100 00 011456677888888888763
No 457
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.52 E-value=0.11 Score=50.05 Aligned_cols=72 Identities=22% Similarity=0.307 Sum_probs=46.8
Q ss_pred CCeEEEEe-cChHHHHHHHHHHhcCC--cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccc---cCCHHHHhcccC
Q 016162 165 GQTVGVIG-AGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREAD 238 (394)
Q Consensus 165 gktvGIIG-lG~IG~~vA~~la~~~G--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~aD 238 (394)
..+|+|+| .|.+|..++..|+ ..| .+|..+|........ .+ +.+... ...... ..++++.++.||
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~-~~g~~~ev~l~Di~~~~~~~--~d-----L~~~~~-~~~v~~~~~t~d~~~al~gaD 78 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMK-MNPLVSVLHLYDVVNAPGVT--AD-----ISHMDT-GAVVRGFLGQQQLEAALTGMD 78 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHH-HCTTEEEEEEEESSSHHHHH--HH-----HHTSCS-SCEEEEEESHHHHHHHHTTCS
T ss_pred CCEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEeCCCcHhHH--HH-----hhcccc-cceEEEEeCCCCHHHHcCCCC
Confidence 35899999 8999999999874 456 689999976542111 00 111111 111111 236778899999
Q ss_pred EEEEcCC
Q 016162 239 VISLHPV 245 (394)
Q Consensus 239 iV~l~lP 245 (394)
+|+++.+
T Consensus 79 vVi~~ag 85 (326)
T 1smk_A 79 LIIVPAG 85 (326)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9999976
No 458
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.52 E-value=0.046 Score=50.72 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=31.6
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
.+++|.|.|.|.||+.+++.| ...|.+|++.+|...
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L-~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRL-TAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHH-HHTTCCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCcc
Confidence 367999999999999999998 577999999998754
No 459
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.52 E-value=0.12 Score=49.94 Aligned_cols=37 Identities=14% Similarity=0.015 Sum_probs=32.7
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.|+++.|+| .|.||..+++.+ +..|++|++.+++...
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~Vi~~~~~~~~ 199 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLT-RMAGAIPLVTAGSQKK 199 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESCHHH
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHcCCEEEEEeCCHHH
Confidence 588999999 799999999986 7899999999987654
No 460
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.50 E-value=0.15 Score=48.91 Aligned_cols=94 Identities=14% Similarity=0.148 Sum_probs=60.2
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHH----Hhc--c
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VLR--E 236 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----ll~--~ 236 (394)
.|.+|.|+|.|.+|...++.+ +.. |.+|++.|++.++.. + ++..|...... ...++.+ +.. .
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla-~~~g~~~Vi~~~~~~~~~~--~-------~~~lGa~~~i~-~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQIL-RAVSAARVIAVDLDDDRLA--L-------AREVGADAAVK-SGAGAADAIRELTGGQG 239 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHCCCEEEEEESCHHHHH--H-------HHHTTCSEEEE-CSTTHHHHHHHHHGGGC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHH--H-------HHHcCCCEEEc-CCCcHHHHHHHHhCCCC
Confidence 588999999999999999885 776 789999998875431 1 12223222111 1112222 222 5
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
.|+|+-++.. +.+ -...+..++++..++.++-
T Consensus 240 ~d~v~d~~G~-~~~----~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 240 ATAVFDFVGA-QST----IDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEEEEESSCC-HHH----HHHHHHHEEEEEEEEECSC
T ss_pred CeEEEECCCC-HHH----HHHHHHHHhcCCEEEEECC
Confidence 8899888863 222 1455677888888888763
No 461
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=93.49 E-value=0.1 Score=49.76 Aligned_cols=107 Identities=18% Similarity=0.112 Sum_probs=62.8
Q ss_pred cCCC-eEEEEec-ChHHHHHHHHHHhcCCcE-EEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc--c-
Q 016162 163 LKGQ-TVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--E- 236 (394)
Q Consensus 163 l~gk-tvGIIGl-G~IG~~vA~~la~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~- 236 (394)
+.-+ ++.|+|. |++|+.+++.+ ...|++ |..++|..... + . .+...+.+++++.. .
T Consensus 10 ~~~~~~vvV~Gasg~~G~~~~~~l-~~~g~~~v~~VnP~~~g~-~--------------i--~G~~vy~sl~el~~~~~~ 71 (297)
T 2yv2_A 10 VDSETRVLVQGITGREGSFHAKAM-LEYGTKVVAGVTPGKGGS-E--------------V--HGVPVYDSVKEALAEHPE 71 (297)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-E--------------E--TTEEEESSHHHHHHHCTT
T ss_pred hCCCCEEEEECCCCCHHHHHHHHH-HhCCCcEEEEeCCCCCCc-e--------------E--CCEeeeCCHHHHhhcCCC
Confidence 3334 4677798 99999999987 566887 44566543100 0 0 12234578999887 5
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCc
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPM 291 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~l 291 (394)
.|++++++|. +.+...+ ++..+ ..-. .+|..+.|=. .+++.|.++.++..+
T Consensus 72 ~DvaIi~vp~-~~~~~~v-~ea~~-~Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi 123 (297)
T 2yv2_A 72 INTSIVFVPA-PFAPDAV-YEAVD-AGIR-LVVVITEGIPVHDTMRFVNYARQKGA 123 (297)
T ss_dssp CCEEEECCCG-GGHHHHH-HHHHH-TTCS-EEEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEecCH-HHHHHHH-HHHHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 9999999993 3333333 22222 2222 2444555422 345678887776544
No 462
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.49 E-value=0.38 Score=46.93 Aligned_cols=96 Identities=13% Similarity=0.174 Sum_probs=56.9
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEE
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l 242 (394)
+-.+||||| .|.+|+++.++|..-=..++......... -..+.+.|.. ++ ....+.. .+.++++.++|+|++
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~a-G~~~~~~~p~-~~----~~l~~~~-~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYA-GKKLEEIFPS-TL----ENSILSE-FDPEKVSKNCDVLFT 84 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTT-TSBHHHHCGG-GC----CCCBCBC-CCHHHHHHHCSEEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccc-cCChHHhChh-hc----cCceEEe-CCHHHhhcCCCEEEE
Confidence 446899996 79999999999843224566655432211 0111111111 11 1122222 356676688999999
Q ss_pred cCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 243 ~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
|+|.... .+....+ .|+.+||.|.
T Consensus 85 alp~~~s------~~~~~~~-~g~~VIDlSs 108 (351)
T 1vkn_A 85 ALPAGAS------YDLVREL-KGVKIIDLGA 108 (351)
T ss_dssp CCSTTHH------HHHHTTC-CSCEEEESSS
T ss_pred CCCcHHH------HHHHHHh-CCCEEEECCh
Confidence 9994432 3444445 7999999984
No 463
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.48 E-value=0.07 Score=51.75 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=59.1
Q ss_pred CeEEEEecChHHHHHHHHHHhcC---------CcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGF---------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~---------G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (394)
.+|||||+|.||+.+++.+. .. +++|. ++|++..+. .+. +. .....|+++++
T Consensus 4 irvgIiG~G~VG~~~~~~l~-~~~~~l~~~g~~~~lvaV~d~~~~~~--------------~~~-~~-~~~~~d~~~ll- 65 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVL-ERAEELSAFGVVPRFLGVLVRDPRKP--------------RAI-PQ-ELLRAEPFDLL- 65 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HTGGGGGGGTEEEEEEEEECSCTTSC--------------CSS-CG-GGEESSCCCCT-
T ss_pred eEEEEEcCCHHHHHHHHHHH-hChhhHhhcCCCEEEEEEEECCHHHh--------------hcc-Cc-ccccCCHHHHh-
Confidence 37999999999999998873 33 45654 567664321 011 11 11235777888
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN 289 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g 289 (394)
+.|+|+.|+|........ ..+.++.|.-+|...-..+ -.-+.|.++.++.
T Consensus 66 ~iDvVve~t~~~~~a~~~----~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRL----VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp TCSEEEECCCCSHHHHHH----HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred CCCEEEECCCCcHHHHHH----HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 999999999854221111 1223445555555321111 3556777776665
No 464
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.44 E-value=0.13 Score=49.01 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=32.4
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.|+++.|+|. |.||..+++.+ +..|++|++.+++...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~Vi~~~~~~~~ 182 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWA-RHLGATVIGTVSTEEK 182 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHH-HHTTCEEEEEESSHHH
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHCCCEEEEEeCCHHH
Confidence 5789999995 99999999986 7899999999998643
No 465
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.42 E-value=0.26 Score=47.15 Aligned_cols=38 Identities=24% Similarity=0.326 Sum_probs=32.7
Q ss_pred CCCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 164 ~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.|.+|.|+|.|.+|...+..+++..|.+|++.|++..+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r 200 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDK 200 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHH
Confidence 47899999999999999988644678999999988764
No 466
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.33 E-value=0.15 Score=45.11 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=47.1
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccc-cCCHHHHhcccCEEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKR-ASSMDEVLREADVIS 241 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~l~ell~~aDiV~ 241 (394)
++|.|+| .|.||+.+++.| ...|.+|++.+|+...... + .+.... .... ..++.++++.+|+|+
T Consensus 1 M~ilItGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~---------~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi 68 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSL-STTDYQIYAGARKVEQVPQ---------Y--NNVKAVHFDVDWTPEEMAKQLHGMDAII 68 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHH-TTSSCEEEEEESSGGGSCC---------C--TTEEEEECCTTSCHHHHHTTTTTCSEEE
T ss_pred CeEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCccchhh---------c--CCceEEEecccCCHHHHHHHHcCCCEEE
Confidence 3789998 899999999998 5779999999998754210 0 000000 0111 124556788899999
Q ss_pred EcCCCCh
Q 016162 242 LHPVLDK 248 (394)
Q Consensus 242 l~lPlt~ 248 (394)
.+.....
T Consensus 69 ~~ag~~~ 75 (219)
T 3dqp_A 69 NVSGSGG 75 (219)
T ss_dssp ECCCCTT
T ss_pred ECCcCCC
Confidence 8876543
No 467
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.32 E-value=0.097 Score=50.64 Aligned_cols=95 Identities=13% Similarity=0.121 Sum_probs=57.4
Q ss_pred cCCCeEEEEecChHHHHH-HHHHH-hcCCcE-EEEEcCchh---hHHHHHHHhhhhhhhhcCCCCccccccCCHHH---H
Q 016162 163 LKGQTVGVIGAGRIGSAY-ARMMV-EGFKMN-LIYYDLYQA---TRLEKFVTAYGQFLKANGEQPVTWKRASSMDE---V 233 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~v-A~~la-~~~G~~-V~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e---l 233 (394)
..+.+|.|+|.|.||... ++. + +.+|++ |++.+++.. +. + +.+. .|.... .....++.+ +
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iql-a~k~~Ga~~Vi~~~~~~~~~~~~-~-~~~~-------lGa~~v-~~~~~~~~~i~~~ 239 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAML-KVDDKGYENLYCLGRRDRPDPTI-D-IIEE-------LDATYV-DSRQTPVEDVPDV 239 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHH-HHCTTCCCEEEEEECCCSSCHHH-H-HHHH-------TTCEEE-ETTTSCGGGHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHHHcCCcEEEEEeCCcccHHHH-H-HHHH-------cCCccc-CCCccCHHHHHHh
Confidence 345899999999999999 887 6 789997 999998765 32 1 1122 222111 111122222 2
Q ss_pred hcccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 234 l~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
-...|+|+-++.. +.+ -...+..++++..++.++.
T Consensus 240 ~gg~Dvvid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 240 YEQMDFIYEATGF-PKH----AIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp SCCEEEEEECSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCCC-hHH----HHHHHHHHhcCCEEEEEeC
Confidence 0146888877752 222 1345666777877877753
No 468
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.30 E-value=0.14 Score=51.61 Aligned_cols=108 Identities=13% Similarity=0.149 Sum_probs=63.4
Q ss_pred CCeEEEEecChHHHHHHHHHHh---------cCCcEEE-EEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh
Q 016162 165 GQTVGVIGAGRIGSAYARMMVE---------GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~---------~~G~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (394)
-.+|||||+|.||+.+++.+.+ +.+.+|. ++|++.... ..+. .+ ...+.++++++
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~-~~~~---------~~-----~~~~~d~~ell 74 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA-EALA---------GG-----LPLTTNPFDVV 74 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH-HHHH---------TT-----CCEESCTHHHH
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh-hhhc---------cc-----CcccCCHHHHh
Confidence 3589999999999999876531 2566655 567765432 1110 01 11246889998
Q ss_pred c--ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCc
Q 016162 235 R--EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPM 291 (394)
Q Consensus 235 ~--~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~l 291 (394)
. +.|+|+.|+|.......+ ....++.|.-++..--+-. -+-+.|.++.++..+
T Consensus 75 ~d~diDvVve~tp~~~~h~~~----~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv 130 (444)
T 3mtj_A 75 DDPEIDIVVELIGGLEPAREL----VMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGV 130 (444)
T ss_dssp TCTTCCEEEECCCSSTTHHHH----HHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCEEEEcCCCchHHHHH----HHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCC
Confidence 6 579999999952221222 1344556666664422211 223677777766544
No 469
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.29 E-value=0.2 Score=50.51 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=31.5
Q ss_pred ccccCCCeEEEEecChHHHHHHHHHHhcCCcEEE-EEcC
Q 016162 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDL 197 (394)
Q Consensus 160 g~~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~-~~d~ 197 (394)
|.+++|+||.|-|+|++|+..|+.| ...|++|+ +.|.
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L-~e~GakvVavsD~ 271 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKL-IEKGAIVLTMSDS 271 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHH-HHHTCCBCCEECS
T ss_pred CCCccCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECC
Confidence 3579999999999999999999997 68899986 4553
No 470
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.27 E-value=0.2 Score=46.56 Aligned_cols=75 Identities=9% Similarity=0.069 Sum_probs=46.7
Q ss_pred CCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCch-------hhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHh
Q 016162 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ-------ATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVL 234 (394)
Q Consensus 165 gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell 234 (394)
+++|.|+|. |.||+.+++.| ...|.+|++.+|.. .. ... ... +...+.... ......++.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~~~~-~~~-~~~----l~~~~v~~v~~D~~d~~~l~~~~ 74 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWAS-IKAGNPTYALVRKTITAANPETK-EEL-IDN----YQSLGVILLEGDINDHETLVKAI 74 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHH-HHHTCCEEEEECCSCCSSCHHHH-HHH-HHH----HHHTTCEEEECCTTCHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHH-HhCCCcEEEEECCCcccCChHHH-HHH-HHH----HHhCCCEEEEeCCCCHHHHHHHH
Confidence 578999996 99999999998 46688999998875 21 111 000 111121111 011123466778
Q ss_pred cccCEEEEcCCC
Q 016162 235 READVISLHPVL 246 (394)
Q Consensus 235 ~~aDiV~l~lPl 246 (394)
+.+|+|+.+.+.
T Consensus 75 ~~~d~vi~~a~~ 86 (307)
T 2gas_A 75 KQVDIVICAAGR 86 (307)
T ss_dssp TTCSEEEECSSS
T ss_pred hCCCEEEECCcc
Confidence 889999888764
No 471
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.23 E-value=0.14 Score=49.39 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=57.3
Q ss_pred CeEEEEec-ChHHHHHHHHHHhcCCc-EEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----ccC
Q 016162 166 QTVGVIGA-GRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (394)
Q Consensus 166 ktvGIIGl-G~IG~~vA~~la~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~aD 238 (394)
+++.|.|. |.||..+++.+ +..|+ +|++.+++.... +...+. .|..........+..+.+. ..|
T Consensus 162 ~~vlI~GasggiG~~~~~~a-~~~Ga~~Vi~~~~~~~~~-~~~~~~-------~g~~~~~d~~~~~~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIG-HFLGCSRVVGICGTHEKC-ILLTSE-------LGFDAAINYKKDNVAEQLRESCPAGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHH-HHTTCSEEEEEESCHHHH-HHHHHT-------SCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred cEEEEECCCcHHHHHHHHHH-HHCCCCeEEEEeCCHHHH-HHHHHH-------cCCceEEecCchHHHHHHHHhcCCCCC
Confidence 89999998 99999999986 78999 999999876442 111111 1221110011123333332 378
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
+|+.+.. ..+ -...+..++++..++.++.
T Consensus 233 ~vi~~~G--~~~----~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 233 VYFDNVG--GNI----SDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EEEESCC--HHH----HHHHHHTEEEEEEEEECCC
T ss_pred EEEECCC--HHH----HHHHHHHhccCcEEEEECC
Confidence 8887775 111 2456677788888887754
No 472
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.21 E-value=0.13 Score=47.33 Aligned_cols=70 Identities=14% Similarity=0.120 Sum_probs=46.7
Q ss_pred CCeEEEEecChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 165 gktvGIIGlG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.++|.|.|.|.||+.+++.| ..-|.+|++.+|+....... ...+..... ....+++ +..+|+|+.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~-~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRAL-APQGWRIIGTSRNPDQMEAI---------RASGAEPLL-WPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHH-GGGTCEEEEEESCGGGHHHH---------HHTTEEEEE-SSSSCCC--CTTCCEEEECC
T ss_pred cCcEEEECCcHHHHHHHHHH-HHCCCEEEEEEcChhhhhhH---------hhCCCeEEE-ecccccc--cCCCCEEEECC
Confidence 37899999999999999998 57799999999987542111 111110000 1123343 78899998887
Q ss_pred CCC
Q 016162 245 VLD 247 (394)
Q Consensus 245 Plt 247 (394)
...
T Consensus 72 ~~~ 74 (286)
T 3ius_A 72 APD 74 (286)
T ss_dssp CCB
T ss_pred Ccc
Confidence 643
No 473
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.19 E-value=0.19 Score=48.61 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=32.8
Q ss_pred CCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 164 ~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.|+++.|+|. |.||..+++.+ +..|++|++.+++...
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a-~~~Ga~Vi~~~~~~~~ 207 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIA-RAYGLKILGTAGTEEG 207 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHH
T ss_pred CcCEEEEECCCChHHHHHHHHH-HHCCCEEEEEeCChhH
Confidence 4889999998 99999999986 7899999999987654
No 474
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=93.12 E-value=0.093 Score=48.71 Aligned_cols=41 Identities=22% Similarity=0.085 Sum_probs=33.4
Q ss_pred ccccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 160 GNLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 160 g~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
...+.||++.|.|. |.||+++|+.| ...|++|++.++....
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~l-a~~G~~V~~~~~~~~~ 64 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALEL-AAAGAKVAVNYASSAG 64 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHH-HHTTCEEEEEESSCHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCChH
Confidence 35789999999975 78999999998 5789999998875443
No 475
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.09 E-value=0.12 Score=50.05 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=62.4
Q ss_pred CeEEEEecChHHHHHHHHHHhc-----C--CcEEE-EEcCchhhHHH-----HHHHhhhhhhhhcCCCCccccccC---C
Q 016162 166 QTVGVIGAGRIGSAYARMMVEG-----F--KMNLI-YYDLYQATRLE-----KFVTAYGQFLKANGEQPVTWKRAS---S 229 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~-----~--G~~V~-~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~ 229 (394)
.+|||||+|.||+.+++.+.+. . +++|. ++|++.....+ .+.+.+ .. + ... .... +
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~----~~-~--~~~-~~~~~~~d 78 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYK----EK-G--SLD-SLEYESIS 78 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHH----HT-T--CGG-GCCSEECC
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhh----cc-C--Ccc-cccCCCCC
Confidence 4799999999999999887431 1 45654 56766532111 011100 00 0 000 0123 7
Q ss_pred HHHHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCC
Q 016162 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNP 290 (394)
Q Consensus 230 l~ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~-vde~aL~~aL~~g~ 290 (394)
+++++ .+.|+|+.|+|.. .|.+.--+-....++.|.-+|...-..+ .+-+.|.++.++..
T Consensus 79 ~~~ll~~~iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~g 140 (331)
T 3c8m_A 79 ASEALARDFDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNN 140 (331)
T ss_dssp HHHHHHSSCSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcC
Confidence 88887 4589999999964 1111111223344566776766433222 23456676665544
No 476
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.02 E-value=0.24 Score=46.43 Aligned_cols=74 Identities=12% Similarity=0.195 Sum_probs=46.2
Q ss_pred CeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCcc--ccccCCHHHHhcccCEEEE
Q 016162 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT--WKRASSMDEVLREADVISL 242 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ell~~aDiV~l 242 (394)
++|.|+| .|.||+.+++.| ..-|.+|++.+|......... .. +...+..... .....++.++++.+|+|+.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L-~~~g~~V~~l~R~~~~~~~~~-~~----l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGS-LKLGHPTYVFTRPNSSKTTLL-DE----FQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHH-HHTTCCEEEEECTTCSCHHHH-HH----HHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHH-HHCCCcEEEEECCCCchhhHH-HH----hhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 5899999 599999999998 567899999998764211100 00 0111211110 1112346677889999988
Q ss_pred cCC
Q 016162 243 HPV 245 (394)
Q Consensus 243 ~lP 245 (394)
+.+
T Consensus 86 ~a~ 88 (318)
T 2r6j_A 86 ALA 88 (318)
T ss_dssp CCC
T ss_pred CCc
Confidence 876
No 477
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.96 E-value=0.61 Score=47.45 Aligned_cols=114 Identities=19% Similarity=0.232 Sum_probs=69.9
Q ss_pred ccCCCeEEEEecChHHHHHHHHHHhcCCcEEEEE--------cCchh--hHHHHHHHhhhhhhhhcCCCCccccccCCHH
Q 016162 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYY--------DLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (394)
Q Consensus 162 ~l~gktvGIIGlG~IG~~vA~~la~~~G~~V~~~--------d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (394)
++.|+||.|-|+|++|+..|+.| ...|++|++. |+..- ..+.+..+..+.. .+.... ....+
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L-~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i---~~~~~a--~~~~~-- 312 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYL-HRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTI---LGFPKA--KIYEG-- 312 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSS---TTCTTS--EEECS--
T ss_pred CcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCe---ecccCc--eeecc--
Confidence 58999999999999999999997 6899999873 33211 1222222211100 000000 11111
Q ss_pred HHh-cccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016162 232 EVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (394)
Q Consensus 232 ell-~~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~l 291 (394)
+++ ..||+.+=|.- .+.|+.+....++ -.+++..|.+.+ ..+| .+.|.+..+
T Consensus 313 ~il~~~~DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGI 365 (501)
T 3mw9_A 313 SILEVDCDILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNI 365 (501)
T ss_dssp CGGGSCCSEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred ccccccceEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCC
Confidence 333 57999987754 5778888777775 568888888874 5554 345655443
No 478
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=92.94 E-value=0.53 Score=47.75 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=27.7
Q ss_pred CeEEEEecChHHHHHHHHHHhcCCc---EEEEEcCch
Q 016162 166 QTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQ 199 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~~~G~---~V~~~d~~~ 199 (394)
++|.|||+|.||+.+|+.+++..++ .|++.|+..
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~ 50 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG 50 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch
Confidence 4699999999999999998776666 577777653
No 479
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.92 E-value=0.35 Score=46.87 Aligned_cols=92 Identities=13% Similarity=0.180 Sum_probs=58.3
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhc-CCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----c
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~-~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (394)
.|.+|.|+| .|.||...++.+ +. .|++|++.+++..+. + + +++.|.... .....++.+.+. .
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qla-k~~~g~~Vi~~~~~~~~~-~-~-------~~~lGad~v-i~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIA-RQRTDLTVIATASRPETQ-E-W-------VKSLGAHHV-IDHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHH-HHHCCSEEEEECSSHHHH-H-H-------HHHTTCSEE-ECTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHhcCCEEEEEeCCHHHH-H-H-------HHHcCCCEE-EeCCCCHHHHHHHhcCCC
Confidence 688999999 999999999985 76 599999999976542 1 1 122232211 111123433332 4
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~ 271 (394)
.|+|+-|+.. +.+ + ...++.++++..++.+
T Consensus 240 ~Dvvid~~g~-~~~---~-~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTHT-DKH---A-AEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSCH-HHH---H-HHHHHHSCTTCEEEEC
T ss_pred ceEEEECCCc-hhh---H-HHHHHHhcCCCEEEEE
Confidence 7888877651 111 1 4556778888888876
No 480
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=92.88 E-value=0.15 Score=47.50 Aligned_cols=40 Identities=23% Similarity=0.226 Sum_probs=31.0
Q ss_pred cccccCCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCch
Q 016162 159 VGNLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ 199 (394)
Q Consensus 159 ~g~~l~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~ 199 (394)
...++.||++.|.| -|.||+.+|+.| ...|++|++.+|+.
T Consensus 17 ~~~~l~~k~~lVTGas~gIG~aia~~L-~~~G~~V~~~~r~~ 57 (288)
T 2x9g_A 17 RGSHMEAPAAVVTGAAKRIGRAIAVKL-HQTGYRVVIHYHNS 57 (288)
T ss_dssp -----CCCEEEETTCSSHHHHHHHHHH-HHHTCEEEEEESSC
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHH-HHCCCeEEEEeCCc
Confidence 34568999998886 579999999998 46799999999886
No 481
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.87 E-value=0.22 Score=48.56 Aligned_cols=38 Identities=26% Similarity=0.409 Sum_probs=31.8
Q ss_pred cccCCCeEEEEecChHHHHHHHHHHhcCCc-EEEEEcCch
Q 016162 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ 199 (394)
Q Consensus 161 ~~l~gktvGIIGlG~IG~~vA~~la~~~G~-~V~~~d~~~ 199 (394)
..|++++|.|||.|.+|..+|+.|+ ..|. ++..+|+..
T Consensus 114 ~~L~~~~VlvvG~GglGs~va~~La-~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 114 DKLKNAKVVILGCGGIGNHVSVILA-TSGIGEIILIDNDQ 152 (353)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-HHTCSEEEEEECCB
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-hCCCCeEEEECCCc
Confidence 4688999999999999999999985 5565 788888753
No 482
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.86 E-value=0.29 Score=46.97 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=58.6
Q ss_pred CCCeEEEEecC-hHHHHHHHHHHhcC-CcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCC----HHHHh--c
Q 016162 164 KGQTVGVIGAG-RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS----MDEVL--R 235 (394)
Q Consensus 164 ~gktvGIIGlG-~IG~~vA~~la~~~-G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~ell--~ 235 (394)
.|+++.|+|.| .||..+++.+ +.. |++|++.+++...... .+.+ |..........+ +.++. .
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a-~~~~Ga~Vi~~~~~~~~~~~--~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIA-KAVSGATIIGVDVREEAVEA--AKRA-------GADYVINASMQDPLAEIRRITESK 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHHTCCEEEEEESSHHHHHH--HHHH-------TCSEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCccHHHHHHHHH-HHcCCCeEEEEcCCHHHHHH--HHHh-------CCCEEecCCCccHHHHHHHHhcCC
Confidence 57899999999 9999999986 677 9999999987654211 1111 211110001112 23333 2
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
..|+|+.+... +.+. ...+..++++..++.++.
T Consensus 240 ~~d~vi~~~g~-~~~~----~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 240 GVDAVIDLNNS-EKTL----SVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CEEEEEESCCC-HHHH----TTGGGGEEEEEEEEECCS
T ss_pred CceEEEECCCC-HHHH----HHHHHHHhcCCEEEEECC
Confidence 57888888752 2111 334566788888888764
No 483
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.84 E-value=0.071 Score=47.95 Aligned_cols=75 Identities=12% Similarity=0.121 Sum_probs=49.6
Q ss_pred cCCCeEEEEe-cChHHHHHHHHHHhcCCc--EEEEEcCchhhHHHHHHHhhhhhhhhcCCC--CccccccCCHHHHhccc
Q 016162 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLREA 237 (394)
Q Consensus 163 l~gktvGIIG-lG~IG~~vA~~la~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ell~~a 237 (394)
+.++++.|.| .|.||+.+++.| ...|. +|++.+|+....... ...+.. ........+++++++..
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L-~~~G~~~~V~~~~r~~~~~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~ 85 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEI-LEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYASAFQGH 85 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHH-HHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGGGGGSSC
T ss_pred hcCCeEEEECCCcHHHHHHHHHH-HcCCCCCEEEEEEcCCCCcccc---------ccCCceEEecCcCCHHHHHHHhcCC
Confidence 5688999999 699999999998 46788 999999876431100 000000 00111223566778889
Q ss_pred CEEEEcCCCC
Q 016162 238 DVISLHPVLD 247 (394)
Q Consensus 238 DiV~l~lPlt 247 (394)
|+|+.+....
T Consensus 86 d~vi~~ag~~ 95 (242)
T 2bka_A 86 DVGFCCLGTT 95 (242)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCcc
Confidence 9999988654
No 484
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=92.83 E-value=0.62 Score=45.43 Aligned_cols=107 Identities=14% Similarity=0.182 Sum_probs=63.6
Q ss_pred cccCCCeEEEEecC-hHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhc--C-CCCccccccCCHHHHhcc
Q 016162 161 NLLKGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN--G-EQPVTWKRASSMDEVLRE 236 (394)
Q Consensus 161 ~~l~gktvGIIGlG-~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~ell~~ 236 (394)
..+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+...+ .++.. + ..+..+....+++|.++.
T Consensus 184 ~~l~glkva~vGD~~nva~Sl~~~l-~~lG~~v~~~~P~~~~~~~~i~~----~~~~~a~~~~~g~~~~~~~d~~eav~~ 258 (353)
T 3sds_A 184 LGLEGLKIAWVGDANNVLFDLAIAA-TKMGVNVAVATPRGYEIPSHIVE----LIQKAREGVQSPGNLTQTTVPEVAVKD 258 (353)
T ss_dssp CSCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHH----HHHHHHTTCSSCCCEEEESCHHHHTTT
T ss_pred cccCCCEEEEECCCchHHHHHHHHH-HHcCCEEEEECCcccCCCHHHHH----HHHHhhhhccCCCeEEEECCHHHHhcC
Confidence 45899999999965 4666666665 57999999998753211111111 01110 0 111223345799999999
Q ss_pred cCEEEEcC--CCChh----------hhhcccHHHHhc--CCCCcEEEEcC
Q 016162 237 ADVISLHP--VLDKT----------TYHLINKERLAT--MKKEAILVNCS 272 (394)
Q Consensus 237 aDiV~l~l--Plt~~----------t~~li~~~~l~~--mk~gailIN~a 272 (394)
+|+|..-. +...+ ...-++.+.++. +|++++|.-|.
T Consensus 259 aDVvytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 259 ADVIVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CSEEEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred CCEEEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 99997632 21111 013467777777 77787777763
No 485
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.76 E-value=0.54 Score=44.80 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=59.6
Q ss_pred cCCCeEEEEecChHHHHHHHHHHhcCCcE-EEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHh------c
Q 016162 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------R 235 (394)
Q Consensus 163 l~gktvGIIGlG~IG~~vA~~la~~~G~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~ 235 (394)
..|++|.|+|.|.+|...++.+ +..|++ +++.|++..+. + + +++.|..........+..+.. .
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~a-k~~G~~~vi~~~~~~~k~-~-~-------a~~lGa~~~i~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCA-VALGAKSVTAIDISSEKL-A-L-------AKSFGAMQTFNSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHH-H-H-------HHHTTCSEEEETTTSCHHHHHHHHGGGC
T ss_pred CCCCEEEEECCCCcchHHHHHH-HHcCCcEEEEEechHHHH-H-H-------HHHcCCeEEEeCCCCCHHHHHHhhcccC
Confidence 3588999999999999999885 889985 56788776542 1 1 222333222111223444433 2
Q ss_pred ccCEEEEcCCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016162 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (394)
Q Consensus 236 ~aDiV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 273 (394)
..|+|+-++. .+.+. +..++.++++..++.++-
T Consensus 229 g~d~v~d~~G-~~~~~----~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 229 FNQLILETAG-VPQTV----ELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp SSEEEEECSC-SHHHH----HHHHHHCCTTCEEEECCC
T ss_pred Cccccccccc-ccchh----hhhhheecCCeEEEEEec
Confidence 3677777765 23322 445677888888887763
No 486
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.74 E-value=0.17 Score=48.14 Aligned_cols=111 Identities=15% Similarity=0.221 Sum_probs=60.5
Q ss_pred CeEEEEecChHHHHHHHHHHh-cCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEEEEcC
Q 016162 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (394)
Q Consensus 166 ktvGIIGlG~IG~~vA~~la~-~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~l 244 (394)
.||+|||.|.||+.+|-.|+. ++--++..||.......-...+ ..+.....+... ......+. +.++.||+|+++.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~D-L~h~~~~~~~~~-~i~~~~d~-~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMD-LAHAAAGIDKYP-KIVGGADY-SLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHH-HHHHHGGGTCCC-EEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhh-hhcccccCCCCC-eEecCCCH-HHhCCCCEEEEec
Confidence 479999999999999977632 4445899999876432211111 100000011111 11112233 4689999999885
Q ss_pred --CCChh-hh-hcc--cH-------HHHhcCCCCcEEEEcCCCcccCHHH
Q 016162 245 --VLDKT-TY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVA 281 (394)
Q Consensus 245 --Plt~~-t~-~li--~~-------~~l~~mk~gailIN~aRG~~vde~a 281 (394)
|..|. |+ .++ |. +.+..-.|+++++.++. ++|.-.
T Consensus 78 G~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN--Pvd~~t 125 (294)
T 2x0j_A 78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN--PMDVMT 125 (294)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS--SHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC--cchhhH
Confidence 44442 22 122 22 23344467888888754 444433
No 487
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.72 E-value=0.66 Score=44.98 Aligned_cols=94 Identities=14% Similarity=0.035 Sum_probs=57.8
Q ss_pred cCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhc-----c
Q 016162 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (394)
Q Consensus 163 l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (394)
-.|.+|.|+|. |.+|...++.+ +.+|++|++.. +..+ .+ +.+ ..|..........++.+.+. .
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla-~~~Ga~Vi~~~-~~~~-~~-~~~-------~lGa~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQML-RLSGYIPIATC-SPHN-FD-LAK-------SRGAEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEE-CGGG-HH-HHH-------HTTCSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHH-HHCCCEEEEEe-CHHH-HH-HHH-------HcCCcEEEECCCchHHHHHHHHccCC
Confidence 46899999999 89999999985 89999998875 3322 22 222 22322111111234433332 3
Q ss_pred cCEEEEcCCCChhhhhcccHHHHhcC-CCCcEEEEcC
Q 016162 237 ADVISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (394)
Q Consensus 237 aDiV~l~lPlt~~t~~li~~~~l~~m-k~gailIN~a 272 (394)
.|+|+-|+.. +.+. ...+..+ +++..++.++
T Consensus 232 ~d~v~d~~g~-~~~~----~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCITN-VEST----TFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSCS-HHHH----HHHHHHSCTTCEEEEESS
T ss_pred ccEEEECCCc-hHHH----HHHHHHhhcCCCEEEEEe
Confidence 7999888762 2221 3445667 5788888875
No 488
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.72 E-value=0.091 Score=50.85 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=59.7
Q ss_pred CCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhc-CCCCc--c-ccccCCHHHHhcccC
Q 016162 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN-GEQPV--T-WKRASSMDEVLREAD 238 (394)
Q Consensus 164 ~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-~~~~~~l~ell~~aD 238 (394)
.+++|.|.| .|.||+.+++.| ..-|.+|++.+|+........ +... +.... . .....++.++++.+|
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~~~-------l~~~~~v~~v~~D~l~d~~~l~~~~~~~d 75 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVA-AAVGHHVRAQVHSLKGLIAEE-------LQAIPNVTLFQGPLLNNVPLMDTLFEGAH 75 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHH-HHTTCCEEEEESCSCSHHHHH-------HHTSTTEEEEESCCTTCHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HhCCCEEEEEECCCChhhHHH-------HhhcCCcEEEECCccCCHHHHHHHHhcCC
Confidence 367899999 599999999998 467899999988765421110 1100 10000 0 111124667789999
Q ss_pred EEEEcCCCChhhhhcccHHHHhcCCC-C--cEEEEcCCCc
Q 016162 239 VISLHPVLDKTTYHLINKERLATMKK-E--AILVNCSRGP 275 (394)
Q Consensus 239 iV~l~lPlt~~t~~li~~~~l~~mk~-g--ailIN~aRG~ 275 (394)
+|+.+...............+..+++ | ..||.+|...
T Consensus 76 ~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 76 LAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp EEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 99977654311111222333433322 3 4788887653
No 489
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=92.66 E-value=0.23 Score=46.20 Aligned_cols=76 Identities=20% Similarity=0.233 Sum_probs=46.7
Q ss_pred CCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh----HHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhccc
Q 016162 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT----RLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (394)
Q Consensus 165 gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~a 237 (394)
.++|.|+|. |.||+.+++.| ...|.+|++.+|.... ........ +...+.... ......++.++++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L-~~~g~~V~~l~R~~~~~~~~~~~~~~~~----l~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKAS-LDLGHPTFLLVRESTASSNSEKAQLLES----FKASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHH-HHTTCCEEEECCCCCTTTTHHHHHHHHH----HHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHH-HhCCCCEEEEECCcccccCHHHHHHHHH----HHhCCCEEEEeccCCHHHHHHHHcCC
Confidence 468999996 99999999998 5678999999987421 11110000 111121111 011123466778889
Q ss_pred CEEEEcCC
Q 016162 238 DVISLHPV 245 (394)
Q Consensus 238 DiV~l~lP 245 (394)
|+|+.+.+
T Consensus 79 d~vi~~a~ 86 (308)
T 1qyc_A 79 DVVISTVG 86 (308)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99988876
No 490
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.66 E-value=0.24 Score=46.14 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=33.4
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
..+.||++.|.|. |.||+.+|+.| ...|++|++.+++...
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~l-a~~G~~V~~~~~~~~~ 65 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARAL-AASGFDIAITGIGDAE 65 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEESCCHH
T ss_pred hccCCCEEEEecCCCHHHHHHHHHH-HHCCCeEEEEeCCCHH
Confidence 5689999999975 78999999998 5789999999864433
No 491
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=92.66 E-value=0.069 Score=49.60 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=28.2
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCch
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~ 199 (394)
..+.||++.|.|. |.||+++|+.|+ ..|++|++.+++.
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~ 61 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLA-SDGFTVVINYAGK 61 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHH-HHTCEEEEEESSC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence 3578999999975 789999999984 6799998875443
No 492
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=92.65 E-value=0.22 Score=46.31 Aligned_cols=40 Identities=20% Similarity=0.157 Sum_probs=33.4
Q ss_pred cccCCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 161 ~~l~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
..+.||++.|.| -|.||+.+|+.| ...|++|++.+++...
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l-~~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMEL-GRRGCKVIVNYANSTE 65 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHH-HHTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCchH
Confidence 457899998886 678999999998 4779999999887643
No 493
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=92.63 E-value=0.25 Score=48.46 Aligned_cols=91 Identities=22% Similarity=0.295 Sum_probs=49.6
Q ss_pred CeEEEEe-cChHHHHHHH-HHHhcCC---cEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCccccccCCHHHHhcccCEE
Q 016162 166 QTVGVIG-AGRIGSAYAR-MMVEGFK---MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (394)
Q Consensus 166 ktvGIIG-lG~IG~~vA~-~la~~~G---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (394)
++|||+| +|.+|+.+.+ .+ ...+ ..++.+....... . ....+.....+....+.++ +..+|+|
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll-~~~~~~~v~i~~~~~~s~G~------~----v~~~~g~~i~~~~~~~~~~-~~~~DvV 69 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMV-EERDFDAIRPVFFSTSQLGQ------A----APSFGGTTGTLQDAFDLEA-LKALDII 69 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHH-HTTGGGGSEEEEEESSSTTS------B----CCGGGTCCCBCEETTCHHH-HHTCSEE
T ss_pred cEEEEECCCCHHHHHHHHHHH-hcCCCCeEEEEEEEeCCCCC------C----ccccCCCceEEEecCChHH-hcCCCEE
Confidence 4899999 9999999999 54 4433 3555443321110 0 0000011222222334555 5789999
Q ss_pred EEcCCCChhhhhcccHHHHhcCCCCc--EEEEcCC
Q 016162 241 SLHPVLDKTTYHLINKERLATMKKEA--ILVNCSR 273 (394)
Q Consensus 241 ~l~lPlt~~t~~li~~~~l~~mk~ga--ilIN~aR 273 (394)
+.|+|... +..+. ...+ +.|+ ++|+.+.
T Consensus 70 f~a~g~~~-s~~~a-~~~~---~~G~k~vVID~ss 99 (367)
T 1t4b_A 70 VTCQGGDY-TNEIY-PKLR---ESGWQGYWIDAAS 99 (367)
T ss_dssp EECSCHHH-HHHHH-HHHH---HTTCCCEEEECSS
T ss_pred EECCCchh-HHHHH-HHHH---HCCCCEEEEcCCh
Confidence 99998322 22221 2222 4565 8999764
No 494
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=92.60 E-value=0.075 Score=50.46 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=34.2
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchh
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~ 200 (394)
.++.|++|.|.|. |.||+.+++.| ...|.+|++.+|...
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L-~~~g~~V~~~~r~~~ 55 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHW-LPQGHEILVIDNFAT 55 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHH-GGGTCEEEEEECCSS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCCc
Confidence 5789999999987 99999999998 577999999998643
No 495
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=92.58 E-value=0.35 Score=44.73 Aligned_cols=31 Identities=32% Similarity=0.592 Sum_probs=23.8
Q ss_pred eEEEEec-ChHHHHHHHHHHhcCCcEEEE-EcC
Q 016162 167 TVGVIGA-GRIGSAYARMMVEGFKMNLIY-YDL 197 (394)
Q Consensus 167 tvGIIGl-G~IG~~vA~~la~~~G~~V~~-~d~ 197 (394)
+|+|+|. |+||+.+++.+...-++++.+ +|+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 7999995 999999999863334888764 443
No 496
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.57 E-value=0.08 Score=50.34 Aligned_cols=70 Identities=14% Similarity=0.222 Sum_probs=45.3
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhhHHHHHHHhhhhhhhhcCCCCc--cccccCCHHHHhccc
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~a 237 (394)
....+++|.|.|. |.||+.+++.| ...|.+|++.+|..... +.... ......++.+++..+
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L-~~~G~~V~~~~r~~~~~---------------~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAAL-RTQGRTVRGFDLRPSGT---------------GGEEVVGSLEDGQALSDAIMGV 78 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHH-HHTTCCEEEEESSCCSS---------------CCSEEESCTTCHHHHHHHHTTC
T ss_pred cccCCCEEEEECCCChHHHHHHHHH-HhCCCEEEEEeCCCCCC---------------CccEEecCcCCHHHHHHHHhCC
Confidence 5788999999997 99999999998 57799999999875420 00000 011123466788999
Q ss_pred CEEEEcCCC
Q 016162 238 DVISLHPVL 246 (394)
Q Consensus 238 DiV~l~lPl 246 (394)
|+|+.+...
T Consensus 79 d~vih~A~~ 87 (347)
T 4id9_A 79 SAVLHLGAF 87 (347)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999877653
No 497
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.57 E-value=0.1 Score=47.98 Aligned_cols=40 Identities=35% Similarity=0.345 Sum_probs=34.9
Q ss_pred cccCCCeEEEEec-C-hHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 161 NLLKGQTVGVIGA-G-RIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 161 ~~l~gktvGIIGl-G-~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
..+.||++.|.|. | .||+.+|+.| ...|++|++.+++...
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l-~~~G~~V~~~~r~~~~ 59 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRA-LLEGADVVISDYHERR 59 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHH-HHTTCEEEEEESCHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHH-HHCCCEEEEecCCHHH
Confidence 4689999999998 8 5999999998 5779999999998754
No 498
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=92.55 E-value=0.099 Score=47.38 Aligned_cols=36 Identities=28% Similarity=0.237 Sum_probs=31.5
Q ss_pred ccCCCeEEEEe-cChHHHHHHHHHHhcCCcEEEEEcCc
Q 016162 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLY 198 (394)
Q Consensus 162 ~l~gktvGIIG-lG~IG~~vA~~la~~~G~~V~~~d~~ 198 (394)
++.||++.|.| .|.||+.+++.| ...|++|++.+|+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l-~~~G~~V~~~~r~ 40 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLF-ARAGAKVGLHGRK 40 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHH-HHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCChHHHHHHHHH-HHCCCEEEEECCC
Confidence 47889999986 489999999998 4779999999987
No 499
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.49 E-value=0.19 Score=46.76 Aligned_cols=40 Identities=28% Similarity=0.282 Sum_probs=34.4
Q ss_pred cccCCCeEEEEec-ChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 161 ~~l~gktvGIIGl-G~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.+|+||++.|-|- +.||+++|++|+ ..|++|+.+|++...
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la-~~Ga~Vv~~~~~~~~ 43 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELLEDR 43 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHH-HcCCEEEEEECCHHH
Confidence 3799999999976 569999999984 789999999998754
No 500
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=92.40 E-value=0.13 Score=47.46 Aligned_cols=39 Identities=23% Similarity=0.285 Sum_probs=34.0
Q ss_pred ccCCCeEEEEe---cChHHHHHHHHHHhcCCcEEEEEcCchhh
Q 016162 162 LLKGQTVGVIG---AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (394)
Q Consensus 162 ~l~gktvGIIG---lG~IG~~vA~~la~~~G~~V~~~d~~~~~ 201 (394)
.+.||++.|.| -|.||+++|+.| ...|++|++.+++...
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l-~~~G~~V~~~~r~~~~ 45 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVA-QEQGAQLVLTGFDRLR 45 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHH-HHTTCEEEEEECSCHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHH-HHCCCEEEEEecChHH
Confidence 47899999999 599999999998 5779999999987654
Done!