BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016163
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/318 (49%), Positives = 213/318 (66%), Gaps = 32/318 (10%)
Query: 6 QQPHNSTFLLDALYCSEENWEDELRVDCFQVQDGGLIEEEEEEEEGESFYFINKTKTIPV 65
++ +++FLLDALYC EE W+DE G +EE N + +
Sbjct: 10 REEQSNSFLLDALYCEEEKWDDE----------GEEVEE-------------NSSLSSSS 46
Query: 66 PVPMLHEQDLSWQDDELSTLLSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFT 125
++ +QDL W+D++L TL SKE L + + LS R EAV W+L+VNAHY F+
Sbjct: 47 SPFVVLQQDLFWEDEDLVTLFSKEEEQGLSCL--DDVYLSTDRKEAVGWILRVNAHYGFS 104
Query: 126 ALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKF 185
L A+LA+ YLD+F+ S+ LQRDKPWM QL +VACLSLAAKVEETQVPLLLD QVE+ K+
Sbjct: 105 TLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKY 164
Query: 186 VFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSAI 245
VFEAKTIQRME+L+LSTL+WKM+ +TP+SF+D+I RRLGLK W+FL +C R+LLS I
Sbjct: 165 VFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVI 224
Query: 246 SDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNILGTDKDKVEHCSKLIMQL-- 303
SDS F+ YLPSV+A ATM+ +++ ++ + Y+ LL +L K+KV+ C LI+QL
Sbjct: 225 SDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQLPV 284
Query: 304 ---AEQVQGQGSQSIKRK 318
Q+Q Q S+ KRK
Sbjct: 285 DRIGLQIQIQSSK--KRK 300
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 231/378 (61%), Gaps = 39/378 (10%)
Query: 1 MAAHQQQPHNSTF-LLDALYCSEENWEDELRVDCFQVQDGGLIEEEEEEEEGESFYFINK 59
+ ++ N F +LD LYC EE V+ DG L E+ +E F F+
Sbjct: 3 LEKEEEASQNGAFCVLDGLYCEEETG----FVEDDLDDDGDLDFLEKSDESVVKFQFL-- 56
Query: 60 TKTIPVPVPMLHEQDLSWQDDELSTLLSKE-VPNRLYNILKTNPSLSRARSEAVDWMLKV 118
P+L W DDE+ +L+SKE N + + L R EA+DW+L+V
Sbjct: 57 --------PLLDM--FLWDDDEILSLISKENETNPCFGEQILDGFLVSCRKEALDWVLRV 106
Query: 119 NAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDL 178
+HY FT+LTA+LAVNY DRF+ S +LQ DKPWM+QL AVA LSLAAKVEE QVPLLLDL
Sbjct: 107 KSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDL 166
Query: 179 QVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCD 238
QVE+ +++FEAKTIQRME+L+LSTLQW+M+PVTP+SF D+I RR G K + +F ++C+
Sbjct: 167 QVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKWHQQLDFCRKCE 226
Query: 239 RILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNILGTDKDKVEHCSK 298
R+L+S I+D+ FM+Y PSV+A A M+ V + ++ VEY+ Q+ +L +++KV C +
Sbjct: 227 RLLISVIADTRFMRYFPSVLATAIMILVFEELKPCDEVEYQSQITTLLKVNQEKVNECYE 286
Query: 299 LIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDVSFSSSDSSNDSWS-----VAS 353
L+++ + S KR + SP+GV+D DSSN SW+ S
Sbjct: 287 LLLE--------HNPSKKRMMNLVD----QDSPSGVLDFD----DSSNSSWNVSTTASVS 330
Query: 354 SVSSSPEPLSKKNRSQAQ 371
S SSSPEPL K+ R Q Q
Sbjct: 331 SSSSSPEPLLKRRRVQEQ 348
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 264 bits (675), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 210/346 (60%), Gaps = 26/346 (7%)
Query: 34 FQVQDGGLIEEEEE--------EEEGESFYFINKTKTIPVPVPMLHEQDLSWQDDELSTL 85
F V DG EEE E +E E F F+N L + D+ W DDELSTL
Sbjct: 14 FCVLDGLFCEEESEFHEQVDLCDESVEKFPFLNLG---------LSDHDMLWDDDELSTL 64
Query: 86 LSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQL 145
+SK+ P LY+ + + L R +A+DW+ KV +HY F +LTALLAVNY DRF+ S +
Sbjct: 65 ISKQEPC-LYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKF 123
Query: 146 QRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQW 205
Q DKPWM+QL A+ACLSLAAKVEE +VP LLD QVE+ ++VFEAKTIQRME+LVLSTL W
Sbjct: 124 QTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDW 183
Query: 206 KMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLH 265
+M+PVTP+SF D+I RR K + EFL RC+ +LLS I DS F+ + PSV+A A M+
Sbjct: 184 RMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVS 243
Query: 266 VVQNIESSLGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVP 325
V+++++ Y+ QL+ +L D +KV C +L++ S S KR + P
Sbjct: 244 VIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELVL--------DHSPSKKRMMNWMQQP 295
Query: 326 VVPGSPNGVMDVSFSSSDSSNDSWSVASSVSSSPEPLSKKNRSQAQ 371
P S SS++S S S + S S S EPL K+ R Q Q
Sbjct: 296 ASPIGVFDASFSSDSSNESWVVSASASVSSSPSSEPLLKRRRVQEQ 341
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 172/277 (62%), Gaps = 10/277 (3%)
Query: 67 VPMLHEQDLSWQDDELSTLLSKEV---PNRLY--NILKTNPSLSRARSEAVDWMLKVNAH 121
+PM+ S +D + +L +E+ P Y +L + LS R++A+DW+LKV AH
Sbjct: 52 IPMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLS-VRNQALDWILKVCAH 110
Query: 122 YSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVE 181
Y F L L++NYLDRFL S++L +DK W AQL AV+CLSLA+K+EET VP ++DLQVE
Sbjct: 111 YHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVE 170
Query: 182 DIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRIL 241
D KFVFEAKTI+RME+LV++TL W++ +TP SF+DY ++ G++ + R R +
Sbjct: 171 DPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKIS--GHVSENLIYRSSRFI 228
Query: 242 LSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNILGTDKDKVEHCSKLIM 301
L+ F+ + PS +A A + V + E+ ++ EK L +++ +++V+ C L+
Sbjct: 229 LNTTKAIEFLDFRPSEIAAAAAVSVSISGETEC-IDEEKALSSLIYVKQERVKRCLNLMR 287
Query: 302 QLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDVS 338
L + +G+ S+ ++ + V VP SP GV++ +
Sbjct: 288 SLTGEENVRGT-SLSQEQARVAVRAVPASPVGVLEAT 323
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/235 (41%), Positives = 140/235 (59%), Gaps = 6/235 (2%)
Query: 76 SWQDDELSTLLSKE---VPNRLY-NILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALL 131
SW D ++ + E VP Y + +T + AR ++V W+LKV A+Y+F LTA L
Sbjct: 46 SWPGDSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYL 105
Query: 132 AVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKT 191
AVNY+DRFL++ +L W QL AVACLSLAAK+EE VP L D QV +K++FEAKT
Sbjct: 106 AVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKT 165
Query: 192 IQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSAISDSSFM 251
I+RME+LVLS L W++ VTP F+ + A ++ G F+ I+LS I ++SF+
Sbjct: 166 IKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFL 225
Query: 252 QYLPSVMANATMLHVVQNIE--SSLGVEYEKQLLNILGTDKDKVEHCSKLIMQLA 304
+Y PS +A A +L V + SS+ +E G K+K+ C +L+ +A
Sbjct: 226 EYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMA 280
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 154/269 (57%), Gaps = 24/269 (8%)
Query: 106 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAA 165
R R +A+DW+ KV+++YSF LTA LAVNYLDRFL +QL K WM QL AVACLSLAA
Sbjct: 101 RVRMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAA 160
Query: 166 KVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGL 225
K+EET VP LDLQV + ++VFEAKTIQRME+LVLSTL+W+M VTP S++DY R L
Sbjct: 161 KMEETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNG 220
Query: 226 KGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNI 285
++L + + + PS +A A VV ++
Sbjct: 221 GDPPSGRSALLSSELILCIARGTECLGFRPSEIAAAVAAAVVGEEHAAFS---------- 270
Query: 286 LGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDVSFSSSDSS 345
+K+++ HC ++I Q E + + S S R F S ++P SP GV+D + S S
Sbjct: 271 -HVNKERMSHCQEVI-QAMELIHPKPS-SPSRVFVSSSIPR---SPTGVLDAAGCLSYRS 324
Query: 346 NDSWSVASSVSSS-------PEPLSKKNR 367
+DS +VAS ++S P+S K R
Sbjct: 325 DDS-AVASHYAASSWGYEHDSSPVSSKRR 352
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 125/202 (61%), Gaps = 7/202 (3%)
Query: 107 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFS--FQLQRDKPWMAQLAAVACLSLA 164
R A+DW+ KV A+YSF L A LAVNYLDRFL S F + D PWM QL VACLSLA
Sbjct: 103 CRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLA 162
Query: 165 AKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLG 224
AK+EET P LDLQV + ++VF+A+TI RMEI+VL+TL+W+M VTP +++ + ++
Sbjct: 163 AKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKIN 222
Query: 225 LKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSL--GVEYEKQL 282
+ E + RC I+LS + + F+++ PS +A A L VV + L G E
Sbjct: 223 EGNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSK 282
Query: 283 LNILGTDKDKVEHCSKLIMQLA 304
L + DKD V C + + ++A
Sbjct: 283 LPV---DKDNVGRCHQAMQEMA 301
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 159/299 (53%), Gaps = 22/299 (7%)
Query: 79 DDELSTLLSKE----VPNRLY-NILKTNPS---LSRARSEAVDWMLKVNAHYSFTALTAL 130
DD + LL +E +P Y L P L RS+A+DW+ KV+ Y F LTA+
Sbjct: 53 DDCIEALLGREEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTAV 112
Query: 131 LAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAK 190
L+VNYLDRFL F L +++ M QL AVA LSLAAK+EET VP LDLQV D K+VFE +
Sbjct: 113 LSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETR 172
Query: 191 TIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSAISDSSF 250
TI+RME+ VL+ L+W+M VT SF+DY + L R ++LS + F
Sbjct: 173 TIKRMELAVLNALKWRMQAVTACSFIDYYLHKFNDDDTPSTSALSRSVDLILSTCKVAEF 232
Query: 251 MQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNILGTDKDKVEHCSKLIMQ--LAEQVQ 308
+ + PS +A + L ++ E+S+ +E+ K++V C ++I + +
Sbjct: 233 LVFRPSEIAASVALVALEEHETSM---FERVATCYKNLKKERVLRCYEMIQDKIIMRNIM 289
Query: 309 GQGSQSIKRKFGSITVPVVPGSPNGVMDVSFSSSDSSNDSWSVASSVSSSPEPLSKKNR 367
Q + S+ F +P SP GV+D + S S D++ + + + SK+ R
Sbjct: 290 RQSAGSV---FS------IPKSPIGVLDAAACISQQSEDTFVGSPATNYESSASSKRRR 339
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 106 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAA 165
R RSEA+ W+ +V +Y+F+++TA LAVNYLDRFL ++L + WM QL +VACLS+AA
Sbjct: 108 RVRSEAIGWIWEVYTYYNFSSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAA 167
Query: 166 KVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGL 225
K+EET VP LDLQ+ + +F+FE +TI RME+LVL+ L W+M VTP S++DY R+L
Sbjct: 168 KMEETVVPQCLDLQIGEPRFLFEVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNS 227
Query: 226 KGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNI 285
+L R ++L + + F+++ PS +A A V + GV E
Sbjct: 228 GNAAPRSWLLRSSELILRIAAGTGFLEFRPSEIAAAVAATVAGE---ATGVVEEDIAEAF 284
Query: 286 LGTDKDKVEHCSKLI 300
DK +V C + I
Sbjct: 285 THVDKGRVLQCQEAI 299
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 141/246 (57%), Gaps = 24/246 (9%)
Query: 108 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKV 167
R +A+DW+ KV+++Y+F L+ LAVNYLDRFL SF L D+ WM QL +V+CLSLA K+
Sbjct: 95 RKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKM 154
Query: 168 EETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKG 227
EET VPL +DLQV D ++VFEA+ I+RME++V+ TL+W++ VTP SF+ Y +
Sbjct: 155 EETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGK 214
Query: 228 YLCWEFLKRCDRILLSAISDSSFMQYLPS-VMANATMLHVVQN----IESSLGVEYEKQL 282
+ C + + + DS F+ + PS + A + + +N S+LG E E
Sbjct: 215 PPSYTLASWCSDLTVGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALG-ESE--- 270
Query: 283 LNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDV---SF 339
+ +K+ V C +L+++ A +K+ S VP SP V+D SF
Sbjct: 271 ---IPVNKEMVMRCYELMVEKA---------LVKKIRNSNASSSVPHSPITVLDAACFSF 318
Query: 340 SSSDSS 345
S D++
Sbjct: 319 RSDDTT 324
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 135/238 (56%), Gaps = 15/238 (6%)
Query: 77 WQDDELSTLLSKEV----------PNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTA 126
W D ++ L+ E P RL + P+ AR+++V W+LKV Y
Sbjct: 78 WTVDVVAELIGGEAERSHSPRADYPGRLRS---GRPADLAARADSVAWILKVRELYGMLP 134
Query: 127 LTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKFV 186
+TA LAV+Y+DRFL +L + W QL AV CLSLAAK+EET VP +LDLQ+ED +++
Sbjct: 135 VTAYLAVSYMDRFLSLHRLPGNG-WAMQLLAVTCLSLAAKMEETLVPSILDLQMEDARYI 193
Query: 187 FEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSAIS 246
FE +TI RME+LVL L W++ +TP +F+ A ++ G E + + ++ L+ I
Sbjct: 194 FEHRTIFRMELLVLDALDWRLRSITPFTFMYLFADKVDPNGKHIRELIHQATQVTLATIH 253
Query: 247 DSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQL-LNILGTDKDKVEHCSKLIMQL 303
D+ F+ + PS +A A +L I + +++ + I+G D++ + C +L+ QL
Sbjct: 254 DTEFLDHCPSSIAAAAVLCASSEIMQLVSIDHGTLVSWRIIGLDEEAIIRCYRLMQQL 311
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 119/198 (60%), Gaps = 5/198 (2%)
Query: 109 SEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVE 168
SE+V W+LKV + + F TA LAV+Y+DRF+ S L D W +QL VACLSLAAK+E
Sbjct: 126 SESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLP-DHGWASQLLCVACLSLAAKME 184
Query: 169 ETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGY 228
E+ P LLDLQ+E +F+FE +TIQRME++VL L W++ VTP +F+D+ A ++G G
Sbjct: 185 ESSAPPLLDLQIEGTRFIFEPRTIQRMELIVLVELDWRLRSVTPFAFVDFFACKVGSSGR 244
Query: 229 LCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLN---- 284
R +I+LSAI + F+ + S MA A +L V +++ +
Sbjct: 245 SSRILALRACQIILSAIHELEFLNHCASSMAAAAVLFAVNESPAAMSHRSSVSSESAASW 304
Query: 285 ILGTDKDKVEHCSKLIMQ 302
+G ++++ C +L+ +
Sbjct: 305 CIGLTEERISSCYQLLQR 322
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 115/197 (58%), Gaps = 12/197 (6%)
Query: 107 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAK 166
AR+E+V W+LKV + F LTA LAVNY+DRFL L + W QL AVACLSLAAK
Sbjct: 81 ARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAK 140
Query: 167 VEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLK 226
+EET VP LLDLQVE ++VFE +TI RME L+L+ L W++ VTP +F+D+ A +
Sbjct: 141 MEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACK---- 196
Query: 227 GYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNIL 286
+ ++ +A SD F+ + PS MA A +L S V E + +
Sbjct: 197 --------HISNAMVQNANSDIQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCI 248
Query: 287 GTDKDKVEHCSKLIMQL 303
G ++ + C +L+ QL
Sbjct: 249 GLAEEGISSCYQLMQQL 265
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 142/255 (55%), Gaps = 38/255 (14%)
Query: 104 LSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSL 163
L+ R +A++W+ K + F L LA+NYLDRFL L K W+ QL AVACLSL
Sbjct: 74 LNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSL 133
Query: 164 AAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL 223
AAK+EET+VP+L+DLQV D +FVFEAK++QRME+LVL+ L+W++ +TP S++ Y R++
Sbjct: 134 AAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM 193
Query: 224 GLKGYLCWE-----FLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEY 278
C + + R +++ S F+++ PS +A A L V ++ V +
Sbjct: 194 S----KCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQR---VHF 246
Query: 279 EKQLLNILGT--DKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMD 336
+ + L + K++V+ ++ E ++ GS + +PNGV++
Sbjct: 247 DNSSFSPLFSLLQKERVK-------KIGEMIESDGSD------------LCSQTPNGVLE 287
Query: 337 V-----SFSSSDSSN 346
V SF + DSS+
Sbjct: 288 VSACCFSFKTHDSSS 302
>sp|Q0J3H7|CCD32_ORYSJ Cyclin-D3-2 OS=Oryza sativa subsp. japonica GN=CYCD3-2 PE=2 SV=1
Length = 364
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 137/240 (57%), Gaps = 20/240 (8%)
Query: 107 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQ-RDKPWMAQLAAVACLSLAA 165
AR AV W L+ A F+ALTA LAV YLDR L+ D+PWMA+LAAVAC++LAA
Sbjct: 77 AREAAVGWALRAVARLGFSALTAALAVAYLDRCFLGGALRLGDRPWMARLAAVACVALAA 136
Query: 166 KVEETQVPLLLDLQV-------EDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDY 218
KVEET+VP+LLDLQ+ + +VFE KT++RME+LVLS L W+M+PVTPLS+L
Sbjct: 137 KVEETRVPVLLDLQLCAAERADPNEAYVFEDKTVRRMELLVLSALGWRMHPVTPLSYLQ- 195
Query: 219 IARRLGLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEY 278
L G L CD LL+ + D + ++ PS A A +L G +
Sbjct: 196 -----PLLGTAHAARLHHCDTALLALMPDWRWPRHRPSAWAAAALLATAGWCGGGGGDDA 250
Query: 279 EKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSI---KRKFGSITVPVVPGSPNGVM 335
E LL ++ KD++ C+K+I + A G KRK G+ + P SP+GV+
Sbjct: 251 E--LLALIDAPKDEMAECAKIISEEAAAAAAGGIVIGGENKRK-GAAGLYSAPASPSGVI 307
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Query: 108 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKV 167
R +A+ W+ K F L LA+NYLDRFL L K W QL AVACLSLAAK+
Sbjct: 69 RIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKI 128
Query: 168 EETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL-GLK 226
EET VP L+ LQV FVFEAK++QRME+LVL+ L+W++ VTP S++ Y ++ G
Sbjct: 129 EETNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYD 188
Query: 227 GYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHV 266
+ R +++ S F+++ S +A A L V
Sbjct: 189 QEPHSRLVTRSLQVIASTTKGIDFLEFRASEIAAAVALSV 228
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 130/238 (54%), Gaps = 20/238 (8%)
Query: 104 LSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSL 163
+ AR+ V W++K NA + F+ TA +AV YLDRFL + RDK W QL +VACLSL
Sbjct: 96 MKNARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSL 155
Query: 164 AAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL 223
AAKVEE + P L + +++ +++ ++ RME+LVL+TL+W+M TP S+L+ +
Sbjct: 156 AAKVEERRPPRLPEFKLD----MYDCASLMRMELLVLTTLKWQMITETPFSYLNCFTAKF 211
Query: 224 GLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLL 283
+ R + ++I S + Y PS +A A +L + +N E++ ++ +L
Sbjct: 212 RHDERK--AIVLRAIECIFASIKVISSVGYQPSTIALAAIL-IARNKETAPNLD---ELK 265
Query: 284 NILGT-----DKDKVEHC-SKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVM 335
+++G+ D V C +K+++Q +Q + + ++V + GS + M
Sbjct: 266 SVVGSLWQQLDTGHVYSCYNKMMIQEDRSMQS----TTEVASSGVSVAHIGGSEDSAM 319
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 2/118 (1%)
Query: 107 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDK-PWMAQLAAVACLSLAA 165
AR AV W+L+ ++ F TA LA+ Y DRF ++ R+ PW A+L ++AC+S+AA
Sbjct: 99 ARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVAA 158
Query: 166 KVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL 223
K+EE Q P L + + VF + +I+RME+LVLSTL W+M VTP FL + RL
Sbjct: 159 KMEEYQSPALSEFDAGGGR-VFCSDSIRRMELLVLSTLGWRMGAVTPFDFLPCFSSRL 215
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 101/185 (54%), Gaps = 7/185 (3%)
Query: 79 DDELSTLLSKEVPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDR 138
+D ++ L+ KE N + L + + S R A+DW+L + F TA +A++Y D
Sbjct: 45 EDYVADLVLKE--NLRFETLPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDL 102
Query: 139 FLFS--FQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKTIQRME 196
FL LQ+D+ W +L +VACLSLAAK+EE VP L +D FVF+ I++ E
Sbjct: 103 FLHKRFIGLQKDETWAMRLLSVACLSLAAKMEERIVPGLSQYP-QDHDFVFKPDVIRKTE 161
Query: 197 ILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWE--FLKRCDRILLSAISDSSFMQYL 254
+L+LSTL WKMN +TP + +Y ++ + + L R LL+ + SF +Y
Sbjct: 162 LLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTKEISFTEYR 221
Query: 255 PSVMA 259
V+A
Sbjct: 222 QFVVA 226
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 107 ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRD-KPWMAQLAAVACLSLAA 165
AR V W+L+ + F TA LA+ Y DRF + R PW A+L AVAC+SLAA
Sbjct: 108 ARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAA 167
Query: 166 KVEETQVPLLLDLQ--VEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL 223
K+EE + P L + + V D + F I+RME+LVLSTL W+M VTP +L ++ RL
Sbjct: 168 KMEEYRAPALSEFRAGVGDDGYEFSCVCIRRMELLVLSTLDWRMAAVTPFDYLPCLSSRL 227
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 135/273 (49%), Gaps = 31/273 (11%)
Query: 95 YNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQ 154
++ LK++ L R++A+ + + + + +LT LAVNYLDRFL S + + KPW+ +
Sbjct: 45 FHSLKSSAFLLSNRNQAISSITQYSRKFDDPSLT-YLAVNYLDRFLSSEDMPQSKPWILK 103
Query: 155 LAAVACLSLAAKVEETQVPLLLDLQVEDIKF---VFEAKTIQRMEILVLSTLQWKMNPVT 211
L +++C+SL+AK+ + D+ V D+ F+A+ I+RME ++L L+W+M VT
Sbjct: 104 LISLSCVSLSAKMRKP------DMSVSDLPVEGEFFDAQMIERMENVILGALKWRMRSVT 157
Query: 212 PLSFLDYIARRLGLKG----YLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVV 267
P SFL + LK L + + S D SF+++ PSV+A A +L
Sbjct: 158 PFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFAS 217
Query: 268 QNIESSLGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVV 327
+ + ++ +KD++ C K I Q + + G+ GS V
Sbjct: 218 FELCPLQFPCFSNRINQCTYVNKDELMECYKAI-QERDIIVGENE-------GSTETAV- 268
Query: 328 PGSPNGVMDVSFSSSDSSNDSWSVASSVSSSPE 360
V+D FSS +S S+ + SSSP+
Sbjct: 269 -----NVLDQQFSSCESDK---SITITASSSPK 293
>sp|Q9LZM0|CCD71_ARATH Putative cyclin-D7-1 OS=Arabidopsis thaliana GN=CYCD7-1 PE=3 SV=1
Length = 341
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 104 LSRARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSL 163
L+ R A W+++ + + + T A N DRF++ WM +L AV LS+
Sbjct: 74 LTDYRFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSI 133
Query: 164 AAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL 223
A+K E PLL +L++E + +F T+ +ME+++L L+W++N VT +F + ++
Sbjct: 134 ASKFNEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKI 193
Query: 224 GLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATM 263
G+ G + R LL I D +QY PSV+A A +
Sbjct: 194 GMVGDHM--IMNRITNHLLDVICDLKMLQYPPSVVATAAI 231
>sp|Q53MB7|CCD71_ORYSJ Putative cyclin-D7-1 OS=Oryza sativa subsp. japonica GN=CYCD7-1
PE=3 SV=1
Length = 320
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
Query: 126 ALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVED-IK 184
A TA A NYLDRFL + + WM ++ +V CLSLA K++E +P L DLQ+E+ +
Sbjct: 103 AATAFNAANYLDRFLSINCHLKWEEWMVEVVSVGCLSLACKLDEVTIPSLHDLQMEEAMG 162
Query: 185 FVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSA 244
F A TI+ ME+ +L L+W++ VTP SFL + +LL +
Sbjct: 163 HSFRASTIRDMELTLLKALRWRLACVTPFSFLPVTTTTTTTRA------------LLLRS 210
Query: 245 ISDSSFMQYLPSVMANATM 263
+ D SF+++ S++A + +
Sbjct: 211 LLDPSFLRFDASLLAASAL 229
>sp|Q69S43|CCD61_ORYSJ Cyclin-D6-1 OS=Oryza sativa subsp. japonica GN=CYCD6-1 PE=2 SV=1
Length = 320
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 129 ALLAVNYLDRFLFSFQLQRDK-PWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKFVF 187
A LA+NY+DR+L QL ++ PW +L A++CL+LAAK++ D+Q + +F+F
Sbjct: 79 AYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAADIQRGE-EFMF 137
Query: 188 EAKTIQRMEILVLSTLQWKMNPVTPLSFLDYI 219
+ IQRME +VL+ L+W+ VTPL+FL +
Sbjct: 138 DEAKIQRMEQMVLNALEWRTRSVTPLAFLGFF 169
>sp|P30281|CCND3_HUMAN G1/S-specific cyclin-D3 OS=Homo sapiens GN=CCND3 PE=1 SV=2
Length = 292
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 14/240 (5%)
Query: 114 WMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVP 173
WML+V LA+NYLDR+L ++ + QL C+ LA+K+ ET P
Sbjct: 63 WMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQ---LQLLGAVCMLLASKLRET-TP 118
Query: 174 LLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEF 233
L ++ + ++ E+LVL L+W + V FL +I RL L
Sbjct: 119 LTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALV 178
Query: 234 LKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIE--SSLGVEYEKQLLNILGTDKD 291
K L +D +F Y PS++A ++ VQ + S G E + L I GT+ D
Sbjct: 179 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVD 238
Query: 292 KVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDVSFSSSDSSNDSWSV 351
+ C EQ++ +S++ + + P P +P G S + + D ++
Sbjct: 239 CLRACQ-------EQIEAALRESLREASQTSSSP-APKAPRGSSSQGPSQTSTPTDVTAI 290
>sp|P47794|CCNE1_DANRE G1/S-specific cyclin-E1 OS=Danio rerio GN=ccne1 PE=2 SV=1
Length = 410
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 130/290 (44%), Gaps = 59/290 (20%)
Query: 56 FINKTKTIPVPVPMLHEQDLSWQDDELSTLLSKEVPNRLY----NILKTNPSLS-RARSE 110
FI T++ P+P +D W + LL K ++LY +++ +P+L + R+
Sbjct: 98 FITPTRSTPLPALCWASKDEVWNN-----LLGK---DKLYLRDTRVMERHPNLQPKMRAI 149
Query: 111 AVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEET 170
+DW+++V Y T L +Y DRF+ + + QL ++CL +AAK+EE
Sbjct: 150 LLDWLMEVCEVYKLHRETFYLGQDYFDRFMATQENVLKT--TLQLIGISCLFIAAKMEEI 207
Query: 171 QVPLLLDLQVEDIKFVFEAKT----IQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLK 226
P +V +V + I MEI+++ L W ++P+TP+++L+
Sbjct: 208 YPP-----KVHQFAYVTDGACTEDDILSMEIIIMKELNWSLSPLTPVAWLNI-------- 254
Query: 227 GYLCWEFLKRCDRILLSAISDSSFMQ----------------YLPSVMANATMLHVVQNI 270
Y+ +LK +L + ++F+Q + S++A + + H
Sbjct: 255 -YMQMAYLKETAEVLTAQYPQATFVQIAELLDLCILDVRSLEFSYSLLAASALFHF---- 309
Query: 271 ESSLGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFG 320
SSL + ++ + G +E C + ++ A ++ GS ++K G
Sbjct: 310 -SSLEL-----VIKVSGLKWCDLEECVRWMVPFAMSIREAGSSALKTFKG 353
>sp|Q3MHH5|CCND3_BOVIN G1/S-specific cyclin-D3 OS=Bos taurus GN=CCND3 PE=2 SV=1
Length = 292
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 14/240 (5%)
Query: 114 WMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVP 173
WML+V LA+NYLDR+L ++ + QL C+ LA+K+ ET P
Sbjct: 63 WMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQ---LQLLGAVCMLLASKLRET-TP 118
Query: 174 LLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEF 233
L ++ + ++ E+LVL L+W + V FL I RL L
Sbjct: 119 LTIEKLCIYTDHSVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPRDRQALV 178
Query: 234 LKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIE--SSLGVEYEKQLLNILGTDKD 291
K L +D +F Y PS++A ++ VQ + S+ G E + L I GT+ D
Sbjct: 179 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSTSGDELTELLAGIAGTEVD 238
Query: 292 KVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDVSFSSSDSSNDSWSV 351
+ C EQ++ +S++ + P P +P G S + + D ++
Sbjct: 239 CLRACQ-------EQIEAALRESLREAAQTSPSP-APKAPRGSSSQGPSQTSTPTDVTAI 290
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 108 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKV 167
RS +DW+++V Y + T LAVNY+DR+L + + QL V C+ +AAK
Sbjct: 212 RSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQN---LQLLGVTCMMIAAKY 268
Query: 168 EETQVPLLLDLQVEDIKFVFEAKTIQR----MEILVLSTLQWKMNPVTPLSFLDYIARRL 223
EE VP QVED ++ + ++ ME VL+ L++++ T FL R
Sbjct: 269 EEVCVP-----QVEDFCYITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAA 323
Query: 224 GLKGYLCWEFLKRCDRILLSAIS--DSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQ 281
+ + L C L+ +S D + ++Y PS++A A+ + + Q +
Sbjct: 324 QGRKEV-PSLLSECLACYLTELSLLDYAMLRYAPSLVA-ASAVFLAQYTLHPSRKPWNAT 381
Query: 282 LLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFG 320
L + +E C K ++QL + +I++K+
Sbjct: 382 LEHYTSYRAKHMEACVKNLLQLCNEKLSSDVVAIRKKYS 420
>sp|P20248|CCNA2_HUMAN Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2
Length = 432
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 98 LKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLA 156
+K P ++ + R+ VDW+++V Y T LAVNY+DRFL S + R K QL
Sbjct: 200 MKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLV 256
Query: 157 AVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFL 216
A + LA+K EE P + + V + K + RME LVL L + + T FL
Sbjct: 257 GTAAMLLASKFEEIYPPEVAEF-VYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFL 315
Query: 217 -DYIARR--LGLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESS 273
Y + K FL LS I +++YLPSV+A A H+ + +
Sbjct: 316 TQYFLHQQPANCKVESLAMFLGE-----LSLIDADPYLKYLPSVIAGAA-FHLA--LYTV 367
Query: 274 LGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKF 319
G + + L+ G + ++ C + Q + QSI+ K+
Sbjct: 368 TGQSWPESLIRKTGYTLESLKPCLMDLHQTYLKAPQHAQQSIREKY 413
>sp|Q0P5D3|CCND2_BOVIN G1/S-specific cyclin-D2 OS=Bos taurus GN=CCND2 PE=2 SV=1
Length = 289
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 17/220 (7%)
Query: 108 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKV 167
R WML+V LA+NYLDRFL + QL C+ LA+K+
Sbjct: 56 RRMVATWMLEVCEEQKCEEEVFPLAINYLDRFLAGVPTPKTH---LQLLGAVCMFLASKL 112
Query: 168 EETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKG 227
+ET +PL + + + + E++VL L+W + VTP F+++I R+L
Sbjct: 113 KET-IPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQPS 171
Query: 228 YLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVV------QNIESSLGVEYEKQ 281
K + +D F Y PS++A ++ + +++ S G
Sbjct: 172 EKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEDVSSLTGDALVDL 231
Query: 282 LLNILGTDKDKVEHCSKLI-------MQLAEQVQGQGSQS 314
L I TD D ++ C + I +Q Q QG GS+S
Sbjct: 232 LAKITNTDVDCLKACQEQIEVVLLNSLQQYRQDQGDGSKS 271
>sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB6 PE=2 SV=2
Length = 380
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 77 WQDDELSTLLSKEV---PNRLYNILKTNPS--LSRARSEAVDWMLKVNAHYSFTALTALL 131
+ D S L KE+ P Y + +P S R+ +DW+++V+ + T L
Sbjct: 120 YTDSIFSHLYEKEIQMLPTHNYLMDTQSPYHLKSSMRALLIDWLVEVHEKFHCLPETLFL 179
Query: 132 AVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQ-VEDIKFVFEAK 190
A+N LDRFL ++ +K QL + CL +A K EE ++P + + V D E
Sbjct: 180 AINLLDRFLSQNVVKLNK---LQLLCITCLFIACKFEEVKLPKITNFAYVTDGAATVEG- 235
Query: 191 TIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSAISDSSF 250
I++ E+ VLS+L + ++ PL+F+ RR+ C E I+ +I + F
Sbjct: 236 -IRKAELFVLSSLGYNISLPNPLNFI----RRISKADNYCIETRNMAKFIMEYSICCNKF 290
Query: 251 MQYLPSVMANATM 263
+ PS +A +M
Sbjct: 291 IHLKPSYLAAMSM 303
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 23/231 (9%)
Query: 98 LKTNPSLSR-ARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLA 156
+K P ++ R+ VDW+++V Y T LAVNY+DRFL S + R K QL
Sbjct: 164 MKKQPDITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLV 220
Query: 157 AVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFL 216
A + LA+K EE P + + V + K + RME L+L L + + T FL
Sbjct: 221 GTAAMLLASKFEEIYPPEVAEF-VYITDDTYNKKQVLRMEHLILKVLSFDLAAPTINQFL 279
Query: 217 D--YIARRLGLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSL 274
++ ++ K +L L+ I +++YLPSV+A A H+ +
Sbjct: 280 TQYFLHQQTNAKVESLSMYLGE-----LTLIDADPYLKYLPSVIA-AAAFHLASY--TIT 331
Query: 275 GVEYEKQLLNILGTDKDKVEHC----SKLIMQLAEQVQGQGSQSIKRKFGS 321
G + + L + G + ++ C + ++ A+ Q QSI+ K+ S
Sbjct: 332 GQTWPESLCKVTGYTLEHIKPCLMDLHRTYLKAAQHTQ----QSIREKYKS 378
>sp|Q92161|CCNA1_CARAU Cyclin-A1 OS=Carassius auratus GN=ccna1 PE=2 SV=1
Length = 391
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 98 LKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLA 156
++ P ++ R VDW+++V Y + T LAVNYLDRFL + R K QL
Sbjct: 159 MRKQPDITNCMRVILVDWLVEVGEEYKLCSETLFLAVNYLDRFLSCMSVLRGK---LQLV 215
Query: 157 AVACLSLAAKVEETQVPLLLDLQVEDIKFV----FEAKTIQRMEILVLSTLQWKMNPVTP 212
A + LAAK EE P +V++ ++ + K + RME +L L + M T
Sbjct: 216 GTAAVLLAAKYEEVYPP-----EVDEFVYITDDTYTKKQLLRMEQHLLRVLAFDMTAPTV 270
Query: 213 LSFLDYIARRLGLKGYLCWEFLKRCDRILLSAISD-SSFMQYLPSVMANATMLHVVQNIE 271
FL + L+G++C + + ++ + F+QYLPS A A + + N
Sbjct: 271 HQFL----MQYTLEGHICARTVNLALYLSELSLLEVDPFVQYLPSKTAAAA--YCLANYT 324
Query: 272 SSLGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKF 319
+ GV + + L G + C + +L G+ Q+I+ K+
Sbjct: 325 LN-GVLWPENLYAFTGYSLAVIIPCLMELHKLHLGAAGRPQQAIQEKY 371
>sp|P30274|CCNA2_BOVIN Cyclin-A2 OS=Bos taurus GN=CCNA2 PE=1 SV=2
Length = 430
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 16/226 (7%)
Query: 98 LKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLA 156
+K P ++ + R+ VDW+++V Y T LAVNY+DRFL S + R K QL
Sbjct: 198 MKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLV 254
Query: 157 AVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFL 216
A + LA+K EE P + + V + K + RME LVL L + + T FL
Sbjct: 255 GTAAMLLASKFEEIYPPEVAEF-VYITDDTYTKKQVLRMEHLVLKVLAFDLAAPTINQFL 313
Query: 217 -DYIARR--LGLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESS 273
Y + K FL LS I +++YLPSV+A A H+ + +
Sbjct: 314 TQYFLHQQPANCKVESLAMFLGE-----LSLIDADPYLKYLPSVIA-AAAFHLA--LYTV 365
Query: 274 LGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKF 319
G + + L+ G + ++ C + Q + QSI+ K+
Sbjct: 366 TGQSWPESLVQKTGYTLETLKPCLLDLHQTYLRAPQHAQQSIREKY 411
>sp|P37881|CCNA2_MESAU Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1
Length = 421
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 98 LKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLA 156
+K P ++ + R+ VDW+++V Y T LAVNY+DRFL S + R K QL
Sbjct: 189 MKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLV 245
Query: 157 AVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFL 216
A + LA+K EE P + + V + K + RME LVL L + + T FL
Sbjct: 246 GTAAMLLASKFEEIYPPEVAEF-VYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFL 304
Query: 217 D-YIARR--LGLKGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESS 273
+ Y + K FL LS I +++YLPS++A A H+ + +
Sbjct: 305 NQYFLHQQPANCKVESLAMFLGE-----LSLIDADPYLKYLPSLIAGAA-FHLA--LYTV 356
Query: 274 LGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKF 319
G + + L+ G + ++ C + Q + QSI+ K+
Sbjct: 357 TGQSWPESLVQKTGYTLESLKPCLMDLHQTYLRAAQHTQQSIREKY 402
>sp|P78396|CCNA1_HUMAN Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1
Length = 465
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 96 NILKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQ 154
+ +K P ++ R+ VDW+++V Y A T LAVN+LDRFL + R K Q
Sbjct: 231 HYMKKQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGK---LQ 287
Query: 155 LAAVACLSLAAKVEETQVPLLLDLQVEDIKFV----FEAKTIQRMEILVLSTLQWKMNPV 210
L A + LA+K EE P +V++ ++ + + + +ME L+L L + +
Sbjct: 288 LVGTAAMLLASKYEEIYPP-----EVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVP 342
Query: 211 TPLSFLDYIARRLGLKGYLCWEFLKRCDRIL-LSAISDSSFMQYLPSVMANATM 263
T FL RR G +C + LS + F++YLPS++A A
Sbjct: 343 TTNQFLLQYLRRQG----VCVRTENLAKYVAELSLLEADPFLKYLPSLIAAAAF 392
>sp|P04962|CCNA_SPISO G2/mitotic-specific cyclin-A OS=Spisula solidissima PE=2 SV=1
Length = 422
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 48/263 (18%)
Query: 77 WQDDELSTLLSKEVPNRL---YNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAV 133
+++D + L E+ NR Y +T+ + S R VDW+++V+ T L V
Sbjct: 163 YEEDIYNYLRQAEMKNRAKPGYMKRQTDITTS-MRCILVDWLVEVSEEDKLHRETLFLGV 221
Query: 134 NYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVEDIKFV----FEA 189
NY+DRFL + R K QL A + LAAK EE P V++ ++ + +
Sbjct: 222 NYIDRFLSKISVLRGK---LQLVGAASMFLAAKYEEIYPP-----DVKEFAYITDDTYTS 273
Query: 190 KTIQRMEILVLSTLQWKMN-PVTPLSFLDYIARRLGLKGYLCWEFLKRCDR--------- 239
+ + RME L+L L + + P T + C +FLK CD
Sbjct: 274 QQVLRMEHLILKVLTFDVAVPTT---------------NWFCEDFLKSCDADDKLKSLTM 318
Query: 240 --ILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVE-YEKQLLNILGTDKDKVEHC 296
L+ I ++++YLPS+ A A + SLG+E + + L+ G + C
Sbjct: 319 FLTELTLIDMDAYLKYLPSITAAAALCLA----RYSLGIEPWPQNLVKKTGYEIGHFVDC 374
Query: 297 SKLIMQLAEQVQGQGSQSIKRKF 319
K + + + + Q+++ K+
Sbjct: 375 LKDLHKTSLGAESHQQQAVQEKY 397
>sp|O96020|CCNE2_HUMAN G1/S-specific cyclin-E2 OS=Homo sapiens GN=CCNE2 PE=1 SV=1
Length = 404
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 38/207 (18%)
Query: 56 FINKTKTIPVPVPMLHEQDLSW--QDDELSTLLSKE---VPNRLYNILKTNPSLSRARSE 110
FIN P P+P DLSW + +L KE V ++ + +L ++ + RS
Sbjct: 96 FIN-----PSPLP-----DLSWGCSKEVWLNMLKKESRYVHDKHFEVLHSDLE-PQMRSI 144
Query: 111 AVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRD-KPWMAQLAAVACLSLAAKVEE 169
+DW+L+V Y+ T LA ++ DRF+ + Q+D M QL + L +A+K+EE
Sbjct: 145 LLDWLLEVCEVYTLHRETFYLAQDFFDRFMLT---QKDINKNMLQLIGITSLFIASKLEE 201
Query: 170 TQVPLLLDLQVEDIKFVFEA----KTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGL 225
P ++++ +V + + I RME+++L L+W++ PVT +S+L+
Sbjct: 202 IYAP-----KLQEFAYVTDGACSEEDILRMELIILKALKWELCPVTIISWLNL------- 249
Query: 226 KGYLCWEFLKRCDRILLSAISDSSFMQ 252
+L + LK ++LL S +F+Q
Sbjct: 250 --FLQVDALKDAPKVLLPQYSQETFIQ 274
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 22/229 (9%)
Query: 98 LKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLA 156
+K P ++ + R+ VDW+++V Y T LAVNY+DRFL S + R K QL
Sbjct: 190 MKRQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGK---LQLV 246
Query: 157 AVACLSLAAKVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFL 216
A + LA+K EE P + + V + K + RME LVL L + + T FL
Sbjct: 247 GTAAMLLASKFEEIYPPEVAEF-VYITDDTYSKKQVLRMEHLVLKVLAFDLAAPTVNQFL 305
Query: 217 -DYIARRLGLKGYLC-----WEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNI 270
Y L L+ C FL LS I +++YLPS++A A H+ +
Sbjct: 306 TQYF---LHLQPANCKVESLAMFLGE-----LSLIDADPYLKYLPSLIAGAA-FHLA--L 354
Query: 271 ESSLGVEYEKQLLNILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKF 319
+ G + + L G + ++ C + Q + QSI+ K+
Sbjct: 355 YTVTGQSWPESLAQQTGYTLESLKPCLVDLHQTYLKAPQHAQQSIREKY 403
>sp|P24861|CCNA_PATVU G2/mitotic-specific cyclin-A OS=Patella vulgata PE=2 SV=1
Length = 426
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 20/173 (11%)
Query: 98 LKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLA 156
+K P ++ + RS VDWM++V+ Y T LA+NY+DRFL + R K QL
Sbjct: 193 MKKQPDITNSMRSILVDWMVEVSEEYKLHRETLFLAINYIDRFLSQMSVLRGK---LQLV 249
Query: 157 AVACLSLAAKVEETQVPLLLDLQVEDIKFV----FEAKTIQRMEILVLSTLQWKMNPVTP 212
A + +A+K EE P +V + ++ +E K + RME L+L L + + T
Sbjct: 250 GAASMFIASKYEEIYPP-----EVSEFVYITDDTYEQKQVLRMEHLILKVLSFDVAQPTI 304
Query: 213 LSFLDYIARRLGLKGYLCWEFLKRCDRIL--LSAISDSSFMQYLPSVMANATM 263
F D A+ E K L L+ + +++YLPS +A A++
Sbjct: 305 NWFTDTYAKMADTD-----ETTKSLSMYLSELTLVDADPYLKYLPSTIAAASL 352
>sp|Q5E9K7|CCNE2_BOVIN G1/S-specific cyclin-E2 OS=Bos taurus GN=CCNE2 PE=2 SV=1
Length = 404
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 38/207 (18%)
Query: 56 FINKTKTIPVPVPMLHEQDLSW--QDDELSTLLSKE---VPNRLYNILKTNPSLSRARSE 110
FIN P P+P DLSW D +L KE V ++ + +L + + RS
Sbjct: 96 FIN-----PSPLP-----DLSWGCSQDVWLNMLKKETRYVHDKHFEVLHSELE-PQMRSI 144
Query: 111 AVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRD-KPWMAQLAAVACLSLAAKVEE 169
+DW+L+V Y+ T LA ++ DRF+ + Q+D M QL + L +A+K+EE
Sbjct: 145 LLDWLLEVCEVYTLHRETFYLAQDFFDRFMLT---QKDINKNMLQLIGITSLFIASKLEE 201
Query: 170 TQVPLLLDLQVEDIKFVFEA----KTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGL 225
P ++++ +V + + I RME+ +L L+W++ PVT +S+L+
Sbjct: 202 IYAP-----KLQEFAYVTDGACSEEDILRMELAILKALKWELCPVTVISWLNL------- 249
Query: 226 KGYLCWEFLKRCDRILLSAISDSSFMQ 252
+L + LK ++LL S F+Q
Sbjct: 250 --FLQVDALKDAPKVLLPQYSQEKFIQ 274
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 16/272 (5%)
Query: 79 DDELSTLLSKE---VPNRLYNILKTNPSLSRARSEAVDWMLKVNAHYSFTALTALLAVNY 135
D L T+L E +P+ Y + + R WML+V LA+NY
Sbjct: 25 DRVLQTMLKAEENYLPSPNYFKCVQKEIVPKMRKIVATWMLEVCEEQKCEEEVFPLAMNY 84
Query: 136 LDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVPLLLD-LQVEDIKFVFEAKTIQR 194
LDRFL ++ K QL C+ LA+K++ET VPL + L + V + +Q
Sbjct: 85 LDRFL---SVEPTKKTRLQLLGATCMFLASKMKET-VPLTAEKLCIYTDNSVRPGELLQ- 139
Query: 195 MEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEFLKRCDRILLSAISDSSFMQYL 254
ME+L L+ L+W + VTP F+++ +L + K + +D +F+
Sbjct: 140 MELLALNKLKWDLASVTPHDFIEHFLAKLPIHQSSKQILRKHAQTFVALCATDVNFIASP 199
Query: 255 PSVMANATMLHVVQNI-----ESSLGVEYEKQLLN-ILGTDKDKVEHCSKLIMQLAEQVQ 308
PS++A ++ VQ + +S L + L+ ++ +D D + C + I L E
Sbjct: 200 PSMIAAGSVAAAVQGLYLKSTDSCLSSQNLTNFLSQVIRSDPDCLRSCQEQIESLLESSL 259
Query: 309 GQGSQSIKRKFGSITVPV-VPGSPNGVMDVSF 339
Q Q I + + V + +P V D++
Sbjct: 260 RQAQQHISTETKRVEEDVDLSCTPTDVRDINI 291
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 108 RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKV 167
R+ +DW+++V Y T L VNY+DR+L S + R K QL VACL +A+K
Sbjct: 118 RAVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKVINRRK---MQLLGVACLLIASKY 174
Query: 168 EETQVPLLLDLQVEDIKFV----FEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRL 223
EE P QVE++ ++ + + +ME VL L+++M T FL RR
Sbjct: 175 EEICPP-----QVEELCYISDNTYTKDEVLKMEASVLKYLKFEMTAPTTKCFL----RRF 225
Query: 224 GLKGYLCWEFLKRCDRILLSAISDSSFMQ-----YLPSVMANATML 264
+C E L + I++ S ++ Y+PS++A +++
Sbjct: 226 LRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYVPSLIAASSIF 271
>sp|P46278|CCNB2_MEDSV G2/mitotic-specific cyclin-2 OS=Medicago sativa subsp. varia PE=2
SV=1
Length = 434
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 106 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAA 165
R R+ VDW+++V+ + T L VN +DRFL + R K QL + + LA
Sbjct: 207 RMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVAMLLAC 263
Query: 166 KVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGL 225
K EE VP++ DL + + K I ME L+L+TLQ+ M+ T F+ RR L
Sbjct: 264 KYEEVSVPVVSDL-IHIADRAYTRKDILEMEKLMLNTLQYNMSLPTAYVFM----RRF-L 317
Query: 226 KGYLCWEFLKRCDRILLS-AISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLN 284
K + L+ L+ ++ + +++ PS++A A ++ Q S + K
Sbjct: 318 KAAQADKKLELVAFFLVDLSLVEYEMLKFPPSLVA-AAAVYTAQCTVSGFK-HWNKTCEW 375
Query: 285 ILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFGS 321
+D++ CS L++ ++ + RK+GS
Sbjct: 376 HTNYSEDQLLECSMLMVGFHQKAGAGKLTGVHRKYGS 412
>sp|P30282|CCND3_MOUSE G1/S-specific cyclin-D3 OS=Mus musculus GN=Ccnd3 PE=2 SV=1
Length = 292
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 14/240 (5%)
Query: 114 WMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVP 173
WML+V LA+NYLDR+L ++ + QL CL LA+K+ ET P
Sbjct: 63 WMLEVCEEQRCEEDVFPLAMNYLDRYLSCVPTRKAQ---LQLLGTVCLLLASKLRET-TP 118
Query: 174 LLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEF 233
L ++ ++ E+LVL L+W + V FL I RL L
Sbjct: 119 LTIEKLCIYTDQAVAPWQLREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALV 178
Query: 234 LKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIES-SLGVEYEKQLL-NILGTDKD 291
K L +D +F Y PS++A ++ V + + S+ + +LL I GT+ D
Sbjct: 179 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVLGLGACSMSADELTELLAGITGTEVD 238
Query: 292 KVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDVSFSSSDSSNDSWSV 351
+ C EQ++ +S++ + P VP +P G S + + D ++
Sbjct: 239 CLRACQ-------EQIEAALRESLREAAQTAPSP-VPKAPRGSSSQGPSQTSTPTDVTAI 290
>sp|P30278|CCNB2_MEDSA G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2
SV=1
Length = 328
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 12/217 (5%)
Query: 106 RARSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAA 165
R R+ VDW+++V+ + T L VN +DRFL + R K QL + + LA
Sbjct: 101 RMRAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKK---LQLVGLVAMLLAC 157
Query: 166 KVEETQVPLLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGL 225
K EE VP++ DL + + K I ME L+L+TLQ+ M+ T Y+ R L
Sbjct: 158 KYEEVSVPVVSDL-IHIADRAYTRKDILEMEKLMLNTLQYNMSLPTA-----YVFMRRFL 211
Query: 226 KGYLCWEFLKRCDRILLS-AISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLN 284
K + L+ L+ ++ + +++ PS++A A ++ Q S + K
Sbjct: 212 KAAQADKKLELVAFFLVDLSLVEYEMLKFPPSLVA-AAAVYTAQCTVSGFK-HWNKTCEW 269
Query: 285 ILGTDKDKVEHCSKLIMQLAEQVQGQGSQSIKRKFGS 321
+D++ CS L++ ++ + RK+GS
Sbjct: 270 HTNYSEDQLLECSMLMVGFHQKAGAGKLTGVHRKYGS 306
>sp|P48961|CCND3_RAT G1/S-specific cyclin-D3 OS=Rattus norvegicus GN=Ccnd3 PE=2 SV=1
Length = 293
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 13/240 (5%)
Query: 114 WMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQLAAVACLSLAAKVEETQVP 173
WML+V LA+NYLDR+L ++ + QL CL LA+K+ ET P
Sbjct: 63 WMLEVCEEQRCEEDVFPLAMNYLDRYLSCVPTRKAQ---LQLLGTVCLLLASKLRET-TP 118
Query: 174 LLLDLQVEDIKFVFEAKTIQRMEILVLSTLQWKMNPVTPLSFLDYIARRLGLKGYLCWEF 233
L ++ ++ E+LVL L+W + V FL I RL L
Sbjct: 119 LTIEKLCIYTDQAMAPWQLREWEVLVLGKLKWDLAAVIAHDFLALILHRLSLPSDRQALV 178
Query: 234 LKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIES-SLGVEYEKQLL-NILGTDKD 291
K L +D +F Y PS++A ++ V + + S+ + +LL I GT+ D
Sbjct: 179 KKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVLGLGACSMSADELTELLAGITGTEVD 238
Query: 292 KVEHCSKLIMQLAEQVQGQGSQSIKRKFGSITVPVVPGSPNGVMDVSFSSSDSSNDSWSV 351
+ C + +Q++ +S++ + P VP +P G S + + D ++
Sbjct: 239 CLRACQE------QQIEAALRESLREAAQTAPSP-VPKAPGGSSSQGPSQTSTPTDVTAI 291
>sp|Q61456|CCNA1_MOUSE Cyclin-A1 OS=Mus musculus GN=Ccna1 PE=1 SV=2
Length = 421
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 96 NILKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQ 154
+ ++ P ++ R+ VDW+++V Y T LAVN+LDRFL + R K Q
Sbjct: 187 HYMRKQPDITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGK---LQ 243
Query: 155 LAAVACLSLAAKVEETQVPLLLDLQVEDIKFV----FEAKTIQRMEILVLSTLQWKMNPV 210
L A + LA+K EE P V++ ++ + + + RME L+L L + +
Sbjct: 244 LVGTAAILLASKYEEIYPP-----DVDEFVYITDDTYTKRQLLRMEHLLLKVLAFDLTVP 298
Query: 211 TPLSFLDYIARRLGLKGYLCWEFLKRCDRIL-LSAISDSSFMQYLPSVMANA 261
T FL RR G +C + LS + F++YLPS++A A
Sbjct: 299 TTNQFLLQYLRRQG----VCIRTENLAKYVAELSLLEADPFLKYLPSLVAAA 346
>sp|O15995|CCNE_HEMPU G1/S-specific cyclin-E OS=Hemicentrotus pulcherrimus GN=CYCE PE=2
SV=1
Length = 424
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 127/271 (46%), Gaps = 43/271 (15%)
Query: 66 PVPMLHEQDLSWQDDELSTLLSKE--VPNRLYNILKTNPSLS-RARSEAVDWMLKVNAHY 122
P+P+LH DL E+ T+++++ + R ++ LK++PSL R R+ +DW+++V Y
Sbjct: 115 PIPLLHWDDLP----EVWTIMTRKEALCPRKHDCLKSHPSLGERMRAILLDWLIEVCEVY 170
Query: 123 SFTALTALLAVNYLDRFLFSFQ-LQRDKPWMAQLAAVACLSLAAKVEETQVPLLLDLQVE 181
+ LA +++DR+L + + + + K QL + L +AAK+EE P ++
Sbjct: 171 RLHRESFYLAADFVDRYLAAKENVPKTK---LQLIGITSLFVAAKLEEIYPP-----KLH 222
Query: 182 DIKFVFEAKT----IQRMEILVLSTLQWKMNPVTPLSFLDY---------IARR---LGL 225
+ +V + I E+++L TL W + P+T ++L+ IA R
Sbjct: 223 EFAYVTDGACTDDQILDQELIMLMTLNWDLTPITVNTWLNAFMQICNAEEIANRKTNFHF 282
Query: 226 KGYLCWEFLKRCDRILLSAISDSSFMQYLPSVMANATMLHVVQNIESSLGVEYEKQLLNI 285
Y EF++ ++L D M + S++A + + HV E+ L++
Sbjct: 283 PSYSSTEFVQ-VAQLLDVCTLDIGSMDFDYSILAASALYHVTN----------EEVTLSV 331
Query: 286 LGTDKDKVEHCSKLIMQLAEQVQGQGSQSIK 316
G D + C + + A ++ G +K
Sbjct: 332 TGLKWDDIAACVQWMSTFAMTIREVGVAQLK 362
>sp|Q6AY13|CCNA1_RAT Cyclin-A1 OS=Rattus norvegicus GN=Ccna1 PE=2 SV=1
Length = 421
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 96 NILKTNPSLSRA-RSEAVDWMLKVNAHYSFTALTALLAVNYLDRFLFSFQLQRDKPWMAQ 154
+ ++ P ++ R+ VDW+++V Y T LAVN+LDRFL + R K Q
Sbjct: 187 HYMRKQPDITEGMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGK---LQ 243
Query: 155 LAAVACLSLAAKVEETQVPLLLDLQVEDIKFV----FEAKTIQRMEILVLSTLQWKMNPV 210
L A + LA+K EE P V++ ++ + + + RME L+L L + +
Sbjct: 244 LVGTAAILLASKYEEIYPP-----DVDEFVYITDDTYTKRQLLRMEHLLLKVLAFDLTVP 298
Query: 211 TPLSFLDYIARRLGLKGYLCWEFLKRCDRIL-LSAISDSSFMQYLPSVMANAT 262
T FL RR G +C + LS + F++YLPS++A A
Sbjct: 299 TTNQFLLQYLRRQG----VCIRTENLAKYVAELSLLEADPFLKYLPSLVAAAA 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,427,418
Number of Sequences: 539616
Number of extensions: 5754197
Number of successful extensions: 26862
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 26502
Number of HSP's gapped (non-prelim): 297
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)