Query 016175
Match_columns 394
No_of_seqs 306 out of 2402
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:10:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016175.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016175hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_A PDHE1-A type I, pyruvat 100.0 9E-81 3.1E-85 623.6 38.5 349 34-385 6-356 (365)
2 1qs0_A 2-oxoisovalerate dehydr 100.0 3.9E-73 1.3E-77 575.4 37.1 320 56-377 68-397 (407)
3 1w85_A Pyruvate dehydrogenase 100.0 2.7E-71 9.2E-76 555.9 36.5 312 55-377 37-352 (368)
4 2bfd_A 2-oxoisovalerate dehydr 100.0 1.9E-70 6.5E-75 555.3 39.3 323 55-378 48-373 (400)
5 1umd_A E1-alpha, 2-OXO acid de 100.0 1.8E-67 6.1E-72 528.4 39.4 320 56-377 30-353 (367)
6 2yic_A 2-oxoglutarate decarbox 100.0 3.5E-58 1.2E-62 501.7 22.6 320 33-359 84-450 (868)
7 2xt6_A 2-oxoglutarate decarbox 100.0 2.9E-57 9.8E-62 505.1 23.7 321 33-360 329-696 (1113)
8 2jgd_A 2-oxoglutarate dehydrog 100.0 1E-55 3.4E-60 484.8 23.7 320 33-359 164-522 (933)
9 3rim_A Transketolase, TK; TPP, 100.0 1.9E-31 6.5E-36 285.8 17.7 230 72-314 28-295 (700)
10 1gpu_A Transketolase; transfer 100.0 3.6E-31 1.2E-35 284.0 16.5 232 70-315 11-276 (680)
11 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 7.5E-31 2.6E-35 279.1 17.2 233 46-299 10-291 (621)
12 1r9j_A Transketolase; domains, 100.0 2.1E-30 7E-35 277.8 17.9 233 70-315 9-276 (673)
13 2e6k_A Transketolase; structur 100.0 2.8E-31 9.5E-36 283.7 10.1 235 71-321 12-281 (651)
14 3kom_A Transketolase; rossmann 100.0 4.4E-29 1.5E-33 266.7 19.7 230 71-313 10-274 (663)
15 1itz_A Transketolase; calvin c 100.0 1.9E-29 6.5E-34 270.5 16.9 244 56-315 8-288 (675)
16 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 4.3E-30 1.5E-34 273.7 11.4 232 47-299 13-296 (629)
17 3mos_A Transketolase, TK; thia 100.0 3.6E-29 1.2E-33 265.8 18.0 232 57-303 3-253 (616)
18 2r8o_A Transketolase 1, TK 1; 100.0 2.1E-29 7.1E-34 270.0 15.7 233 70-315 7-274 (669)
19 3uk1_A Transketolase; structur 100.0 2.1E-29 7.1E-34 270.6 15.2 230 71-314 49-313 (711)
20 3m49_A Transketolase; alpha-be 100.0 1.8E-28 6.2E-33 262.7 16.7 230 72-314 35-299 (690)
21 3l84_A Transketolase; TKT, str 99.9 6.4E-28 2.2E-32 256.3 15.4 216 70-300 9-250 (632)
22 2qtc_A Pyruvate dehydrogenase 99.9 5.9E-25 2E-29 240.6 15.2 257 47-316 60-422 (886)
23 4feg_A Pyruvate oxidase; carba 99.8 1.9E-21 6.4E-26 206.0 9.5 162 168-339 418-597 (603)
24 3ahc_A Phosphoketolase, xylulo 99.7 1.1E-16 3.6E-21 173.3 10.5 199 92-298 81-333 (845)
25 1v5e_A Pyruvate oxidase; oxido 99.6 5.2E-15 1.8E-19 156.2 10.9 120 167-294 410-541 (590)
26 2pan_A Glyoxylate carboligase; 99.5 7.2E-15 2.5E-19 155.8 9.0 120 167-294 439-582 (616)
27 1q6z_A BFD, BFDC, benzoylforma 99.5 1.6E-14 5.4E-19 150.3 8.1 112 170-292 401-525 (528)
28 2uz1_A Benzaldehyde lyase; thi 99.5 1.8E-14 6.1E-19 151.1 8.2 117 167-292 416-546 (563)
29 2vk8_A Pyruvate decarboxylase 99.5 9.2E-15 3.1E-19 153.3 5.5 120 167-292 410-542 (563)
30 1ozh_A ALS, acetolactate synth 99.5 2.4E-14 8.1E-19 150.4 7.7 116 167-293 417-544 (566)
31 2pgn_A Cyclohexane-1,2-dione h 99.5 3.3E-14 1.1E-18 150.0 8.1 120 168-298 422-553 (589)
32 1ybh_A Acetolactate synthase, 99.5 4.3E-14 1.5E-18 149.1 8.5 119 167-296 423-562 (590)
33 2iht_A Carboxyethylarginine sy 99.5 3.8E-14 1.3E-18 149.0 7.6 115 167-292 433-561 (573)
34 2vbi_A Pyruvate decarboxylase; 99.5 6.8E-14 2.3E-18 146.8 9.3 116 167-292 406-533 (566)
35 1t9b_A Acetolactate synthase, 99.5 6.4E-14 2.2E-18 150.3 8.8 118 167-295 510-640 (677)
36 1ovm_A Indole-3-pyruvate decar 99.4 8.8E-14 3E-18 145.4 8.0 115 167-292 405-532 (552)
37 2vbf_A Branched-chain alpha-ke 99.4 1E-13 3.4E-18 145.6 8.2 115 167-292 422-551 (570)
38 3eya_A Pyruvate dehydrogenase 99.4 2.1E-13 7.1E-18 142.7 9.9 117 167-294 403-531 (549)
39 2wvg_A PDC, pyruvate decarboxy 99.4 2.1E-13 7E-18 143.2 9.2 116 167-292 410-541 (568)
40 2nxw_A Phenyl-3-pyruvate decar 99.4 1.2E-13 4.2E-18 145.0 7.3 115 167-292 419-542 (565)
41 2c31_A Oxalyl-COA decarboxylas 99.4 4.7E-13 1.6E-17 140.5 10.8 115 167-293 423-548 (568)
42 2q28_A Oxalyl-COA decarboxylas 99.4 8.7E-13 3E-17 138.2 12.1 117 166-294 417-546 (564)
43 3hww_A 2-succinyl-5-enolpyruvy 99.3 6.1E-13 2.1E-17 139.4 5.6 113 167-292 414-539 (556)
44 2x7j_A 2-succinyl-5-enolpyruvy 99.3 5.1E-13 1.8E-17 141.3 3.5 113 168-292 453-580 (604)
45 3lq1_A 2-succinyl-5-enolpyruvy 99.2 5.7E-12 2E-16 132.6 5.3 108 173-293 439-561 (578)
46 2c42_A Pyruvate-ferredoxin oxi 98.6 1.2E-07 4.1E-12 107.5 11.3 97 192-293 953-1071(1231)
47 3mos_A Transketolase, TK; thia 89.8 1.4 4.7E-05 46.4 10.4 102 176-288 368-470 (616)
48 1itz_A Transketolase; calvin c 87.1 3.1 0.0001 44.2 11.0 100 177-288 428-531 (675)
49 2r8o_A Transketolase 1, TK 1; 86.3 2.8 9.6E-05 44.5 10.1 108 169-288 407-518 (669)
50 2o1s_A 1-deoxy-D-xylulose-5-ph 86.2 2.3 7.7E-05 44.7 9.3 102 175-289 373-477 (621)
51 1yd7_A 2-keto acid:ferredoxin 86.2 0.73 2.5E-05 45.7 5.3 112 174-297 75-192 (395)
52 3kom_A Transketolase; rossmann 86.1 3.5 0.00012 43.7 10.7 110 168-287 407-518 (663)
53 3uk1_A Transketolase; structur 86.1 3.1 0.0001 44.6 10.3 107 168-287 452-562 (711)
54 2ozl_B PDHE1-B, pyruvate dehyd 85.2 1.4 4.9E-05 42.8 6.7 100 174-289 73-184 (341)
55 3l84_A Transketolase; TKT, str 84.9 3.4 0.00012 43.6 9.8 110 168-288 386-497 (632)
56 1gpu_A Transketolase; transfer 84.4 3.2 0.00011 44.1 9.5 108 169-288 414-526 (680)
57 1qs0_B 2-oxoisovalerate dehydr 84.2 1.4 4.7E-05 42.7 6.0 100 174-289 63-174 (338)
58 2o1x_A 1-deoxy-D-xylulose-5-ph 84.2 2 7E-05 45.1 7.8 101 175-289 376-479 (629)
59 2pgn_A Cyclohexane-1,2-dione h 84.1 7.1 0.00024 40.4 11.8 103 178-290 58-164 (589)
60 1ik6_A Pyruvate dehydrogenase; 83.4 1.6 5.5E-05 42.9 6.2 99 175-288 110-219 (369)
61 2e6k_A Transketolase; structur 83.1 4.1 0.00014 43.0 9.6 108 169-288 402-513 (651)
62 1r9j_A Transketolase; domains, 81.3 5.4 0.00018 42.3 9.7 108 169-288 407-518 (673)
63 3rim_A Transketolase, TK; TPP, 80.8 6.4 0.00022 42.1 10.0 108 169-288 437-550 (700)
64 2iht_A Carboxyethylarginine sy 80.3 5.1 0.00017 41.3 9.0 104 178-291 63-171 (573)
65 1w85_B Pyruvate dehydrogenase 80.2 4.1 0.00014 39.0 7.7 98 174-288 61-171 (324)
66 2bfd_B 2-oxoisovalerate dehydr 80.2 1.8 6.2E-05 42.0 5.2 101 174-289 78-190 (342)
67 1ybh_A Acetolactate synthase, 79.4 4.7 0.00016 41.8 8.4 103 177-290 64-171 (590)
68 3eya_A Pyruvate dehydrogenase 78.6 7 0.00024 40.0 9.3 101 178-289 56-160 (549)
69 3m49_A Transketolase; alpha-be 78.1 8.5 0.00029 41.0 10.0 111 168-288 431-543 (690)
70 2uz1_A Benzaldehyde lyase; thi 77.8 6.8 0.00023 40.2 9.0 105 177-291 55-164 (563)
71 1q6z_A BFD, BFDC, benzoylforma 77.5 5.4 0.00018 40.6 8.0 105 177-291 52-161 (528)
72 1ozh_A ALS, acetolactate synth 76.7 6 0.0002 40.8 8.2 103 177-290 62-169 (566)
73 1umd_B E1-beta, 2-OXO acid deh 76.3 6.4 0.00022 37.6 7.7 97 175-287 63-171 (324)
74 2wvg_A PDC, pyruvate decarboxy 76.2 9.8 0.00033 39.1 9.6 105 177-290 55-168 (568)
75 4feg_A Pyruvate oxidase; carba 76.1 7.9 0.00027 40.2 9.0 101 178-289 65-169 (603)
76 2nxw_A Phenyl-3-pyruvate decar 75.8 5.2 0.00018 41.2 7.4 104 178-290 74-185 (565)
77 1t9b_A Acetolactate synthase, 74.6 8.1 0.00028 40.9 8.7 102 177-289 134-240 (677)
78 2vbi_A Pyruvate decarboxylase; 74.3 9 0.00031 39.3 8.8 105 177-290 55-168 (566)
79 2c31_A Oxalyl-COA decarboxylas 74.2 6.3 0.00022 40.5 7.6 103 178-290 62-170 (568)
80 3lq1_A 2-succinyl-5-enolpyruvy 74.2 15 0.00051 37.8 10.4 104 178-290 64-177 (578)
81 2q28_A Oxalyl-COA decarboxylas 73.8 6.2 0.00021 40.5 7.4 103 178-290 60-168 (564)
82 2x7j_A 2-succinyl-5-enolpyruvy 71.4 7.8 0.00027 40.2 7.5 105 178-291 84-198 (604)
83 1v5e_A Pyruvate oxidase; oxido 69.4 8 0.00027 40.0 7.0 101 177-289 57-162 (590)
84 2pan_A Glyoxylate carboligase; 67.2 17 0.00057 37.8 8.9 103 178-290 80-187 (616)
85 2c42_A Pyruvate-ferredoxin oxi 63.1 36 0.0012 38.7 11.2 109 175-297 66-178 (1231)
86 2vk8_A Pyruvate decarboxylase 60.0 19 0.00065 36.8 7.7 105 177-290 56-169 (563)
87 2vbf_A Branched-chain alpha-ke 55.6 38 0.0013 34.6 9.1 104 177-290 77-189 (570)
88 1ovm_A Indole-3-pyruvate decar 51.2 26 0.00089 35.6 6.9 47 177-230 57-103 (552)
89 2zzd_B Thiocyanate hydrolase s 48.9 24 0.00081 30.5 5.2 32 321-352 113-144 (157)
90 3hww_A 2-succinyl-5-enolpyruvy 47.4 84 0.0029 31.9 10.1 102 178-290 61-170 (556)
91 3ibs_A Conserved hypothetical 32.0 58 0.002 28.0 5.2 36 192-227 111-146 (218)
92 4hhu_A OR280; engineered prote 31.5 2.2E+02 0.0074 23.4 8.2 90 194-283 4-114 (170)
93 2jgd_A 2-oxoglutarate dehydrog 31.3 99 0.0034 34.0 7.8 102 175-286 664-775 (933)
94 2khz_A C-MYC-responsive protei 30.7 46 0.0016 28.4 4.2 35 193-230 79-113 (165)
95 1use_A VAsp, vasodilator-stimu 27.8 84 0.0029 21.3 4.1 22 336-357 6-27 (45)
96 3hyn_A Putative signal transdu 25.9 44 0.0015 29.7 3.1 36 193-229 81-118 (189)
97 3ehd_A Uncharacterized conserv 24.0 63 0.0021 27.8 3.8 37 193-231 71-108 (162)
98 2x5n_A SPRPN10, 26S proteasome 23.6 79 0.0027 27.5 4.5 33 194-226 109-141 (192)
99 1m3s_A Hypothetical protein YC 23.1 1.4E+02 0.0049 24.9 6.0 40 189-230 77-116 (186)
100 2kl8_A OR15; structural genomi 22.7 97 0.0033 22.7 3.9 27 257-283 5-32 (85)
101 2yic_A 2-oxoglutarate decarbox 22.1 2.2E+02 0.0074 31.0 8.4 103 175-287 596-708 (868)
102 4fyk_A Deoxyribonucleoside 5'- 21.2 97 0.0033 26.4 4.4 34 193-229 70-103 (152)
103 1n3y_A Integrin alpha-X; alpha 20.8 1.3E+02 0.0043 25.3 5.2 35 192-226 110-146 (198)
104 3hbm_A UDP-sugar hydrolase; PS 20.4 2.3E+02 0.0079 26.1 7.3 34 196-230 3-38 (282)
105 3hht_B NitrIle hydratase beta 20.3 1.7E+02 0.0058 26.6 6.0 26 321-346 77-102 (229)
No 1
>2ozl_A PDHE1-A type I, pyruvate dehydrogenase E1 component alpha subunit, somatic form; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.11 PDB: 1ni4_A* 3exe_A* 3exi_A 3exh_A* 3exg_A 3exf_A*
Probab=100.00 E-value=9e-81 Score=623.58 Aligned_cols=349 Identities=53% Similarity=0.917 Sum_probs=329.8
Q ss_pred CCceeeeCCCCccceecCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccC
Q 016175 34 TTPLTIETSVPFTSHQCEA-PSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT 112 (394)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~-p~~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~ 112 (394)
.++.||+++ ||++|+++. |+..+.+|+++++++|+.|+++|+||+++..++++|+|.||+|++.|||++++|+..+|+
T Consensus 6 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~e~l~~~yr~M~~~R~~e~~~~~l~~~g~i~gf~~~~~GqEa~~vg~~~al~ 84 (365)
T 2ozl_A 6 ANDATFEIK-KCDLHRLEEGPPVTTVLTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGIN 84 (365)
T ss_dssp CSEEEEECC-CCEEESCSCCSCSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCCCCCTTCHHHHHHHHHTSC
T ss_pred ccccccccC-ccccccCCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCChHHHHHHHHHhhC
Confidence 345788876 999999986 777788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeecCCcchhhHhhcCCCHHHHHHHHhCCCCCCCCCCCCccCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCCC
Q 016175 113 KKDSIITAYRDHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDE 192 (394)
Q Consensus 113 ~~D~~~~~yRd~~~~lsrG~~~~~vlael~g~~~~~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~ 192 (394)
++|+++++||+|++++.+|.++..+|+|++|+.++++.|++|+||++++ ++++++|+||+++|+|+|+|+|.++++.+
T Consensus 85 ~~D~i~~~yR~~~~~~~~G~~~~~i~~e~~g~~~g~~~g~gg~~H~~~~--~~~~~~g~~G~~lp~A~G~A~A~~~~~~~ 162 (365)
T 2ozl_A 85 PTDHLITAYRAHGFTFTRGLSVREILAELTGRKGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPLGAGIALACKYNGKD 162 (365)
T ss_dssp TTSEEECCSCCHHHHHHTTCCHHHHHHHHTTCTTSTTTTSSCTTCCCBT--TBCCCCCSTTTHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEehHHHHHHHHHhcCCCHHHHHHHHcCCCCCCCCCCCCCCCcCcc--ccCCCcchhhhhhHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999764 88999999999999999999999999999
Q ss_pred CeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCccccccccccccCcchhhhcCcccEEEEeCCCHHHHHHHHH
Q 016175 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACK 272 (394)
Q Consensus 193 ~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~~~~~g~~~~~~~VDG~D~~av~~a~~ 272 (394)
++|||++|||++++|.+||+||+|+.|+||+||||+||+|+|+++..+....++|++++..+|+++|||||+++|++|++
T Consensus 163 ~~vv~~~GDGa~~~G~~~Ealn~A~~~~lpvi~vv~NN~~g~~t~~~~~~~~~~~~~ra~g~p~~~VdG~D~~av~~a~~ 242 (365)
T 2ozl_A 163 EVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFIPGLRVDGMDILCVREATR 242 (365)
T ss_dssp CCEEEEEETTGGGCHHHHHHHHHHHHTTCCEEEEEEECSEETTEEHHHHCSCCCGGGTTTTSCEEEEETTCHHHHHHHHH
T ss_pred ceEEEEECchhhhccHHHHHHHHHHHHCcCEEEEEECCCcccCCCcccccCCCCHHHHhCCCCEEEEeCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999877766667888887569999999999999999999
Q ss_pred HHHHHHhh-CCCEEEEEEeeecCCCCCCCCCCCCCCchhhhhhhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 016175 273 FAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVD 351 (394)
Q Consensus 273 ~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~ 351 (394)
+|++++|+ +||+|||+.|||++|||++||+.+||+++|++.|++.+|||.+|+++|+++|++|++++++|+++++++|+
T Consensus 243 ~A~~~~r~~~gP~lIe~~t~R~~gHs~~D~~~~Yr~~~e~~~~~~~~dpi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~ 322 (365)
T 2ozl_A 243 FAAAYCRSGKGPILMELQTYRYHGHEMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIE 322 (365)
T ss_dssp HHHHHHHTTCCCEEEEEECCCSSCSSTTCCSCSSSCHHHHHHHHHHHCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEeecCCCCCCCCCCcccCCHHHHHHHHhCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999998 99999999999999999999988899999999998668999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccccccccccCCCCcccccCc
Q 016175 352 DAIAKAKESPMPEPSELFTNVYVKGYGVEVFGAD 385 (394)
Q Consensus 352 ~a~~~A~~~~~p~~~~~~~~vy~~~~~~~~~~~~ 385 (394)
+++++|+++|.|+++++|++||++.++..++++.
T Consensus 323 ~a~~~a~~~p~p~~~~~~~~vy~~~~~~~~~~~~ 356 (365)
T 2ozl_A 323 DAAQFATADPEPPLEELGYHIYSSDPPFEVRGAN 356 (365)
T ss_dssp HHHHHHHHSCCCCGGGTTCSSSSSCCCEEEECSB
T ss_pred HHHHHHHhCCCCCHHHHHhhhcCCCChhhhcccc
Confidence 9999999999999999999999987776667664
No 2
>1qs0_A 2-oxoisovalerate dehydrogenase alpha-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.11 PDB: 2bp7_A
Probab=100.00 E-value=3.9e-73 Score=575.44 Aligned_cols=320 Identities=27% Similarity=0.407 Sum_probs=305.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeecCCcchhhHhhcCCCHH
Q 016175 56 SVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTLL 135 (394)
Q Consensus 56 ~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~~yRd~~~~lsrG~~~~ 135 (394)
.+.+|+++++++|+.|+++|.||+++..++++|+| +|+|++.||||+++|+..+|+++|+++++||+|++.|++|.++.
T Consensus 68 ~~~~~~e~~~~~y~~M~~~R~fe~~~~~~~~qgr~-~~~~~~~GqEA~~vg~~~al~~~D~v~~~yR~~~~~l~~g~~~~ 146 (407)
T 1qs0_A 68 AEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKM-SFYMQSLGEEAIGSGQALALNRTDMCFPTYRQQSILMARDVSLV 146 (407)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SCCCCCTTTHHHHHHHHHHSCTTSEEECCSSCHHHHHHTTCCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-ccCcCCCChHHHHHHHHHhcCCCCEEEecccchHHHHhcCCCHH
Confidence 36899999999999999999999999999999999 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCccCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHH
Q 016175 136 EVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNI 215 (394)
Q Consensus 136 ~vlael~g~~~~~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~ 215 (394)
++|++++|+..+.++|+++++|++..+.++++++|+||+++|+|+|+|+|.++++++++|||++|||++++|.+||+||+
T Consensus 147 ~i~~el~g~~~~~~~G~g~~~h~~~~~~~~~~~~g~lG~~lp~AvGaA~A~k~~~~~~~vv~i~GDGa~~~G~~~Eal~~ 226 (407)
T 1qs0_A 147 EMICQLLSNERDPLKGRQLPIMYSVREAGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTF 226 (407)
T ss_dssp HHHHHHHTCTTCTTTTCSCTTCCCBGGGTBCCCCSSSSHHHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCCceeecchhccCccccccccccchhHHHHHHHHHHHhCCCCEEEEEECCchhhcChHHHHHHH
Confidence 99999999999888999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCCeEEEEEcCCccccccccccc-cCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEee
Q 016175 216 AALWDLPAILVCENNHYGMGTAEWRAA-KSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (394)
Q Consensus 216 Aa~~~LpvI~vv~NN~~~i~~~~~~~~-~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (394)
|+.|+||+||||+||+|+|+++..... ..+++++++ +| +++++|||+|+++|++|+++|++++|+ +||+|||+.||
T Consensus 227 A~~~~lpvi~Vv~NN~~gi~~~~~~~~~~~~d~a~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~gP~lIe~~t~ 306 (407)
T 1qs0_A 227 AHVYRAPVILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERARRGLGPSLIEWVTY 306 (407)
T ss_dssp HHHHTCCEEEEEEECSEETTEEGGGGTTTTCCSTHHHHHTTCEEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECC
T ss_pred HHHHCcCEEEEEECCCcceeeccccccCCCCCHHHHHHHcCCeEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 999999999999999999998877665 456888877 55 999999999999999999999999998 99999999999
Q ss_pred ecCCCCCCCCCCCCCCchhhhhhhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHc------CCCCCc
Q 016175 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKE------SPMPEP 365 (394)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~a~~~A~~------~~~p~~ 365 (394)
|++|||++|+++.||+++|++.|+ ++|||.+|+++|+++|+||++++++|+++++++|++++++|++ +|.|++
T Consensus 307 R~~Ghs~~Dd~~~Yr~~~e~~~~~-~~DPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~~~~~p~p~~ 385 (407)
T 1qs0_A 307 RAGPHSTSDDPSKYRPADDWSHFP-LGDPIARLKQHLIKIGHWSEEEHQATTAEFEAAVIAAQKEAEQYGTLANGHIPSA 385 (407)
T ss_dssp CCSCSSTTCCGGGTSCTTHHHHCT-TCCHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCCCCS
T ss_pred ccCCcCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCH
Confidence 999999999888899999999997 5999999999999999999999999999999999999999998 589999
Q ss_pred cccccccccCCC
Q 016175 366 SELFTNVYVKGY 377 (394)
Q Consensus 366 ~~~~~~vy~~~~ 377 (394)
+++|+|||++.+
T Consensus 386 ~~~~~~vy~~~~ 397 (407)
T 1qs0_A 386 ASMFEDVYKEMP 397 (407)
T ss_dssp SGGGSSSSSSCC
T ss_pred HHHHhhccCCCC
Confidence 999999999754
No 3
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=100.00 E-value=2.7e-71 Score=555.92 Aligned_cols=312 Identities=29% Similarity=0.464 Sum_probs=290.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeecCCcchhhHhhcCCCH
Q 016175 55 RSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTL 134 (394)
Q Consensus 55 ~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~~yRd~~~~lsrG~~~ 134 (394)
..+.+|+++++++|+.|+++|.||+++..++++|+| ||+|++.|||++++|+..+|+++|+++++||+|++.+.+|.++
T Consensus 37 ~~~~l~~e~l~~~y~~M~~~R~fe~~~~~~~~qgr~-g~~~~~~G~Ea~~vg~~~~l~~~D~v~~~~R~~~~~~~~G~~~ 115 (368)
T 1w85_A 37 AMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRL-GFYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPL 115 (368)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCCTTCHHHHHHHHHTCCTTCEEECCSSCHHHHHHTTCCH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCCHHHHHHHHHHhcCCcCEEEecchhHHHHHhcCCCH
Confidence 345799999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCccCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHH
Q 016175 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (394)
Q Consensus 135 ~~vlael~g~~~~~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn 214 (394)
..+|++++|+.+ |++|| ++.++.+++|+||+++|+|+|+|+|.++++++++|||++|||++++|.+||+||
T Consensus 116 ~~~~~el~G~~~------G~~~h---~~~~~~~~~g~lG~~lp~AvG~A~A~~~~~~~~~vv~i~GDGa~~~G~~~Eal~ 186 (368)
T 1w85_A 116 YQAFLFSRGHFH------GNQIP---EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEGIN 186 (368)
T ss_dssp HHHHHHHHTCGG------GGCCC---TTCCBCCCCCSTTHHHHHHHHHHHHHHHTTCSCCEEEEEETGGGGSHHHHHHHH
T ss_pred HHHHHHHCCCCC------CCCCC---cccccCCCccccCccccHHHHHHHHhHhhCCCCeEEEEEchhhhhhcHHHHHHH
Confidence 999999999866 35677 456889999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCeEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEee
Q 016175 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (394)
Q Consensus 215 ~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (394)
+|+.|+||+||||+||+|+|+++.....+.+++.+++ +| +++++|||+|+.+|++|+++|++++|+ +||+|||+.||
T Consensus 187 ~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~~r~~~gP~lIe~~t~ 266 (368)
T 1w85_A 187 FAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCF 266 (368)
T ss_dssp HHHHTTCCEEEEEEECSEETTEEGGGTCSCSCSGGGGGGTTCCEEEEETTCHHHHHHHHHHHHHHHHTTSCCEEEEEECC
T ss_pred HHHHHCcCEEEEEEcCCccceeccccccCCCCHHHHHHHCCCCEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 9999999999999999999998877777667888887 56 999999999999999999999999998 89999999999
Q ss_pred ecCCCC-CCCCCCCCCCchhhhhhhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccc
Q 016175 292 RYHGHS-MSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSELFT 370 (394)
Q Consensus 292 R~~GHs-~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~a~~~A~~~~~p~~~~~~~ 370 (394)
|++||| ++|+++.||+++|++.|+ ++|||.+|+++|+++|++|++++++|+++++++|++++++|+++|.|+++++|+
T Consensus 267 r~~gHs~~~Ddp~~yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~p~p~~~~~~~ 345 (368)
T 1w85_A 267 RYGPHTMSGDDPTRYRSKELENEWA-KKDPLVRFRKFLEAKGLWSEEEENNVIEQAKEEIKEAIKKADETPKQKVTDLIS 345 (368)
T ss_dssp CSSCSCSSCC------CHHHHHHHH-TTCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCCHHHHHH
T ss_pred ccCCCCCCCCCccccCCHHHHHHHh-cCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHh
Confidence 999999 999888899999999998 599999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCC
Q 016175 371 NVYVKGY 377 (394)
Q Consensus 371 ~vy~~~~ 377 (394)
+||++.+
T Consensus 346 ~vy~~~~ 352 (368)
T 1w85_A 346 IMFEELP 352 (368)
T ss_dssp TSCSSCC
T ss_pred hccCCCC
Confidence 9999755
No 4
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=100.00 E-value=1.9e-70 Score=555.26 Aligned_cols=323 Identities=26% Similarity=0.433 Sum_probs=288.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeecCCcchhhHhhcCCCH
Q 016175 55 RSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGTL 134 (394)
Q Consensus 55 ~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~~yRd~~~~lsrG~~~ 134 (394)
..+.+|+++++++|+.|+++|.||+++..++++|+| +|+|++.|||++++|+..+|+++|+++++||+|++++.+|.++
T Consensus 48 ~~~~~~~e~~~~~y~~M~~~r~fe~~~~~~~~~gri-~~~~~~~GqEa~~vg~~~al~~~D~v~~~yR~~~~~~~~G~~~ 126 (400)
T 2bfd_A 48 EDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRI-SFYMTNYGEEGTHVGSAAALDNTDLVFGQAREAGVLMYRDYPL 126 (400)
T ss_dssp GCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-SCCCCCTTCHHHHHHHHHTSCTTSEEECCSCCHHHHHHTTCCH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ceeecCCChHHHHHHHHHhcCCCCEEEecCcCHHHHHHcCCCH
Confidence 346899999999999999999999999999999999 6999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCccCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHH
Q 016175 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (394)
Q Consensus 135 ~~vlael~g~~~~~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn 214 (394)
.++|++++|+.+++++|+++++|++.++.++.+++|+||+++|+|+|+|+|.++++.+++|||++|||++++|.+||+||
T Consensus 127 ~~~l~e~~g~~~g~~~G~~~~~H~~~~~~~~~~~~g~lG~~lp~AvG~AlA~~~~~~~~~vv~~~GDGa~~~G~~~Eal~ 206 (400)
T 2bfd_A 127 ELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFN 206 (400)
T ss_dssp HHHHHHHHTCTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTHHHHHHHHHHHHHHHTCCCCEEEEEETTGGGSHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCCcCCcccccCccccCccccccccHHHHHHHhhhhhCCCCeEEEEECchhhhcChHHHHHH
Confidence 99999999999999999999999998778889999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCeEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEee
Q 016175 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (394)
Q Consensus 215 ~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (394)
+|+.|+||+||||+||+|+|+++.......+++.+++ +| +++++|||+|+++|++|+++|++++|+ ++|+|||+.||
T Consensus 207 ~A~~~~lpvi~vv~NN~~~i~~~~~~~~~~~d~~~~a~a~G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~~ty 286 (400)
T 2bfd_A 207 FAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTY 286 (400)
T ss_dssp HHHHTTCCEEEEEEECSEETTEEGGGTCSSSTTGGGTGGGTCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHHHCcCEEEEEECCceeeeecccccCCCCCHHHHHHHcCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEee
Confidence 9999999999999999999999887777767888887 56 999999999999999999999999998 99999999999
Q ss_pred ecCCCCCCCCCCCCCCchhhhhhhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccccc
Q 016175 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSELFTN 371 (394)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~a~~~A~~~~~p~~~~~~~~ 371 (394)
|.+|||++|+++.||+++|++.|+...|||.+++++|++.|+++++++++|+++++++|++++++|++.|.|+++++|++
T Consensus 287 R~~gHs~~D~~~~Yr~~~e~~~~~~~~dPl~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~ 366 (400)
T 2bfd_A 287 RIGHASTSDDSSAFRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSD 366 (400)
T ss_dssp CCC--CC-------------------CCHHHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHSCBCCGGGGSTT
T ss_pred eeCCCCCCCCCccCCCHHHHHHHHhcCCHHHHHHHHHHHCCCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 99999999988889999999999855689999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCC
Q 016175 372 VYVKGYG 378 (394)
Q Consensus 372 vy~~~~~ 378 (394)
||++.++
T Consensus 367 vy~~~~~ 373 (400)
T 2bfd_A 367 VYQEMPA 373 (400)
T ss_dssp SSSSCCH
T ss_pred hhccCCH
Confidence 9997654
No 5
>1umd_A E1-alpha, 2-OXO acid dehydrogenase alpha subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.11 PDB: 1um9_A* 1umc_A* 1umb_A*
Probab=100.00 E-value=1.8e-67 Score=528.43 Aligned_cols=320 Identities=28% Similarity=0.476 Sum_probs=305.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCC-CeeecCCcchhhHhhcCCCH
Q 016175 56 SVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKK-DSIITAYRDHCTFLGRGGTL 134 (394)
Q Consensus 56 ~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~-D~~~~~yRd~~~~lsrG~~~ 134 (394)
...+|+++++++|+.|+++|.||+++..++++|++ ||+|++.|||++++++..+|+++ |+++++||+|++.+.+|.++
T Consensus 30 ~~~l~~~~l~~l~~~m~~~R~~~~~~~~~~~~G~~-g~~~~~~G~ea~~~~~~~~l~~~rD~i~~s~r~~~~~~~~G~~~ 108 (367)
T 1umd_A 30 PLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKT-SFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPL 108 (367)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-SCCCCCTTCHHHHHHHHHHSCTTTSEEECCTTTHHHHHHHTCCH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc-cCCCCCcCHHHHHHHHHHHcCCCCcEEEeCcHHHHHHHHcCCCH
Confidence 46799999999999999999999999999999999 99999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCccCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHH
Q 016175 135 LEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALN 214 (394)
Q Consensus 135 ~~vlael~g~~~~~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn 214 (394)
.++|++++|+.++++.|+++++|++.++.++.+++|++|+++|+|+|+|+|.|+.+++++|||++|||++++|.+|||||
T Consensus 109 ~~~l~~~~g~~~g~~~G~~~~~h~~~~~~~~~~~~g~lG~~l~~a~G~A~a~k~~~~~~~vv~i~GDGa~~~G~~~Eal~ 188 (367)
T 1umd_A 109 KELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGIN 188 (367)
T ss_dssp HHHHHHHHTBTTCTTTTCSCSSCCCBTTTTBCCCCSSTTTTHHHHHHHHHHHHHTTCCCCEEEEEETGGGGSHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCCCCCCCcccccCcCCCCchhhhhhhHHHHHHHHHHHhCCCCeEEEEEcccccccCcHHHHHH
Confidence 99999999999999999999999988888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCeEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEee
Q 016175 215 IAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTY 291 (394)
Q Consensus 215 ~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~ 291 (394)
+|+.|+||+||||+||+|+|+++.......+++..++ +| +++++|||+|+.+|++|++.|++++++ +||+|||+.||
T Consensus 189 ~A~~~~lpvi~vv~NN~~gi~~~~~~~~~~~d~~~~a~a~G~~~~~Vdg~d~~av~~a~~~A~~~a~~~~gP~lIe~~t~ 268 (367)
T 1umd_A 189 FAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVY 268 (367)
T ss_dssp HHHHTTCSEEEEEEECSEETTEEHHHHCSSSCSGGGGGGTTSCEEEEETTCHHHHHHHHHHHHHHHHTTCCCEEEEEECC
T ss_pred HHHHhCcCEEEEEecCCeeeccChhhccCCCCHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEee
Confidence 9999999999999999999998877666667888887 55 999999999999999999999999988 89999999999
Q ss_pred ecCCCCCCCCCCCCCCchhhhhhhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccccc
Q 016175 292 RYHGHSMSDPGSTYRTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKESPMPEPSELFTN 371 (394)
Q Consensus 292 R~~GHs~~D~~~~YR~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~a~~~A~~~~~p~~~~~~~~ 371 (394)
|++|||++|+++.||+++|++.|+ ++|||.+|+++|+++|++|++++++|+++++++|++++++|+++|.|+++++|++
T Consensus 269 r~~Ghs~~D~~~~Yr~~~e~~~~~-~~dPi~~~~~~L~~~g~~~~~~~~~i~~~~~~~v~~a~~~a~~~~~p~~~~~~~~ 347 (367)
T 1umd_A 269 RYGPHSSADDDSRYRPKEEVAFWR-KKDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFED 347 (367)
T ss_dssp CCSCSSTTCCGGGTSCHHHHHHHH-TTCHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCBCCGGGGGTT
T ss_pred cCCCCCCCCCccccCCHHHHHHHH-cCCHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHhh
Confidence 999999999888899999999997 5999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC
Q 016175 372 VYVKGY 377 (394)
Q Consensus 372 vy~~~~ 377 (394)
||++.+
T Consensus 348 vy~~~~ 353 (367)
T 1umd_A 348 VFAEKP 353 (367)
T ss_dssp SSSSCC
T ss_pred hcCCCC
Confidence 999755
No 6
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=3.5e-58 Score=501.72 Aligned_cols=320 Identities=21% Similarity=0.253 Sum_probs=274.3
Q ss_pred CCCceeeeCCC-------CccceecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHH
Q 016175 33 DTTPLTIETSV-------PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAI 105 (394)
Q Consensus 33 ~~~~~~~~~~~-------~~~~~~~~~p~~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~v 105 (394)
.|.++-+|..- +|..+++|.+. ..+|+++++++|+.|+++|.||+++..+|+++++.|+ .|||++++
T Consensus 84 yc~~ig~e~~~i~~~~~~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~R~fE~~l~~~~~~~k~~g~----~G~Ea~~~ 157 (868)
T 2yic_A 84 YCRHVGVEYTHILEPEQQRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIP 157 (868)
T ss_dssp HSSSEEEECTTCSCHHHHHHHHHHHSSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHH
T ss_pred hcCCCCcceeccCChHHhHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHH
Confidence 57777777431 38888888754 7899999999999999999999999999998876443 89999999
Q ss_pred HHHhccC------CCCeeec-CCcchhhHhh--cCCCHHHHHHHHhCCCCCC-CCCCC-CccCccCCC------------
Q 016175 106 GMEAGIT------KKDSIIT-AYRDHCTFLG--RGGTLLEVFSELMGRKDGC-SHGKG-GSMHFYKKD------------ 162 (394)
Q Consensus 106 g~~~aL~------~~D~~~~-~yRd~~~~ls--rG~~~~~vlael~g~~~~~-~~G~g-gs~H~~~~~------------ 162 (394)
|+..+|+ .+|++++ +||+|+++|+ +|+++.++|+|++|+.+++ +.|.+ .++|++...
T Consensus 158 g~~~~l~~~~~l~~~D~v~gm~hRg~~~~Lan~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~ 237 (868)
T 2yic_A 158 MMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIE 237 (868)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHTTTCC------------CGGGTCCEEEEEECSSSSCEEE
T ss_pred HHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCccee
Confidence 9987754 7999997 8999999999 9999999999999998876 44433 468986432
Q ss_pred CCccCCcCCccchhhHHHHHHHHhhhCC----------CCCeEEEEEcccc-cccchHHHHHHHHHHCCCC---eEEEEE
Q 016175 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGA-ANQGQLFEALNIAALWDLP---AILVCE 228 (394)
Q Consensus 163 ~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~l~GDGa-~~eG~~~Ealn~Aa~~~Lp---vI~vv~ 228 (394)
.++.+++|+||+++|+|+|+|+|.|+++ .+.++||++|||+ ++||.+|||||+|+.|+|| +||||+
T Consensus 238 l~l~~n~s~Lg~~~P~A~G~A~A~k~~~~~~~~~~~~~~~~~vv~~~GDGa~~~eG~v~Ealn~A~~~~lp~g~vi~iv~ 317 (868)
T 2yic_A 238 VSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVV 317 (868)
T ss_dssp EEECCCCSSTTTTHHHHHHHHHHHHHHHTCSTTSSSCSCCEEEEEEEEHHHHHHCHHHHHHHTTTTCTTTCCSCCEEEEE
T ss_pred eeecCCCccccccccHHHHHHHHHHhhccCCcccccccCCceEEEEECCcccccccHHHHHHHHHHhcCCCCCCeEEEEE
Confidence 2345678999999999999999999864 5679999999999 5999999999999999999 999999
Q ss_pred cCCccccccccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEeeecCCCCCCCCCCCC
Q 016175 229 NNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTY 305 (394)
Q Consensus 229 NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~Y 305 (394)
||+|+|+++.....+.+++.+++ +| +|+++|||+|+++|++|+++|++++|+ ++|+|||+.|||++|||++|+++ |
T Consensus 318 NN~~g~st~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~ar~~~~PvlIe~~tyR~~GHs~~D~p~-~ 396 (868)
T 2yic_A 318 NNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-M 396 (868)
T ss_dssp ECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-G
T ss_pred cCCcccccCccccccccCHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEEEeecCCCcCcccccc-c
Confidence 99999999765544445566666 55 999999999999999999999999998 99999999999999999999986 8
Q ss_pred CCchhhhhhhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHc
Q 016175 306 RTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKE 359 (394)
Q Consensus 306 R~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~a~~~A~~ 359 (394)
|.++|++.|+.++||+.+|+++|+++|++|++++++++++++++|++++++|++
T Consensus 397 ~~p~~~~~~~~~~dPi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~ 450 (868)
T 2yic_A 397 TQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVRE 450 (868)
T ss_dssp TCHHHHHHHTTCCCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHhCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999878999999999999999999999999999999999999999987
No 7
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.9e-57 Score=505.14 Aligned_cols=321 Identities=21% Similarity=0.249 Sum_probs=273.5
Q ss_pred CCCceeeeCCC-------CccceecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHH
Q 016175 33 DTTPLTIETSV-------PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAI 105 (394)
Q Consensus 33 ~~~~~~~~~~~-------~~~~~~~~~p~~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~v 105 (394)
+|.++-+|..- +|..+++|.+. ..+|+++++++|+.|+++|.||+++..+|+++++.|+ .|||++++
T Consensus 329 yc~~ig~e~~~i~~~~~~~w~~~~~e~~~--~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~~k~~g~----~GqEa~~~ 402 (1113)
T 2xt6_A 329 YCRHVGVEYTHILEPEQQRWIQERVETKH--DKPTVAEQKYILSKLNAAEAFETFLQTKYVGQKRFSL----EGAETVIP 402 (1113)
T ss_dssp HSSSEEEECTTCSCHHHHHHHHHHHHSCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCGGGCC----TTCTTHHH
T ss_pred ccCCCCcceeccCCHHHhHHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC----CChHHHHH
Confidence 57778777431 37888888654 7899999999999999999999999999998876453 89999999
Q ss_pred HHHhcc------CCCCeeec-CCcchhhHhh--cCCCHHHHHHHHhCCCCCC-CCCCC-CccCccCCC------------
Q 016175 106 GMEAGI------TKKDSIIT-AYRDHCTFLG--RGGTLLEVFSELMGRKDGC-SHGKG-GSMHFYKKD------------ 162 (394)
Q Consensus 106 g~~~aL------~~~D~~~~-~yRd~~~~ls--rG~~~~~vlael~g~~~~~-~~G~g-gs~H~~~~~------------ 162 (394)
|+..+| ..+|++++ +||+|+++|+ +|+++.++|+|++|+.+++ +.|.+ .++|++...
T Consensus 403 g~~~~l~~~~~l~~~D~v~gm~hRg~~~~La~~~G~~~~~i~ae~~G~~~g~~~~g~gdv~~Hlg~~~~~~~~~g~~~v~ 482 (1113)
T 2xt6_A 403 MMDAVIDQCAEHGLDEVVIAMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPSQAHGSGDVKYHLGATGTYIQMFGDNDIE 482 (1113)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTTHHHHHHHTTCCCHHHHSTTC-------------CGGGTCCEEEEEECSSSSCEEE
T ss_pred HHHHHHHHhhhCCCCCEEEeccccchHHHHHHHhCCCHHHHHHHhcCCCCCCccCCCCCccccCCccccccccCCCccee
Confidence 998775 47999997 8999999999 9999999999999998876 44433 468986432
Q ss_pred CCccCCcCCccchhhHHHHHHHHhhhCC----------CCCeEEEEEcccc-cccchHHHHHHHHHHCCCC---eEEEEE
Q 016175 163 SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGA-ANQGQLFEALNIAALWDLP---AILVCE 228 (394)
Q Consensus 163 ~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~l~GDGa-~~eG~~~Ealn~Aa~~~Lp---vI~vv~ 228 (394)
.++.+++|+||+++|+|+|+|+|.|+++ .+.++||++|||+ ++||.+|||||+|++|+|| +||||+
T Consensus 483 l~l~~n~s~Lg~~~p~A~G~A~A~k~~~~~~~~~~~~~~~~~~v~~~GDGa~~~eG~~~Ealn~A~~~~lp~g~vi~iv~ 562 (1113)
T 2xt6_A 483 VSLTANPSHLEAVDPVLEGLVRAKQDLLDTGEEGSDNRFSVVPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTIHIVV 562 (1113)
T ss_dssp EEECCCCSSTTTTHHHHHHHHHHHHHHTTBSTTSSBSCCCEEEEEEEEHHHHHHCTHHHHHHTTTTCTTTCCSCCEEEEE
T ss_pred eeecCCCccccccccHHHHHHHHHHHhccccCccccccCCcEEEEEECCcccccccHHHHHHHHHhhcCCCCCCeEEEEE
Confidence 2345678999999999999999999865 5689999999999 5999999999999999999 999999
Q ss_pred cCCccccccccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEeeecCCCCCCCCCCCC
Q 016175 229 NNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTY 305 (394)
Q Consensus 229 NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~Y 305 (394)
||+|+|+++.....+.+.+.+++ +| +|+++|||+|+++|++|+++|++++|+ ++|+|||+.|||++|||++|+++ |
T Consensus 563 NN~~gist~~~~~~s~~~~~~~a~a~G~p~~~VdG~D~~av~~a~~~A~~~~r~~~~PvlIe~~tyR~~GHs~~D~p~-~ 641 (1113)
T 2xt6_A 563 NNQIGFTTAPTDSRSSEYCTDVAKMIGAPIFHVNGDDPEACAWVARLAVDFRQAFKKDVVIDMLCYRRRGHNEGDDPS-M 641 (1113)
T ss_dssp ECSCBTTBCHHHHCSSSSTTGGGGGGTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCSCSSTTCCGG-G
T ss_pred eCCcccccCccccccccCHHHHHHhcCCcEEEEcCCCHHHHHHHHHHHHHHHHhcCCCEEEEEEeEccCCcCCCCccc-c
Confidence 99999999765444444455566 55 999999999999999999999999998 99999999999999999999986 8
Q ss_pred CCchhhhhhhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHcC
Q 016175 306 RTRDEISGVRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKES 360 (394)
Q Consensus 306 R~~~e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~a~~~A~~~ 360 (394)
|.++|++.|++.+||+.+|+++|+++|++|++++++++++++++|++++++|++.
T Consensus 642 ~~~~~~~~~~~~~dpi~~~~~~L~~~G~~t~ee~~~i~~e~~~~v~~a~~~a~~~ 696 (1113)
T 2xt6_A 642 TQPYMYDVIDTKRGSRKAYTEALIGRGDISMKEAEDALRDYQGQLERVFNEVREL 696 (1113)
T ss_dssp TCHHHHHHHTTCCCHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888998888779999999999999999999999999999999999999999873
No 8
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=1e-55 Score=484.84 Aligned_cols=320 Identities=17% Similarity=0.205 Sum_probs=256.5
Q ss_pred CCCceeeeCCC-------CccceecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHH
Q 016175 33 DTTPLTIETSV-------PFTSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAI 105 (394)
Q Consensus 33 ~~~~~~~~~~~-------~~~~~~~~~p~~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~v 105 (394)
.|.++-+|..- .|...++|.+ .+.+|+++++++|+.|+++|.||+++..+|++|+.-| +.|||++.+
T Consensus 164 yc~~ig~e~~~i~~~~~~~w~~~~~e~~--~~~~s~e~~~~~y~~m~~~r~fE~~l~~~~~~gkrf~----~~G~Ea~i~ 237 (933)
T 2jgd_A 164 YCGPIGAEYMHITSTEEKRWIQQRIESG--RATFNSEEKKRFLSELTAAEGLERYLGAKFPGAKRFS----LEGGDALIP 237 (933)
T ss_dssp HHSSEEEECSSCCCHHHHHHHHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCC----CTTCTTHHH
T ss_pred ccCCCcceeeecCCHHHhHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----CCCchHHHH
Confidence 45566666321 1556666644 5689999999999999999999999999999987312 489999999
Q ss_pred HHHhccC------CCCeeec-CCcchhhHhh--cCCCHHHHHHHHhCCCCCCCCCCCCccCccCCCC----------Ccc
Q 016175 106 GMEAGIT------KKDSIIT-AYRDHCTFLG--RGGTLLEVFSELMGRKDGCSHGKGGSMHFYKKDS----------GFY 166 (394)
Q Consensus 106 g~~~aL~------~~D~~~~-~yRd~~~~ls--rG~~~~~vlael~g~~~~~~~G~ggs~H~~~~~~----------~~~ 166 (394)
|+..+++ .+|++++ +||+|+++|+ +|+++.++|+|++|+.++++.|++.++|++.... ++.
T Consensus 238 g~~~~~~~a~~~g~~D~v~g~~hRg~~~~Lan~~G~~~~~i~~e~~G~~~g~~g~gdv~~Hlg~~~~~~~~gg~~~l~l~ 317 (933)
T 2jgd_A 238 MLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQDLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALA 317 (933)
T ss_dssp HHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHTTCCCHHHHHHHHHTCC--CCSCCCCGGGCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHhhCCCCCEEecCCCcCHHHHHHHHhCCCHHHHHHHhcCCCCCCCCCCCccccCCcccccccCCCceEEeec
Confidence 9777765 6899995 9999999999 9999999999999998887766667889874332 134
Q ss_pred CCcCCccchhhHHHHHHHHhhhCC-----CCCeEEEEEccccc-ccchHHHHHHHHHHCCCC---eEEEEEcCCccccc-
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSK-----DETVTFALYGDGAA-NQGQLFEALNIAALWDLP---AILVCENNHYGMGT- 236 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~-----~~~~vv~l~GDGa~-~eG~~~Ealn~Aa~~~Lp---vI~vv~NN~~~i~~- 236 (394)
.++|++|+++|+|+|+|+|.++++ .+.++||++|||++ +||.+|||||+|+.|+|| +||||+||+|+|++
T Consensus 318 ~~~shlg~~~p~A~G~A~A~~~~~~~~~~~~~~vv~v~GDGa~a~qG~~~Ealn~A~~~~lp~gg~I~vv~nN~~~ist~ 397 (933)
T 2jgd_A 318 FNPSHLEIVSPVVIGSVRARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQVGFTTS 397 (933)
T ss_dssp CCCSSTTCHHHHHHHHHHHHHTTSSSCCGGGEEEEEEEEHHHHHHCTHHHHHHHHTTSTTTCCSCCEEEEEECC------
T ss_pred ccCcccccccCHHHHHHHHHHhhccccCCCCeEEEEEECCcccccCCHHHHHHHHhhccCCCCCceEEEEEeCCccccCC
Confidence 678999999999999999999884 67899999999997 999999999999999999 99999999999999
Q ss_pred cccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEeeecCCCCCCCCCCCCCCchhhhh
Q 016175 237 AEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEISG 313 (394)
Q Consensus 237 ~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs~~D~~~~YR~~~e~~~ 313 (394)
+...+...+.+.+++ .| +|+++|||+|+++|+++++.|++++|. ++|+|||+.|||++||+++|++. ||+++|++.
T Consensus 398 ~~~~~~~~~~~~~~a~a~g~p~~~VdG~D~~av~~a~~~A~e~~r~~~~P~lIe~~tyR~~GH~~~D~~~-yr~~~e~~~ 476 (933)
T 2jgd_A 398 NPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFIDLVCYRRHGHNEADEPS-ATQPLMYQK 476 (933)
T ss_dssp ---------CGGGGGGTTTCCEEEEETTCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC------------CCTTHHH
T ss_pred CHHhcccchhHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHHHHhcCCCEEEEEeeeeecCcCcccchh-hCCHHHHHH
Confidence 777666555666676 56 999999999999999999999999998 99999999999999999999876 999999999
Q ss_pred hhhcCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHc
Q 016175 314 VRQERDPIERIRKLILAHDLATEKELKDIEKEVRKEVDDAIAKAKE 359 (394)
Q Consensus 314 ~~~~~DPi~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~a~~~A~~ 359 (394)
|++.+||+.+|+++|+++|++|++++++++++++++|+++++.|++
T Consensus 477 ~~~~~dPi~~~~~~Li~~Gv~t~~~~~~i~~~~~~~v~~a~~~A~~ 522 (933)
T 2jgd_A 477 IKKHPTPRKIYADKLEQEKVATLEDATEMVNLYRDALDAGDCVVAE 522 (933)
T ss_dssp HHTSCCHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHTSCCCTT
T ss_pred HHccCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9866899999999999999999999999999999999999999877
No 9
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.9e-31 Score=285.77 Aligned_cols=230 Identities=20% Similarity=0.162 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeee------cCCcchhhHhhcCCCH---HHHHHHHh
Q 016175 72 ATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSII------TAYRDHCTFLGRGGTL---LEVFSELM 142 (394)
Q Consensus 72 ~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~------~~yRd~~~~lsrG~~~---~~vlael~ 142 (394)
..+|.+-..+.... +..| .|...+++.+..+|...-+-+ +..||+ ++|++||.- |.++. +.
T Consensus 28 ~~iR~~~~~~v~~a------~sGH--~g~~ls~a~i~~~L~~~~l~~~p~~p~~~~rDr-fvls~GH~s~~lYa~l~-l~ 97 (700)
T 3rim_A 28 DTIRVLAADAVQKV------GNGH--PGTAMSLAPLAYTLFQRTMRHDPSDTHWLGRDR-FVLSAGHSSLTLYIQLY-LG 97 (700)
T ss_dssp HHHHHHHHHHHHHH------TCSC--CHHHHHTHHHHHHHHHTTCCCCTTCTTCTTCCE-EEESSTTCHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHHh------CCCC--CCccHHHHHHHHHHHHHHhCCCCCCCCCCCCCe-EEECCCchhHHHHHHHH-Hh
Confidence 36777766554432 3467 788888888888876432222 136999 999999984 66665 44
Q ss_pred CC----CCCCCCCCCCccCccCCC----CCccCCcCCccchhhHHHHHHHHhhhC-------------CCCCeEEEEEcc
Q 016175 143 GR----KDGCSHGKGGSMHFYKKD----SGFYGGHGIVGAQIPLGCGLAFAQKYS-------------KDETVTFALYGD 201 (394)
Q Consensus 143 g~----~~~~~~G~ggs~H~~~~~----~~~~~~~g~lG~~lp~A~G~A~A~k~~-------------~~~~~vv~l~GD 201 (394)
|. +...+..+.||...++|+ .++..++|+||+++|.|+|+|+|.|+. +.+++|+|++||
T Consensus 98 G~~~~~~~l~~fr~~gs~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~k~~~~~~~~~~~~~~~~~~~~v~~~~GD 177 (700)
T 3rim_A 98 GFGLELSDIESLRTWGSKTPGHPEFRHTPGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASD 177 (700)
T ss_dssp TSSCCHHHHTTTTSTTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTSCTTCSTTCCCEEEEEEH
T ss_pred CCCCCHHHHHHhhcCCCCCCCCCCCCCCCCccccccccCCcchHHHHHHHHHHHHhhhccccccccccCCCCeEEEEECC
Confidence 44 344566666664444443 367789999999999999999999974 567899999999
Q ss_pred cccccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEEE-eCCCHHHHHHHHHHHHHH
Q 016175 202 GAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKV-DGMDALAVKQACKFAKEH 277 (394)
Q Consensus 202 Ga~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~V-DG~D~~av~~a~~~A~~~ 277 (394)
|++++|++|||+|+|+.|+|| +|+||+||+|+|+++..... ..++.++. +| |++++| ||||+.+|++|+++|.+.
T Consensus 178 G~l~eG~~~EAl~~A~~~~L~nli~i~d~N~~si~~~~~~~~-~~~~~~~~~a~G~~~~~V~DG~D~~al~~Al~~A~~~ 256 (700)
T 3rim_A 178 GDIEEGVTSEASSLAAVQQLGNLIVFYDRNQISIEDDTNIAL-CEDTAARYRAYGWHVQEVEGGENVVGIEEAIANAQAV 256 (700)
T ss_dssp HHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHC
T ss_pred cccccChHHHHHHHHHHcCCCcEEEEEECCCcccccchhhcc-chhHHHHHHHcCCeEEEECCCCCHHHHHHHHHHHHHc
Confidence 999999999999999999998 89999999999998877654 44566665 55 899999 999999999999998751
Q ss_pred HhhCCCEEEEEEeeecCCCCCCCCC--CCC--CCchhhhhh
Q 016175 278 ALKNGPMILEMDTYRYHGHSMSDPG--STY--RTRDEISGV 314 (394)
Q Consensus 278 ar~~gP~lIe~~t~R~~GHs~~D~~--~~Y--R~~~e~~~~ 314 (394)
.++|++|+|+|+|++||++.... .++ -+++|++.+
T Consensus 257 --~~~P~lI~~~T~kG~G~~~~e~~~~~Hg~~~~~e~~~~~ 295 (700)
T 3rim_A 257 --TDRPSFIALRTVIGYPAPNLMDTGKAHGAALGDDEVAAV 295 (700)
T ss_dssp --CSSCEEEEEECCTTTTCTTTTTSHHHHHSCCCHHHHHHH
T ss_pred --CCCCEEEEEEEEeeecCCccCCCccccCCCCCHHHHHHH
Confidence 28999999999999999976432 112 345666543
No 10
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=99.97 E-value=3.6e-31 Score=284.00 Aligned_cols=232 Identities=22% Similarity=0.219 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeec------CCcchhhHhhcCCCH---HHHHHH
Q 016175 70 QMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIIT------AYRDHCTFLGRGGTL---LEVFSE 140 (394)
Q Consensus 70 ~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~------~yRd~~~~lsrG~~~---~~vlae 140 (394)
....+|.+...+.... +..| .|....++.+..+|... +.+. ..||+ +++++||.- |.++.
T Consensus 11 ~a~~iR~~~~~~v~~a------~~GH--~g~~l~~~~i~~~L~~~-~~~~~~~p~~~~rDr-~v~s~GH~~~~lYa~~~- 79 (680)
T 1gpu_A 11 AVSTIRILAVDTVSKA------NSGH--PGAPLGMAPAAHVLWSQ-MRMNPTNPDWINRDR-FVLSNGHAVALLYSMLH- 79 (680)
T ss_dssp HHHHHHHHHHHHHHHH------TCSC--CHHHHHHHHHHHHHHHT-CCCCTTCTTCTTCCE-EEESSGGGHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHc------CCCc--cCCchhHHHHHHHHHHh-CCCCccCCCCCCCCE-EEEecchHHHHHHHHHH-
Confidence 3567788776554433 3457 78888888888888865 5553 37998 999999984 66654
Q ss_pred HhCC----CCCCCCCCCCc---cCccCCCCCccCCcCCccchhhHHHHHHHHhhhCC----------CCCeEEEEEcccc
Q 016175 141 LMGR----KDGCSHGKGGS---MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGA 203 (394)
Q Consensus 141 l~g~----~~~~~~G~ggs---~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~l~GDGa 203 (394)
+.|. +...+.++.|+ .|+.....++..++|+||+++|.|+|+|+|.++.+ .+++|||++|||+
T Consensus 80 l~G~~~~~~~l~~~r~~g~~~~ghp~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~vv~i~GDG~ 159 (680)
T 1gpu_A 80 LTGYDLSIEDLKQFRQLGSRTPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGC 159 (680)
T ss_dssp HTTCSCCHHHHTTTTCTTCSCCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHH
T ss_pred HhCCCCCHHHHHhhcccCCCCCCCCCccCCCeeeccccccchHHHHHHHHHHHHHhccccccCccCCCCCeEEEEECCCc
Confidence 4555 22334444444 45543345788899999999999999999998654 3789999999999
Q ss_pred cccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEE-EEeCC-CHHHHHHHHHHHHHHH
Q 016175 204 ANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGL-KVDGM-DALAVKQACKFAKEHA 278 (394)
Q Consensus 204 ~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~-~VDG~-D~~av~~a~~~A~~~a 278 (394)
+++|.+||+||+|+.++|| +|+||+||+|+|+++..... ..++.++. +| |+++ +|||| |+.++++|+++|++.
T Consensus 160 ~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~al~~A~~~- 237 (680)
T 1gpu_A 160 LQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISF-DEDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQAKLS- 237 (680)
T ss_dssp HHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHHTCEEEEESCTTTCHHHHHHHHHHHHHC-
T ss_pred cchhhHHHHHHHHHHhCCCcEEEEEECCCceEeccccccc-CccHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHC-
Confidence 9999999999999999999 89999999999988776554 45677765 55 8898 99999 999999999998861
Q ss_pred hhCCCEEEEEEeeecCCCCCCCCC---CCCCCchhhhhhh
Q 016175 279 LKNGPMILEMDTYRYHGHSMSDPG---STYRTRDEISGVR 315 (394)
Q Consensus 279 r~~gP~lIe~~t~R~~GHs~~D~~---~~YR~~~e~~~~~ 315 (394)
.++|++|+++|+|++||++.|+. ..||+++|+++|+
T Consensus 238 -~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~ 276 (680)
T 1gpu_A 238 -KDKPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLK 276 (680)
T ss_dssp -TTSCEEEEEECCTTTTSTTTTSGGGSSSCCCHHHHHHHH
T ss_pred -CCCCEEEEEEeecccccccCCCCccCCCCCCHHHHHHHH
Confidence 28999999999999999987753 5599999999986
No 11
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=99.97 E-value=7.5e-31 Score=279.12 Aligned_cols=233 Identities=18% Similarity=0.168 Sum_probs=172.6
Q ss_pred cceecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccC-CCCeee--cCCc
Q 016175 46 TSHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT-KKDSII--TAYR 122 (394)
Q Consensus 46 ~~~~~~~p~~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~-~~D~~~--~~yR 122 (394)
.+.+++.|.....++.++|.++++.| |.+...+. .+ ..|++|++.|++.+.+++..+++ +.|+++ ..||
T Consensus 10 ~l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~~~~~--~~---~~Gh~~~~lg~~~~~~~l~~~~~~~~D~~v~~~gH~ 81 (621)
T 2o1s_A 10 TLALVDSTQELRLLPKESLPKLCDEL---RRYLLDSV--SR---SSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQ 81 (621)
T ss_dssp TGGGCSSHHHHTTSCGGGHHHHHHHH---HHHHHHHS--CG---GGCTHHHHHTTHHHHHHHHHHSCTTTSEEEESSSTT
T ss_pred hhhhcCChHHhhhCCHHHHHHHHHHH---HHHHHHHH--hh---cCCCcCCChhHHHHHHHHHhccCCCCCEEEEeCchH
Confidence 36677778777889999999999877 76665433 22 35888889999999999999999 899998 6899
Q ss_pred chhhHhhcCCCHHHHHHHHhCCCCCCCCCCCCc-cCccCCC-CCccCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEc
Q 016175 123 DHCTFLGRGGTLLEVFSELMGRKDGCSHGKGGS-MHFYKKD-SGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYG 200 (394)
Q Consensus 123 d~~~~lsrG~~~~~vlael~g~~~~~~~G~ggs-~H~~~~~-~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~G 200 (394)
++++.+.+|. ..++. + .+..+|. .|+...+ .+...++|++|+++|+|+|+|+|.++++++++|||++|
T Consensus 82 ~y~~~~l~G~-----~~~~~---~--~r~~~g~~g~~~~~~s~~~~~~~G~~G~gl~~A~G~AlA~~~~~~~~~Vv~v~G 151 (621)
T 2o1s_A 82 AYPHKILTGR-----RDKIG---T--IRQKGGLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIG 151 (621)
T ss_dssp CHHHHHTTTT-----GGGGG---G--TTSTTSCCSSCCTTTCTTCCSCCSSSSCHHHHHHHHHHHHHHHTSCCCEEEEEE
T ss_pred HHHHHHHhCC-----Hhhhh---c--ccccCCCCCCCCCCCCCCCccCCcccchHHHHHHHHHHHHHHhCCCCeEEEEEc
Confidence 9999888886 11110 0 1111221 2222101 13344699999999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHCCCCeEEEEEcCCccccccccccccC----------------------------------cc
Q 016175 201 DGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKS----------------------------------PS 246 (394)
Q Consensus 201 DGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~----------------------------------~~ 246 (394)
||++++|.+||+||+|+.|++|+||||+||+|+|+++...+... .+
T Consensus 152 DG~~~~G~~~EaL~~A~~~~~pli~vvnnN~~~i~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~~~~~~r~~~ 231 (621)
T 2o1s_A 152 DGAITAGMAFEAMNHAGDIRPDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSGVPPIKELLKRTEE 231 (621)
T ss_dssp TTGGGSHHHHHHHHHHHHHCCSEEEEEEECC-------------------------------------------------
T ss_pred hhhhhccHHHHHHHHHHhhCCCEEEEEeCCCcccCCCcchHHHHHHhhhcchhHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 99999999999999999999999999999999998765432100 01
Q ss_pred h-------hhhc-Cc-ccEE-EEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecCCCCCC
Q 016175 247 Y-------YKRG-DY-VPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMS 299 (394)
Q Consensus 247 ~-------~~~g-~~-~~~~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~ 299 (394)
+ ..+. ++ ++++ +|||||+.++.+++++|++. ++|++|++.|+|++||+..
T Consensus 232 ~~~~~~~p~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~---~gP~lI~v~t~kg~G~~~~ 291 (621)
T 2o1s_A 232 HIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDL---KGPQFLHIMTKKGRGYEPA 291 (621)
T ss_dssp -------CHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHS---CSEEEEEEECCCTTCCCCC
T ss_pred HhhhccChhhHHHHCCCeEeeeeCCCCHHHHHHHHHHHHHc---CCCEEEEEEEecccCCChh
Confidence 1 1222 23 6777 89999999999999987753 8999999999999999965
No 12
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.97 E-value=2.1e-30 Score=277.80 Aligned_cols=233 Identities=18% Similarity=0.169 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeec------CCcchhhHhhcCCCH---HHHHHH
Q 016175 70 QMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIIT------AYRDHCTFLGRGGTL---LEVFSE 140 (394)
Q Consensus 70 ~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~------~yRd~~~~lsrG~~~---~~vlae 140 (394)
....+|.+-..+.... +..| .|..++++.+..+|...-+.+. ..||+ ++|++||.- |.++.
T Consensus 9 ~a~~iR~~~~~~v~~a------~~GH--~g~~ls~a~~~~~L~~~~l~~~p~~p~~~~rDr-fvls~GH~~~~lYa~l~- 78 (673)
T 1r9j_A 9 VANCIRCLAADIVQGG------KSGH--PGTPMGMAPMSAVLWTEVMKYNSQDPDWVDRDR-FVMSNGHGCALQYALLH- 78 (673)
T ss_dssp HHHHHHHHHHHHHHHH------TCSC--CHHHHHTHHHHHHHHHTTCCCCTTCTTCTTCCE-EEESSGGGHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHc------CCCC--cchhHHHHHHHHHHHHHhhCCCCCCCCCCCCCe-EEEccccHHHHHHHHHH-
Confidence 3556777765544432 3457 7888899988888865433332 56999 999999984 66655
Q ss_pred HhCC----CCCCCCCCCCccCccCCC----CCccCCcCCccchhhHHHHHHHHhhhCC----------CCCeEEEEEccc
Q 016175 141 LMGR----KDGCSHGKGGSMHFYKKD----SGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDG 202 (394)
Q Consensus 141 l~g~----~~~~~~G~ggs~H~~~~~----~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~l~GDG 202 (394)
+.|. +...+.++.||..+++|+ .++..++|+||+++|.|+|+|+|.++.+ .+++|||++|||
T Consensus 79 l~G~~~~~~~l~~~r~~~s~~~ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~g~~~~d~~v~~~~GDG 158 (673)
T 1r9j_A 79 MAGYNLTMDDLKGFRQDGSRTPGHPERFVTPGVEVTTGPLGQGIANAVGLAIAEAHLAATFNRPGYNIVDHYTYVYCGDG 158 (673)
T ss_dssp HHTCSCCHHHHHTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHH
T ss_pred HcCCCCCHHHHHhhccCCCCCCCCCCCCCCCCeeeccCCCCCcHHHHHHHHHHHHHhhhhccccccCCCCCEEEEEECcc
Confidence 4555 333455555553333333 3677799999999999999999998754 578999999999
Q ss_pred ccccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEE-EEeC-CCHHHHHHHHHHHHHH
Q 016175 203 AANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGL-KVDG-MDALAVKQACKFAKEH 277 (394)
Q Consensus 203 a~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~-~VDG-~D~~av~~a~~~A~~~ 277 (394)
++++|.+||++++|+.++|| +|+||+||+|+|+++..... ..++.++. +| |+++ .||| ||+.++++|+++|.+.
T Consensus 159 ~~~eG~~~Eal~~A~~~~L~~li~i~d~N~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~d~~~l~~Al~~A~~~ 237 (673)
T 1r9j_A 159 CLMEGVCQEALSLAGHLALEKLIVIYDSNYISIDGSTSLSF-TEQCHQKYVAMGFHVIEVKNGDTDYEGLRKALAEAKAT 237 (673)
T ss_dssp HHHSHHHHHHHHHHHHHTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHTTCEEEEESCTTTCHHHHHHHHHHHHHC
T ss_pred hhcccHHHHHHHHHHHhCCCcEEEEEECCCCccccchhhcc-CHhHHHHHHHCCCeEEEEeCCCCCHHHHHHHHHHHHHc
Confidence 99999999999999999999 89999999999988877665 45677765 45 8999 8999 9999999999988751
Q ss_pred HhhCCCEEEEEEeeecCCCCCCCC---CCCCCCchhhhhhh
Q 016175 278 ALKNGPMILEMDTYRYHGHSMSDP---GSTYRTRDEISGVR 315 (394)
Q Consensus 278 ar~~gP~lIe~~t~R~~GHs~~D~---~~~YR~~~e~~~~~ 315 (394)
.++|++|+++|+|++||++.|. +..+++++|++.++
T Consensus 238 --~~~P~lI~~~T~kg~G~~~~~~~~~H~~~~~~ee~~~~~ 276 (673)
T 1r9j_A 238 --KGKPKMIVQTTTIGFGSSKQGTEKVHGAPLGEEDIANIK 276 (673)
T ss_dssp --CSSCEEEEEECCTTTTSTTTTSGGGTSSCCCHHHHHHHH
T ss_pred --CCCCEEEEEecccccccccCCCcccccCCCCHHHHHHHH
Confidence 3899999999999999996554 23357888888775
No 13
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=99.97 E-value=2.8e-31 Score=283.72 Aligned_cols=235 Identities=22% Similarity=0.211 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeec------CCcchhhHhhcCCCH---HHHHHHH
Q 016175 71 MATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIIT------AYRDHCTFLGRGGTL---LEVFSEL 141 (394)
Q Consensus 71 m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~------~yRd~~~~lsrG~~~---~~vlael 141 (394)
...+|.+-..+.... +..| .|....++.+..+|...-+.+. ..||+ +++++||.- |.++. +
T Consensus 12 a~~iR~~~~~~v~~a------~~GH--~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr-~vls~GH~~~~lYa~l~-l 81 (651)
T 2e6k_A 12 VNAIRFLAIDAVEKA------RSGH--PGMPMGMAPLAYLLFREVMRHNPLDPDWPDRDR-FVLSAGHGSMLLYAVLH-L 81 (651)
T ss_dssp HHHHHHHHHHHHHHH------TCSC--CHHHHHHHHHHHHHHHTTCCCCTTCTTCTTSCE-EEESSGGGHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHc------CCCc--cCcchhHHHHHHHHHHHHhcCCccCCCCCCCCe-EEEeCcchhHHHHHHHH-H
Confidence 557777766544432 3457 7888888888888874333332 68999 999999985 66665 4
Q ss_pred hCC----CCCCCCCCCCc---cCccC-CCCCccCCcCCccchhhHHHHHHHHhhhCC----------CCCeEEEEEcccc
Q 016175 142 MGR----KDGCSHGKGGS---MHFYK-KDSGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDGA 203 (394)
Q Consensus 142 ~g~----~~~~~~G~ggs---~H~~~-~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~l~GDGa 203 (394)
.|+ +...+..+.++ .|+.. ...++..++|+||+++|.|+|+|+|.++.+ .+++|||++|||+
T Consensus 82 ~G~~~~~~~l~~~r~~~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~A~A~~~~~~~~~~~~~~~~~~~v~~~~GDG~ 161 (651)
T 2e6k_A 82 TGYDLPLEELKSFRQWGSKTPGHPERGHTPGVEVTTGPLGQGISTAVGLALAERKLAAEFNRPGHVVVDHYTYVLASDGD 161 (651)
T ss_dssp TTCSCCHHHHTTTTSTTCSCCSSCCBTTBTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHH
T ss_pred hCCCCCHHHHHHhhccCCCCCCCCCCCCCCCeeeccccccchHHHHHHHHHHHHhhcccccccccCCCCCEEEEEEChhh
Confidence 566 22334444444 34421 124678899999999999999999998654 5789999999999
Q ss_pred cccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEE-EEeCCCHHHHHHHHHHHHHHHh
Q 016175 204 ANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGL-KVDGMDALAVKQACKFAKEHAL 279 (394)
Q Consensus 204 ~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~-~VDG~D~~av~~a~~~A~~~ar 279 (394)
+++|.+||+|++|+.++|| +|+||+||+|+|+++..... ..++.++. +| |+++ +|||||+.++++|+++|++
T Consensus 162 ~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~--- 237 (651)
T 2e6k_A 162 LMEGVSGEAASLAGHWGLSKLIVFWDDNRISIDGPTDLAF-TEDVLARYRAYGWQTLRVEDVNDLEALRKAIKLAKL--- 237 (651)
T ss_dssp HHSHHHHHHHHHHHHTTCTTEEEEEEECCEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTCHHHHHHHHHHHHH---
T ss_pred hchhHHHHHHHHHHHcCCCeEEEEEECCCccccccccccc-CccHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHH---
Confidence 9999999999999999999 89999999999988876655 45677765 55 8999 9999999999999998875
Q ss_pred hCCCEEEEEEeeecCCCCCCCCCCCC----CCchhhhhhhhcCCHH
Q 016175 280 KNGPMILEMDTYRYHGHSMSDPGSTY----RTRDEISGVRQERDPI 321 (394)
Q Consensus 280 ~~gP~lIe~~t~R~~GHs~~D~~~~Y----R~~~e~~~~~~~~DPi 321 (394)
.++|++|+++|+|++||++.|+ ..| ++++|+++|+ +++|+
T Consensus 238 ~~~P~lI~~~t~kg~G~~~~~~-~~~H~~~~~~~e~~~~~-~~~~~ 281 (651)
T 2e6k_A 238 DERPTLIAVRSHIGFGSPKQDS-AKAHGEPLGPEAVEATR-RNLGW 281 (651)
T ss_dssp SSSCEEEEEECCTTTTSTTTTS-GGGTSSCCHHHHHHHHH-HHHTC
T ss_pred CCCCEEEEEEeEeccccccccc-ccccccCCCHHHHHHHH-HHcCC
Confidence 3899999999999999995454 345 5788898886 45655
No 14
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=99.96 E-value=4.4e-29 Score=266.70 Aligned_cols=230 Identities=20% Similarity=0.194 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeec------CCcchhhHhhcCCCH---HHHHHHH
Q 016175 71 MATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIIT------AYRDHCTFLGRGGTL---LEVFSEL 141 (394)
Q Consensus 71 m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~------~yRd~~~~lsrG~~~---~~vlael 141 (394)
...+|.+-..+.... +..| .|...+++.+..+|+..-+.+. ..||+ +++++||.- |.++. +
T Consensus 10 a~~iR~~~~~~v~~a------~~GH--~g~~l~~~~i~~~L~~~~~~~~~~~p~~~~rDr-fvls~GH~s~~lYa~l~-l 79 (663)
T 3kom_A 10 SNAIRFLSIDATLKA------KSGH--PGMPMGMADIATVLWTKFLKHNPNNPHWINRDR-FVLSNGHGSMLLYSLLH-L 79 (663)
T ss_dssp HHHHHHHHHHHHHHH------TCSC--CHHHHHHHHHHHHHHHHTCCCCTTCTTCTTSCE-EEECSSSCHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHhc------CCCC--CCccHHHHHHHHHHHhhheeeCCCCCCCCCCCe-EEEeCCcccHHHHHHHH-H
Confidence 446777766554432 3457 7889999988888854333332 36999 999999984 77766 6
Q ss_pred hCC----CCCCCCCCCCccCccCCC----CCccCCcCCccchhhHHHHHHHHhhhCCC----------CCeEEEEEcccc
Q 016175 142 MGR----KDGCSHGKGGSMHFYKKD----SGFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGA 203 (394)
Q Consensus 142 ~g~----~~~~~~G~ggs~H~~~~~----~~~~~~~g~lG~~lp~A~G~A~A~k~~~~----------~~~vv~l~GDGa 203 (394)
.|. +...+.++.||...++|+ .++..++|+||+++|.|+|+|+|.++.+. ++.|||++|||+
T Consensus 80 ~G~~~~~~~l~~~r~~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~d~~v~~i~GDG~ 159 (663)
T 3kom_A 80 TGYDLSIEDIKNFRQLHSKTPGHPEYGYTPGVETTTGPLGQGVANAVGMALGEKLLSDRYNTPDLKVIDHHTYVFLGDGC 159 (663)
T ss_dssp HTCSCCHHHHTTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCSCCCCEEEEECHHH
T ss_pred hCCCCCHHHHHhhccCCCCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHhHHhhcccccccccccCCCeEEEEECchh
Confidence 666 344556665653333333 35667899999999999999999987543 789999999999
Q ss_pred cccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEE-EEeCCCHHHHHHHHHHHHHHHh
Q 016175 204 ANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGL-KVDGMDALAVKQACKFAKEHAL 279 (394)
Q Consensus 204 ~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~-~VDG~D~~av~~a~~~A~~~ar 279 (394)
+++|.+||+|++|+.|+|| +|+|++||+|+|+++..... .+++.++. +| |+++ +|||||+.++.+|+++|.+.
T Consensus 160 l~eG~~~Eal~~A~~~~L~~livi~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~A~~~-- 236 (663)
T 3kom_A 160 LMEGVSHEACSLAGTLGLNKLVAFWDDNNISIDGDTKGWF-SDNTPERFRAYGWHVIENVDGHDFVAIEKAINEAHSQ-- 236 (663)
T ss_dssp HHSHHHHHHHHHHHHHTCTTEEEEEEECC-----CGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHC--
T ss_pred hhhchHHHHHHHHHHhCCCeEEEEEECCCcccccchhhhc-chhHHHHHHHCCCeEEEEEcCCCHHHHHHHHHHHHhc--
Confidence 9999999999999999999 79999999999988776654 35677765 55 9999 89999999999999887752
Q ss_pred hCCCEEEEEEeeecCCCCCCCCCCCC--C--Cchhhhh
Q 016175 280 KNGPMILEMDTYRYHGHSMSDPGSTY--R--TRDEISG 313 (394)
Q Consensus 280 ~~gP~lIe~~t~R~~GHs~~D~~~~Y--R--~~~e~~~ 313 (394)
.++|+||+++|+|++||++......+ . +++|++.
T Consensus 237 ~~~P~lI~~~T~kg~G~~~~e~~~~~Hg~~l~~e~~~~ 274 (663)
T 3kom_A 237 QQKPTLICCKTVIGFGSPEKAGTASVHGSPLSDQERAS 274 (663)
T ss_dssp SSSCEEEEEECCTTTTCTTTTTCSSTTSSCCCHHHHHH
T ss_pred CCCCEEEEEecccccccCCCCCCccccCCCCCHHHHHH
Confidence 28999999999999999976432223 2 4566654
No 15
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=99.96 E-value=1.9e-29 Score=270.46 Aligned_cols=244 Identities=21% Similarity=0.189 Sum_probs=186.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeec------CCcchhhHhh
Q 016175 56 SVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIIT------AYRDHCTFLG 129 (394)
Q Consensus 56 ~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~------~yRd~~~~ls 129 (394)
...+|.++|.++ ...+|.+-..+.... +..| .|....++.+..+|...-+.+. ..||+ ++++
T Consensus 8 ~~~l~~~~l~~~---a~~iR~~~~~~v~~a------~~GH--~g~~l~~~~i~~~L~~~~~~~~p~~p~~~~rDr-~vls 75 (675)
T 1itz_A 8 GKAATGELLEKS---VNTIRFLAIDAVEKA------NSGH--PGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDR-FVLS 75 (675)
T ss_dssp --CCCHHHHHHH---HHHHHHHHHHHHHHH------TCSC--CHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCE-EEES
T ss_pred cCCCCHHHHHHH---HHHHHHHHHHHHHHc------CCCc--cCccHhHHHHHHHHHHHHhcCCcCCCCCCCCCe-EEEc
Confidence 347888888764 567888876555443 2457 7888888888888874333332 57998 9999
Q ss_pred cCCCH---HHHHHHHhCC-----CCCCCCCCCCccCccCCC----CCccCCcCCccchhhHHHHHHHHhhhCC-------
Q 016175 130 RGGTL---LEVFSELMGR-----KDGCSHGKGGSMHFYKKD----SGFYGGHGIVGAQIPLGCGLAFAQKYSK------- 190 (394)
Q Consensus 130 rG~~~---~~vlael~g~-----~~~~~~G~ggs~H~~~~~----~~~~~~~g~lG~~lp~A~G~A~A~k~~~------- 190 (394)
+||.- |.++. +.|+ +...+.++.|+.-.++|+ .++..++|+||+++|.|+|+|+|.++.+
T Consensus 76 ~GH~~~~lYa~l~-l~G~~~~~~~~l~~~r~~~~~~~ghp~~~~~~~~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~ 154 (675)
T 1itz_A 76 AGHGCMLQYALLH-LAGYDSVKEEDLKQFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPD 154 (675)
T ss_dssp SGGGHHHHHHHHH-HHTCTTCCHHHHTTTTSTTCSSCSSCCTTTCTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTT
T ss_pred CcchHHHHHHHHH-HcCCCCCCHHHHHhcccCCCCCCCCCCCCCCCCeeECCccHHhHHHHHHHHHHHhhhhcccccccc
Confidence 99985 66665 4666 333445555543233333 3577899999999999999999998765
Q ss_pred ---CCCeEEEEEcccccccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEE-EEeCC-
Q 016175 191 ---DETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGL-KVDGM- 262 (394)
Q Consensus 191 ---~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~-~VDG~- 262 (394)
.+++|||++|||++++|.+||+|++|+.++|| +|+||+||+|+|+.+..... ..++..+. +| |+++ +||||
T Consensus 155 ~~~~~~~v~~i~GDG~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~~ 233 (675)
T 1itz_A 155 SEIVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAF-TEDVSTRFEALGWHTIWVKNGNT 233 (675)
T ss_dssp BCCCCCCEEEEECHHHHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CSCHHHHHHHTTCEEEEESCTTT
T ss_pred cCCCCCEEEEEECHhHhchhHHHHHHHHHHHhCCCcEEEEEECCCccCCCChhhhc-ChhHHHHHHhCCCEEEEEecCCC
Confidence 68899999999999999999999999999996 89999999999988776644 55677765 45 8888 89999
Q ss_pred CHHHHHHHHHHHHHHHhhCCCEEEEEEeeecCCCCCCCCCCC----CCCchhhhhhh
Q 016175 263 DALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMSDPGST----YRTRDEISGVR 315 (394)
Q Consensus 263 D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~D~~~~----YR~~~e~~~~~ 315 (394)
|+.++.+|+++|++. .++|++|+++|+|++||+..+++.. +.+++|+++++
T Consensus 234 d~~~l~~al~~a~~~--~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~e~~~~~~ 288 (675)
T 1itz_A 234 GYDDIRAAIKEAKAV--TDKPTLIKVTTTIGFGSPNKANSYSVHGSALGAKEVEATR 288 (675)
T ss_dssp CHHHHHHHHHHHHHC--CSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC--CCCeEEEEEeeecccCcccccCcccccCCCCCHHHHHHHH
Confidence 999999999988752 2889999999999999996533222 35677777654
No 16
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=99.96 E-value=4.3e-30 Score=273.65 Aligned_cols=232 Identities=16% Similarity=0.129 Sum_probs=169.9
Q ss_pred ceecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccC-CCCeeecCCcchh
Q 016175 47 SHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGIT-KKDSIITAYRDHC 125 (394)
Q Consensus 47 ~~~~~~p~~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~-~~D~~~~~yRd~~ 125 (394)
+.+++.|.....++.++|.++++.| |.+...+. .+ ..|++|++.|+-.+.+++...++ +.|++++. |+|+
T Consensus 13 l~~i~~p~d~~~l~~~~l~~l~~~i---R~~~~~~~--~~---~~Gh~~~~lg~v~l~~aL~~~~~~~~D~~v~~-~GH~ 83 (629)
T 2o1x_A 13 LDQIHGPKDLKRLSREQLPALTEEL---RGEIVRVC--SR---GGLHLASSLGAVDIITALHYVLDSPRDRILFD-VGHQ 83 (629)
T ss_dssp GGGCSSHHHHTTSCGGGHHHHHHHH---HHHHHHHH--TT---SSSCHHHHHHTHHHHHHHHHHSCTTTSEEEES-SSTT
T ss_pred hhhCCChhhhhhCCHHHHHHHHHHH---HHHHHHHH--Hh---cCCcCCCchhHHHHHHHHHhhcCCCCCeEEec-CchH
Confidence 5677777777889999999999987 66554333 22 35888888888555555544447 78999887 8885
Q ss_pred ---hHhhcCC-CHHHHHHHHhCCCCCCCCCCCCccCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcc
Q 016175 126 ---TFLGRGG-TLLEVFSELMGRKDGCSHGKGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGD 201 (394)
Q Consensus 126 ---~~lsrG~-~~~~vlael~g~~~~~~~G~ggs~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GD 201 (394)
+.+.+|. +....+.++.|. +|+..++. + .+..+++|++|+++|+|+|+|+|.|+++++++|||++||
T Consensus 84 ~y~~~~l~G~~~~~~~~r~~~g~-~G~p~~~~-s-------~~~~~~~G~~G~gl~~AvG~AlA~k~~~~~~~Vv~v~GD 154 (629)
T 2o1x_A 84 AYAHKILTGRRDQMADIKKEGGI-SGFTKVSE-S-------EHDAITVGHASTSLTNALGMALARDAQGKDFHVAAVIGD 154 (629)
T ss_dssp CHHHHHTTTTGGGGGGTTSTTSC-CSSCCGGG-C-------TTCCSCCSSSSCHHHHHHHHHHHHHHHTCCCCEEEEEET
T ss_pred HHHHHHHhCcHhHHhCcccCCCC-CCCCCCCC-C-------CCCCcCCCcccccHhHHHHHHHHHHHhCCCCeEEEEEch
Confidence 4455555 211222222221 12221111 1 245668999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHCCCCeEEEEEcCCcccccccccccc--------------------------C---------cc
Q 016175 202 GAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAK--------------------------S---------PS 246 (394)
Q Consensus 202 Ga~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~--------------------------~---------~~ 246 (394)
|++++|.+||+||+|+.|++|+||||+||+|+|+++...+.. . ++
T Consensus 155 G~~~~G~~~EaL~~A~~~~~pli~IvnnN~~~i~~~~~~~~~~~~~l~~~~~y~~~~~~~~~~~~~~g~~~~~~~~~~~d 234 (629)
T 2o1x_A 155 GSLTGGMALAALNTIGDMGRKMLIVLNDNEMSISENVGAMNKFMRGLQVQKWFQEGEGAGKKAVEAVSKPLADFMSRAKN 234 (629)
T ss_dssp TGGGSHHHHHHHHHHHHHCCSEEEEEEECSBSSSBCCSSHHHHC------------------------------------
T ss_pred hhhhccHHHHHHHHHHhhCCCEEEEEECCCCCCCCChhHHHHHHHHHhhchhHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence 999999999999999999999999999999999776542100 0 02
Q ss_pred hh---------hhc-Cc-ccEE-EEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecCCCCCC
Q 016175 247 YY---------KRG-DY-VPGL-KVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSMS 299 (394)
Q Consensus 247 ~~---------~~g-~~-~~~~-~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~~ 299 (394)
+. .++ +| ++++ +|||||+.++.+++++|++. ++|++|++.|+|++||+..
T Consensus 235 ~~~~~~~p~~~~~~ea~G~~~~g~vdG~d~~~l~~al~~A~~~---~~P~lI~v~t~kg~G~~~~ 296 (629)
T 2o1x_A 235 STRHFFDPASVNPFAAMGVRYVGPVDGHNVQELVWLLERLVDL---DGPTILHIVTTKGKGLSYA 296 (629)
T ss_dssp ---------CCCTTGGGTCEEEEEEESSCHHHHHHHHHHHTTS---SSEEEEEEECCTTTTCHHH
T ss_pred HHHhhcCcccchHHHhcCCeEEeeECCcCHHHHHHHHHHHHhc---CCCEEEEEEEecCCCCChh
Confidence 21 344 44 8888 99999999999998887542 8999999999999999843
No 17
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=99.96 E-value=3.6e-29 Score=265.79 Aligned_cols=232 Identities=20% Similarity=0.251 Sum_probs=177.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCee------ecCCcchhhHhhc
Q 016175 57 VETTPKELLSFFRQMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSI------ITAYRDHCTFLGR 130 (394)
Q Consensus 57 ~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~------~~~yRd~~~~lsr 130 (394)
..+++.+..+|-+....+|.+...+.... |..| .|....++.+..+|+..-+- ....||+ +++++
T Consensus 3 ~~~~~~~~~~l~~~a~~iR~~~i~~~~~~------~~GH--~g~~l~~~e~~~~L~~~~~~~~~~~p~~~~rDr-~v~s~ 73 (616)
T 3mos_A 3 HKPDQQKLQALKDTANRLRISSIQATTAA------GSGH--PTSCCSAAEIMAVLFFHTMRYKSQDPRNPHNDR-FVLSK 73 (616)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHH------TCSC--HHHHHTTHHHHHHHHHTTCBCCTTCTTCTTSCE-EEESS
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHhc------CCCc--CCcchhHHHHHHHHHHHhhccCCCCCCCCCCCe-EEEcC
Confidence 35677777778777889998877654432 4567 78888888888888532111 1256999 99999
Q ss_pred CCCH---HHHHHHHhC---CCCCCCCCCCCc---cCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCC-CCeEEEEEc
Q 016175 131 GGTL---LEVFSELMG---RKDGCSHGKGGS---MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKD-ETVTFALYG 200 (394)
Q Consensus 131 G~~~---~~vlael~g---~~~~~~~G~ggs---~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~-~~~vv~l~G 200 (394)
||.- |.++. +.| ++...+..+.|| .|+.....++..++|+||+++|+|+|+|+|.++.+. ++.|||++|
T Consensus 74 GH~~~~ly~~~~-l~G~~~~~~l~~~r~~~s~l~ghp~~~~~~~d~~~G~lG~gl~~A~G~AlA~~~~~~~~~~vv~v~G 152 (616)
T 3mos_A 74 GHAAPILYAVWA-EAGFLAEAELLNLRKISSDLDGHPVPKQAFTDVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLG 152 (616)
T ss_dssp GGGHHHHHHHHH-HTTSSCGGGGGGTTCTTCSCCSSCCTTSTTCSSCCCSTTCHHHHHHHHHHHHHHTSCCSCCEEEEEE
T ss_pred ccHHHHHHHHHH-HcCCCCHHHHHHhccCCCCCCCCCCCCCCcccccccccCCccHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 9984 55544 334 344445555453 455422334556899999999999999999986555 589999999
Q ss_pred ccccccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHH
Q 016175 201 DGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEH 277 (394)
Q Consensus 201 DGa~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ 277 (394)
||++++|.+||+||+|+.|+|| +|+|++||+|+|+.+.......+++.++. +| |++++|||||+.++.++++++
T Consensus 153 DG~~~eG~~~Eal~~A~~~~l~~livi~nnN~~~i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~d~~~l~~al~~~--- 229 (616)
T 3mos_A 153 DGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQA--- 229 (616)
T ss_dssp TGGGGSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBCTTTTCHHHHHHHHHHTTCEEEEEETTCHHHHHHHHHSC---
T ss_pred ccccccCcHHHHHHHHHHcCCCcEEEEEECCCCCCcCCcccccChHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHhc---
Confidence 9999999999999999999999 68899999999988776655445676665 45 889999999999999988543
Q ss_pred HhhCCCEEEEEEeeecCCCCCCCCCC
Q 016175 278 ALKNGPMILEMDTYRYHGHSMSDPGS 303 (394)
Q Consensus 278 ar~~gP~lIe~~t~R~~GHs~~D~~~ 303 (394)
.++|+||+++|+|++||+..+++.
T Consensus 230 --~~~P~lI~v~T~kg~G~~~~e~~~ 253 (616)
T 3mos_A 230 --KHQPTAIIAKTFKGRGITGVEDKE 253 (616)
T ss_dssp --CSSCEEEEEECCTTTTSTTTTTCS
T ss_pred --CCCCEEEEEEEecccccccccCch
Confidence 289999999999999998775443
No 18
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=99.96 E-value=2.1e-29 Score=270.02 Aligned_cols=233 Identities=21% Similarity=0.169 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeee------cCCcchhhHhhcCCCH---HHHHHH
Q 016175 70 QMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSII------TAYRDHCTFLGRGGTL---LEVFSE 140 (394)
Q Consensus 70 ~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~------~~yRd~~~~lsrG~~~---~~vlae 140 (394)
....+|.+...+.... +..| .|....++.+..+|...-+.+ +..||+ +++++||.- |.++.
T Consensus 7 ~a~~iR~~~~~~v~~a------~~GH--~g~~l~~~~i~~~L~~~~~~~~~~~p~~~~rDr-~v~s~GH~~~~lYa~~~- 76 (669)
T 2r8o_A 7 LANAIRALSMDAVQKA------KSGH--PGAPMGMADIAEVLWRDFLKHNPQNPSWADRDR-FVLSNGHGSMLIYSLLH- 76 (669)
T ss_dssp HHHHHHHHHHHHHHHH------TCSC--CHHHHHHHHHHHHHHHHTCCCCTTCTTCTTCCE-EEESSGGGHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHc------CCCc--cCCchhHHHHHHHHHHHhhcCCcCCCCCCCCCe-EEEeCccHHHHHHHHHH-
Confidence 3567787766554432 3457 788888888888876322222 146998 999999985 66554
Q ss_pred HhCC----CCCCCCCCCCc---cCcc-CCCCCccCCcCCccchhhHHHHHHHHhhhCC----------CCCeEEEEEccc
Q 016175 141 LMGR----KDGCSHGKGGS---MHFY-KKDSGFYGGHGIVGAQIPLGCGLAFAQKYSK----------DETVTFALYGDG 202 (394)
Q Consensus 141 l~g~----~~~~~~G~ggs---~H~~-~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~----------~~~~vv~l~GDG 202 (394)
+.|. +...+.++.|+ .|+. ....++..++|+||+++|.|+|+|+|.++.+ .+++|||++|||
T Consensus 77 l~G~~~~~~~l~~~r~~~~~~~ghp~~~~~~g~~~~~G~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~~~~v~~~~GDG 156 (669)
T 2r8o_A 77 LTGYDLPMEELKNFRQLHSKTPGHPEVGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDG 156 (669)
T ss_dssp HHTCSCCHHHHTTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHH
T ss_pred HcCCCCCHHHHHHhhcCCCCCCCCCCccCCCCcccccccccchHHHHHHHHHHHHHhccccccCccCCcCCeEEEEECHh
Confidence 4455 22334444444 4543 1124678899999999999999999998653 378999999999
Q ss_pred ccccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEE-EEeCCCHHHHHHHHHHHHHHH
Q 016175 203 AANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGL-KVDGMDALAVKQACKFAKEHA 278 (394)
Q Consensus 203 a~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~-~VDG~D~~av~~a~~~A~~~a 278 (394)
++++|.+||+|++|+.++|| +|+||+||+|+|+.+..... ..++.++. +| |+++ +|||||+.++++|+++|++.
T Consensus 157 ~~~eG~~~Eal~~A~~~~L~~li~i~~nN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~al~~a~~~- 234 (669)
T 2r8o_A 157 CMMEGISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWF-TDDTAMRFEAYGWHVIRDIDGHDAASIKRAVEEARAV- 234 (669)
T ss_dssp HHHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHHHC-
T ss_pred HhcchHHHHHHHHHHHcCCCcEEEEEECCCcEecccccccc-CccHHHHHHHCCCeEEeEECCCCHHHHHHHHHHHHhc-
Confidence 99999999999999999999 89999999999988776544 35677665 45 8898 99999999999999998761
Q ss_pred hhCCCEEEEEEeeecCCCCC-CCCC---CCCCCchhhhhhh
Q 016175 279 LKNGPMILEMDTYRYHGHSM-SDPG---STYRTRDEISGVR 315 (394)
Q Consensus 279 r~~gP~lIe~~t~R~~GHs~-~D~~---~~YR~~~e~~~~~ 315 (394)
.++|++|+++|+|++||+. .|+. ..||+++|+++|+
T Consensus 235 -~~~P~lI~~~T~kg~G~~~~~~~~~~H~~~~~~ee~~~~~ 274 (669)
T 2r8o_A 235 -TDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTR 274 (669)
T ss_dssp -CSSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHHH
T ss_pred -CCCCEEEEEEeEeccCcCCcCCCCcccCCCCCHHHHHHHH
Confidence 2889999999999999994 4432 4599999998876
No 19
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=99.96 E-value=2.1e-29 Score=270.59 Aligned_cols=230 Identities=20% Similarity=0.200 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeec------CCcchhhHhhcCCCH---HHHHHHH
Q 016175 71 MATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIIT------AYRDHCTFLGRGGTL---LEVFSEL 141 (394)
Q Consensus 71 m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~------~yRd~~~~lsrG~~~---~~vlael 141 (394)
...+|.+-..+.... +..| .|...+++.+..+|+..-+.+. ..||+ ++|++||.- |.++. +
T Consensus 49 a~~iR~~~i~~v~~a------~~GH--~g~~l~~aei~~~L~~~~~~~~~~~p~~~~rDr-fvls~GH~s~~lYa~l~-l 118 (711)
T 3uk1_A 49 ANAIRALAMDAVQQA------NSGH--PGMPMGMAEIGVALWSRHLKHNPTNPHWADRDR-FVLSNGHGSMLLYSLLH-L 118 (711)
T ss_dssp HHHHHHHHHHHHHHH------TCSC--CHHHHHTHHHHHHHHHHTCCCCTTCTTCTTCCE-EEECSGGGHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHhc------CCCc--cCchHHHHHHHHHHHhhhEeeCCCCCCCCCCCe-EEEeCCcccHHHHHHHH-H
Confidence 557777766554432 3457 7888899988888854333332 36999 999999984 77766 6
Q ss_pred hCC----CCCCCCCCCCccCccCCC----CCccCCcCCccchhhHHHHHHHHhhhCCC----------CCeEEEEEcccc
Q 016175 142 MGR----KDGCSHGKGGSMHFYKKD----SGFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGA 203 (394)
Q Consensus 142 ~g~----~~~~~~G~ggs~H~~~~~----~~~~~~~g~lG~~lp~A~G~A~A~k~~~~----------~~~vv~l~GDGa 203 (394)
.|. +...+.++.||...++|+ .++..++|+||+++|.|+|+|+|.++.+. ++.|||++|||+
T Consensus 119 ~G~~~~~~~l~~~r~~~s~~~ghp~~~~~~gve~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~vv~i~GDG~ 198 (711)
T 3uk1_A 119 TGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGC 198 (711)
T ss_dssp HTCSCCHHHHHTTTSTTCSCCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCCCCCEEEEECHHH
T ss_pred hCCCCCHHHHHhhccccCCCCCCCCCCCCCCcccCccchhhHHHHHHHHHHHHHhhcccccccccccCCCeEEEEECCcc
Confidence 666 334455555553333333 35667899999999999999999986543 789999999999
Q ss_pred cccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEE-EeCCCHHHHHHHHHHHHHHHh
Q 016175 204 ANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLK-VDGMDALAVKQACKFAKEHAL 279 (394)
Q Consensus 204 ~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~-VDG~D~~av~~a~~~A~~~ar 279 (394)
+++|.+||+|++|+.++|| +|+|++||+|+|+.+..... .+++.++. +| |++++ |||||+.++.+|+++|++
T Consensus 199 l~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~~vdG~d~~~l~~Al~~A~~--- 274 (711)
T 3uk1_A 199 LMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWF-HDDTPKRFEAYGWNVIPNVNGHDVDAIDAAIAKAKR--- 274 (711)
T ss_dssp HHSHHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEEETTCHHHHHHHHHHHTT---
T ss_pred hhhccHHHHHHHHHHhCCCcEEEEEECCCcccccchhhhc-CCCHHHHHHHcCCcEEEEeCCCCHHHHHHHHHHHHh---
Confidence 9999999999999999999 89999999999988776654 35677765 55 99998 899999999998887653
Q ss_pred hCCCEEEEEEeeecCCCCCCCCCCCCC----Cchhhhhh
Q 016175 280 KNGPMILEMDTYRYHGHSMSDPGSTYR----TRDEISGV 314 (394)
Q Consensus 280 ~~gP~lIe~~t~R~~GHs~~D~~~~YR----~~~e~~~~ 314 (394)
.++|+||+|+|+|++||+..++...|+ +++|++..
T Consensus 275 ~~~P~lI~v~T~kG~G~~~~e~~~~~Hg~~l~~e~~~~~ 313 (711)
T 3uk1_A 275 SDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKT 313 (711)
T ss_dssp CSSCEEEEEEC--------------------CHHHHHHH
T ss_pred CCCCEEEEEccccccCCCCCCCcccccCCCCCHHHHHHH
Confidence 289999999999999998654333343 45565543
No 20
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=99.96 E-value=1.8e-28 Score=262.66 Aligned_cols=230 Identities=24% Similarity=0.227 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeee------cCCcchhhHhhcCCCH---HHHHHHHh
Q 016175 72 ATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSII------TAYRDHCTFLGRGGTL---LEVFSELM 142 (394)
Q Consensus 72 ~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~------~~yRd~~~~lsrG~~~---~~vlael~ 142 (394)
..+|.+-..+.... +..| .|...+++.+..+|...-+.+ +..||+ ++|++||.- |.++. +.
T Consensus 35 ~~iR~~~~~~v~~a------~~GH--~g~~l~~~~i~~~L~~~~l~~~p~~p~~~~rDr-fvls~GH~~~~lYa~l~-l~ 104 (690)
T 3m49_A 35 NTIRTLSIDAIEKA------NSGH--PGMPMGAAPMAYTLWTQFMKHNPNNPTWFNRDR-FVLSAGHGSMLLYSLLH-LS 104 (690)
T ss_dssp HHHHHHHHHHHHHH------TCSC--CHHHHHHHHHHHHHHHHTCCCCTTCTTCTTSCE-EEESSGGGHHHHHHHHH-HT
T ss_pred HHHHHHHHHHHHhc------CCCC--CCcchHHHHHHHHHHHHHhcCCCCCCCCCCCCe-EEECCccHHHHHHHHHH-HH
Confidence 36777766554432 3457 788888888888876322211 146999 999999984 55554 45
Q ss_pred CC----CCCCCCCCCCccCccCCC----CCccCCcCCccchhhHHHHHHHHhhhCCC----------CCeEEEEEccccc
Q 016175 143 GR----KDGCSHGKGGSMHFYKKD----SGFYGGHGIVGAQIPLGCGLAFAQKYSKD----------ETVTFALYGDGAA 204 (394)
Q Consensus 143 g~----~~~~~~G~ggs~H~~~~~----~~~~~~~g~lG~~lp~A~G~A~A~k~~~~----------~~~vv~l~GDGa~ 204 (394)
|. +...+..+.||.-+++|+ .++..++|+||+++|.|+|+|+|.++.+. ++.|||++|||++
T Consensus 105 G~~~~~~~l~~~rq~gs~~~Ghp~~~~~pgv~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~~~~d~~v~~i~GDG~l 184 (690)
T 3m49_A 105 GYDVTMDDLKNFRQWGSKTPGHPEYGHTAGVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDL 184 (690)
T ss_dssp TSSCCHHHHTTTTCTTCSSCSSCCTTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCBTTBCCSCCCEEEEECHHHH
T ss_pred CCCCCHHHHHhhccCCCCCCCCCCCCCCCccccCCccccccHHHHHHHHHHHHHhhccccccccccCCCeEEEEECchhh
Confidence 54 334555665653334443 35667899999999999999999986542 7899999999999
Q ss_pred ccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEEE-eCCCHHHHHHHHHHHHHHHhh
Q 016175 205 NQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKV-DGMDALAVKQACKFAKEHALK 280 (394)
Q Consensus 205 ~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~V-DG~D~~av~~a~~~A~~~ar~ 280 (394)
++|.+||++++|+.++|| +|+|++||+|+|+.+..... .+++.++. +| |++++| ||||+.++.+|+++|.+. .
T Consensus 185 ~eG~~~Eal~~A~~~~L~~livI~dnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~v~DG~d~~~l~~Al~~a~~~--~ 261 (690)
T 3m49_A 185 MEGVSAEASSLAAHLQLGRLVVLYDSNDISLDGDLNRSF-SESVEDRYKAYGWQVIRVEDGNDIEAIAKAIEEAKAD--E 261 (690)
T ss_dssp HSHHHHHHHHHHHHTTCTTEEEEEEECSBCSSSBGGGTC-CCCHHHHHHHHTCEEEEESCTTCHHHHHHHHHHHHHC--C
T ss_pred hhccHHHHHHHHHHhCCCeEEEEEECCCeecccchhhcc-chhHHHHHHHcCCcEEEEecCCCHHHHHHHHHHHHhc--C
Confidence 999999999999999999 79999999999988776544 34676665 45 889999 999999999999887751 2
Q ss_pred CCCEEEEEEeeecCCCCCCCCCCCCC----Cchhhhhh
Q 016175 281 NGPMILEMDTYRYHGHSMSDPGSTYR----TRDEISGV 314 (394)
Q Consensus 281 ~gP~lIe~~t~R~~GHs~~D~~~~YR----~~~e~~~~ 314 (394)
++|+||+|+|+|++|++..++...|. +++|++..
T Consensus 262 ~~P~lI~v~T~kG~G~~~~~~~~~~Hg~~~~~e~~~~~ 299 (690)
T 3m49_A 262 KRPTLIEVRTTIGFGSPNKSGKSASHGSPLGVEETKLT 299 (690)
T ss_dssp SSCEEEEEECCTTTTCTTTTTSGGGTSSCCCHHHHHHH
T ss_pred CCCEEEEEEeecccccCcccCcccccCCCCCHHHHHHH
Confidence 89999999999999998654433332 34555543
No 21
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=99.95 E-value=6.4e-28 Score=256.31 Aligned_cols=216 Identities=20% Similarity=0.198 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccCCchHHHHHHHHhccCCCCeeec------CCcchhhHhhcCCCH---HHHHHH
Q 016175 70 QMATMRRMEIAADSLYKAKLVRGFCHLYDGQEAVAIGMEAGITKKDSIIT------AYRDHCTFLGRGGTL---LEVFSE 140 (394)
Q Consensus 70 ~m~~~R~~e~~~~~l~~~g~i~gf~h~~~GqEa~~vg~~~aL~~~D~~~~------~yRd~~~~lsrG~~~---~~vlae 140 (394)
....+|.+-..+.... +..| .|....++.+..+| ..-+.+. ..||+ +++++||.- |.++.
T Consensus 9 ~a~~iR~~~i~~v~~a------~~GH--~g~~lg~~ei~~~L-~~~~~~~p~~p~~~~rDr-fvls~GH~~~~lYa~l~- 77 (632)
T 3l84_A 9 QANTLRFLSADMVQKA------NSGH--PGAPLGLADILSVL-SYHLKHNPKNPTWLNRDR-LVFSGGHASALLYSFLH- 77 (632)
T ss_dssp HHHHHHHHHHHHHHHH------TCSC--CHHHHHHHHHHHHH-TTTCCCCTTCTTCTTSCE-EEESSGGGHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhc------CCCC--CCcChhHHHHHHHH-HHHhCcCCCCCCCCCCCE-EEEcCCcccHHHHHHHH-
Confidence 4567888776555432 3457 78888888888888 3322221 46999 999999984 66654
Q ss_pred HhCC----CCCCCCCCCCc---cCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCC-------CCeEEEEEccccccc
Q 016175 141 LMGR----KDGCSHGKGGS---MHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKD-------ETVTFALYGDGAANQ 206 (394)
Q Consensus 141 l~g~----~~~~~~G~ggs---~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~-------~~~vv~l~GDGa~~e 206 (394)
+.|+ ++..+.++.|+ .|+.....++..++|+||+++|.|+|+|+|.++++. ++.|||++|||++++
T Consensus 78 l~G~~~~~~~l~~~r~~~s~~~ghp~~~~~g~~~~tG~lG~gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~GDG~~~e 157 (632)
T 3l84_A 78 LSGYDLSLEDLKNFRQLHSKTPGHPEISTLGVEIATGPLGQGVANAVGFAMAAKKAQNLLGSDLIDHKIYCLCGDGDLQE 157 (632)
T ss_dssp HHTCSCCHHHHTTTTCTTCSSCSSCCTTSTTCCSCCCSTTHHHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEEEHHHHHS
T ss_pred HhCCCCCHHHHHHHhcCCCCCCCCCCCCCCCcccCCcchhhHHHHHHHHHHHHHhhccccccCCCCCeEEEEECCcchhh
Confidence 4565 33445555554 344322346677899999999999999999997643 789999999999999
Q ss_pred chHHHHHHHHHHCCCC-eEEEEEcCCccccccccccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCC
Q 016175 207 GQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGP 283 (394)
Q Consensus 207 G~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP 283 (394)
|.+||+|++|+.++|| +|+|++||+|+|+.+..... .+++.++. +| |++++|||||+.++.+|+++|.+ .++|
T Consensus 158 G~~~Eal~~A~~~~L~~livi~nnN~~~i~~~~~~~~-~~d~~~~~~a~G~~~~~vdGhd~~~l~~al~~A~~---~~~P 233 (632)
T 3l84_A 158 GISYEACSLAGLHKLDNFILIYDSNNISIEGDVGLAF-NENVKMRFEAQGFEVLSINGHDYEEINKALEQAKK---STKP 233 (632)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEEECSEETTEEGGGTC-CCCHHHHHHHTTCEEEEEETTCHHHHHHHHHHHHT---CSSC
T ss_pred ccHHHHHHHHHHcCCCcEEEEEECCCcccccchhhhc-ChhHHHHHHHcCCeEEEEeeCCHHHHHHHHHHHHh---CCCC
Confidence 9999999999999999 89999999999988776544 35677665 45 88899999999999998887764 2899
Q ss_pred EEEEEEeeecCCCCCCC
Q 016175 284 MILEMDTYRYHGHSMSD 300 (394)
Q Consensus 284 ~lIe~~t~R~~GHs~~D 300 (394)
+||+++|+|++||+...
T Consensus 234 ~lI~v~T~kG~G~~~~e 250 (632)
T 3l84_A 234 CLIIAKTTIAKGAGELE 250 (632)
T ss_dssp EEEEEECCTTTTCGGGT
T ss_pred EEEEEeeEeeecCCCCC
Confidence 99999999999999754
No 22
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=99.92 E-value=5.9e-25 Score=240.58 Aligned_cols=257 Identities=15% Similarity=0.006 Sum_probs=171.9
Q ss_pred ceecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccccccCCchHHHHHHHHhcc-----CCCCeeec
Q 016175 47 SHQCEAPSRSVETTPKELLSFFRQMATMRRMEIAADSLYKA--KLVRGFCHLYDGQEAVAIGMEAGI-----TKKDSIIT 119 (394)
Q Consensus 47 ~~~~~~p~~~~~~s~e~l~~l~~~m~~~R~~e~~~~~l~~~--g~i~gf~h~~~GqEa~~vg~~~aL-----~~~D~~~~ 119 (394)
.+.|..|.......+.+|.+ +....||.+-..+...... +++ ..| .|.-++++.+..+| +..+ -+
T Consensus 60 l~~i~~~~~~~~p~d~~l~~--~la~~iR~~~i~~v~~a~~~~~~~--gGH--~gs~ls~ael~~~l~~~~~~~~~--~~ 131 (886)
T 2qtc_A 60 INTIPVEEQPEYPGNLELER--RIRSAIRWNAIMTVLRASKKDLEL--GGH--MASFQSSATIYDVCFNHFFRARN--EQ 131 (886)
T ss_dssp SCSSCGGGCCCCCSCHHHHH--HHHHHHHHHHHHHHHHHHHTCSCC--CCC--SHHHHHHHHHHHHHHHHTCCCCC--SS
T ss_pred hhhCCCccccCCCchHHHHH--HHHHHHHHHHHHHHHHhcCCCCCC--ccC--cCCcHHHHHHHHHHHHHhcCCCC--CC
Confidence 45554444444444555542 2355677776655444221 222 356 67777777666554 3221 12
Q ss_pred CCcchhhHhhcCCCH---HHHHHHHhCCCC---CCCCCCC--CccCccCCCC-----CccCCcCCccchhhHHHHHHHHh
Q 016175 120 AYRDHCTFLGRGGTL---LEVFSELMGRKD---GCSHGKG--GSMHFYKKDS-----GFYGGHGIVGAQIPLGCGLAFAQ 186 (394)
Q Consensus 120 ~yRd~~~~lsrG~~~---~~vlael~g~~~---~~~~G~g--gs~H~~~~~~-----~~~~~~g~lG~~lp~A~G~A~A~ 186 (394)
..|| +++++||.- |..+ -+.|+-+ ..+..+. ++.|.+.|.. ++..++|++|.+++.|+|+|+|.
T Consensus 132 ~~~D--~V~~~GH~sp~~Ya~~-~l~Gr~~~e~l~~fRq~~~~~gl~~~p~~~~~p~~~~~~tG~~G~g~s~AiG~A~a~ 208 (886)
T 2qtc_A 132 DGGD--LVYFQGHISPGVYARA-FLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFL 208 (886)
T ss_dssp SCCC--EEECCGGGHHHHHHHH-HHTTSSCHHHHTTBTCCTTSSCBCSSCCTTTSTTTCCCCCCSTTHHHHHHHHHHHHH
T ss_pred CCCC--EEEEcchhHHHHHHHH-HHhCCCCHHHHHhccCCCCCCCCCCCCCcccCCCcccccccccCccHHHHHHHHHHh
Confidence 3455 888888875 4332 2456532 2223221 1233333222 36678999999999999999999
Q ss_pred hh-------CCCCCeEEEEEcccccccchHHHHHHHHHHCCCC-eEEEEEcCCccccccccccc-cCcchhhhc--Cccc
Q 016175 187 KY-------SKDETVTFALYGDGAANQGQLFEALNIAALWDLP-AILVCENNHYGMGTAEWRAA-KSPSYYKRG--DYVP 255 (394)
Q Consensus 187 k~-------~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~Lp-vI~vv~NN~~~i~~~~~~~~-~~~~~~~~g--~~~~ 255 (394)
++ ++.++.|+|++|||++++|.+|||||+|+.++|+ +||||+||+++|+.+..... ...++.++. ..|+
T Consensus 209 ~~l~~~~~~~~~~~~v~aviGDG~l~eG~~~EAl~~A~~~~L~nli~Vvn~N~~si~~~v~~~~~~~~~l~~~~~~~G~~ 288 (886)
T 2qtc_A 209 KYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWN 288 (886)
T ss_dssp HHHHHTTSCCCTTCCEEEEEETGGGGSHHHHTTHHHHHHTTCTTEEEEEEECSBCSSSBSCTTSCHHHHHHHHHHHTTCE
T ss_pred hhhcccccccCCCCEEEEEECCccccccchHHHHHHHHHcCCCcEEEEEECCCcccCCCccccccccHHHHHHHHhCCCC
Confidence 98 7889999999999999999999999999999998 89999999999988776421 123344432 3377
Q ss_pred EEEE---------------------------------------------------------------------eCCCHHH
Q 016175 256 GLKV---------------------------------------------------------------------DGMDALA 266 (394)
Q Consensus 256 ~~~V---------------------------------------------------------------------DG~D~~a 266 (394)
+++| ||||+.+
T Consensus 289 ~~~v~~g~~~~~ll~~~~~~~l~~~~~~~~d~~~q~~~~~~g~~~r~~~F~~~~~~~~l~~~~~d~~i~~l~~dGhD~~~ 368 (886)
T 2qtc_A 289 VIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKK 368 (886)
T ss_dssp EEEECBCTTHHHHHHHCSSCHHHHHHHHCCHHHHHHHTTSCHHHHHHHTSTTSHHHHTTTTTCCHHHHHTCCBGGGCHHH
T ss_pred EEEEecchhHHHHHccCCchHHHHHHHhccchhhhhhhhccchHHHHhhcccchHHHHHHhhcChhhHhhcccCCCCHHH
Confidence 7877 7999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEEEeeecCCCCC--CCCC-C---CCCCchhhhhhhh
Q 016175 267 VKQACKFAKEHALKNGPMILEMDTYRYHGHSM--SDPG-S---TYRTRDEISGVRQ 316 (394)
Q Consensus 267 v~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~--~D~~-~---~YR~~~e~~~~~~ 316 (394)
|++|+++|++. .++|++|+++|+|++||+. .++. . .|++.+|++.++.
T Consensus 369 l~~a~~~A~~~--~~~PtlI~~~T~KG~G~~~~~e~~~~~H~~~~l~~~~~~~~r~ 422 (886)
T 2qtc_A 369 IYAAFKKAQET--KGKATVILAHTIKGYGMGDAAKGKNIAHQVKKMNMDGVRHIRD 422 (886)
T ss_dssp HHHHHHHHHHC--CSSCEEEEEECCTTTTCTTCC-------------CHHHHHHHH
T ss_pred HHHHHHHHHHc--CCCCEEEEEeeeeccccchhhcCCccccCCCCCCHHHHHHHHH
Confidence 99999998864 3689999999999999983 2332 2 2788888888763
No 23
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=99.84 E-value=1.9e-21 Score=206.03 Aligned_cols=162 Identities=17% Similarity=0.216 Sum_probs=122.3
Q ss_pred CcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC-Cccccccc--------
Q 016175 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAE-------- 238 (394)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN-~~~i~~~~-------- 238 (394)
+.|+||+++|.|+|+++|. ++++|||++|||++++| +++|++|+.+++|+++||.|| +|++.+..
T Consensus 418 ~~g~~G~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~lp~~~vv~nN~~~~~~~~~~~~~~~~~ 491 (603)
T 4feg_A 418 LFATMGVGIPGAIAAKLNY----PERQVFNLAGDGGASMT--MQDLATQVQYHLPVINVVFTNCQYGFIKDEQEDTNQND 491 (603)
T ss_dssp SSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHCSSC
T ss_pred ccccccchhHHHhhHHHhC----CCCcEEEEeccHHHhhh--HHHHHHHHHHCcCeEEEEEECCchHHHHHHHHHhcCCC
Confidence 5799999999999999986 46789999999999886 666999999999987777766 58873211
Q ss_pred --cccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEe---eecCCCCCCCCCCCCCCch--
Q 016175 239 --WRAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDT---YRYHGHSMSDPGSTYRTRD-- 309 (394)
Q Consensus 239 --~~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t---~R~~GHs~~D~~~~YR~~~-- 309 (394)
......++|.+++ +| +++++||+ +.++.+++++|++. ..+||+|||+.| +|..+|...|++..||..+
T Consensus 492 ~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~~l~~al~~a~~~-~~~gP~lIev~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (603)
T 4feg_A 492 FIGVEFNDIDFSKIADGVHMQAFRVNK--IEQLPDVFEQAKAI-AQHEPVLIDAVITGDRPLPAEKLRLDSAMSSAADIE 568 (603)
T ss_dssp CCSSBCCCCCHHHHHHHTTCEEEEECB--GGGHHHHHHHHHHH-TTTSCEEEEEECCCCCCCCTTSCCCCTTTSCHHHHH
T ss_pred cccCcCCCCCHHHHHHHCCCeEEEECC--HHHHHHHHHHHHHh-cCCCcEEEEEEeCCCCCCCcccchhhhhhhhHHHHH
Confidence 1122345788876 55 99999985 55777777777621 128999999999 5566888888777787665
Q ss_pred hhhhhhhcCCHHHHHHHHHHHcCCCCHHHH
Q 016175 310 EISGVRQERDPIERIRKLILAHDLATEKEL 339 (394)
Q Consensus 310 e~~~~~~~~DPi~~~~~~L~~~g~~t~~~l 339 (394)
+..+|+ ++||+.+|+++|.++|+|++++.
T Consensus 569 ~~~~~~-~~d~~~~~~~~l~~~g~~~~~~~ 597 (603)
T 4feg_A 569 AFKQRY-EAQDLQPLSTYLKQFGLDDLQHQ 597 (603)
T ss_dssp HHHHHH-TCTTCCCHHHHHHHTTC------
T ss_pred HHHhhC-CcccCCchHHHHHHcCCchhhhh
Confidence 555564 59999999999999999997653
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=99.67 E-value=1.1e-16 Score=173.29 Aligned_cols=199 Identities=16% Similarity=0.083 Sum_probs=139.3
Q ss_pred cccccCCchHHHHHHHHhccCCCCeeecCCcchhhHhhcCCC---HHHHHHH--HhCCCC---------------CCCCC
Q 016175 92 GFCHLYDGQEAVAIGMEAGITKKDSIITAYRDHCTFLGRGGT---LLEVFSE--LMGRKD---------------GCSHG 151 (394)
Q Consensus 92 gf~h~~~GqEa~~vg~~~aL~~~D~~~~~yRd~~~~lsrG~~---~~~vlae--l~g~~~---------------~~~~G 151 (394)
+..| .|....++.+...+..-+ -...||+-++|++||. +|.++.. ++.... -+++.
T Consensus 81 ~sGH--~G~~~g~a~iy~~~~~~~--~~~~rDr~fvls~GHg~p~lYa~l~l~G~~~~~~p~~s~d~e~Lk~lfrqfs~~ 156 (845)
T 3ahc_A 81 LVGH--WGTTPGLNFLLAHINRLI--ADHQQNTVFIMGPGHGGPAGTSQSYVDGTYTEYYPNITKDEAGLQKFFRQFSYP 156 (845)
T ss_dssp CCSC--CTTHHHHHHHHHHHHHHH--HHHTBCBCCEESSGGGHHHHHHHHHHHTHHHHHCTTSCSSHHHHHHHHHHBTCT
T ss_pred CCCC--CCCCHHHHHHHHHHHHhc--ccCCCceEEEECcCcHHHHHHHHHHHcCCCccccccccccHHHHHHHHHhccCC
Confidence 5678 777777766644332111 1135888778899987 4544332 111000 01111
Q ss_pred CCCccCccCCCCCccCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccch---HHHHHHHHHHCCCC-eEEEE
Q 016175 152 KGGSMHFYKKDSGFYGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQ---LFEALNIAALWDLP-AILVC 227 (394)
Q Consensus 152 ~ggs~H~~~~~~~~~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~---~~Ealn~Aa~~~Lp-vI~vv 227 (394)
-+-..|+.....|+...+|+||++++.|+|+|+ ++++..|+|++|||++++|+ .||+.+++..++|. +|.|+
T Consensus 157 gg~pgHp~~~tpGve~~tG~LGqGls~AvG~A~----~~~~~~v~~~~GDGe~e~GsLAg~wea~~~~~~~~l~nl~~i~ 232 (845)
T 3ahc_A 157 GGIPSHFAPETPGSIHEGGELGYALSHAYGAVM----NNPSLFVPCIIGDGEAETGPLATGWQSNKLVNPRTDGIVLPIL 232 (845)
T ss_dssp TSBCSSCCTTSTTCSCCCSSTTCHHHHHHHHHT----TCTTCEEEEEEETTGGGSHHHHHHGGGGGSCCTTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCeecCCCCccchHhHHhhhhh----cCCCCeEEEEECCCchhhhcchhhhHHhhhhhhhcCCCEEEEE
Confidence 112356643334777899999999999999995 45788999999999999999 99999999999999 68888
Q ss_pred EcCCccccccccccc-cCcchhhhc-Cc-ccEE-EEeC-C--CHHHHHHHHHHHHHH-----------Hhh---CCC--E
Q 016175 228 ENNHYGMGTAEWRAA-KSPSYYKRG-DY-VPGL-KVDG-M--DALAVKQACKFAKEH-----------ALK---NGP--M 284 (394)
Q Consensus 228 ~NN~~~i~~~~~~~~-~~~~~~~~g-~~-~~~~-~VDG-~--D~~av~~a~~~A~~~-----------ar~---~gP--~ 284 (394)
++|++.|+.++.... ...++.++- +| |.++ .||| | |+.++.+++.+|++. +|+ ++| +
T Consensus 233 D~N~~~i~g~t~l~~~~~e~l~~rf~a~Gw~v~~~vdG~~~~D~~~i~~a~~~al~~~~~~i~~i~~~A~~~~~~kP~w~ 312 (845)
T 3ahc_A 233 HLNGYKIANPTILARISDEELHDFFRGMGYHPYEFVAGFDNEDHMSIHRRFAELFETIFDEICDIKAAAQTDDMTRPFYP 312 (845)
T ss_dssp EECSBSSSSBCHHHHSCHHHHHHHHHHTTEEEEEEECSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCEE
T ss_pred ECCCCcCCCCccccccCcHHHHHHHHHCCCEEeEEeCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCe
Confidence 999999987775432 223444432 33 7777 8999 9 999999888766632 332 579 9
Q ss_pred EEEEEeeecC-------CCCC
Q 016175 285 ILEMDTYRYH-------GHSM 298 (394)
Q Consensus 285 lIe~~t~R~~-------GHs~ 298 (394)
+|.++|.+|+ |..+
T Consensus 313 ~Ii~rT~kG~tgp~~~~G~~~ 333 (845)
T 3ahc_A 313 MLIFRTPKGWTCPKFIDGKKT 333 (845)
T ss_dssp EEEEECCTTTTSCSEETTEEC
T ss_pred EEEEECcccCCCCCCCCCccc
Confidence 9999999999 8854
No 25
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=99.57 E-value=5.2e-15 Score=156.22 Aligned_cols=120 Identities=16% Similarity=0.227 Sum_probs=97.2
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEE-cCCcccccccccc----
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEWRA---- 241 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~-NN~~~i~~~~~~~---- 241 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||. ||+|++.......
T Consensus 410 ~~~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~q~~~~~~ 483 (590)
T 1v5e_A 410 PLFATMGIAIPGGLGAKNTY----PDRQVWNIIGDGAFSMT--YPDVVTNVRYNMPVINVVFSNTEYAFIKNKYEDTNKN 483 (590)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCTTGGGTTSSSCCS
T ss_pred CCCCcccChHHHHHHHHHhC----CCCeEEEEEechHHhch--HHHHHHHHHhCCCCEEEEEECCchHHHHHHHHHhcCC
Confidence 36899999999999999996 46789999999999886 5889999999999766665 5579986542211
Q ss_pred -----ccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecC
Q 016175 242 -----AKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (394)
Q Consensus 242 -----~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~ 294 (394)
...++|.+++ +| +++++|+ ++.++.+++++|++.+|.+||+|||+.|+|..
T Consensus 484 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~gp~liev~~~~~~ 541 (590)
T 1v5e_A 484 LFGVDFTDVDYAKIAEAQGAKGFTVS--RIEDMDRVMAEAVAANKAGHTVVIDCKITQDR 541 (590)
T ss_dssp CCCCCCCCCCHHHHHHHTTSEEEEEC--BHHHHHHHHHHHHHHHHTTCCEEEEEECCSCC
T ss_pred CccccCCCCCHHHHHHHcCCEEEEEC--CHHHHHHHHHHHHHhcCCCCCEEEEEEecccc
Confidence 1235788776 55 8999997 58899999999998765689999999999864
No 26
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=99.54 E-value=7.2e-15 Score=155.79 Aligned_cols=120 Identities=23% Similarity=0.249 Sum_probs=95.6
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC-Ccccccccc------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN-~~~i~~~~~------ 239 (394)
+++|++|+++|.|+|+|+|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|+|.....
T Consensus 439 g~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 512 (616)
T 2pan_A 439 GQAGPLGWTIPAALGVCAAD----PKRNVVAISGDFDFQFL--IEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMD 512 (616)
T ss_dssp TTTCCTTCHHHHHHHHHHHC----TTCEEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHGGGGTCC
T ss_pred CCcccccchHHHHHHHHHhC----CCCcEEEEEcchhhhCC--HHHHHHHHHhCCCeEEEEEECCcchHHHHHHHHhcCC
Confidence 46799999999999999996 46799999999999875 568999999999976555554 698753211
Q ss_pred --------c--ccc----Ccchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEeeecC
Q 016175 240 --------R--AAK----SPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYH 294 (394)
Q Consensus 240 --------~--~~~----~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~ 294 (394)
. ... ..+|..++ +| +++++|+ ++.++.+++++|++++|+ +||+|||+.|.|..
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~~~~~~gp~lIev~~~~~~ 582 (616)
T 2pan_A 513 YCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVF--KPEDIAPAFEQAKALMAQYRVPVVVEVILERVT 582 (616)
T ss_dssp CSCBCCCCCTTCGGGTTCCCCHHHHHHHTTCEEEEEC--SGGGHHHHHHHHHHHHHHHCSCEEEEEEBCSCC
T ss_pred ccccccccccccccCCCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHhhcccCCCcEEEEEEecccc
Confidence 0 011 25777776 45 8899997 577999999999987776 99999999999876
No 27
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=99.51 E-value=1.6e-14 Score=150.33 Aligned_cols=112 Identities=30% Similarity=0.428 Sum_probs=88.2
Q ss_pred CCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC-Cccccccccc--------
Q 016175 170 GIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEWR-------- 240 (394)
Q Consensus 170 g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN-~~~i~~~~~~-------- 240 (394)
|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++.+....
T Consensus 401 g~~G~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~~l~~a~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~ 474 (528)
T 1q6z_A 401 GGLGFALPAAIGVQLAE----PERQVIAVIGDGSANYS--ISALWTAAQYNIPTIFVIMNNGTYGALRWFAGVLEAENVP 474 (528)
T ss_dssp CCTTSHHHHHHHHHHHC----TTSCEEEEEEHHHHTTT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCCSCC
T ss_pred ccccchHHHHHHHHHhC----CCCcEEEEECCcHHHhh--HHHHHHHHHhCCCeEEEEEeCCcchHhHHHHHHhcCCCcc
Confidence 99999999999999996 45789999999999987 788999999999987777655 5998544211
Q ss_pred --cccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 241 --AAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 241 --~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
.....+|.+++ +| +++++||+ ..++.+++++|++. +||+|||+.|.+
T Consensus 475 ~~~~~~~d~~~~a~a~G~~~~~v~~--~~~l~~al~~a~~~---~gp~liev~~~~ 525 (528)
T 1q6z_A 475 GLDVPGIDFRALAKGYGVQALKADN--LEQLKGSLQEALSA---KGPVLIEVSTVS 525 (528)
T ss_dssp SCBCCCCCHHHHHHHHTCEEEEESS--HHHHHHHHHHHHTC---SSCEEEEEEBCC
T ss_pred cCCCCCCCHHHHHHHcCCeEEEeCC--HHHHHHHHHHHHHC---CCcEEEEEEecC
Confidence 01235777776 45 88999985 56777777766532 899999999975
No 28
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=99.50 E-value=1.8e-14 Score=151.12 Aligned_cols=117 Identities=21% Similarity=0.276 Sum_probs=92.2
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEE-cCCcccccccc------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEW------ 239 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~-NN~~~i~~~~~------ 239 (394)
++.|+||+++|.|+|+++|.| ++++.|||++|||+++++ +++|++|+.+++|+++||. ||+|++.....
T Consensus 416 ~g~g~~G~~l~~AiGaa~a~~--~~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 491 (563)
T 2uz1_A 416 GYLGSMGVGFGTALGAQVADL--EAGRRTILVTGDGSVGYS--IGEFDTLVRKQLPLIVIIMNNQSWGATLHFQQLAVGP 491 (563)
T ss_dssp CTTCCTTTHHHHHHHHHHHHH--HHTCEEEEEEEHHHHGGG--TTHHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHTCT
T ss_pred CCCccccChHHHHHHHHHHhh--CCCCeEEEEEccHHHhCC--HHHHHHHHHhCCCeEEEEEeCCcchHHHHHHHHhcCC
Confidence 357999999999999999986 467899999999999886 5679999999999765555 55798765321
Q ss_pred -ccc----cCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 240 -RAA----KSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 240 -~~~----~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
... ..++|..++ +| +++++|+ ++.++.+++++|++. +||+|||+.|++
T Consensus 492 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~ 546 (563)
T 2uz1_A 492 NRVTGTRLENGSYHGVAAAFGADGYHVD--SVESFSAALAQALAH---NRPACINVAVAL 546 (563)
T ss_dssp TCCCSCBCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHHS---SSCEEEEEECCS
T ss_pred CcccCCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHHC---CCCEEEEEEecc
Confidence 111 235787776 45 8899996 588998888887753 899999999974
No 29
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=99.50 E-value=9.2e-15 Score=153.26 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=92.3
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEE-cCCcccccccc----c-
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEW----R- 240 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~-NN~~~i~~~~~----~- 240 (394)
++.|+||+++|.|+|+|+|.+.++.++.|||++|||+++++ +++|++|+.++||+++||. ||+|+|..... .
T Consensus 410 ~~~g~mG~~l~~A~Gaala~~~~~~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 487 (563)
T 2vk8_A 410 VLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLT--VQEISTMIRWGLKPYLFVLNNDGYTIQKLIHGPKAQY 487 (563)
T ss_dssp TTTCCTTHHHHHHHHHHHHHHHHCTTCCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred cchhhhhhHHHHHHHHHHhCcccCCCCCEEEEEcchHhhcc--HHHHHHHHHcCCCcEEEEEECCcchhhhhhhCCCCCc
Confidence 46899999999999999999887888899999999999874 6779999999999766665 55699854321 1
Q ss_pred -cccCcchhhhc-Cc-cc---EEEEeCCCHHHHHHHHH-HHHHHHhhCCCEEEEEEeee
Q 016175 241 -AAKSPSYYKRG-DY-VP---GLKVDGMDALAVKQACK-FAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 241 -~~~~~~~~~~g-~~-~~---~~~VDG~D~~av~~a~~-~A~~~ar~~gP~lIe~~t~R 292 (394)
....++|.+++ +| ++ +++||+ ++++.++++ ++++. .++|+|||+.|.+
T Consensus 488 ~~~~~~d~~~~a~a~G~~~~~~~~v~~--~~el~~al~~~a~~~--~~~p~liev~~~~ 542 (563)
T 2vk8_A 488 NEIQGWDHLSLLPTFGAKDYETHRVAT--TGEWDKLTQDKSFND--NSKIRMIEVMLPV 542 (563)
T ss_dssp GCCCCCCGGGHHHHTTCSSEEEEEECB--HHHHHHHHTCTTTTS--CSSEEEEEEECCT
T ss_pred ccCCCCCHHHHHHHhCCCCCcEEEecC--HHHHHHHHHHHHHhC--CCCcEEEEEEeCc
Confidence 11235787776 45 88 899984 778877777 55431 1479999999864
No 30
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=99.49 E-value=2.4e-14 Score=150.41 Aligned_cols=116 Identities=17% Similarity=0.240 Sum_probs=91.1
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC-Ccccccccc------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEW------ 239 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN-~~~i~~~~~------ 239 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||.|| +|++.....
T Consensus 417 ~g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 490 (566)
T 1ozh_A 417 NGQQTMGVALPWAIGAWLVN----PERKVVSVSGDGGFLQS--SMELETAVRLKANVLHLIWVDNGYNMVAIQEEKKYQR 490 (566)
T ss_dssp CTTCCTTCHHHHHHHHHHHS----TTSEEEEEEEHHHHHHH--TTHHHHHHHHTCCEEEEEEECSBCHHHHHHHHHHHSS
T ss_pred CCcccccchHHHHHHHHHhC----CCCCEEEEEcChHHhcc--HHHHHHHHHhCCCcEEEEEECCchhHHHHHHHHhcCC
Confidence 35799999999999999996 46899999999999874 567999999999976665555 698764321
Q ss_pred ---ccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeec
Q 016175 240 ---RAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (394)
Q Consensus 240 ---~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~ 293 (394)
.....++|.+++ +| +++++|++ ++++.+++++|++. +||+|||+.|+|.
T Consensus 491 ~~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~a~~~---~gp~liev~~~~~ 544 (566)
T 1ozh_A 491 LSGVEFGPMDFKAYAESFGAKGFAVES--AEALEPTLRAAMDV---DGPAVVAIPVDYR 544 (566)
T ss_dssp CCSCBCCCCCHHHHHHTTTSEEEECCS--GGGHHHHHHHHHHS---SSCEEEEEEBCCT
T ss_pred CccCcCCCCCHHHHHHHcCCeEEEeCC--HHHHHHHHHHHHhC---CCCEEEEEEeCCC
Confidence 112235788877 56 89999974 67888888887643 8999999999864
No 31
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=99.48 E-value=3.3e-14 Score=150.02 Aligned_cols=120 Identities=22% Similarity=0.342 Sum_probs=93.9
Q ss_pred CcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEc-CCcccccccc-------
Q 016175 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCEN-NHYGMGTAEW------- 239 (394)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~N-N~~~i~~~~~------- 239 (394)
+.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||.| |+|++.....
T Consensus 422 g~g~mG~~l~~AiGaala~----~~~~vv~i~GDG~~~~~--~~~L~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~~ 495 (589)
T 2pgn_A 422 AEGILGCGFPMALGAQLAE----PNSRVFLGTGDGALYYH--FNEFRVAVEHKLPVITMVFTNESYGANWTLMNHQFGQN 495 (589)
T ss_dssp TTCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSBCHHHHHHHHHHHSSC
T ss_pred CcchhhhHHHHHHHHHHhC----CCCcEEEEEeeHHHHhh--HHHHHHHHHhCCCeEEEEEECCCcccchHHHHhhcCCC
Confidence 5699999999999999996 46789999999999875 58899999999997655555 5698765321
Q ss_pred --ccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecCCCCC
Q 016175 240 --RAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGHSM 298 (394)
Q Consensus 240 --~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GHs~ 298 (394)
.....++|..++ +| +++++|+. +.++.+++++|++. +||+|||+.|+|..+...
T Consensus 496 ~~~~~~~~d~~~~a~a~G~~~~~v~~--~~el~~al~~a~~~---~gp~liev~~~~~~~~~~ 553 (589)
T 2pgn_A 496 NWTEFMNPDWVGIAKAFGAYGESVRE--TGDIAGALQRAIDS---GKPALIEIPVSKTQGLAS 553 (589)
T ss_dssp CSCBCCCCCHHHHHHHHTCEEEECTT--TCCHHHHHHHHHHH---CSCEEEEEECCSSSSTTT
T ss_pred ccccCCCCCHHHHHHHCCCeEEEECC--HHHHHHHHHHHHhC---CCCEEEEEEecCCCCcCc
Confidence 112245787776 45 88999975 45788888887753 899999999998776543
No 32
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=99.47 E-value=4.3e-14 Score=149.10 Aligned_cols=119 Identities=20% Similarity=0.316 Sum_probs=92.8
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEE-EcCCcccccccc------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW------ 239 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv-~NN~~~i~~~~~------ 239 (394)
+++|++|+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++|| +||+|++.....
T Consensus 423 g~~G~~G~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 496 (590)
T 1ybh_A 423 GGLGAMGFGLPAAIGASVAN----PDAIVVDIDGDGSFIMN--VQELATIRVENLPVKVLLLNNQHLGMVMQWEDRFYKA 496 (590)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSCEEEEEEHHHHHHT--TTHHHHHHHTTCCEEEEEEECSBCHHHHHHHHHHSTT
T ss_pred CCcccccchHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCcEEEEEECCcchHHHHHHHHhcCC
Confidence 45799999999999999996 46789999999999875 567999999999975555 556798754211
Q ss_pred ----cc--c------cCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecCCC
Q 016175 240 ----RA--A------KSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHGH 296 (394)
Q Consensus 240 ----~~--~------~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~GH 296 (394)
.. . ..++|.+++ +| +++++|+ ++.++.+++++|++. +||+|||+.|.|....
T Consensus 497 ~~~~~~~~~p~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~liev~~~~~~~~ 562 (590)
T 1ybh_A 497 NRAHTFLGDPAQEDEIFPNMLLFAAACGIPAARVT--KKADLREAIQTMLDT---PGPYLLDVICPHQEHV 562 (590)
T ss_dssp CCCSCBCSCGGGTTSCSSCHHHHHHHTTCCEEEEC--BHHHHHHHHHHHHHS---SSCEEEEEECCTTCCC
T ss_pred ccccccccccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEecCCccc
Confidence 00 1 135787776 45 8899997 588888888887753 8999999999987654
No 33
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=99.47 E-value=3.8e-14 Score=149.04 Aligned_cols=115 Identities=20% Similarity=0.257 Sum_probs=90.5
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEE-cCCcccccccc------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEW------ 239 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~-NN~~~i~~~~~------ 239 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++||. ||+|++.....
T Consensus 433 ~g~g~mG~~l~~AiGaa~a~----~~~~vv~i~GDG~~~~~--~~~L~~a~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 506 (573)
T 2iht_A 433 AGCSSFGYGIPAAIGAQMAR----PDQPTFLIAGDGGFHSN--SSDLETIARLNLPIVTVVVNNDTNGLIELYQNIGHHR 506 (573)
T ss_dssp SSSCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHHTCCCEEEEEECSBCHHHHHHHHHHHSS
T ss_pred CCCcccccHHHHHHHHHHhC----CCCcEEEEEccHHHHhH--HHHHHHHHHhCCCeEEEEEECCcchhhHHHHHHhcCC
Confidence 35799999999999999996 46789999999999875 5789999999999755555 55698765321
Q ss_pred -----ccccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 240 -----RAAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 240 -----~~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
.....++|.+++ +| +++++|+ +..++.+++++|++ .+||+|||+.|.|
T Consensus 507 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~ 561 (573)
T 2iht_A 507 SHDPAVKFGGVDFVALAEANGVDATRAT--NREELLAALRKGAE---LGRPFLIEVPVNY 561 (573)
T ss_dssp CCGGGTBCCCCCHHHHHHHTTCEEEECC--SHHHHHHHHHHHHT---SSSCEEEEEEBCC
T ss_pred CcCccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEECCC
Confidence 122235787776 45 8899996 57888888887764 2899999999988
No 34
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=99.47 E-value=6.8e-14 Score=146.80 Aligned_cols=116 Identities=22% Similarity=0.314 Sum_probs=90.6
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEE-EEcCCccccccccc----c
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILV-CENNHYGMGTAEWR----A 241 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~v-v~NN~~~i~~~~~~----~ 241 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++| ++||+|++...... .
T Consensus 406 ~~~g~mG~~l~~A~G~ala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 479 (566)
T 2vbi_A 406 MQWGHIGWSVPSAFGNAMGS----QDRQHVVMVGDGSFQLT--AQEVAQMVRYELPVIIFLINNRGYVIEIAIHDGPYNY 479 (566)
T ss_dssp TTTCCTTTHHHHHHHHHHTC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGC
T ss_pred CcccchhhHHHHHHHHHHhC----CCCcEEEEEcchHHHhh--HHHHHHHHHhCCCcEEEEEECCcceEEEeeccCCccC
Confidence 46799999999999999986 46899999999999874 56699999999996544 55667998654321 1
Q ss_pred ccCcchhhhc-Cc-c-----cEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 242 AKSPSYYKRG-DY-V-----PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 242 ~~~~~~~~~g-~~-~-----~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
....+|..++ +| + ++++|+ +..++.+++++|++. .+||+|||+.|.|
T Consensus 480 ~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~~~--~~gp~liev~~~~ 533 (566)
T 2vbi_A 480 IKNWDYAGLMEVFNAGEGHGLGLKAT--TPKELTEAIARAKAN--TRGPTLIECQIDR 533 (566)
T ss_dssp CCCCCTTTHHHHHHTTTCCCEEEEEC--SHHHHHHHHHHHHHC--CSSCEEEEEECCT
T ss_pred CCCCCHHHHHHHcCCCCCCccEEEeC--CHHHHHHHHHHHHhc--CCCcEEEEEEeCc
Confidence 2234677766 45 7 899997 588998888887752 1789999999975
No 35
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=99.46 E-value=6.4e-14 Score=150.27 Aligned_cols=118 Identities=25% Similarity=0.367 Sum_probs=92.4
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEE-EcCCcccccccc------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW------ 239 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv-~NN~~~i~~~~~------ 239 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++|| +||+|+|.....
T Consensus 510 g~~G~mG~~lpaAiGaalA~----p~~~Vv~i~GDGsf~~~--~~eL~ta~~~~l~v~ivV~NN~~~g~~~~~~~~~~~~ 583 (677)
T 1t9b_A 510 GGLGTMGYGLPAAIGAQVAK----PESLVIDIDGDASFNMT--LTELSSAVQAGTPVKILILNNEEQGMVTQWQSLFYEH 583 (677)
T ss_dssp CSSCCTTCHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHHTCCCEEEEEECSSCHHHHHHHHHHSTT
T ss_pred CCcchhhchHHHHHHHHHhC----CCCeEEEEEeehHHhcc--HHHHHHHHHhCCCeEEEEEeCCCchhhhhhhhhhcCC
Confidence 46799999999999999996 57899999999999874 456999999999975555 555698754321
Q ss_pred c----cccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecCC
Q 016175 240 R----AAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYHG 295 (394)
Q Consensus 240 ~----~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~G 295 (394)
+ ....++|.+++ +| +++++|+ ++.++.+++++|++. +||+|||+.|.|...
T Consensus 584 ~~~~~~~~~~d~~~la~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~lIev~~~~~~~ 640 (677)
T 1t9b_A 584 RYSHTHQLNPDFIKLAEAMGLKGLRVK--KQEELDAKLKEFVST---KGPVLLEVEVDKKVP 640 (677)
T ss_dssp CCCSCCCCCCCHHHHHHHTTCEEEEEC--SHHHHHHHHHHHHHC---SSCEEEEEEBCSSCC
T ss_pred CcccCcCCCCCHHHHHHHcCCeEEEEC--CHHHHHHHHHHHHHC---CCcEEEEEEecCCcc
Confidence 1 11245788776 55 8999996 588988888887753 899999999998754
No 36
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=99.44 E-value=8.8e-14 Score=145.39 Aligned_cols=115 Identities=16% Similarity=0.123 Sum_probs=88.1
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEE-cCCcccccccc------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCE-NNHYGMGTAEW------ 239 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~-NN~~~i~~~~~------ 239 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|.+|+.+++|+++||. ||+|+|.....
T Consensus 405 ~~~g~mG~~l~~A~G~a~a~----~~~~vv~~~GDG~~~~~--~~el~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 478 (552)
T 1ovm_A 405 PLWGSIGYTLAAAFGAQTAC----PNRRVIVLTGDGAAQLT--IQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRY 478 (552)
T ss_dssp TTTCCTTHHHHHHHHHHHHC----TTSCEEEEEEHHHHHHH--TTHHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred hhhHhhhhHHHHHHHHHHhC----CCCcEEEEECchHHHhH--HHHHHHHHHhCCCCEEEEEECCCCeEEEeeccCCCCc
Confidence 46899999999999999996 46789999999999864 6679999999999765555 55698864321
Q ss_pred ccccCcchhhhc-Cc-c----cEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 240 RAAKSPSYYKRG-DY-V----PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 240 ~~~~~~~~~~~g-~~-~----~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
.....++|.+++ +| + ++++|+ ++.++.+++++|++ .+||+|||+.|.+
T Consensus 479 ~~~~~~d~~~~a~a~G~~~~~~~~~v~--~~~~l~~al~~a~~---~~gp~liev~~~~ 532 (552)
T 1ovm_A 479 NDIALWNWTHIPQALSLDPQSECWRVS--EAEQLADVLEKVAH---HERLSLIEVMLPK 532 (552)
T ss_dssp GCCCCCCGGGSTTTSCSSCCEEEEEEC--BHHHHHHHHHHHTT---CSSEEEEEEECCT
T ss_pred ccCCCCCHHHHHHHhCCCcCCCEEEeC--CHHHHHHHHHHHHh---CCCCEEEEEEcCc
Confidence 112335787776 55 7 889997 47788777776543 2899999999864
No 37
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=99.44 E-value=1e-13 Score=145.64 Aligned_cols=115 Identities=18% Similarity=0.188 Sum_probs=88.5
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEE-EcCCcccccccc---c--
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW---R-- 240 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv-~NN~~~i~~~~~---~-- 240 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++|| +||+|+|..... .
T Consensus 422 ~~~g~mG~~l~~A~Gaala~----~~~~vv~~~GDG~~~~~--~~eL~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 495 (570)
T 2vbf_A 422 PLWGSIGYTFPAALGSQIAD----KESRHLLFIGDGSLQLT--VQELGLSIREKLNPICFIINNDGYTVEREIHGPTQSY 495 (570)
T ss_dssp TTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEESSSCHHHHHHSCTTCGG
T ss_pred ccchhhhhhHHHHHHHHHhC----CCCcEEEEEcchhhhcC--HHHHHHHHHcCCCCEEEEEECCchHHHHHHhccCCCc
Confidence 46899999999999999996 46899999999999874 566999999999975555 566799755321 1
Q ss_pred -cccCcchhhhc-Cc-cc-----EEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEeee
Q 016175 241 -AAKSPSYYKRG-DY-VP-----GLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYR 292 (394)
Q Consensus 241 -~~~~~~~~~~g-~~-~~-----~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R 292 (394)
....++|.+++ +| ++ +++|+ ++.++.++++++. ++ +||+|||+.|+|
T Consensus 496 ~~~~~~d~~~~a~a~G~~~~~~~~~~v~--~~~el~~al~~a~---~~~~~p~liev~~~~ 551 (570)
T 2vbf_A 496 NDIPMWNYSKLPETFGATEDRVVSKIVR--TENEFVSVMKEAQ---ADVNRMYWIELVLEK 551 (570)
T ss_dssp GCCCCCCGGGHHHHTTCCTTTEEEEEEC--BHHHHHHHHHHHH---HCTTSEEEEEEECCT
T ss_pred cCCCCCCHHHHHHHcCCCcCCcceEEec--CHHHHHHHHHHHH---hcCCCcEEEEEEcCc
Confidence 12235787776 45 87 78997 4788888887642 23 899999999975
No 38
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=99.43 E-value=2.1e-13 Score=142.69 Aligned_cols=117 Identities=20% Similarity=0.322 Sum_probs=88.5
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEE-EEcCCccccccccc-----
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILV-CENNHYGMGTAEWR----- 240 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~v-v~NN~~~i~~~~~~----- 240 (394)
++.|+||.++|.|+|+++|. +++.|||++|||+++++ +++|++|+.+++|+++| ++||+|++.+....
T Consensus 403 ~~~g~mG~~l~~AiGaala~----~~~~vv~i~GDGs~~~~--~~~L~ta~~~~l~~~ivv~nN~~~g~~~~~~~~~~~~ 476 (549)
T 3eya_A 403 FNHGSMANAMPQALGAQATE----PERQVVAMCGDGGFSML--MGDFLSVVQMKLPVKIVVFNNSVLGFVAMEMKAGGYL 476 (549)
T ss_dssp TTTCCTTCHHHHHHHHHHHS----TTSCEEEEEEHHHHHHT--GGGHHHHHHTTCCCEEEEEECSBCCCC----------
T ss_pred CCCchhhhHHHHHHHHHHhC----CCCcEEEEEccchhhcc--HHHHHHHHHhCCCeEEEEEeCCccHHHHHHHHhcCCC
Confidence 36799999999999999996 46789999999998875 56799999999997555 45556887432111
Q ss_pred ----cccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecC
Q 016175 241 ----AAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (394)
Q Consensus 241 ----~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~ 294 (394)
....++|.+.+ +| +++++|+ ++.++.+++++|++. +||+|||+.|.+..
T Consensus 477 ~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~~~ 531 (549)
T 3eya_A 477 TDGTELHDTNFARIAEACGITGIRVE--KASEVDEALQRAFSI---DGPVLVDVVVAKEE 531 (549)
T ss_dssp --CCBCCCCCHHHHHHHTTSEEEEEC--SGGGHHHHHHHHHHS---SSCEEEEEEBCCCC
T ss_pred CcCCcCCCCCHHHHHHHcCCcEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEecccc
Confidence 11235787776 45 8889996 566888888877653 89999999998743
No 39
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=99.42 E-value=2.1e-13 Score=143.20 Aligned_cols=116 Identities=22% Similarity=0.279 Sum_probs=90.5
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeE-EEEEcCCccccccccc----c
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAI-LVCENNHYGMGTAEWR----A 241 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI-~vv~NN~~~i~~~~~~----~ 241 (394)
++.|+||+++|.|+|+++|. +++.|||++|||+++++ +++|++|..+++|++ +|++||+|++...... .
T Consensus 410 ~~~g~~G~~l~~A~G~ala~----~~~~vv~i~GDGs~~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 483 (568)
T 2wvg_A 410 MQWGHIGWSVPAAFGYAVGA----PERRNILMVGDGSFQLT--AQEVAQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNN 483 (568)
T ss_dssp TTTCCTTTHHHHHHHHHHHC----TTSEEEEEEEHHHHHHH--GGGHHHHHHTTCCCEEEEEECSSCHHHHTTSCCGGGC
T ss_pred CCcchhhhHHHHHHHHHHhC----CCCcEEEEEcChhHhcc--HHHHHHHHHcCCCcEEEEEECCcceEeeeeccCCCcC
Confidence 46799999999999999996 46899999999999873 566999999999975 5555667998654321 1
Q ss_pred ccCcchhhhc-Cc-c---------cEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 242 AKSPSYYKRG-DY-V---------PGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 242 ~~~~~~~~~g-~~-~---------~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
....+|.+.+ +| + ++++|+ +..++.+++++|++. .+||+|||+.|+|
T Consensus 484 ~~~~d~~~~a~a~G~~~~~~~~~~~~~~v~--~~~el~~al~~a~~~--~~gp~liev~~~~ 541 (568)
T 2wvg_A 484 IKNWDYAGLMEVFNGNGGYDSGAGKGLKAK--TGGELAEAIKVALAN--TDGPTLIECFIGR 541 (568)
T ss_dssp CCCCCHHHHHHHHHCTTSSSCCCCEEEEES--BHHHHHHHHHHHHHC--CSSCEEEEEECCT
T ss_pred CCCCCHHHHHHHhCCCcccccCCcceEEeC--CHHHHHHHHHHHHhc--CCCcEEEEEEcCc
Confidence 2234777765 44 7 888997 578999999888753 2789999999975
No 40
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=99.42 E-value=1.2e-13 Score=144.98 Aligned_cols=115 Identities=18% Similarity=0.172 Sum_probs=89.5
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEE-EcCCcccccccc-----c
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW-----R 240 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv-~NN~~~i~~~~~-----~ 240 (394)
++.|+||+++|.|+|+|+|. +++.|||++|||+++. .+++|++|+.+++|+++|| +||+|++..... .
T Consensus 419 ~~~g~mG~~l~~A~G~ala~----~~~~vv~i~GDG~~~~--~~~~l~ta~~~~l~~~ivv~nN~~~~~~~~~~~~~~~~ 492 (565)
T 2nxw_A 419 GYYAGMGFGVPAGIGAQCVS----GGKRILTVVGDGAFQM--TGWELGNCRRLGIDPIVILFNNASWEMLRTFQPESAFN 492 (565)
T ss_dssp TTTCCTTCHHHHHHHHHHHT----TTCCEEEEEEHHHHHH--HGGGGGGHHHHTCCCEEEEEECSBCHHHHHHCTTCGGG
T ss_pred CccccccccchHHHHHHHhC----CCCcEEEEEechHHHh--hHHHHHHHHHhCCCCEEEEEECCCCcEEeeecccCCCC
Confidence 35799999999999999996 4678999999999884 5778999999999975555 555698754321 1
Q ss_pred cccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCE-EEEEEeee
Q 016175 241 AAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPM-ILEMDTYR 292 (394)
Q Consensus 241 ~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~-lIe~~t~R 292 (394)
....++|.+++ +| +++++|| +.+++.+++++|++. +||+ |||+.|+|
T Consensus 493 ~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~~liev~~~~ 542 (565)
T 2nxw_A 493 DLDDWRFADMAAGMGGDGVRVR--TRAELKAALDKAFAT---RGRFQLIEAMIPR 542 (565)
T ss_dssp BCCCCCHHHHTGGGTSEEEEEC--BHHHHHHHHHHHHHC---CSSCEEEEEECCT
T ss_pred cCCCCCHHHHHHHcCCCEEEeC--CHHHHHHHHHHHHhc---CCCeEEEEEEccc
Confidence 12345788877 55 8999997 478888888887753 7898 99999864
No 41
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=99.41 E-value=4.7e-13 Score=140.46 Aligned_cols=115 Identities=17% Similarity=0.148 Sum_probs=89.9
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCC-c-cccccc---cc-
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-Y-GMGTAE---WR- 240 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~-~-~i~~~~---~~- 240 (394)
++.|+||+++|.|+|+++| +++.|||++|||++++. +++|++|+++++|+++||.||+ | .+.... ..
T Consensus 423 g~~g~~G~~l~~AiGaala-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~~ 495 (568)
T 2c31_A 423 GTWGVMGIGMGYCVAAAAV-----TGKPVIAVEGDSAFGFS--GMELETICRYNLPVTVIIMNNGGIYKGNEADPQPGVI 495 (568)
T ss_dssp TTTTCSSCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEESSBSSCSCCCCSBTTBC
T ss_pred CCCccccccHHHHHHHHhC-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHhhcCCc
Confidence 5679999999999999998 46789999999998863 5669999999999877777665 4 442211 00
Q ss_pred ---cccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeec
Q 016175 241 ---AAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (394)
Q Consensus 241 ---~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~ 293 (394)
....++|.+++ +| +++++|+ ++.++.+++++|++. +||+|||+.|.|.
T Consensus 496 ~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~~p~liev~~~~~ 548 (568)
T 2c31_A 496 SCTRLTRGRYDMMMEAFGGKGYVAN--TPAELKAALEEAVAS---GKPCLINAMIDPD 548 (568)
T ss_dssp CTTBCCCCCHHHHHHTTTCEEEEES--SHHHHHHHHHHHHHH---TSCEEEEEEBCTT
T ss_pred ccCcCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEeccc
Confidence 02345788877 56 8999996 588999988888743 8999999999864
No 42
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=99.40 E-value=8.7e-13 Score=138.25 Aligned_cols=117 Identities=17% Similarity=0.194 Sum_probs=89.9
Q ss_pred cCCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCC-c-cccccc----c
Q 016175 166 YGGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-Y-GMGTAE----W 239 (394)
Q Consensus 166 ~~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~-~-~i~~~~----~ 239 (394)
.++.|++|+++|.|+|+++| +++.|||++|||++++. +++|++|+++++|+++||.||+ | ++.... .
T Consensus 417 ~g~~g~~G~~l~~AiGaa~a-----~~~~vv~i~GDGsf~~~--~~el~ta~~~~l~~~ivv~NN~~~~~~~~~~~~~~~ 489 (564)
T 2q28_A 417 CGTWGVMGIGMGYAIGASVT-----SGSPVVAIEGDSAFGFS--GMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAG 489 (564)
T ss_dssp STTTTCTTCHHHHHHHHHHH-----HCSCEEEEEEHHHHHTT--GGGHHHHHHTTCCEEEEEEECSBSSCSCCCCTTSSC
T ss_pred CCCCCcccchHHHHHHHhhc-----CCCcEEEEEcchHhhcc--HHHHHHHHHhCCCeEEEEEeCchhHHHHHHHHhccC
Confidence 35679999999999999998 46789999999999764 4669999999999877776665 4 542211 0
Q ss_pred c-----cccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeecC
Q 016175 240 R-----AAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRYH 294 (394)
Q Consensus 240 ~-----~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~~ 294 (394)
. ....++|.+++ +| +++++|+ ++.++.+++++|++. +||+|||+.|.|..
T Consensus 490 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~~p~liev~~~~~~ 546 (564)
T 2q28_A 490 APSPTDLLHHARYDKLMDAFRGVGYNVT--TTDELRHALTTGIQS---RKPTIINVVIDPAA 546 (564)
T ss_dssp CCCTTBCCTTCCGGGGGGGGTCEEEEEC--SHHHHHHHHHHHHHH---TSCEEEEEEBCTTS
T ss_pred CccccccCCCCCHHHHHHHcCCeEEEeC--CHHHHHHHHHHHHhC---CCCEEEEEEecccc
Confidence 0 11235788877 55 8899996 588998988888743 89999999998753
No 43
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=99.33 E-value=6.1e-13 Score=139.42 Aligned_cols=113 Identities=20% Similarity=0.202 Sum_probs=80.4
Q ss_pred CCcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCC-ccccccc-------
Q 016175 167 GGHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAE------- 238 (394)
Q Consensus 167 ~~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~-~~i~~~~------- 238 (394)
++.|++|. +|.|+|+++|. ++.|||++|||++++. + .+|++|+.+++|+++||.||+ |+|....
T Consensus 414 g~~g~~G~-l~~A~Gaa~a~-----~~~vv~i~GDGsf~~~-~-~eL~ta~~~~lpv~ivv~NN~~~~~~~~~~~~~~~~ 485 (556)
T 3hww_A 414 GASGIDGL-LSTAAGVQRAS-----GKPTLAIVGDLSALYD-L-NALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSER 485 (556)
T ss_dssp SSCCSSSH-HHHHHHHHHHH-----CCCEEEEEEHHHHHHT-G-GGHHHHTTCSSCEEEEEEESCC--------------
T ss_pred cccccccH-HHHHHHHHhcC-----CCcEEEEEccHHhhhc-c-hhhHhhcccCCCcEEEEEECCCCCcccCCCCcchhH
Confidence 45677788 99999999982 5789999999998764 3 449999999999877777665 6764321
Q ss_pred cc---cccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 239 WR---AAKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 239 ~~---~~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
.. ....++|.+.+ +| +++++|+ +..++.+++++|++. +||+|||+.|.+
T Consensus 486 ~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~~l~~al~~a~~~---~gp~liev~~~~ 539 (556)
T 3hww_A 486 ERFYLMPQNVHFEHAAAMFELKYHRPQ--NWQELETAFADAWRT---PTTTVIEMVVND 539 (556)
T ss_dssp ---CCCCCCCCSHHHHHHTTCEEECCS--SHHHHHHHHHHHTTS---SSEEEEEEECCS
T ss_pred HHhccCCCCCCHHHHHHHcCCcEEecC--CHHHHHHHHHHHHhC---CCCEEEEEECCc
Confidence 11 12346788876 55 8899997 466777777665532 899999999853
No 44
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=99.31 E-value=5.1e-13 Score=141.30 Aligned_cols=113 Identities=16% Similarity=0.108 Sum_probs=84.9
Q ss_pred CcCCccchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEE-EcCCcccccccc-------
Q 016175 168 GHGIVGAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC-ENNHYGMGTAEW------- 239 (394)
Q Consensus 168 ~~g~lG~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv-~NN~~~i~~~~~------- 239 (394)
+.+.+|.++|.|+|+++|. ++.|||++|||+++++ + ++|++|+.+++|+++|| +||+|+|.....
T Consensus 453 G~~~ig~~l~~AiGaala~-----~~~vv~i~GDGsf~~~-~-~eL~ta~~~~lp~~ivv~NN~~~~i~~~~~~~q~~~~ 525 (604)
T 2x7j_A 453 GANGIDGVVSSAMGVCEGT-----KAPVTLVIGDLSFYHD-L-NGLLAAKKLGIPLTVILVNNDGGGIFSFLPQASEKTH 525 (604)
T ss_dssp TTCCSSSHHHHHHHHHHHH-----TSCEEEEEEHHHHHHT-G-GGGHHHHHHCCCEEEEEEECSSCGGGGGSGGGSCHHH
T ss_pred CcCCcCcHHHHHHHHHhcC-----CCcEEEEEccHHHHhH-H-HHHHHhhhcCCCeEEEEEeCCCCcccccCCCCccchh
Confidence 3578899999999999994 5789999999999885 3 55999999999976555 566799743211
Q ss_pred --cc---ccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeee
Q 016175 240 --RA---AKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYR 292 (394)
Q Consensus 240 --~~---~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R 292 (394)
+. ...++|.+++ +| +++++|+ ++.++.+++++|++ .+||+|||+.|.|
T Consensus 526 ~~~~~~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~---~~gp~liev~~~~ 580 (604)
T 2x7j_A 526 FEDLFGTPTGLDFKHAAALYGGTYSCPA--SWDEFKTAYAPQAD---KPGLHLIEIKTDR 580 (604)
T ss_dssp HHHHTTCCCCCCTHHHHHHTTCEEECCS--SHHHHHHHCCCCCS---SCCEEEEEEECCH
T ss_pred hHhhccCCCCCCHHHHHHHcCCeEEecC--CHHHHHHHHHHHHh---CCCCEEEEEECCc
Confidence 11 1235788776 55 8899997 47787777766543 2899999999864
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=99.21 E-value=5.7e-12 Score=132.60 Aligned_cols=108 Identities=19% Similarity=0.142 Sum_probs=72.2
Q ss_pred cchhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC-Cccccccc---c------cc-
Q 016175 173 GAQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAE---W------RA- 241 (394)
Q Consensus 173 G~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN-~~~i~~~~---~------~~- 241 (394)
|.++|.|+|+|+ +++.|||++|||++++. .++|++|+++++|+++||.|| +|+|.... . ..
T Consensus 439 ~g~l~~AiGaa~------~~~~vv~i~GDGsf~~~--~~eL~ta~~~~l~~~ivv~NN~~~g~~~~~~~~~~~~~~~~~~ 510 (578)
T 3lq1_A 439 DGVVSSALGASV------VFQPMFLLIGDLSFYHD--MNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLF 510 (578)
T ss_dssp SSHHHHHHHHTT------TSSSEEEEEEHHHHHHT--GGGGHHHHHTTCCEEEEEECCC---------------------
T ss_pred ccHHHHHHHHhc------CCCCEEEEEchHHHHhh--HHHHHhhccCCCCeEEEEEECCcCccccccccccccchhhhhc
Confidence 337999999863 36789999999998764 455999999999987766666 68875421 0 00
Q ss_pred --ccCcchhhhc-Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhhCCCEEEEEEeeec
Q 016175 242 --AKSPSYYKRG-DY-VPGLKVDGMDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (394)
Q Consensus 242 --~~~~~~~~~g-~~-~~~~~VDG~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~ 293 (394)
...++|.+.+ +| +++++|+ +.+++.+++++|++. +||+|||+.|.+.
T Consensus 511 ~~~~~~d~~~~a~a~G~~~~~v~--~~~el~~al~~a~~~---~gp~liev~~~~~ 561 (578)
T 3lq1_A 511 GTSTELDFRFAAAFYDADYHEAK--SVDELEEAIDKASYH---KGLDIIEVKTNRH 561 (578)
T ss_dssp ----CCCTHHHHHHTTCEEEECC--SHHHHHHHHHHHTTS---SSEEEEEEC----
T ss_pred cCCCCCCHHHHHHHcCCceEecC--CHHHHHHHHHHHHhC---CCCEEEEEECCcc
Confidence 1235787776 55 8899996 577888877776542 8999999998653
No 46
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=98.60 E-value=1.2e-07 Score=107.48 Aligned_cols=97 Identities=13% Similarity=0.064 Sum_probs=70.2
Q ss_pred CCeEEEEEccc-ccccchHHHHHHHHHHCCCCeEEEEEcC-Ccccccccccc----------------ccCcchhhhc-C
Q 016175 192 ETVTFALYGDG-AANQGQLFEALNIAALWDLPAILVCENN-HYGMGTAEWRA----------------AKSPSYYKRG-D 252 (394)
Q Consensus 192 ~~~vv~l~GDG-a~~eG~~~Ealn~Aa~~~LpvI~vv~NN-~~~i~~~~~~~----------------~~~~~~~~~g-~ 252 (394)
++.|||+.||| ++..| +.| |..|..+++|+++||.|| .|++...+... ...+||...+ +
T Consensus 953 ~~~Vv~i~GDG~~~~mg-~~e-L~ta~~~~~~v~iiVlnN~~yg~tg~Q~s~~t~~~~~t~~~~~g~~~~~~D~~~iA~a 1030 (1231)
T 2c42_A 953 KKSVWIFGGDGWAYDIG-YGG-LDHVLASGEDVNVFVMDTEVYSNTGGQSSKATPTGAVAKFAAAGKRTGKKDLARMVMT 1030 (1231)
T ss_dssp CCEEEEEEEHHHHHTTT-HHH-HHHHHHTTCSCEEEEEECSSBTTTTCBCCTTSCTTCCBBTBTTCCSSCCCCHHHHHHT
T ss_pred CCcEEEEeCcHHHHHcc-hHH-HHHHHHhCCCeEEEEEECHHHHhHHhhhccCCCCCceeeecccCCCCCchhHHHHHHH
Confidence 47899999999 77877 444 889999999986666655 48875422110 0124777776 5
Q ss_pred c-ccEEE-EeC-CCHHHHHHHHHHHHHHHhhCCCEEEEEEeeec
Q 016175 253 Y-VPGLK-VDG-MDALAVKQACKFAKEHALKNGPMILEMDTYRY 293 (394)
Q Consensus 253 ~-~~~~~-VDG-~D~~av~~a~~~A~~~ar~~gP~lIe~~t~R~ 293 (394)
| ++++. +.- .++.++..++++|+++ +||+||++.+.--
T Consensus 1031 ~G~~~va~~~v~~~~~~l~~al~eAl~~---~GP~lI~v~~~c~ 1071 (1231)
T 2c42_A 1031 YGYVYVATVSMGYSKQQFLKVLKEAESF---PGPSLVIAYATCI 1071 (1231)
T ss_dssp TSSSEEEEECTTTCHHHHHHHHHHHHHS---SSCEEEEEECCCG
T ss_pred CCCCEEEEEeccCCHHHHHHHHHHHHhc---CCCEEEEEeecCc
Confidence 5 77775 433 4899999999999875 9999999996443
No 47
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=89.79 E-value=1.4 Score=46.40 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=64.4
Q ss_pred hhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCccccccccccccCcchhhhcCccc
Q 016175 176 IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVP 255 (394)
Q Consensus 176 lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~~~~~g~~~~ 255 (394)
+++|+|+|++ |...++++.++++.. ..++.+.+++..++|+++++.+.+++.+.....+.+..++.-+. .+|
T Consensus 368 v~~a~G~A~~----G~~~~~~~~f~~Fl~---~a~dqi~~~a~~~~~v~~v~~~~g~~~G~dG~tH~~~ed~a~l~-~iP 439 (616)
T 3mos_A 368 VSIAVGCATR----NRTVPFCSTFAAFFT---RAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFR-SVP 439 (616)
T ss_dssp HHHHHHHHGG----GCCEEEEEEEGGGGG---GGHHHHHHHHHTTCCEEEEEESBSGGGCTTCGGGCBSSHHHHHH-TST
T ss_pred HHHHHHHHHc----CCCCEEEEehHHHHH---HHHHHHHHHHHhCCCeEEEEECCCccccCCCCcccCHHHHHHhc-CCC
Confidence 4566676654 222466778999974 46788888899999999988877765432111111111222111 267
Q ss_pred EEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 256 GLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 256 ~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
++.| .=.|+.++..+++.|++. ++|++|-.
T Consensus 440 ~l~V~~P~d~~e~~~~l~~a~~~---~gp~~ir~ 470 (616)
T 3mos_A 440 TSTVFYPSDGVATEKAVELAANT---KGICFIRT 470 (616)
T ss_dssp TEEEECCCSHHHHHHHHHHHHTC---CSEEEEEC
T ss_pred CCEEEecCCHHHHHHHHHHHHhc---CCCEEEEE
Confidence 7765 556888888888877753 88987743
No 48
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=87.10 E-value=3.1 Score=44.25 Aligned_cols=100 Identities=19% Similarity=0.187 Sum_probs=63.0
Q ss_pred hHHHHHHHHhhhCC-CCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcccc--ccccccccCcchhhhcCc
Q 016175 177 PLGCGLAFAQKYSK-DETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSPSYYKRGDY 253 (394)
Q Consensus 177 p~A~G~A~A~k~~~-~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~--~~~~~~~~~~~~~~~g~~ 253 (394)
++|+|+|+. | .-++++..+...+. -.++++.+++..++|+|+++...+++.+ .++. +. ..++.-+. .
T Consensus 428 ~~a~GlA~~----G~~~~P~~~t~~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~tH-q~-~edla~lr-~ 497 (675)
T 1itz_A 428 AICNGIALH----SPGFVPYCATFFVFTD---YMRGAMRISALSEAGVIYVMTHDSIGLGEDGPTH-QP-IEHLVSFR-A 497 (675)
T ss_dssp HHHHHHHTT----CTTCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-CC-SSHHHHHH-S
T ss_pred HHHHHHHhc----CCCCEEEEEEHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCCCCc-Cc-HHHHHHhc-c
Confidence 466666643 3 13566666766553 4577888999999999999977776643 2222 11 11222221 2
Q ss_pred ccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 254 VPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 254 ~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
+|++.| .=-|..++..+++.|++. .++|++|-.
T Consensus 498 iP~l~V~~Pad~~e~~~~l~~a~~~--~~~Pv~i~~ 531 (675)
T 1itz_A 498 MPNILMLRPADGNETAGAYKVAVLN--RKRPSILAL 531 (675)
T ss_dssp SSSCEEECCCSHHHHHHHHHHHHHC--TTSCEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHh--CCCcEEEEe
Confidence 666655 446788888889888863 278999954
No 49
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=86.28 E-value=2.8 Score=44.47 Aligned_cols=108 Identities=16% Similarity=0.195 Sum_probs=66.1
Q ss_pred cCCccch-hhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcccc--ccccccccCc
Q 016175 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSP 245 (394)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~--~~~~~~~~~~ 245 (394)
.|+-.++ +++|+|+|+. +.-++++..+...+. -.++++.+++..++|+++++.+.+++.+ .++. + +..
T Consensus 407 ~GIaE~~~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~~~G~dG~tH-q-~~e 477 (669)
T 2r8o_A 407 YGVREFGMTAIANGISLH----GGFLPYTSTFLMFVE---YARNAVRMAALMKQRQVMVYTHDSIGLGEDGPTH-Q-PVE 477 (669)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---TTHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTT-C-CSS
T ss_pred cchhHHHHHHHHHHHHHc----CCCeEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCCcCcCCCCCcc-C-CHH
Confidence 3444443 3467777764 122455666666543 3467788899999999999988777643 2222 1 111
Q ss_pred chhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 246 ~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
++..+. .+|++.| .=-|..++..+++.|++. .++|++|-.
T Consensus 478 dla~lr-~iP~l~V~~Pad~~E~~~~l~~a~~~--~~~Pv~i~~ 518 (669)
T 2r8o_A 478 QVASLR-VTPNMSTWRPCDQVESAVAWKYGVER--QDGPTALIL 518 (669)
T ss_dssp HHHHHH-TSTTCEEECCSSHHHHHHHHHHHHHC--SSSCEEEEC
T ss_pred HHHHhc-CCCCCEEEecCCHHHHHHHHHHHHHh--CCCcEEEEe
Confidence 222221 1566554 456788888899888863 278999853
No 50
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=86.22 E-value=2.3 Score=44.70 Aligned_cols=102 Identities=14% Similarity=0.199 Sum_probs=63.2
Q ss_pred hhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHH-HHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhhcC
Q 016175 175 QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFE-ALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGD 252 (394)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~E-aln~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~g~ 252 (394)
.+++|+|+|++ .-++++.++++... ..+| .++.++..++|+++++.+.++. -..++.. ...++.-+.
T Consensus 373 ~~~~a~G~A~~-----G~rp~~~~~~~F~~---~a~dqi~~~~a~~~~pvv~~~~~~g~~g~~G~tH~--~~~d~~~~~- 441 (621)
T 2o1s_A 373 AVTFAAGLAIG-----GYKPIVAIYSTFLQ---RAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQ--GAFDLSYLR- 441 (621)
T ss_dssp HHHHHHHHHHT-----TCEEEEEEETTGGG---GGHHHHHHTTTTTTCCCEEEEESCBCCCTTCGGGC--BCSHHHHTT-
T ss_pred HHHHHHHHHHC-----CCEEEEEehHhHHH---HHHHHHHHHHHhcCCCEEEEEECCccCCCCCCccC--chHHHHHHh-
Confidence 34577777764 24577777888752 3444 3677889999999999876652 1112111 112222221
Q ss_pred cccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEEE
Q 016175 253 YVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (394)
Q Consensus 253 ~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (394)
.+|++.| .=-|+.+++..++.|++. .++|++|-..
T Consensus 442 ~iP~l~v~~P~d~~e~~~~l~~a~~~--~~~Pv~i~~~ 477 (621)
T 2o1s_A 442 CIPEMVIMTPSDENECRQMLYTGYHY--NDGPSAVRYP 477 (621)
T ss_dssp TSTTCEEECCSSHHHHHHHHHHHHHC--CSSCEEEECC
T ss_pred cCCCCEEEecCCHHHHHHHHHHHHHc--CCCCEEEEeC
Confidence 1555544 556888999999988863 2789988654
No 51
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=86.20 E-value=0.73 Score=45.74 Aligned_cols=112 Identities=21% Similarity=0.188 Sum_probs=60.3
Q ss_pred chhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCC-cccc--cccccc-ccCcchhh
Q 016175 174 AQIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMG--TAEWRA-AKSPSYYK 249 (394)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~-~~i~--~~~~~~-~~~~~~~~ 249 (394)
..+..|+|++++- .+.++...|.|-.. ..|.|..++..++|+|+++-+.. .+.+ +..+.. .....|..
T Consensus 75 ~a~~~a~Gaa~aG-----~r~~~~ts~~G~~~---~~d~l~~aa~~~~P~Vi~~~~~~~~~~g~~~~~~~sd~~~~~~~~ 146 (395)
T 1yd7_A 75 ASIAAAIGASWAG-----AKAMTATSGPGFSL---MQENIGYAVMTETPVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGT 146 (395)
T ss_dssp HHHHHHHHHHHTT-----CCEEEEEETTHHHH---HTTTCC----CCCCEEEEEEC------------------------
T ss_pred HHHHHHHHHHHhC-----CcEEEEeCchHHHH---HHHHHHHHHhcCCCEEEEEeeCCCCCCCCCcccchhHHHHHHhcc
Confidence 3455666766653 35677788988754 35566667788999877776543 3322 211110 00011222
Q ss_pred hcC-cccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEeeecCCCC
Q 016175 250 RGD-YVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHS 297 (394)
Q Consensus 250 ~g~-~~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs 297 (394)
.|. .++.+ .-.++.+++..+..|++.+++ +.|+++....+- +|+
T Consensus 147 ~g~~g~~vl--~p~~~qea~~l~~~A~~lA~~~~~PVi~~~~~~l--~h~ 192 (395)
T 1yd7_A 147 HGDHSLIVL--SPSTVQEAFDFTIRAFNLSEKYRTPVILLTDAEV--GHM 192 (395)
T ss_dssp --CCCCEEE--CCCSHHHHHHHHHHHHHHHHHHTSEEEEEECHHH--HHC
T ss_pred CCCcceEEE--eCCCHHHHHHHHHHHHHHHHHHCCCEEEEcchhH--hCe
Confidence 222 24333 445789999999999988877 899999888652 555
No 52
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=86.08 E-value=3.5 Score=43.74 Aligned_cols=110 Identities=17% Similarity=0.147 Sum_probs=68.0
Q ss_pred CcCCccc-hhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCccccccccccccCcc
Q 016175 168 GHGIVGA-QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPS 246 (394)
Q Consensus 168 ~~g~lG~-~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~ 246 (394)
..|+-.+ .+++|+|+|+. +.-++++..+.+-.. ..++++.+++..++||+|+....+++.+.......+..+
T Consensus 407 d~GIaE~~~v~~a~GlA~~----gG~~P~~~tf~~F~~---~~~~~ir~~a~~~lpvv~~~t~~g~g~G~dG~THq~~ed 479 (663)
T 3kom_A 407 SYGVREFGMAAIMNGLSLY----GGIKPYGGTFLVFSD---YSRNAIRMSALMKQPVVHVMSHDSIGLGEDGPTHQPIEH 479 (663)
T ss_dssp ECCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHTTCCCEEEEECCSGGGCTTCTTTCCSSH
T ss_pred ecCccHHHHHHHHHHHHHc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCCcCCHHH
Confidence 3455555 45677888875 123466666776652 356778889999999999987777654321111111112
Q ss_pred hhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEE
Q 016175 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (394)
Q Consensus 247 ~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (394)
++-+. .+|++.| -=-|..++..+++.|++. .++|++|-
T Consensus 480 ~a~lr-~iPnl~V~~Pad~~e~~~~l~~A~~~--~~~Pv~ir 518 (663)
T 3kom_A 480 VPSLR-LIPNLSVWRPADTIETMIAWKEAVKS--KDTPSVMV 518 (663)
T ss_dssp HHHHH-TSTTCEEECCCSHHHHHHHHHHHHHC--SSCCEEEE
T ss_pred HHHHh-cCCCcEEEeeCCHHHHHHHHHHHHHh--CCCCEEEE
Confidence 22211 2666554 345788888888888861 28999984
No 53
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=86.06 E-value=3.1 Score=44.59 Aligned_cols=107 Identities=21% Similarity=0.216 Sum_probs=66.3
Q ss_pred CcCCccch-hhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcccc--ccccccccC
Q 016175 168 GHGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKS 244 (394)
Q Consensus 168 ~~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~--~~~~~~~~~ 244 (394)
..|+-.++ +++|+|+|+.. .-++++..+.+=. + ..+..+.+++..++||+|+....+++.+ .++. .+.
T Consensus 452 d~GIaE~~mv~~AaGlA~~~----G~~Pv~~~f~~F~--~-~~~~~ir~~a~~~lpv~~v~thdg~gvG~dG~TH--q~~ 522 (711)
T 3uk1_A 452 NYGVREFGMSAAINGLVLHG----GYKPFGGTFLTFS--D-YSRNALRVAALMKVPSIFVFTHDSIGLGEDGPTH--QSV 522 (711)
T ss_dssp ECCSCHHHHHHHHHHHHHHS----SCEEEEEEEGGGH--H-HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--CCS
T ss_pred EeCccHHHHHHHHHHHHHcC----CCEEEEEEhHHHH--H-HHHHHHHHhhhcCCCEEEEEECCCcCcCCCCCcc--CCh
Confidence 34555554 56788888631 2245555554433 2 3456788889999999999987776543 2222 111
Q ss_pred cchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEE
Q 016175 245 PSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (394)
Q Consensus 245 ~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (394)
.+++-+. .+|++.| .=-|..++..+++.|++. ++|++|-
T Consensus 523 ed~a~lr-~iPnl~V~~Pad~~E~~~~l~~Ai~~---~~Pv~ir 562 (711)
T 3uk1_A 523 EHVASLR-LIPNLDVWRPADTVETAVAWTYAVAH---QHPSCLI 562 (711)
T ss_dssp SHHHHHH-TSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEE
T ss_pred hHHHHHh-cCCCCEEEecCCHHHHHHHHHHHHhc---CCCEEEE
Confidence 1222211 2676655 446788888889888863 8999984
No 54
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=85.22 E-value=1.4 Score=42.76 Aligned_cols=100 Identities=19% Similarity=0.125 Sum_probs=59.4
Q ss_pred chhhHHHHHHHHhhhCCCCCeEEE-EEcccccccchHHHHHHHHH---------HCCCCeEEEEEcCCc-cccccccccc
Q 016175 174 AQIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALNIAA---------LWDLPAILVCENNHY-GMGTAEWRAA 242 (394)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~-l~GDGa~~eG~~~Ealn~Aa---------~~~LpvI~vv~NN~~-~i~~~~~~~~ 242 (394)
..+++|+|+|++- -++++. .++|.. + ..++.+...+ ..++|+++++.+ ++ +-..++..+.
T Consensus 73 ~~v~~a~G~A~~G-----~rp~~~~~f~~F~-~--~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~-G~~g~~G~tHs~~ 143 (341)
T 2ozl_B 73 GFAGIAVGAAMAG-----LRPICEFMTFNFS-M--QAIDQVINSAAKTYYMSGGLQPVPIVFRGPN-GASAGVAAQHSQC 143 (341)
T ss_dssp HHHHHHHHHHHTT-----CEEEEECSSGGGG-G--GGHHHHHTTTTTHHHHTTSSCCCCCEEEEEC-SCCSSCCGGGCCC
T ss_pred HHHHHHHHHHHCC-----CEEEEEeccHHHH-H--HHHHHHHHHHHHHHhhccccCCCCEEEEEcC-cCCCCCCcchhhH
Confidence 3456777877652 234444 488887 2 4566666544 389999999885 43 2111222111
Q ss_pred cCcchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEEE
Q 016175 243 KSPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (394)
Q Consensus 243 ~~~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (394)
.+ ..-..+|++.| .=.|+.+++..++.|++. ++|++|-..
T Consensus 144 --~e--a~l~~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~~~ 184 (341)
T 2ozl_B 144 --FA--AWYGHCPGLKVVSPWNSEDAKGLIKSAIRD---NNPVVVLEN 184 (341)
T ss_dssp --CH--HHHHTSTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEEEC
T ss_pred --HH--HHhccCCCCEEEEeCCHHHHHHHHHHHHhc---CCCEEEEEC
Confidence 11 11111555544 556899999999988764 899988654
No 55
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=84.85 E-value=3.4 Score=43.60 Aligned_cols=110 Identities=15% Similarity=0.068 Sum_probs=67.7
Q ss_pred CcCCccch-hhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCccccccccccccCcc
Q 016175 168 GHGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPS 246 (394)
Q Consensus 168 ~~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~ 246 (394)
..|+-.++ +++|+|+|+. +.-++++..+.+-.. ..++.+.+++..++||+|+....+++.+.......+..+
T Consensus 386 d~GIaE~~~v~~a~GlA~~----gG~~P~~~~f~~F~~---~~~~~ir~~a~~~~pv~~~~t~~g~g~G~dG~THq~~ed 458 (632)
T 3l84_A 386 HFGIREHAMAAINNAFARY----GIFLPFSATFFIFSE---YLKPAARIAALMKIKHFFIFTHDSIGVGEDGPTHQPIEQ 458 (632)
T ss_dssp ECCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGHH---HHHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGSCSSH
T ss_pred EeCccHHHHHHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHHhccCCCEEEEEECCCcCCCCCCCCCCCHhH
Confidence 34555443 4677888875 123456666665542 356778889999999999988777654321111111112
Q ss_pred hhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 247 ~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
++-+. .+|++.| -=-|..++..+++.|++. ++|++|-.
T Consensus 459 ~a~lr-~iP~l~V~~P~d~~e~~~~l~~A~~~---~~Pv~ir~ 497 (632)
T 3l84_A 459 LSTFR-AMPNFLTFRPADGVENVKAWQIALNA---DIPSAFVL 497 (632)
T ss_dssp HHHHH-HSSSCEEECCSSHHHHHHHHHHHHHC---SSCEEEEC
T ss_pred HHHHh-cCCCCEEEecCCHHHHHHHHHHHHhC---CCCEEEEE
Confidence 22111 2666655 445788888889888863 89998854
No 56
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=84.40 E-value=3.2 Score=44.14 Aligned_cols=108 Identities=19% Similarity=0.209 Sum_probs=65.7
Q ss_pred cCCccchh-hHHHHHHHHhhhCCCCC-eEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcccc--ccccccccC
Q 016175 169 HGIVGAQI-PLGCGLAFAQKYSKDET-VTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKS 244 (394)
Q Consensus 169 ~g~lG~~l-p~A~G~A~A~k~~~~~~-~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~--~~~~~~~~~ 244 (394)
.|+-.+++ ++|+|+|+. |.-+ +++..+.+-+. -.++++.+++..++||+|++...+++.+ .++. +. .
T Consensus 414 ~gIaE~~~vg~a~GlA~~----Gg~~~P~~~~f~~F~~---~~~~air~~a~~~lpvv~v~t~~g~g~G~dG~tH-q~-~ 484 (680)
T 1gpu_A 414 YGIREHAMGAIMNGISAF----GANYKPYGGTFLNFVS---YAAGAVRLSALSGHPVIWVATHDSIGVGEDGPTH-QP-I 484 (680)
T ss_dssp CCSCHHHHHHHHHHHHHH----CTTCEEEEEEEHHHHG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-CC-S
T ss_pred CCccHHHHHHHHHHHHhc----CCCceEEEeehHHHHH---HHHHHHHHHHhcCCCEEEEEeCCccccCCCCCcc-CC-H
Confidence 44544433 477787764 2124 55566655432 2466788899999999999877776643 2222 11 1
Q ss_pred cchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 245 PSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 245 ~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
.+.+-+. .+|++.| -=-|..++..+++.|++. .++|++|-.
T Consensus 485 edla~lr-~iP~l~V~~Pad~~e~~~~l~~A~~~--~~~Pv~i~~ 526 (680)
T 1gpu_A 485 ETLAHFR-SLPNIQVWRPADGNEVSAAYKNSLES--KHTPSIIAL 526 (680)
T ss_dssp SHHHHHH-TSSSCEEECCCSHHHHHHHHHHHHHC--SSCCEEEEC
T ss_pred HHHHHhc-CCCCCEEEecCCHHHHHHHHHHHHHh--CCCcEEEEe
Confidence 1222221 2666655 445788888889888863 278999853
No 57
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=84.19 E-value=1.4 Score=42.66 Aligned_cols=100 Identities=13% Similarity=0.010 Sum_probs=59.0
Q ss_pred chhhHHHHHHHHhhhCCCCCeEEE--EEcccccccchHHHHHH-HHHH--------CCCCeEEEEEcCCccccccccccc
Q 016175 174 AQIPLGCGLAFAQKYSKDETVTFA--LYGDGAANQGQLFEALN-IAAL--------WDLPAILVCENNHYGMGTAEWRAA 242 (394)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~--l~GDGa~~eG~~~Ealn-~Aa~--------~~LpvI~vv~NN~~~i~~~~~~~~ 242 (394)
+.+++|+|+|++- .++++ .++++. + ..++.+. .++. +++|+++++.+.+...+....
T Consensus 63 ~~~~~a~G~A~~G------~rp~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g~~~G~th~--- 130 (338)
T 1qs0_B 63 GIVGTAVGMGAYG------LRPVVEIQFADYF-Y--PASDQIVSEMARLRYRSAGEFIAPLTLRMPCGGGIYGGQTH--- 130 (338)
T ss_dssp HHHHHHHHHHHHT------CEEEEECSCGGGC-G--GGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECCSSSCCSSS---
T ss_pred HHHHHHHHHHhCC------CEEEEEeccHhHH-H--HHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCCCCCCcccc---
Confidence 4556788888762 34555 499987 2 4566654 2433 359999988765522221111
Q ss_pred cCcchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEEE
Q 016175 243 KSPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (394)
Q Consensus 243 ~~~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (394)
+..+..-+. .+|++.| .=.|+.+++..++.|++. ++|++|-..
T Consensus 131 s~~d~~~l~-~iP~l~V~~Psd~~e~~~~l~~A~~~---~~Pv~i~~p 174 (338)
T 1qs0_B 131 SQSPEAMFT-QVCGLRTVMPSNPYDAKGLLIASIEC---DDPVIFLEP 174 (338)
T ss_dssp SCCCHHHHT-TSTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEEEE
T ss_pred cccHHHHHh-cCCCCEEEeeCCHHHHHHHHHHHHhc---CCcEEEEEc
Confidence 111332222 1444433 556899999999988864 899998543
No 58
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=84.19 E-value=2 Score=45.13 Aligned_cols=101 Identities=17% Similarity=0.260 Sum_probs=62.5
Q ss_pred hhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHH-HHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhhcC
Q 016175 175 QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFE-ALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGD 252 (394)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~E-aln~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~g~ 252 (394)
.+++|+|+|++ .-++++.++.+... ..+| .++.++..++|+++++.+.++. -..++.. ...+..-+.
T Consensus 376 ~~~~a~G~A~~-----G~rp~~~~~~~F~~---~a~dqi~~~~a~~~~pvv~~~~~~g~~g~dG~tH~--~~~d~a~~r- 444 (629)
T 2o1x_A 376 AVTTAAGMALQ-----GMRPVVAIYSTFLQ---RAYDQVLHDVAIEHLNVTFCIDRAGIVGADGATHN--GVFDLSFLR- 444 (629)
T ss_dssp HHHHHHHHHHT-----TCEEEEEEEHHHHG---GGHHHHHHTTTTTTCCCEEEEESBBCCCTTCTTTC--BCSHHHHTT-
T ss_pred HHHHHHHHHHc-----CCEEEEEecHHHHH---HHHHHHHHHHhhcCCCEEEEEECCccCCCCCcccC--ccHHHHHHH-
Confidence 34577777765 23566777777642 3444 3677889999999999876642 1111111 111222111
Q ss_pred cccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEEE
Q 016175 253 YVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (394)
Q Consensus 253 ~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (394)
.+|++.| .=-|+.+++..++.|++. ++|++|-..
T Consensus 445 ~iP~l~v~~P~d~~e~~~~~~~a~~~---~~Pv~i~~~ 479 (629)
T 2o1x_A 445 SIPGVRIGLPKDAAELRGMLKYAQTH---DGPFAIRYP 479 (629)
T ss_dssp TSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEECC
T ss_pred ccCCcEEEecCCHHHHHHHHHHHHhC---CCCEEEEec
Confidence 1555544 556889999999998865 899998654
No 59
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=84.10 E-value=7.1 Score=40.40 Aligned_cols=103 Identities=17% Similarity=0.095 Sum_probs=64.5
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhhcCc-cc
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKRGDY-VP 255 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~g~~-~~ 255 (394)
.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-... ++.....+. .+...+..+ -.
T Consensus 58 ~A~GyAr~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~Q~--~d~~~~~~~tk~ 129 (589)
T 2pgn_A 58 MVNGYNYVK---DRSAAVGAWHCVGNLL---LHAAMQEARTGRIPAVHIGLNSDGRLAGRSEAAQQ--VPWQSFTPIARS 129 (589)
T ss_dssp HHHHHHHHH---TSCCEEEEEEGGGGGG---CHHHHHHHHHTTCCEEEEEEESCGGGTTCTTCSSC--CCGGGGTTTSSE
T ss_pred HHHHHHHHH---CCCEEEEEecCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCCCCcccc--cChhhccccEEE
Confidence 566666543 4556889999999987 3456777889999998888764322 221101111 122223322 21
Q ss_pred EEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEe
Q 016175 256 GLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (394)
Q Consensus 256 ~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (394)
..+| .+++.+.+.+.+|+..+.. .||+.|++-.
T Consensus 130 ~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 164 (589)
T 2pgn_A 130 TQRV--ERLDKVGEAIHEAFRVAEGHPAGPAYVDIPF 164 (589)
T ss_dssp EEEC--CSGGGHHHHHHHHHHHHTSSSCCEEEEEEET
T ss_pred Eeec--CCHHHHHHHHHHHHHHHhcCCCccEEEEeCH
Confidence 2444 4677788888888888876 4899998864
No 60
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=83.43 E-value=1.6 Score=42.92 Aligned_cols=99 Identities=17% Similarity=0.027 Sum_probs=53.2
Q ss_pred hhhHHHHHHHHhhhCCCCCeEEEE-EcccccccchHHHHHHH-HHHC--------CCCeEEEEEcCCccccccccccccC
Q 016175 175 QIPLGCGLAFAQKYSKDETVTFAL-YGDGAANQGQLFEALNI-AALW--------DLPAILVCENNHYGMGTAEWRAAKS 244 (394)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~l-~GDGa~~eG~~~Ealn~-Aa~~--------~LpvI~vv~NN~~~i~~~~~~~~~~ 244 (394)
.+++|+|+|++- -++++.+ ++|.. + ..++.+.. ++.. ++|+++++.+.+..-+.++..
T Consensus 110 ~v~~a~G~A~~G-----~rpv~~~tf~~Fl-~--~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs---- 177 (369)
T 1ik6_A 110 ILGFAMGMAMAG-----LKPVAEIQFVDFI-W--LGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHS---- 177 (369)
T ss_dssp HHHHHHHHHHTT-----CEEEEECCCC-------CCHHHHHHHHHHHHC------CCCCEEEEEECC-------------
T ss_pred HHHHHHHHHHCC-----CeeEEEecchhHH-H--HHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCcccc----
Confidence 456777877652 2344444 99987 2 34555544 4433 999999888765221211111
Q ss_pred cchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 245 PSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 245 ~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
..+..+-..+|++.| .=.|+.+++..++.|++. ++|++|-.
T Consensus 178 ~~~~a~l~~iPnl~V~~Psd~~e~~~ll~~A~~~---~~Pv~i~~ 219 (369)
T 1ik6_A 178 NSPEAIFVHTPGLVVVMPSTPYNAKGLLKAAIRG---DDPVVFLE 219 (369)
T ss_dssp --HHHHHHTCTTCEEECCCSHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred ccHHHHHcCCCCcEEEecCCHHHHHHHHHHHHhC---CCCEEEEE
Confidence 111111112555544 556889999999988863 88999853
No 61
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=83.12 E-value=4.1 Score=43.05 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=65.7
Q ss_pred cCCccc-hhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCccccc--cccccccCc
Q 016175 169 HGIVGA-QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSP 245 (394)
Q Consensus 169 ~g~lG~-~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~--~~~~~~~~~ 245 (394)
.|+-.+ .+++|+|+|+. |.-++++..+.=.+. -.++++.+++..++|+|+++.+.+++.+. ++. +. ..
T Consensus 402 ~gIaE~~~~~~a~GlA~~----Gg~~P~~~t~~~F~~---~~~~air~~a~~~lpvv~~~t~~g~g~G~dG~tH-q~-~e 472 (651)
T 2e6k_A 402 FGVREHAMGAILNGLNLH----GGYRAYGGTFLVFSD---YMRPAIRLAALMGVPTVFVFTHDSIALGEDGPTH-QP-VE 472 (651)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GSHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-CC-SS
T ss_pred cCcCHHHHHHHHHHHHHc----CCCEEEEEeHHHHHH---HHHHHHHHHHhcCCCEEEEEECCccccCCCcCcc-cc-HH
Confidence 344433 33577787765 212456665543331 34667888999999999998888876542 222 11 12
Q ss_pred chhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 246 ~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
++..+. .+|++.| .=-|..++..+++.|++. .++|++|-.
T Consensus 473 dla~lr-~iP~l~V~~Pad~~E~~~~l~~A~~~--~~~Pv~i~~ 513 (651)
T 2e6k_A 473 HLMSLR-AMPNLFVIRPADAYETFYAWLVALRR--KEGPTALVL 513 (651)
T ss_dssp HHHHHH-TSTTCEEECCSSHHHHHHHHHHHHHC--CSSCEEEEC
T ss_pred HHHHhc-CCCCcEEEecCCHHHHHHHHHHHHHc--CCCCEEEEE
Confidence 222221 1555544 456788888899888863 268998865
No 62
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=81.26 E-value=5.4 Score=42.34 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=64.4
Q ss_pred cCCccch-hhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcccc--ccccccccCc
Q 016175 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSP 245 (394)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~--~~~~~~~~~~ 245 (394)
.|+-.++ +++|+|+|+. |.-++++.++..-+. -.++++.+++..++|+|+++...+++.+ .++. +. ..
T Consensus 407 ~GIaE~~~~~~a~GlA~~----GG~~P~~~~~~~F~~---~~~~~ir~~a~~~~pvv~~~t~~g~g~G~dG~tH-q~-~e 477 (673)
T 1r9j_A 407 FGVREHAMCAILNGLDAH----DGIIPFGGTFLNFIG---YALGAVRLAAISHHRVIYVATHDSIGVGEDGPTH-QP-VE 477 (673)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT-CC-SS
T ss_pred cCccHHHHHHHHHHHHhc----CCCEEEEEehHHHHH---HHHHHHHHHHhcCCCEEEEEECCccCcCCCCccc-CC-HH
Confidence 3443333 3467777654 222456666644432 3456688899999999999877776643 2222 11 11
Q ss_pred chhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 246 ~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
+.+.+. .+|++.| .=-|..++..+++.|++. .++|++|-.
T Consensus 478 dla~lr-~iP~l~V~~Pad~~e~~~~l~~a~~~--~~~Pv~i~~ 518 (673)
T 1r9j_A 478 LVAALR-AMPNLQVIRPSDQTETSGAWAVALSS--IHTPTVLCL 518 (673)
T ss_dssp HHHHHH-HSTTCEEECCSSHHHHHHHHHHHHHC--TTCCEEEEC
T ss_pred HHHHHc-CCCCCEEEeCCCHHHHHHHHHHHHHh--CCCeEEEEE
Confidence 222211 1666655 456788888888888863 278999854
No 63
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=80.77 E-value=6.4 Score=42.05 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=62.1
Q ss_pred cCCccch-hhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcccc--ccccccccCc
Q 016175 169 HGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMG--TAEWRAAKSP 245 (394)
Q Consensus 169 ~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~--~~~~~~~~~~ 245 (394)
.|+-.++ +++|+|+|+. +.-++++..+..=+. ...-++.+++..++||+|+....+++.+ .++. .+..
T Consensus 437 ~GIaE~~mv~~A~GlA~~----gG~~Pv~~tF~~F~d---~~~~~ir~~al~~lpvv~v~thdg~gvG~dG~TH--q~ie 507 (700)
T 3rim_A 437 FGVREHAMGAILSGIVLH----GPTRAYGGTFLQFSD---YMRPAVRLAALMDIDTIYVWTHDSIGLGEDGPTH--QPIE 507 (700)
T ss_dssp CCSCHHHHHHHHHHHHHH----SSCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCTTT--SCSS
T ss_pred cCccHHHHHHHHHHHHHc----CCCEEEEEecHHHHH---HHHHHHHHhcCCCCCEEEEEeCCCcccCCCCCcc--CChh
Confidence 4444443 4567788875 122344443332221 1233577899999999999987776643 2222 1111
Q ss_pred chhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhC--CCEEEEE
Q 016175 246 SYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKN--GPMILEM 288 (394)
Q Consensus 246 ~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~--gP~lIe~ 288 (394)
+++-+. .+|++.| -=-|..++..+++.|++. .+ +|++|-.
T Consensus 508 d~a~lr-~iPnl~V~~Pad~~e~~~~l~~Ai~~--~~~~~Pv~ir~ 550 (700)
T 3rim_A 508 HLSALR-AIPRLSVVRPADANETAYAWRTILAR--RNGSGPVGLIL 550 (700)
T ss_dssp HHHHHH-TSTTCEEECCSSHHHHHHHHHHHHTT--TTCSSCEEEEC
T ss_pred HHHHHh-cCCCCEEEeCCCHHHHHHHHHHHHHc--cCCCCCEEEEe
Confidence 222221 2666655 335788888888888864 24 7999853
No 64
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=80.31 E-value=5.1 Score=41.32 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=62.0
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhh-cCc-c
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDY-V 254 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~-g~~-~ 254 (394)
.|.|.|.+. +.-.+++|..|=|++| ..=++.-|..-+.|+|+|.-+.... ++.....+. .+.... ..+ -
T Consensus 63 ~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~v~~A~~~~~Pll~itg~~~~~~~~~~~~~Q~--~d~~~~~~~~~k 134 (573)
T 2iht_A 63 AADVLARIT---GRPQACWATLGPGMTN---LSTGIATSVLDRSPVIALAAQSESHDIFPNDTHQC--LDSVAIVAPMSK 134 (573)
T ss_dssp HHHHHHHHH---CSCEEEEECTTHHHHH---HHHHHHHHHHHTCCEEEEEEESCGGGCCTTTSTTC--CCHHHHHGGGSS
T ss_pred HHHHHHHHH---CCCEEEEEccCchHHH---HHHHHHHHHhhCCCEEEEcccCcccccCCcCcccc--CCHHHHHHhHhh
Confidence 555665543 3445666667777776 4556777888999998888764432 222000111 122221 222 1
Q ss_pred cEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEee
Q 016175 255 PGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (394)
Q Consensus 255 ~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t~ 291 (394)
...++ .+++.+.+.+++|+..+.. .||+.|++-.-
T Consensus 135 ~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 171 (573)
T 2iht_A 135 YAVEL--QRPHEITDLVDSAVNAAMTEPVGPSFISLPVD 171 (573)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHTBSSCCCEEEEEEHH
T ss_pred EEEEc--CCHHHHHHHHHHHHHHHhcCCCceEEEEecch
Confidence 12344 4567788888888888776 48999998743
No 65
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=80.24 E-value=4.1 Score=38.98 Aligned_cols=98 Identities=18% Similarity=0.084 Sum_probs=57.4
Q ss_pred chhhHHHHHHHHhhhCCCCCeEEE--EEcccccccchHHHHHHH-HHH--------CCCCeEEEEEcCCcc-cccccccc
Q 016175 174 AQIPLGCGLAFAQKYSKDETVTFA--LYGDGAANQGQLFEALNI-AAL--------WDLPAILVCENNHYG-MGTAEWRA 241 (394)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~--l~GDGa~~eG~~~Ealn~-Aa~--------~~LpvI~vv~NN~~~-i~~~~~~~ 241 (394)
+.+.+|+|+|++ +.++++ .++++. + ..+|.+.. ++. .++|+|+++.. +++ -+.++..+
T Consensus 61 ~~v~~a~G~A~~------G~rp~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g~~hs~ 130 (324)
T 1w85_B 61 GIGGLAIGLALQ------GFRPVPEIQFFGFV-Y--EVMDSICGQMARIRYRTGGRYHMPITIRSPF-GGGVHTPELHSD 130 (324)
T ss_dssp HHHHHHHHHHHT------TCEEEEBCSSGGGG-G--GTHHHHHTTGGGHHHHTTTSSCCCCEEEEEE-CSSSCCCTTSSC
T ss_pred HHHHHHHHHHhC------CCEEEEEecchhHH-H--HHHHHHHHHHHHHhhhccCCCcCCEEEEEec-cCCCCCCCcccc
Confidence 445677787765 234554 388887 2 45666643 333 79999888763 332 22222111
Q ss_pred ccCcchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 242 AKSPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 242 ~~~~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
. +. ..-..+|++.| .=.|+.+.+..++.|+++ ++|++|--
T Consensus 131 --~-~~-a~~~~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~~ 171 (324)
T 1w85_B 131 --S-LE-GLVAQQPGLKVVIPSTPYDAKGLLISAIRD---NDPVIFLE 171 (324)
T ss_dssp --C-CH-HHHTTSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEEE
T ss_pred --c-HH-HHHccCCCCEEEeeCCHHHHHHHHHHHHHc---CCCEEEEe
Confidence 1 12 11112555433 556899999999988853 89999853
No 66
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=80.16 E-value=1.8 Score=41.97 Aligned_cols=101 Identities=19% Similarity=0.183 Sum_probs=57.8
Q ss_pred chhhHHHHHHHHhhhCCCCCeEEE-EEcccccccchHHHHHH-HHHHC--------CC-CeEEEEEcCCccccccccccc
Q 016175 174 AQIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALN-IAALW--------DL-PAILVCENNHYGMGTAEWRAA 242 (394)
Q Consensus 174 ~~lp~A~G~A~A~k~~~~~~~vv~-l~GDGa~~eG~~~Ealn-~Aa~~--------~L-pvI~vv~NN~~~i~~~~~~~~ 242 (394)
+.+++|+|+|++- -++++. .++++.. ..++.+. .++.+ ++ |+|+++...+.+.+ +...
T Consensus 78 ~~v~~a~G~A~~G-----~rp~~~~tf~~F~~---~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g~~~G-~th~-- 146 (342)
T 2bfd_B 78 GIVGFGIGIAVTG-----ATAIAEIQFADYIF---PAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHG-ALYH-- 146 (342)
T ss_dssp HHHHHHHHHHHTT-----CCEEEECSSGGGCG---GGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESCCSSC-GGGS--
T ss_pred HHHHHHHHHHHCC-----CeeEEEecchhHHH---HHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCCCCCC-cchh--
Confidence 3456777877752 234443 4899853 3556554 34443 44 99988776443222 1111
Q ss_pred cCcchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEEE
Q 016175 243 KSPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEMD 289 (394)
Q Consensus 243 ~~~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~~ 289 (394)
+..+..-+. .+|++.| .=.|+.+.+..++.|++. ++|++|-..
T Consensus 147 ~~~d~~~l~-~iP~l~V~~Psd~~e~~~~l~~a~~~---~~Pv~i~~p 190 (342)
T 2bfd_B 147 SQSPEAFFA-HCPGIKVVIPRSPFQAKGLLLSCIED---KNPCIFFEP 190 (342)
T ss_dssp SCCCHHHHH-TSTTCEEECCSSHHHHHHHHHHHHHS---SSCEEEEEE
T ss_pred hHhHHHHHh-cCCCcEEEeeCCHHHHHHHHHHHHhc---CCcEEEEec
Confidence 112222221 1555433 556899999999988864 889998543
No 67
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=79.45 E-value=4.7 Score=41.75 Aligned_cols=103 Identities=20% Similarity=0.178 Sum_probs=62.6
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhh-cCc-
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDY- 253 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~-g~~- 253 (394)
-.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-++|+|+|+-+-... ++.. ..+ +.+.... ..+
T Consensus 64 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~g~~-~~Q--~~d~~~~~~~~~ 134 (590)
T 1ybh_A 64 FAAEGYARSS---GKPGICIATSGPGATN---LVSGLADALLDSVPLVAITGQVPRRMIGTD-AFQ--ETPIVEVTRSIT 134 (590)
T ss_dssp HHHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTT-CTT--CCCHHHHHGGGS
T ss_pred HHHHHHHHHH---CCCEEEEeccCchHHH---HHHHHHHHHhhCCCEEEEeCcCCccccCCC-ccc--ccCHHHHHHHHh
Confidence 3566666553 3445677777888777 4456777889999998888654322 1111 011 1122221 112
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEe
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (394)
-...+| .+++++.+++++|+..++. .||+.|++-.
T Consensus 135 k~~~~v--~~~~~i~~~l~~A~~~a~~~~~GPV~l~iP~ 171 (590)
T 1ybh_A 135 KHNYLV--MDVEDIPRIIEEAFFLATSGRPGPVLVDVPK 171 (590)
T ss_dssp SEEEEC--CCGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred CeEEec--CCHHHHHHHHHHHHHHHhhCCCceEEEEeCc
Confidence 112344 4677888899999988876 5899998864
No 68
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=78.64 E-value=7 Score=40.03 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=59.8
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhh-cCc-c
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDY-V 254 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~-g~~-~ 254 (394)
.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-... ++... .+ +.+.... ..+ -
T Consensus 56 ~A~GyAr~t---g~~~v~~~TsGpG~~N---~~~gi~~A~~~~vPvl~itg~~~~~~~~~~~-~Q--~~d~~~~~~~~tk 126 (549)
T 3eya_A 56 AAGAEAQLS---GELAVCAGSCGPGNLH---LINGLFDCHRNHVPVLAIAAHIPSSEIGSGY-FQ--ETHPQELFRECSH 126 (549)
T ss_dssp HHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEESCGGGTTSCC-TT--CCCHHHHTSTTCS
T ss_pred HHHHHHHHh---CCCEEEEeCCCCcHhh---hHHHHHHHHhhCCCEEEEeCCCchhhcCCCC-CC--ccCHHHHHhhhhh
Confidence 555666543 3445677777888887 3456778889999998888653211 11110 01 1122221 122 1
Q ss_pred cEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEE
Q 016175 255 PGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMD 289 (394)
Q Consensus 255 ~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ 289 (394)
....| .+++.+.+.+.+|+..+.. .||+.|++-
T Consensus 127 ~~~~v--~~~~~~~~~i~~A~~~A~~~~GPV~l~iP 160 (549)
T 3eya_A 127 YCELV--SSPEQIPQVLAIAMRKAVLNRGVSVVVLP 160 (549)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred eEEEe--CCHHHHHHHHHHHHHHHhhCCCCEEEEeC
Confidence 12344 3566677777777777766 899999985
No 69
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=78.10 E-value=8.5 Score=40.99 Aligned_cols=111 Identities=19% Similarity=0.120 Sum_probs=63.2
Q ss_pred CcCCccch-hhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCccccccccccccCcc
Q 016175 168 GHGIVGAQ-IPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPS 246 (394)
Q Consensus 168 ~~g~lG~~-lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~~~~~~~~~~~~ 246 (394)
..|+-.++ +++|+|+|+.- .-++++..+.--+. -..-++.+++..++||+|++...+++.+.......+..+
T Consensus 431 d~GIaE~~mv~~A~GlA~~g----G~~P~~~tf~~Fs~---f~~~air~~al~~lpVv~v~~~~gigvG~dG~THq~ied 503 (690)
T 3m49_A 431 WYGVREFAMGAAMNGIALHG----GLKTYGGTFFVFSD---YLRPAIRLAALMQLPVTYVFTHDSIAVGEDGPTHEPIEQ 503 (690)
T ss_dssp ECCSCHHHHHHHHHHHHHHS----SCEEEEEEEGGGGG---GGHHHHHHHHHHTCCCEEEEECCSGGGCTTCGGGCCSSH
T ss_pred EcCchHHHHHHHHHHHHHcC----CCEEEEEecHHHHH---HHHHHHHHHHhcCCCcEEEEECCCcCCCCCCCccCCHHH
Confidence 34555443 45778888751 12344443432221 122346778999999999999887754321111111122
Q ss_pred hhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEEE
Q 016175 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILEM 288 (394)
Q Consensus 247 ~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe~ 288 (394)
++-+. .+|++.| -=-|..++..+++.|++. .++|++|-.
T Consensus 504 ~a~lr-~iPnl~V~~Pad~~E~~~~l~~Ai~~--~~~Pv~ir~ 543 (690)
T 3m49_A 504 LAALR-AMPNVSVIRPADGNESVAAWRLALES--TNKPTALVL 543 (690)
T ss_dssp HHHHH-TSTTCEEECCSSHHHHHHHHHHHHHC--SSSCEEEEC
T ss_pred HHHHh-cCCCCEEEeeCCHHHHHHHHHHHHHc--CCCCEEEEe
Confidence 22221 2666655 345788888888888863 268999843
No 70
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=77.82 E-value=6.8 Score=40.21 Aligned_cols=105 Identities=19% Similarity=0.129 Sum_probs=61.8
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhh-hcCc-
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK-RGDY- 253 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~-~g~~- 253 (394)
-.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-++|+|+|+-+-... ++... .+.. .+... ++.+
T Consensus 55 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~-~Q~~-~d~~~~~~~~t 126 (563)
T 2uz1_A 55 HAAEGYARAG---AKLGVALVTAGGGFTN---AVTPIANAWLDRTPVLFLTGSGALRDDETNT-LQAG-IDQVAMAAPIT 126 (563)
T ss_dssp HHHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTSCC-TTCC-CCHHHHHGGGC
T ss_pred HHHHHHHHHh---CCCEEEEEccCccHHH---HHHHHHHHHhcCCCEEEEeCCCCcccCCchh-hhhh-ccHHHHhhhhh
Confidence 3566666553 3445666666778777 3445666888999998888764432 22111 1110 12222 1222
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEee
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t~ 291 (394)
-...+| .+++++.+.+.+|+..+.. .||+.|++-.-
T Consensus 127 k~~~~v--~~~~~~~~~l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 127 KWAHRV--MATEHIPRLVMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp SEEEEC--CCGGGHHHHHHHHHHHHHSSSCCCEEEEEEHH
T ss_pred ceEEEc--CCHHHHHHHHHHHHHHhcCCCCceEEEEeCHH
Confidence 112444 4677788888888887776 49999988643
No 71
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=77.51 E-value=5.4 Score=40.60 Aligned_cols=105 Identities=18% Similarity=0.085 Sum_probs=59.7
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhh-cCc-
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDY- 253 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~-g~~- 253 (394)
-.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-... ++.. ..+.. .+.... ..+
T Consensus 52 ~~A~Gyar~t---g~~~v~~~tsGpG~~N---~~~~l~~A~~~~~Pll~itg~~~~~~~~~~-~~q~~-~d~~~~~~~~~ 123 (528)
T 1q6z_A 52 GIADGYAQAS---RKPAFINLHSAAGTGN---AMGALSNAWNSHSPLIVTAGQQTRAMIGVE-ALLTN-VDAANLPRPLV 123 (528)
T ss_dssp HHHHHHHHHH---TSCEEEEEEHHHHHHH---THHHHHHHHHTTCCEEEEEEECCHHHHTTT-CTTCC-TTGGGSSTTSC
T ss_pred HHHHHHHHHh---CCCEEEEEcCChHHHH---HHHHHHHHhhcCCCEEEEeCCCcccccCCC-ccccc-ccHHHHHHHhh
Confidence 3566766553 3445666677888876 3456677889999998887653321 1111 00110 112111 111
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEee
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDTY 291 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t~ 291 (394)
-...++ .+++.+.+.+.+|+..+.. .||+.|++-.-
T Consensus 124 k~~~~v--~~~~~~~~~i~~A~~~a~~~~~GPV~l~iP~d 161 (528)
T 1q6z_A 124 KWSYEP--ASAAEVPHAMSRAIHMASMAPQGPVYLSVPYD 161 (528)
T ss_dssp SCEECC--SSGGGHHHHHHHHHHHHHSSSCCCEEEEEEGG
T ss_pred HhhhcC--CCHHHHHHHHHHHHHHHhcCCCCcEEEEechh
Confidence 112334 3455677777888877765 58999998743
No 72
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=76.66 E-value=6 Score=40.75 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=60.1
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhh-cCc-
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDY- 253 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~-g~~- 253 (394)
-.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|+-+-... ++... .+. .+.... +.+
T Consensus 62 ~~A~Gyar~t---g~p~v~~~TsGpG~~N---~~~~l~~A~~~~vPll~itg~~~~~~~~~~~-~Q~--~d~~~~~~~~t 132 (566)
T 1ozh_A 62 FMAAAVGRIT---GKAGVALVTSGPGCSN---LITGMATANSEGDPVVALGGAVKRADKAKQV-HQS--MDTVAMFSPVT 132 (566)
T ss_dssp HHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTC-------C--CCHHHHHGGGC
T ss_pred HHHHHHHHHH---CCCEEEEEccChHHHH---HHHHHHHHHhcCCCEEEEeCCCccccCCCCc-ccc--cCHHHHHHHHh
Confidence 3566666553 3445666666888877 3456777888899998888654322 22110 111 122221 222
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEe
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (394)
-...+| .+++.+.+.+++|+..+.. .||+.|++-.
T Consensus 133 k~~~~v--~~~~~~~~~i~~A~~~A~~~r~GPV~l~iP~ 169 (566)
T 1ozh_A 133 KYAIEV--TAPDALAEVVSNAFRAAEQGRPGSAFVSLPQ 169 (566)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred heEEEc--CCHHHHHHHHHHHHHHHhcCCCCeEEEEeCh
Confidence 113444 4566777888888887766 4899998864
No 73
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=76.26 E-value=6.4 Score=37.58 Aligned_cols=97 Identities=19% Similarity=0.122 Sum_probs=56.4
Q ss_pred hhhHHHHHHHHhhhCCCCCeEEE-EEcccccccchHHHHHHH-HHH--------CCCCeEEEEEcCCcc-cccccccccc
Q 016175 175 QIPLGCGLAFAQKYSKDETVTFA-LYGDGAANQGQLFEALNI-AAL--------WDLPAILVCENNHYG-MGTAEWRAAK 243 (394)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~-l~GDGa~~eG~~~Ealn~-Aa~--------~~LpvI~vv~NN~~~-i~~~~~~~~~ 243 (394)
.+++|+|+|++- -++++. .++++. + ..++.+.. ++. .++|+|+++.. +++ -+.++..+
T Consensus 63 ~v~~a~G~A~~G-----~~p~~~~t~~~F~-~--~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~-g~~~~~g~~hs~-- 131 (324)
T 1umd_B 63 IVGAALGMAAHG-----LRPVAEIQFADYI-F--PGFDQLVSQVAKLRYRSGGQFTAPLVVRMPS-GGGVRGGHHHSQ-- 131 (324)
T ss_dssp HHHHHHHHHHHT-----CEEEEECSSGGGC-G--GGHHHHHHTTTTHHHHTTTSSCCCCEEEEEE-CSSSSCGGGSSC--
T ss_pred HHHHHHHHHHCC-----CEEEEEeccHhHH-H--HHHHHHHHHHHHHHhhcCCCCcCCEEEEEcC-CCCCCCCCccch--
Confidence 456788887762 234443 388886 2 35666643 333 79999888873 432 22121111
Q ss_pred CcchhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhhCCCEEEE
Q 016175 244 SPSYYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALKNGPMILE 287 (394)
Q Consensus 244 ~~~~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~~gP~lIe 287 (394)
. +..-+. .+|++.| .=.|+.+.+..++.|+++ ++|++|-
T Consensus 132 ~-~~a~~~-~iP~~~V~~P~d~~e~~~~l~~a~~~---~~Pv~i~ 171 (324)
T 1umd_B 132 S-PEAHFV-HTAGLKVVAVSTPYDAKGLLKAAIRD---EDPVVFL 171 (324)
T ss_dssp C-CHHHHH-TSTTCEEEECCSHHHHHHHHHHHHHC---SSCEEEE
T ss_pred h-HHHHHh-cCCCCEEEEeCCHHHHHHHHHHHHhc---CCCEEEE
Confidence 1 221111 1454433 556889999999998853 8999884
No 74
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=76.22 E-value=9.8 Score=39.07 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=60.7
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccc--cccc--cC-cchhh-
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE--WRAA--KS-PSYYK- 249 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~--~~~~--~~-~~~~~- 249 (394)
-.|.|.|.+. + -.+++|..|=|++| ..-++.-|..-+.|+|+|+-+-... .+... .... .. .+...
T Consensus 55 ~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~ 127 (568)
T 2wvg_A 55 FSAEGYARAK---G-AAAAVVTYSVGALS---AFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEM 127 (568)
T ss_dssp HHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHH
T ss_pred HHHHHHHHhh---C-CeEEEEeCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCChhHhccCcceeeeccccchHHHHHH
Confidence 3566666553 4 45667777888776 4556777889999999888764332 21110 0000 00 12222
Q ss_pred hcCc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEe
Q 016175 250 RGDY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (394)
Q Consensus 250 ~g~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (394)
++.+ -...+|. +++.+.+.+.+|+..+.. .||+.|++-.
T Consensus 128 ~~~~tk~~~~v~--~~~~~~~~l~~A~~~A~~~~GPV~l~iP~ 168 (568)
T 2wvg_A 128 AKNITAAAEAIY--TPEEAPAKIDHVIKTALREKKPVYLEIAC 168 (568)
T ss_dssp HTTSCSCEEEEC--SGGGHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred HHhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 1222 2235553 455666667777766666 8999999874
No 75
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=76.13 E-value=7.9 Score=40.19 Aligned_cols=101 Identities=16% Similarity=0.127 Sum_probs=56.0
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCC-ccccccccccccCcchhh-hcCc-c
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNH-YGMGTAEWRAAKSPSYYK-RGDY-V 254 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~-~~i~~~~~~~~~~~~~~~-~g~~-~ 254 (394)
.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-. ..++.... +. .+... +..+ .
T Consensus 65 aA~GyAr~t---g~~gv~~~TsGpG~~N---~~~gia~A~~~~vPvl~itG~~~~~~~~~~~~-Q~--~d~~~~~~~~tk 135 (603)
T 4feg_A 65 AAAADAKLT---GKIGVCFGSAGPGGTH---LMNGLYDAREDHVPVLALIGQFGTTGMNMDTF-QE--MNENPIYADVAD 135 (603)
T ss_dssp HHHHHHHHH---SSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTTTTSCCT-TC--CCCGGGGTTTCS
T ss_pred HHHHHHHHh---CCceEEEecCCchHHH---HHHHHHHHHHcCCCEEEEecCCcccccCCCcc-cc--ccHHHHhhhhce
Confidence 555666543 3445677777888887 34567778899999988875422 21221110 10 01111 1111 1
Q ss_pred cEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEE
Q 016175 255 PGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMD 289 (394)
Q Consensus 255 ~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~ 289 (394)
...+|. +++.+.+.+.+|+..+.. .||+.|++-
T Consensus 136 ~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP 169 (603)
T 4feg_A 136 YNVTAV--NAATLPHVIDEAIRRAYAHQGVAVVQIP 169 (603)
T ss_dssp EEEECC--CSTTHHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred EEEEcC--CHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 123442 344455556666665555 899999985
No 76
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=75.79 E-value=5.2 Score=41.20 Aligned_cols=104 Identities=16% Similarity=0.114 Sum_probs=56.3
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccc----cccccCcchhh-hc
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE----WRAAKSPSYYK-RG 251 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~----~~~~~~~~~~~-~g 251 (394)
.|.|.|.+. +.-.+++|..|=|++| ..=++.-|..-+.|+|+|+-+-... ++... ..+.. ++... +.
T Consensus 74 ~A~GyAr~t---gkp~v~~~TsGpG~~N---~~~gv~~A~~~~vPll~itg~~~~~~~~~~~~~~~~~q~~-d~q~~~~~ 146 (565)
T 2nxw_A 74 AADAAARYS---STLGVAAVTYGAGAFN---MVNAVAGAYAEKSPVVVISGAPGTTEGNAGLLLHHQGRTL-DTQFQVFK 146 (565)
T ss_dssp HHHHHHHHH---TSCEEEEECTTHHHHT---THHHHHHHHHTTCCEEEEEEECCTTCC--CCCC--------CHHHHHHT
T ss_pred HHHHHHHHh---CCCeEEEECCCCCHHH---HHHHHHHHHhhCCCEEEEeCCCChhhhccCcceeeeccch-hhHHHHHH
Confidence 566766553 3345666666888776 4456777888999998888763221 21110 01100 00111 12
Q ss_pred Cc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEe
Q 016175 252 DY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (394)
Q Consensus 252 ~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (394)
.+ -...+|. +++++.+.+.+|+..+.. .||+.|++-.
T Consensus 147 ~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 185 (565)
T 2nxw_A 147 EITVAQARLD--DPAKAPAEIARVLGAARAQSRPVYLEIPR 185 (565)
T ss_dssp TSCSCEEECC--CTTTHHHHHHHHHHHHHHHTCCEEEEEEG
T ss_pred hhheEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEECCh
Confidence 22 2234442 344455556666665555 8999999873
No 77
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=74.63 E-value=8.1 Score=40.93 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=61.8
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhh-cCc-
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDY- 253 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~-g~~- 253 (394)
-.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-++|+|+|+-+-... ++... -+. .+.... ..+
T Consensus 134 ~aAdGyAr~t---Gkpgvv~~TsGpG~~N---~~~gia~A~~d~vPllvItG~~~~~~~g~~a-~Q~--~Dq~~i~~~~t 204 (677)
T 1t9b_A 134 HMAEGYARAS---GKPGVVLVTSGPGATN---VVTPMADAFADGIPMVVFTGQVPTSAIGTDA-FQE--ADVVGISRSCT 204 (677)
T ss_dssp HHHHHHHHHH---SSCEEEEECSTHHHHT---THHHHHHHHHHTCCEEEEEEECCTTTTTSCC-TTC--CCHHHHTGGGS
T ss_pred HHHHHHHHHH---CCCEEEEECCChHHHH---HHHHHHHHHHcCCCEEEEeCCCChhhcCCCC-ccc--cCHHHHhhhhe
Confidence 3566766553 4455777777888877 3445777888899998888653321 21110 011 111111 112
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEE
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMD 289 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~ 289 (394)
-....| .++..+.+.+.+|+..+.. .||++|++-
T Consensus 205 k~~~~v--~~~~~i~~~i~~A~~~A~~grpGPV~l~lP 240 (677)
T 1t9b_A 205 KWNVMV--KSVEELPLRINEAFEIATSGRPGPVLVDLP 240 (677)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEE
T ss_pred eEEEEc--CCHHHHHHHHHHHHHHHhhCCCceEEEEcC
Confidence 112344 3677888888999887775 589999987
No 78
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=74.25 E-value=9 Score=39.31 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=57.4
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccc--cccc--cC-cchhhh
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE--WRAA--KS-PSYYKR 250 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~--~~~~--~~-~~~~~~ 250 (394)
-.|.|.|.+. + -.+++|..|=|++| ..-++.-|..-++|+|+|+-+-... ++... .... .. .+....
T Consensus 55 ~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~ 127 (566)
T 2vbi_A 55 FSAEGYARSN---G-AAAAVVTFSVGAIS---AMNALGGAYAENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEM 127 (566)
T ss_dssp HHHHHHHHHH---S-CEEEEECTTTTHHH---HHHHHHHHHHTTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHHH
T ss_pred HHHHHHHhhc---C-CeEEEEeCCCCHHH---HHHHHHHHHhhCCCEEEEECCCChHHhccCceeeeeccCcchHHHHHH
Confidence 3566666553 4 45566666777776 4556777889999999888764322 21110 0000 00 112221
Q ss_pred -cCc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEe
Q 016175 251 -GDY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (394)
Q Consensus 251 -g~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (394)
+.+ -...+|. +++.+.+.+++|+..+.. .||+.|++-.
T Consensus 128 ~~~~tk~~~~v~--~~~~~~~~l~~A~~~a~~~~GPV~l~iP~ 168 (566)
T 2vbi_A 128 ARQVTCAAESIT--DAHSAPAKIDHVIRTALRERKPAYLDIAC 168 (566)
T ss_dssp HHTTCSEEEEEC--SSSSHHHHHHHHHHHHHHHTCCEEEEEET
T ss_pred HhhhEeEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 222 2234553 333455556666666655 7999999864
No 79
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=74.25 E-value=6.3 Score=40.51 Aligned_cols=103 Identities=11% Similarity=0.067 Sum_probs=59.8
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccc-cccccccCcchhhh-cCc-
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGT-AEWRAAKSPSYYKR-GDY- 253 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~-~~~~~~~~~~~~~~-g~~- 253 (394)
.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-... ++. ....+. .+.... ..+
T Consensus 62 ~A~GyAr~t---g~pgv~~~TsGpG~~N---~~~~i~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~--~dq~~~~~~~t 133 (568)
T 2c31_A 62 AASIAGYIE---GKPGVCLTVSAPGFLN---GVTSLAHATTNCFPMILLSGSSEREIVDLQQGDYEE--MDQMNVARPHC 133 (568)
T ss_dssp HHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTC--CCHHHHSGGGS
T ss_pred HHHHHHHHh---CCCEEEEEcCCccHHH---HHHHHHHHHhcCCCEEEEccCCCccccCCCCCcccc--cCHHHHHHhhh
Confidence 456666543 3445677777777776 5566778889999998888654322 110 000011 121111 112
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEe
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (394)
-...+| .+++.+.+.+.+|+..+.. .||+.|++-.
T Consensus 134 k~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 170 (568)
T 2c31_A 134 KASFRI--NSIKDIPIGIARAVRTAVSGRPGGVYVDLPA 170 (568)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEET
T ss_pred heeeec--CCHHHHHHHHHHHHHHhcCCCCceEEEeCCH
Confidence 112344 3566677778888877765 6899998863
No 80
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=74.19 E-value=15 Score=37.82 Aligned_cols=104 Identities=24% Similarity=0.221 Sum_probs=58.3
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhh-hcCc-c
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK-RGDY-V 254 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~-~g~~-~ 254 (394)
.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-... +++.. -+. .|... +..+ -
T Consensus 64 aAdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~p~~~~g~~~-~Qe--~d~~~~~~~~tk 134 (578)
T 3lq1_A 64 FALGLAKAS---KRPVVLLCTSGTAAAN---YFPAVAEANLSQIPLIVLTADRPHELRNVGA-PQA--MDQLHLYGSHVK 134 (578)
T ss_dssp HHHHHHHHH---CCCEEEEECSSHHHHT---THHHHHHHHHTTCCEEEEEEECCGGGTTSSC-TTC--CCCTTTTGGGSS
T ss_pred HHHHHHHhh---CCCEEEEECCchhhhh---hhHHHHHHHhcCCCeEEEeCCCCHHhhcCCC-CCC--cCHhhHHhhhee
Confidence 566776554 4456777777888887 3446777889999998888543211 11110 010 01111 1111 1
Q ss_pred cEEEE-eCCCHHH----HHHHHHHHHHHHhh--CCCEEEEEEe
Q 016175 255 PGLKV-DGMDALA----VKQACKFAKEHALK--NGPMILEMDT 290 (394)
Q Consensus 255 ~~~~V-DG~D~~a----v~~a~~~A~~~ar~--~gP~lIe~~t 290 (394)
....| +..++.+ +..++++|+..+.. .||+.|++-.
T Consensus 135 ~~~~v~~~~~~~~~~~~i~~~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 135 DFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp EEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCCEEEEEEC
T ss_pred eEeecCCCCCchHHHHHHHHHHHHHHHHhhCCCCCcEEEECcc
Confidence 12344 3445432 34567777776665 6999999874
No 81
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=73.82 E-value=6.2 Score=40.50 Aligned_cols=103 Identities=14% Similarity=0.161 Sum_probs=59.6
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccc-cccccccCcchhh-hcCc-
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGT-AEWRAAKSPSYYK-RGDY- 253 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~-~~~~~~~~~~~~~-~g~~- 253 (394)
.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-... ++. ...-+. .+... +..+
T Consensus 60 ~A~Gyar~t---g~pgv~~~TsGpG~~N---~~~gi~~A~~~~vPll~itg~~~~~~~~~~~~~~Q~--~dq~~~~~~~t 131 (564)
T 2q28_A 60 AAAASGFLT---QKPGICLTVSAPGFLN---GLTALANATVNGFPMIMISGSSDRAIVDLQQGDYEE--LDQMNAAKPYA 131 (564)
T ss_dssp HHHHHHHHH---SSCEEEEECSHHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTSCCTTC--CCHHHHHGGGS
T ss_pred HHHHHHHHh---CCCEEEEEccCchHHH---HHHHHHHHHhcCCCEEEEeCCCCccccCCCCCcccc--ccHHHHHHHhh
Confidence 566666553 3445667777777776 4556777889999999888654322 110 000011 11111 1112
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEe
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (394)
-...+| .++..+.+.+.+|+..+.. .||+.|++-.
T Consensus 132 k~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~ 168 (564)
T 2q28_A 132 KAAFRV--NQPQDLGIALARAIRVSVSGRPGGVYLDLPA 168 (564)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHSSSCCEEEEEEEH
T ss_pred heeeec--CCHHHHHHHHHHHHHHHhcCCCceEEEEcCH
Confidence 112444 3566677778888877765 5899998863
No 82
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=71.42 E-value=7.8 Score=40.21 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=58.4
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhh-hcCc-c
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK-RGDY-V 254 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~-~g~~-~ 254 (394)
.|.|.|.+. +.-.+++|..|=|++| ..=++.-|..-+.|+|+|.-+-... ++... .+. .+... +..+ -
T Consensus 84 aA~GyAr~t---gkpgv~~~TsGpG~~N---~~~gia~A~~~~vPlv~ItG~~~~~~~g~~~-~Q~--~d~~~~~~~~tk 154 (604)
T 2x7j_A 84 FALGLAKAK---QRPVLLICTSGTAAAN---FYPAVVEAHYSRVPIIVLTADRPHELREVGA-PQA--INQHFLFGNFVK 154 (604)
T ss_dssp HHHHHHHHH---TSCEEEEECSSHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGSSSCC-TTC--CCCTTTTGGGSS
T ss_pred HHHHHHHhh---CCCEEEEECChhHHHH---HHHHHHHHhhcCCCEEEEeCCCCHHHhCCCC-CCc--CcHHHHhhhhee
Confidence 566666553 4455777777888877 3456777888899999888654322 21110 011 11111 1111 1
Q ss_pred cEEEEe-CCCH----HHHHHHHHHHHHHHhh--CCCEEEEEEee
Q 016175 255 PGLKVD-GMDA----LAVKQACKFAKEHALK--NGPMILEMDTY 291 (394)
Q Consensus 255 ~~~~VD-G~D~----~av~~a~~~A~~~ar~--~gP~lIe~~t~ 291 (394)
....|. ..+. ..+.+.+++|+..+.. .||+.|++-.-
T Consensus 155 ~~~~v~~~~~~~~~~~~~~~~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 155 FFTDSALPEESPQMLRYIRTLASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp CEEECCCCCCSHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECC
T ss_pred eeeecCCCcccchhHHHHHHHHHHHHHHhhCCCCCcEEEEcccC
Confidence 124442 2331 1266677777776665 68999998743
No 83
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=69.37 E-value=8 Score=40.04 Aligned_cols=101 Identities=15% Similarity=0.053 Sum_probs=58.7
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhh-hcCc-
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK-RGDY- 253 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~-~g~~- 253 (394)
-.|.|.|.+ .+.-.+++|..|=|++| ..=++.-|..-+.|+|+|+-+.... ++.. ..+. .+... ++.+
T Consensus 57 ~~A~GyAr~---tgk~~v~~~tsGpG~~N---~~~gl~~A~~~~vPll~Itg~~p~~~~g~~-~~Q~--~d~~~~~~~~t 127 (590)
T 1v5e_A 57 MAAVMQSKF---GGNLGVTVGSGGPGASH---LINGLYDAAMDNIPVVAILGSRPQRELNMD-AFQE--LNQNPMYDHIA 127 (590)
T ss_dssp HHHHHHHHT---TCCCCEEEECTTHHHHT---THHHHHHHHHHTCCEEEEEEECCGGGTTTT-CTTC--CCCHHHHHTTC
T ss_pred HHHHHHHHH---HCCCEEEEeCcChHHHH---HHHHHHHHHhcCCCEEEEcCCCCcccCCCC-cccc--cCHHHHHHhhc
Confidence 345555544 34455677777888777 3445666778899998888765432 2211 0111 11111 1222
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh-C-CCEEEEEE
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK-N-GPMILEMD 289 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~-~-gP~lIe~~ 289 (394)
-..+.+ .++.++.+.+++|+..+.. + ||+.| +-
T Consensus 128 k~~~~v--~~~~~~~~~i~~A~~~A~~~~~GPV~l-iP 162 (590)
T 1v5e_A 128 VYNRRV--AYAEQLPKLVDEAARMAIAKRGVAVLE-VP 162 (590)
T ss_dssp SEEEEC--CSGGGHHHHHHHHHHHHHHTTSEEEEE-EE
T ss_pred cEEEEe--CCHHHHHHHHHHHHHHHhcCCCceEEE-Ec
Confidence 113444 4677788888888887776 4 89999 64
No 84
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=67.16 E-value=17 Score=37.76 Aligned_cols=103 Identities=14% Similarity=0.118 Sum_probs=59.6
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhhh-cCc-c
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYKR-GDY-V 254 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~~-g~~-~ 254 (394)
.|.|.|.+.. ++-.++++..|=|++| ..-++.-|..-+.|+|+|+-+-... ++.. .-+ ..|.... ..+ -
T Consensus 80 ~A~GyAr~tg--g~~~v~~~TsGpG~~N---~~~~l~~A~~~~vPlvvItg~~p~~~~~~~-~~Q--~~d~~~~~~~~tk 151 (616)
T 2pan_A 80 MAEGYTRATA--GNIGVCLGTSGPAGTD---MITALYSASADSIPILCITGQAPRARLHKE-DFQ--AVDIEAIAKPVSK 151 (616)
T ss_dssp HHHHHHHHST--TCCEEEEECSTHHHHT---SHHHHHHHHHTTCCEEEEEEECCGGGTTTT-CTT--CCCHHHHHGGGSS
T ss_pred HHHHHHHhcC--CCceEEEeCCCchHHH---HHHHHHHHHhcCCCEEEEecCCcccccCcc-ccc--ccCHHHHHHHHHH
Confidence 5566665420 2334566677888776 3456777888899998888654322 2111 011 1122221 112 1
Q ss_pred cEEEEeCCCHHHHHHHHHHHHHHHhh--CCCEEEEEEe
Q 016175 255 PGLKVDGMDALAVKQACKFAKEHALK--NGPMILEMDT 290 (394)
Q Consensus 255 ~~~~VDG~D~~av~~a~~~A~~~ar~--~gP~lIe~~t 290 (394)
....+ .++..+.+.+++|+..+.. .||+.|++-.
T Consensus 152 ~~~~v--~~~~~i~~~l~~A~~~A~~~r~GPV~l~iP~ 187 (616)
T 2pan_A 152 MAVTV--REAALVPRVLQQAFHLMRSGRPGPVLVDLPF 187 (616)
T ss_dssp EEEEC--CSGGGHHHHHHHHHHHHHSSSCCCEEEEEEH
T ss_pred hhccc--CCHHHHHHHHHHHHHHHhcCCCceEEEEcch
Confidence 12344 3566788888888887765 5899999863
No 85
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=63.11 E-value=36 Score=38.67 Aligned_cols=109 Identities=13% Similarity=0.072 Sum_probs=64.3
Q ss_pred hhhHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc---ccccccccccCcchhhhc
Q 016175 175 QIPLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG---MGTAEWRAAKSPSYYKRG 251 (394)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~---i~~~~~~~~~~~~~~~~g 251 (394)
.+.+++|++++ +.++++.+--.+++ ...|.|..++-..+|+|+++-+.... ++...+ +. ..++.+.
T Consensus 66 A~~aaiGAa~a------GaR~~t~Ts~~Gl~--lm~e~l~~~ag~~~P~Vi~va~R~g~~~glsi~~~-hs--d~~~ar~ 134 (1231)
T 2c42_A 66 AAGAVHGALAA------GALTTTFTASQGLL--LMIPNMYKISGELLPGVFHVTARAIAAHALSIFGD-HQ--DIYAARQ 134 (1231)
T ss_dssp HHHHHHHHHHT------TCCEEEEECHHHHH--HHHHHHHHHHHTTCCCEEEEEECCCCSSSBCCSCC-SH--HHHTTTT
T ss_pred HHHHHHHHHHc------CChHhhhccHHHHH--HHHHHHHHHhCCCCCEEEEECCCCccCCCCcCCCc-hh--hHHHHhc
Confidence 34567777765 34555554433344 35688866656789987777765432 211111 10 1112232
Q ss_pred CcccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEeeecCCCC
Q 016175 252 DYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHS 297 (394)
Q Consensus 252 ~~~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t~R~~GHs 297 (394)
..++ .+.-.++.+.+.-+..|...+.+ .-|+++-..++|. +|.
T Consensus 135 ~G~~--vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~-sh~ 178 (1231)
T 2c42_A 135 TGFA--MLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRT-SHE 178 (1231)
T ss_dssp SSCE--EEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTT-TTC
T ss_pred CCcE--EEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCccc-ccc
Confidence 2242 34556788888888888777766 8999998888764 554
No 86
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=60.05 E-value=19 Score=36.80 Aligned_cols=105 Identities=8% Similarity=0.027 Sum_probs=56.5
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCccc-c--cccc--cccc-Ccchhhh
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGM-G--TAEW--RAAK-SPSYYKR 250 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i-~--~~~~--~~~~-~~~~~~~ 250 (394)
-.|.|.|.+. + -.+++|..|=|++| ..=++.-|..-+.|+|+|+-+-.... . .... .... ..+....
T Consensus 56 ~~A~Gyar~t---g-~~v~~~TsGpG~~N---~~~gia~A~~~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~ 128 (563)
T 2vk8_A 56 YAADGYARIK---G-MSCIITTFGVGELS---ALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRM 128 (563)
T ss_dssp HHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHHTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHH
T ss_pred HHHHHHHHhh---C-CcEEEEcCCCcHHH---HHHHHHHHHhhCCCEEEEECCCChHHhhcccccccccCCcchHHHHHH
Confidence 3566776654 3 34677777888876 44567778889999988886533211 0 0000 0000 0011111
Q ss_pred -cCc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEe
Q 016175 251 -GDY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (394)
Q Consensus 251 -g~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (394)
..+ -...+|. +++.+.+.+.+|+..+.. .||+.|++-.
T Consensus 129 ~~~~~k~~~~v~--~~~~~~~~i~~A~~~A~~~~GPV~l~iP~ 169 (563)
T 2vk8_A 129 SANISETTAMIT--DIATAPAEIDRCIRTTYVTQRPVYLGLPA 169 (563)
T ss_dssp HHTTCSEEEECC--CTTTHHHHHHHHHHHHHHHTSCEEEEEET
T ss_pred hhhhEEEEEEeC--CHHHHHHHHHHHHHHHHhCCCCEEEEech
Confidence 122 2224443 444455555555555555 7999999864
No 87
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=55.63 E-value=38 Score=34.55 Aligned_cols=104 Identities=12% Similarity=0.134 Sum_probs=56.0
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccc--cccccCcch---hhh
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAE--WRAAKSPSY---YKR 250 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~--~~~~~~~~~---~~~ 250 (394)
-.|.|.|.+. + -.++++..|=|++| ..=++.-|..-+.|+|+|+-+.... .+... .......++ ...
T Consensus 77 ~~A~GyAr~t---G-~~v~~~tsGpG~~N---~~~gi~~A~~~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (570)
T 2vbf_A 77 YMADGYARTK---K-AAAFLTTFGVGELS---AINGLAGSYAENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMKM 149 (570)
T ss_dssp HHHHHHHHHH---S-CEEEEEETTHHHHH---HHHHHHHHHHTTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHHH
T ss_pred HHHHHHHHHh---C-CeEEEEcCCCCHHH---HHHHHHHHhhhCCCEEEEeCCCCHHHhhccccceeeccccchHHHHHH
Confidence 3566766553 4 45677777877766 4556777889999998888654432 11100 000000011 111
Q ss_pred -cCc-ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCCEEEEEEe
Q 016175 251 -GDY-VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDT 290 (394)
Q Consensus 251 -g~~-~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (394)
..+ -...+|. + ..+...+++|+..+.. .||+.|++-.
T Consensus 150 ~~~~tk~~~~v~--~-~~~~~~l~~A~~~A~~~~GPV~l~iP~ 189 (570)
T 2vbf_A 150 HEPVTAARTLLT--A-ENATYEIDRVLSQLLKERKPVYINLPV 189 (570)
T ss_dssp TGGGCSEEEECC--T-TTHHHHHHHHHHHHHHHCCCEEEEEEH
T ss_pred hhhhEEEEEEEC--c-ccHHHHHHHHHHHHhhCCCCEEEEcch
Confidence 112 2234453 2 3444555555555555 7999999864
No 88
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=51.22 E-value=26 Score=35.60 Aligned_cols=47 Identities=11% Similarity=0.121 Sum_probs=33.5
Q ss_pred hHHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC
Q 016175 177 PLGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (394)
Q Consensus 177 p~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN 230 (394)
-.|.|.|.+. + -.++++..|=|++| ..=++.-|..-+.|+|+|+-+.
T Consensus 57 ~~A~Gyar~t---g-~~v~~~tsGpG~~N---~~~gv~~A~~~~~Pll~itg~~ 103 (552)
T 1ovm_A 57 YAADGYARCK---G-FAALLTTFGVGELS---AMNGIAGSYAEHVPVLHIVGAP 103 (552)
T ss_dssp HHHHHHHHHH---S-CEEEEEETTHHHHH---THHHHHHHHHTTCCEEEEEEEC
T ss_pred HHHHHHHHhh---C-CcEEEEccCCcHHH---HHHHHHHHhhhcCCEEEEECCC
Confidence 4667777664 3 34777777888766 3446777889999998888654
No 89
>2zzd_B Thiocyanate hydrolase subunit beta; scnase, cobalt, metalloprotein, sulfenic acid, sulfinic acid, nitrIle hydratase, carbonyl sulfide; HET: FRU TLA BGC; 1.78A {Thiobacillus thioparus} PDB: 2dd4_B 2dxb_B 2dd5_B* 2dxc_B*
Probab=48.94 E-value=24 Score=30.52 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 016175 321 IERIRKLILAHDLATEKELKDIEKEVRKEVDD 352 (394)
Q Consensus 321 i~~~~~~L~~~g~~t~~~l~~i~~e~~~~v~~ 352 (394)
+.-+.+.|++.|++|++||++..+++++....
T Consensus 113 L~ALe~lLvekGvit~~EL~ar~aEv~ar~~~ 144 (157)
T 2zzd_B 113 LLTAARILVDKQFVTLTELHNKIVEMRERVAS 144 (157)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhhhc
Confidence 67789999999999999999998888887544
No 90
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=47.40 E-value=84 Score=31.93 Aligned_cols=102 Identities=19% Similarity=0.112 Sum_probs=57.3
Q ss_pred HHHHHHHHhhhCCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcCCcc-ccccccccccCcchhh-hcCc-c
Q 016175 178 LGCGLAFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYG-MGTAEWRAAKSPSYYK-RGDY-V 254 (394)
Q Consensus 178 ~A~G~A~A~k~~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~-i~~~~~~~~~~~~~~~-~g~~-~ 254 (394)
.|.|.|.+. +.-.+++|..|=|++| ..-++.-|..-+.|+|+|.-+-... +++.. -+. .|... +..+ -
T Consensus 61 ~AdGyAr~t---G~pgv~~~TsGpG~~N---~~~gia~A~~d~vPll~itG~~~~~~~g~~~-~Q~--~d~~~~~~~~tk 131 (556)
T 3hww_A 61 LALGLAKVS---KQPVAVIVTSGTAVAN---LYPALIEAGLTGEKLILLTADRPPELIDCGA-NQA--IRQPGMFASHPT 131 (556)
T ss_dssp HHHHHHHHH---CSCEEEEECSSHHHHT---THHHHHHHHHHCCCEEEEEEECCGGGSSSSC-TTC--CCCTTTTTTCSS
T ss_pred HHHHHHHhh---CCCEEEEECCCcHHHh---hhHHHHHHHHhCCCeEEEeCCCCHHHhccCC-Ccc--ccHHHHHhhhee
Confidence 455666543 4456777777888887 3446777889999998887643322 22111 010 11111 1111 1
Q ss_pred cEEEEe-CC---CHHHHHHHHHHHHHHHhh-CCCEEEEEEe
Q 016175 255 PGLKVD-GM---DALAVKQACKFAKEHALK-NGPMILEMDT 290 (394)
Q Consensus 255 ~~~~VD-G~---D~~av~~a~~~A~~~ar~-~gP~lIe~~t 290 (394)
....|. .. ....+.+++++|+.. . .||+.|++-.
T Consensus 132 ~~~~v~~~~~~~~~~~i~~~i~~A~~~--~r~GPV~i~iP~ 170 (556)
T 3hww_A 132 HSISLPRPTQDIPARWLVSTIDHALGT--LHAGGVHINCPF 170 (556)
T ss_dssp EEEECCCCCTTSCHHHHHHHHHHHHHS--CCSSCEEEEEEC
T ss_pred EEEecCCCcccccHHHHHHHHHHHHhc--CCCCCEEEeCCc
Confidence 123332 21 245577788888732 3 6899999874
No 91
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=32.01 E-value=58 Score=27.97 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=28.2
Q ss_pred CCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEE
Q 016175 192 ETVTFALYGDGAANQGQLFEALNIAALWDLPAILVC 227 (394)
Q Consensus 192 ~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv 227 (394)
...+|+++.||..+.+...+++..+...++++..|-
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~ig 146 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLG 146 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEE
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEE
Confidence 457999999999888878888888877777764443
No 92
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=31.53 E-value=2.2e+02 Score=23.38 Aligned_cols=90 Identities=21% Similarity=0.142 Sum_probs=52.0
Q ss_pred eEEEEEcccc-cccchHHHHHHHHHHCCCCeEEEEEcCCcccc---cccccc-------------cc-Ccchhhhc--Cc
Q 016175 194 VTFALYGDGA-ANQGQLFEALNIAALWDLPAILVCENNHYGMG---TAEWRA-------------AK-SPSYYKRG--DY 253 (394)
Q Consensus 194 ~vv~l~GDGa-~~eG~~~Ealn~Aa~~~LpvI~vv~NN~~~i~---~~~~~~-------------~~-~~~~~~~g--~~ 253 (394)
.++.|-||.- .-+-..-|.+.-|..+.=.|.+-.+-|..-|- .|.... +. ...|.-.| ..
T Consensus 4 m~i~f~gddlea~ekalkemirqarkfagtvtytl~gn~l~i~itgvpeqvrkelakeaerl~~efni~v~y~imgsgsg 83 (170)
T 4hhu_A 4 MVIVFEGDDLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITGVPEQVRKELAKEAERLKAEFNINVQYQIMGSGSG 83 (170)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEESCCHHHHHHHHHHHHHHHHHHTCEEEEEEECTTCC
T ss_pred EEEEEecCcHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeCCcHHHHHHHHHHHHHHHHhcceEEEEEEEeCCce
Confidence 4566666654 33445666666666666556666666654431 111100 00 00111122 23
Q ss_pred ccEEEEeCCCHHHHHHHHHHHHHHHhh-CCC
Q 016175 254 VPGLKVDGMDALAVKQACKFAKEHALK-NGP 283 (394)
Q Consensus 254 ~~~~~VDG~D~~av~~a~~~A~~~ar~-~gP 283 (394)
+-.++..|.|.+++..|+++.+..+|+ .|.
T Consensus 84 vm~i~f~gddlea~ekalkemirqarkfagt 114 (170)
T 4hhu_A 84 VMVIVFEGDDLEALEKALKEMIRQARKFAGT 114 (170)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEEEEEecCcHHHHHHHHHHHHHHHHhhcce
Confidence 445677999999999999999999998 663
No 93
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=31.28 E-value=99 Score=34.03 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=53.7
Q ss_pred hhhHHHHHHHHhhhCCCCCeEE--EEEcccccccc--hHHHHHH-HH-HHC--CCCeEEEEEcCCccccccccccccCcc
Q 016175 175 QIPLGCGLAFAQKYSKDETVTF--ALYGDGAANQG--QLFEALN-IA-ALW--DLPAILVCENNHYGMGTAEWRAAKSPS 246 (394)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv--~l~GDGa~~eG--~~~Ealn-~A-a~~--~LpvI~vv~NN~~~i~~~~~~~~~~~~ 246 (394)
.++.|.|+|++ +...++| +.+||=. +| ..++-+. -+ +.| ++|+++++.....+.+ +........+
T Consensus 664 ~vg~a~G~A~~----G~~~lpv~e~qf~dF~--~~AQra~DQii~~~~ak~~~~~~vv~~l~~G~~g~G-~~Hss~~~E~ 736 (933)
T 2jgd_A 664 VLAFEYGYATA----EPRTLTIWEAQFGDFA--NGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQG-PEHSSARLER 736 (933)
T ss_dssp HHHHHHHHHHH----CTTSEEEEEC-CGGGG--GGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSCCCHHH
T ss_pred HHHHHHHHHhc----CCCCCCEEEEEEhhhh--cccHHHHHHHHHHHHHHHccCCCEEEEEeCCCCCCC-cccccchHHH
Confidence 34566777665 3443344 3678743 22 3344343 33 344 8899988886322332 2111111112
Q ss_pred hhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhh-CCCEEE
Q 016175 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMIL 286 (394)
Q Consensus 247 ~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~-~gP~lI 286 (394)
|.... .+|++.| .=.|+.+....++.++. +. ++|++|
T Consensus 737 ~l~~~-~~pnm~V~~Pst~~e~~~lLr~a~~--~~~~~Pvii 775 (933)
T 2jgd_A 737 YLQLC-AEQNMQVCVPSTPAQVYHMLRRQAL--RGMRRPLVV 775 (933)
T ss_dssp HHHTC-CTTCCEEECCCSHHHHHHHHHHHHH--SSCCCCEEE
T ss_pred HHHHh-CCCCeEEEecCCHHHHHHHHHHHHH--hcCCCcEEE
Confidence 22211 1455554 55788998888888742 34 789998
No 94
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=30.73 E-value=46 Score=28.39 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=28.0
Q ss_pred CeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC
Q 016175 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (394)
Q Consensus 193 ~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN 230 (394)
.++|+.++ ....|..+| +.+|...+.|||.+..++
T Consensus 79 D~vva~~~--~~d~Gt~~E-iGyA~algKPVi~l~~~~ 113 (165)
T 2khz_A 79 DVVVAEVT--QPSLGVGYE-LGRAVALGKPILCLFRPQ 113 (165)
T ss_dssp SEEEEECS--SCCHHHHHH-HHHHHHTCSSEEEEECTT
T ss_pred CEEEEECC--CCCCCHHHH-HHHHHHCCCEEEEEEcCC
Confidence 45666665 678899999 889999999998887655
No 95
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=27.77 E-value=84 Score=21.29 Aligned_cols=22 Identities=23% Similarity=0.447 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016175 336 EKELKDIEKEVRKEVDDAIAKA 357 (394)
Q Consensus 336 ~~~l~~i~~e~~~~v~~a~~~A 357 (394)
..+++.++.++-++|...+.++
T Consensus 6 ~~dle~~KqEIL~E~RkElqK~ 27 (45)
T 1use_A 6 YSDLQRVKQELLEEVKKELQKV 27 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444443
No 96
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=25.94 E-value=44 Score=29.67 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=29.8
Q ss_pred CeEEEEEcccc-cccchHHHHHHHHH-HCCCCeEEEEEc
Q 016175 193 TVTFALYGDGA-ANQGQLFEALNIAA-LWDLPAILVCEN 229 (394)
Q Consensus 193 ~~vv~l~GDGa-~~eG~~~Ealn~Aa-~~~LpvI~vv~N 229 (394)
..+|+++|+=. ...+..|| +..|. ..++|||.|..+
T Consensus 81 k~vIllIs~~T~~s~~v~wE-Ie~Ai~~~~~PII~Vy~~ 118 (189)
T 3hyn_A 81 KNIILFLSSITANSRALREE-MNYGIGTKGLPVIVIYPD 118 (189)
T ss_dssp EEEEEECCTTCCCCHHHHHH-HHHHTTTTCCCEEEEETT
T ss_pred CcEEEEEecCccccchhHHH-HHHHHHhcCCcEEEEECC
Confidence 46888999888 45578886 99999 999999988766
No 97
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=23.97 E-value=63 Score=27.80 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=28.9
Q ss_pred CeEEEEEcccc-cccchHHHHHHHHHHCCCCeEEEEEcCC
Q 016175 193 TVTFALYGDGA-ANQGQLFEALNIAALWDLPAILVCENNH 231 (394)
Q Consensus 193 ~~vv~l~GDGa-~~eG~~~Ealn~Aa~~~LpvI~vv~NN~ 231 (394)
.++|+++ ||. ...|..|| +.+|...+.||+.+..+-.
T Consensus 71 D~viA~l-dg~~~D~Gt~~E-iG~A~a~gkPVi~~~~D~R 108 (162)
T 3ehd_A 71 DLLVALL-DGPTIDAGVASE-IGVAYAKGIPVVALYTDSR 108 (162)
T ss_dssp SEEEEEC-CSSSCCHHHHHH-HHHHHHTTCCEEEECCCGG
T ss_pred CEEEEEC-CCCCCCCCHHHH-HHHHHHCCCEEEEEEcCcc
Confidence 3555555 665 78899999 8999999999988877644
No 98
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=23.64 E-value=79 Score=27.51 Aligned_cols=33 Identities=3% Similarity=-0.045 Sum_probs=23.5
Q ss_pred eEEEEEcccccccchHHHHHHHHHHCCCCeEEE
Q 016175 194 VTFALYGDGAANQGQLFEALNIAALWDLPAILV 226 (394)
Q Consensus 194 ~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~v 226 (394)
+++++.||+...++...+++..++..+..+.+|
T Consensus 109 iiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~I 141 (192)
T 2x5n_A 109 IVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDII 141 (192)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEEECCCCCCchhHHHHHHHHHHCCCEEEEE
Confidence 455556766556678888888888888886544
No 99
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=23.06 E-value=1.4e+02 Score=24.91 Aligned_cols=40 Identities=13% Similarity=0.044 Sum_probs=32.3
Q ss_pred CCCCCeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEcC
Q 016175 189 SKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENN 230 (394)
Q Consensus 189 ~~~~~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~NN 230 (394)
.+++.++|++..-|... .+.+++..|...+.++|.|..|.
T Consensus 77 ~~~~d~vI~iS~sG~t~--~~~~~~~~ak~~g~~vi~IT~~~ 116 (186)
T 1m3s_A 77 LAEGDLVIIGSGSGETK--SLIHTAAKAKSLHGIVAALTINP 116 (186)
T ss_dssp CCTTCEEEEECSSSCCH--HHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCCCCEEEEEcCCCCcH--HHHHHHHHHHHCCCEEEEEECCC
Confidence 34667889999888875 47889999999999998887653
No 100
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=22.70 E-value=97 Score=22.67 Aligned_cols=27 Identities=30% Similarity=0.293 Sum_probs=23.2
Q ss_pred EEEeCCCHHHHHHHHHHHHHHHhh-CCC
Q 016175 257 LKVDGMDALAVKQACKFAKEHALK-NGP 283 (394)
Q Consensus 257 ~~VDG~D~~av~~a~~~A~~~ar~-~gP 283 (394)
++.-|.|.++...|+++.+..+|+ .|.
T Consensus 5 irfrgddleafekalkemirqarkfagt 32 (85)
T 2kl8_A 5 IRFRGDDLEAFEKALKEMIRQARKFAGT 32 (85)
T ss_dssp EEEECSSHHHHHHHHHHHHHHHTTTTCE
T ss_pred eeecCCcHHHHHHHHHHHHHHHHhhcce
Confidence 566789999999999999999988 663
No 101
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=22.10 E-value=2.2e+02 Score=31.05 Aligned_cols=103 Identities=12% Similarity=0.239 Sum_probs=54.3
Q ss_pred hhhHHHHHHHHhhhCCCCCeEE--EEEcccccccch--HHHHHHHHH--HC--CCCeEEEEEcCCccccccccccccCcc
Q 016175 175 QIPLGCGLAFAQKYSKDETVTF--ALYGDGAANQGQ--LFEALNIAA--LW--DLPAILVCENNHYGMGTAEWRAAKSPS 246 (394)
Q Consensus 175 ~lp~A~G~A~A~k~~~~~~~vv--~l~GDGa~~eG~--~~Ealn~Aa--~~--~LpvI~vv~NN~~~i~~~~~~~~~~~~ 246 (394)
.++.|+|+|++- .+.+++ +.+||=. ++. .++-+...+ .| ++|+++++...+.+.+ +...+....+
T Consensus 596 ~vG~a~G~A~~G----~~~~~i~eaqf~dF~--~~AQ~~~DQ~i~~~~~k~~~~~~vvi~~p~G~~G~G-p~Hs~~~~E~ 668 (868)
T 2yic_A 596 AVGFEYGYSVGN----PDAMVLWEAQFGDFV--NGAQSIIDEFISSGEAKWGQLSDVVLLLPHGHEGQG-PDHTSGRIER 668 (868)
T ss_dssp HHHHHHHHHHHC----TTSEEEEECSSGGGG--GGGHHHHHHTTTTHHHHHCCCCCCEEEEECCCSSSC-TTSSCCCHHH
T ss_pred HHHHHHHHHccC----CCCceEEEEehHHHH--hhHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCCCC-hhhcCCcHHH
Confidence 345677777653 334443 4556543 322 233232222 23 8899988886554433 2221111112
Q ss_pred hhhhcCcccEEEE-eCCCHHHHHHHHHHHHHHHhh-CCCEEEE
Q 016175 247 YYKRGDYVPGLKV-DGMDALAVKQACKFAKEHALK-NGPMILE 287 (394)
Q Consensus 247 ~~~~g~~~~~~~V-DG~D~~av~~a~~~A~~~ar~-~gP~lIe 287 (394)
|.... .+|+++| .=.|+.+.+..++.++.. . ++|++|-
T Consensus 669 ~l~l~-~~pnm~V~~Ps~p~~~~~lLr~a~~~--~~~~Pvii~ 708 (868)
T 2yic_A 669 FLQLW-AEGSMTIAMPSTPANYFHLLRRHGKD--GIQRPLIVF 708 (868)
T ss_dssp HHHHC-CTTSCEEECCCSHHHHHHHHHHHHHS--SCCCCEEEE
T ss_pred HHhcC-CCCCCEEEEeCCHHHHHHHHHHHHhc--CCCCcEEEE
Confidence 32221 2555554 557888988888887753 3 5897763
No 102
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=21.19 E-value=97 Score=26.36 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=26.7
Q ss_pred CeEEEEEcccccccchHHHHHHHHHHCCCCeEEEEEc
Q 016175 193 TVTFALYGDGAANQGQLFEALNIAALWDLPAILVCEN 229 (394)
Q Consensus 193 ~~vv~l~GDGa~~eG~~~Ealn~Aa~~~LpvI~vv~N 229 (394)
.++|+ ..| ....|..|| +.+|...+.||+.+..+
T Consensus 70 D~vvA-~l~-~~d~Gt~~E-iG~A~algkPV~~l~~~ 103 (152)
T 4fyk_A 70 DVVVA-EVT-QPSLGVGYE-LGRAVALGKPILCLFRP 103 (152)
T ss_dssp SEEEE-ECS-SCCHHHHHH-HHHHHHTTCCEEEEECG
T ss_pred CEEEE-eCC-CCCCCHHHH-HHHHHHcCCeEEEEEeC
Confidence 34555 556 567899999 99999999999888774
No 103
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=20.83 E-value=1.3e+02 Score=25.26 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=25.2
Q ss_pred CCeEEEEEcccccccch--HHHHHHHHHHCCCCeEEE
Q 016175 192 ETVTFALYGDGAANQGQ--LFEALNIAALWDLPAILV 226 (394)
Q Consensus 192 ~~~vv~l~GDGa~~eG~--~~Ealn~Aa~~~LpvI~v 226 (394)
...+++++.||..+.+. ..+++..+...++++..|
T Consensus 110 ~~~~iillTDG~~~~~~~~~~~~~~~~~~~gi~i~~i 146 (198)
T 1n3y_A 110 AAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAI 146 (198)
T ss_dssp SEEEEEEEESSCCBSCSSCHHHHHHHHHHTTCEEEEE
T ss_pred CceEEEEECCCCCCCCcccHHHHHHHHHHCCCEEEEE
Confidence 35789999999977443 467777777777776444
No 104
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=20.39 E-value=2.3e+02 Score=26.13 Aligned_cols=34 Identities=15% Similarity=0.239 Sum_probs=28.6
Q ss_pred EEEEcccc--cccchHHHHHHHHHHCCCCeEEEEEcC
Q 016175 196 FALYGDGA--ANQGQLFEALNIAALWDLPAILVCENN 230 (394)
Q Consensus 196 v~l~GDGa--~~eG~~~Ealn~Aa~~~LpvI~vv~NN 230 (394)
|++--||+ .+.|.+.=+|.+|..++ .|.|+|.+.
T Consensus 3 i~ir~Da~~~IG~GHvmRcl~LA~~l~-~v~F~~~~~ 38 (282)
T 3hbm_A 3 VLFRSDSSSQIGFGHIKRDLVLAKQYS-DVSFACLPL 38 (282)
T ss_dssp EEEEECCBTTTBSHHHHHHHHHHTTCS-SEEEEECCC
T ss_pred EEEEEecCCCccccHHHHHHHHHHHHH-hCEEEEecC
Confidence 56777888 67789999999999999 899998653
No 105
>3hht_B NitrIle hydratase beta subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} SCOP: b.34.4.4 PDB: 2dpp_B 1v29_B
Probab=20.26 E-value=1.7e+02 Score=26.63 Aligned_cols=26 Identities=19% Similarity=0.263 Sum_probs=22.9
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHH
Q 016175 321 IERIRKLILAHDLATEKELKDIEKEV 346 (394)
Q Consensus 321 i~~~~~~L~~~g~~t~~~l~~i~~e~ 346 (394)
+.-+.+.|++.|++|++||++..+++
T Consensus 77 L~ale~lLvekGvit~~EL~~r~~~~ 102 (229)
T 3hht_B 77 IATVAYNLVDTGVLDEKELDERTEVF 102 (229)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 57899999999999999999887764
Done!