Query 016176
Match_columns 394
No_of_seqs 183 out of 429
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 09:11:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016176.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016176hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bij_A Uncharacterized protein 99.0 6.1E-10 2.1E-14 107.7 7.5 146 37-218 53-262 (285)
2 4f6o_A Metacaspase-1; rossmann 98.4 3.1E-07 1.1E-11 91.5 6.9 61 65-127 125-201 (350)
3 4af8_A Metacaspase MCA2; hydro 98.4 4.9E-07 1.7E-11 90.6 8.2 143 38-202 148-332 (367)
4 3uoa_B Mucosa-associated lymph 98.2 7.1E-06 2.4E-10 82.8 11.5 137 37-202 47-200 (390)
5 1m72_A Caspase-1; caspase, cys 95.4 0.029 9.9E-07 53.7 7.2 141 37-202 76-233 (272)
6 3h11_B Caspase-8; cell death, 95.3 0.038 1.3E-06 52.8 7.5 143 37-203 69-236 (271)
7 1f1j_A Caspase-7 protease; cas 94.7 0.037 1.3E-06 53.9 5.9 142 37-203 114-273 (305)
8 2j32_A Caspase-3; Pro-caspase3 94.6 0.036 1.2E-06 52.2 5.5 142 37-203 61-217 (250)
9 3sir_A Caspase; hydrolase; 2.6 94.5 0.098 3.4E-06 49.5 8.2 119 66-203 84-224 (259)
10 2nn3_C Caspase-1; cysteine pro 94.3 0.057 1.9E-06 52.7 6.2 141 37-202 104-261 (310)
11 4ehd_A Caspase-3; caspase, apo 94.2 0.096 3.3E-06 50.2 7.4 141 37-202 89-244 (277)
12 3od5_A Caspase-6; caspase doma 94.0 0.11 3.7E-06 49.8 7.4 142 37-203 66-235 (278)
13 1nw9_B Caspase 9, apoptosis-re 93.5 0.17 5.8E-06 48.2 7.7 79 37-124 66-152 (277)
14 2fp3_A Caspase NC; apoptosis, 93.2 0.16 5.4E-06 49.6 7.0 80 37-124 104-188 (316)
15 3e4c_A Caspase-1; zymogen, inf 91.9 0.4 1.4E-05 46.4 8.1 81 37-125 102-188 (302)
16 2h54_A Caspase-1; allosteric s 88.4 0.4 1.4E-05 42.9 4.3 80 37-124 85-170 (178)
17 3h11_A CAsp8 and FADD-like apo 80.9 2.1 7.1E-05 40.8 5.7 78 37-122 74-154 (272)
18 1pyo_A Caspase-2; apoptosis, c 72.4 1.7 6E-05 38.4 2.4 81 37-125 78-159 (167)
19 1qtn_A Caspase-8; apoptosis, d 67.1 2.1 7.1E-05 37.7 1.7 80 37-125 75-155 (164)
20 3p45_A Caspase-6; protease, hu 60.0 5 0.00017 36.0 2.8 78 38-125 90-168 (179)
21 2dko_A Caspase-3; low barrier 52.7 3.6 0.00012 35.5 0.6 77 38-124 62-139 (146)
22 2ql9_A Caspase-7; cysteine pro 42.2 6.9 0.00024 34.8 0.7 78 37-124 89-167 (173)
23 3m7v_A Phosphopentomutase; str 24.7 23 0.00078 33.3 1.2 22 60-81 324-345 (413)
24 4gdk_A Ubiquitin-like protein 23.2 44 0.0015 26.4 2.4 35 37-82 28-62 (91)
25 3sl9_C B-cell CLL/lymphoma 9 p 22.0 94 0.0032 21.9 3.6 27 284-310 12-38 (55)
No 1
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=98.98 E-value=6.1e-10 Score=107.72 Aligned_cols=146 Identities=14% Similarity=0.170 Sum_probs=104.1
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCC-------------CccCCCCCCCCCHHHHHHHHHH
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP-------------GVLGMPNMPYVYAMEFIDVLKK 103 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~-------------g~l~fp~~~~l~~~dl~~~l~~ 103 (394)
.+.|.+++++.|..-. -...++|.+||||+|||.. ++|...|+. |..++|.+.|+.
T Consensus 53 ~~~t~~~i~~al~~l~----------~~~~~~D~~~~yfSGHG~~~~~~~g~e~dg~~~~l~p~D~~-i~~~~l~~~l~~ 121 (285)
T 3bij_A 53 KAATRAKVIDAIGKAA----------KALGKGDIFMLSYSGHGGQVPDTSNDEPDGVDETWCLFDGE-LIDDELYALLGK 121 (285)
T ss_dssp GGCCHHHHHHHHHHHH----------HHCCTTCEEEEEEESCEEEEECTTSCCTTCEEEEEECSSSE-EEHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHH----------HhCCCCCEEEEEEcCCcccccCCCCCccCCCcceEEecCCC-ccHHHHHHHHHh
Confidence 4578899988886211 1346789999999999962 355555654 778899988876
Q ss_pred HHHhcCCCcEEEEEecccccccccc----------------------cCC-----------------------------C
Q 016176 104 KHAAKSYKGMVIYVEACESGSIFEG----------------------VMP-----------------------------K 132 (394)
Q Consensus 104 M~~~~~y~~~v~~ieaC~SgSm~~~----------------------~l~-----------------------------~ 132 (394)
|. .-+++++++|+|+||++.++ .+| .
T Consensus 122 l~---~~~~~~vilD~C~SG~~~~~~p~~~~~~~~~~~~~~g~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (285)
T 3bij_A 122 FA---AGVRVLVFSDSCHSGTVVKMAYYNGTTAARSAGPDEGEIRYRAMPQSVAMRTYRANREFYDTIQQKTKKVDLADV 198 (285)
T ss_dssp SC---SSCEEEEEEECCCCCCHHHHHHTTC-------------CEESBCCHHHHHHHHHHTHHHHHHHHHHCCCCCTTTC
T ss_pred cc---CCCeEEEEEecCCCCccccccccccccccccccccccccceeecCchhhhhhhhcchhHHHHHhhhcccccccCC
Confidence 62 35789999999999998762 011 1
Q ss_pred CCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhcccccCCCccccHHHHHHHHHhhhccCCCCCCCCc
Q 016176 133 DLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSNFNNYNSGSH 212 (394)
Q Consensus 133 ~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~tl~~~~~~v~~~t~~~~~~~~~Sh 212 (394)
..++++++|+.++|.||-.- .- -.||.+.++-.... -...|+.++++.|++.+.. .+|
T Consensus 199 ~~~~i~lsa~~~~q~A~e~~----------~~-----G~FT~aLl~~L~~~-~~~~s~~~l~~~v~~~~~~------~Q~ 256 (285)
T 3bij_A 199 KASILLISGCQDNQLSQDGA----------FN-----GAFTGQLLRVWKNG-LYKGSYRSFHKAIVRRMPP------DQT 256 (285)
T ss_dssp SSEEEEEESSCTTSCCEECS----------SS-----CHHHHHHHHHHGGG-TCCSCHHHHHHHHHHHSCT------TCC
T ss_pred CCCEEEEEeCCCCccccccc----------cC-----CHHHHHHHHHHhhC-CCCcCHHHHHHHHHHhcCC------CCC
Confidence 24689999999999998531 11 36888877643322 2357999999999988752 478
Q ss_pred cccccC
Q 016176 213 VMEYGN 218 (394)
Q Consensus 213 v~~yGd 218 (394)
++.||.
T Consensus 257 P~~~~~ 262 (285)
T 3bij_A 257 PNFFTA 262 (285)
T ss_dssp CEEEEE
T ss_pred cceeCC
Confidence 888875
No 2
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=98.40 E-value=3.1e-07 Score=91.47 Aligned_cols=61 Identities=26% Similarity=0.542 Sum_probs=44.1
Q ss_pred CCCCCeEEEEeecCCCC----------C---ccCCCCC---CCCCHHHHHHHHHHHHHhcCCCcEEEEEeccccccccc
Q 016176 65 SKANDRIFIFYSDHGGP----------G---VLGMPNM---PYVYAMEFIDVLKKKHAAKSYKGMVIYVEACESGSIFE 127 (394)
Q Consensus 65 s~~~D~VfiY~tdHG~~----------g---~l~fp~~---~~l~~~dl~~~l~~M~~~~~y~~~v~~ieaC~SgSm~~ 127 (394)
..++|.+||||+|||.. | .|.-.|. ..|..+||.+.|.... .+=.++++++|+|+||++.+
T Consensus 125 a~pgD~llfYFSGHG~q~~d~~gdE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l--~~g~~vt~IlD~ChSGt~ld 201 (350)
T 4f6o_A 125 AQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPL--QQGVRLTALFDSCHSGTVLD 201 (350)
T ss_dssp CCTTCEEEEEEESCEEEC-----------CEEECCTTHHHHCCEEHHHHHHHHTTTC--CTTCEEEEEECSSSCTTTTC
T ss_pred CCCCCEEEEEEcCCceeccCCCCCcccCCceEEEeccCCcCCcccHHHHHHHHHhhc--CCCCeEEEEEccCCCCcccc
Confidence 36899999999999972 2 2433341 2478888888776321 23468999999999999975
No 3
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A
Probab=98.39 E-value=4.9e-07 Score=90.61 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=90.9
Q ss_pred CCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCC---------Cc---cCCCCC---CCCCHHHHHHHH-
Q 016176 38 HVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP---------GV---LGMPNM---PYVYAMEFIDVL- 101 (394)
Q Consensus 38 ~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~---------g~---l~fp~~---~~l~~~dl~~~l- 101 (394)
..|.+|+++.|.-- +-...++|.+||||+|||.. |+ |.-.|. ..|..+||.+.|
T Consensus 148 ~pTr~nI~~aL~~L----------~~~a~pgD~l~fyFSGHG~q~~d~~de~dg~De~LvP~D~~~~g~I~ddeL~~lLv 217 (367)
T 4af8_A 148 QPTRDNIVRYMAWL----------VKDAKPGDVLFFHYSGHGTQCKSRGDSDEKYDQCIAPVDFQKSGCIVDDDIHKLLF 217 (367)
T ss_dssp CCCHHHHHHHHHHH----------HHTCCTTCEEEEEEESCEEEECCC-----CCEEEECCTTHHHHCCEEHHHHHHHHT
T ss_pred CCCHHHHHHHHHHH----------HHhCCCCCEEEEEEcCCcCccCCCCCCCCCcceEEEeecCCcCCCccHHHHHHHHH
Confidence 45666666666411 01346899999999999983 22 333331 247777888774
Q ss_pred HHHHHhcCCCcEEEEEecccccccccccC-----------------------CCCCCEEEEeccCCCCccccccCCCCCC
Q 016176 102 KKKHAAKSYKGMVIYVEACESGSIFEGVM-----------------------PKDLDIYVTTASNAQESSFGTYCPGMDP 158 (394)
Q Consensus 102 ~~M~~~~~y~~~v~~ieaC~SgSm~~~~l-----------------------~~~~nv~~~tas~~~EsSy~~~~~~~~~ 158 (394)
+.+ ..=.++++++|+|+||++.+--. +..-+|+.++|+..+|.|.-..-..
T Consensus 218 ~~l---~~g~~v~vIlD~ChSGt~~dlp~~~~~r~~~~~~~~~~~~~~~~~~~~~~~vi~~Sac~d~QtSad~~~~~--- 291 (367)
T 4af8_A 218 SRL---PEKVRLTAVFDCGHSGSIMDLPFTYVCSGGEQASGTPHMKRIREGNDVLGDVMMISGCADEQTSADVKNTA--- 291 (367)
T ss_dssp TTC---CTTCEEEEEEECTTCCCCTTCSEEEECCTTCCTTSCCCCEECSSCCCCCSEEEEEEEECCCSCCCCCC------
T ss_pred Hhc---cCCCEEEEEEeCCCCCcccccccccccccccccccchhhhhhccCCCCCCCEEEEEecCCCCchhhhhccc---
Confidence 333 22368999999999999976100 0123578999999999887652100
Q ss_pred CCCCCc---ccchhhhhhhhhhcccccCCCccccHHHHHHHHHhhhc
Q 016176 159 SPPPEY---ITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTS 202 (394)
Q Consensus 159 ~~~~~~---~t~lgD~fs~~wme~~~~~~~~~~tl~~~~~~v~~~t~ 202 (394)
.+ +.--.-.||+++++-... .+..|..++++.++....
T Consensus 292 ----~f~~g~~~~~GafTyali~~L~~--~~~~Ty~~Ll~~vr~~l~ 332 (367)
T 4af8_A 292 ----TFGTGSTGAGGAATQCITCMLMN--NQSLSYGKLLIETRDMLK 332 (367)
T ss_dssp --------CCCBCBSHHHHHHHHHHHC--CSCCBHHHHHHHHHHHHH
T ss_pred ----cccccccCcccHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHH
Confidence 00 011235799998875532 356799999998887664
No 4
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A*
Probab=98.20 E-value=7.1e-06 Score=82.78 Aligned_cols=137 Identities=11% Similarity=0.134 Sum_probs=92.6
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCC----CccCCCCCC-------CCCHHHHHHHHHHHH
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP----GVLGMPNMP-------YVYAMEFIDVLKKKH 105 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~----g~l~fp~~~-------~l~~~dl~~~l~~M~ 105 (394)
.++|.+++.+.|.--. .+ ..+.|.+++||+|||.. ++|.--|.. -|..++|.+.|+.
T Consensus 47 ~DlT~~eI~~aL~~f~-------~~---~~~~D~~l~yfsGHG~~~~g~~yL~p~Da~~~~~~~~~isl~~Ll~~l~~-- 114 (390)
T 3uoa_B 47 LDLTEYEMRNAVDEFL-------LL---LDKGVYGLLYYAGHGYENFGNSFMVPVDAPNPYRSENCLCVQNILKLMQE-- 114 (390)
T ss_dssp ESCCHHHHHHHHHHHH-------HT---CCTTCEEEEEEESCEEEETTEEEECCTTCCSSCCGGGSEEHHHHHHHHHH--
T ss_pred ecCCHHHHHHHHHHHH-------hh---CCCCCEEEEEEecCccccCCcceEEecCCCccccccceeeHHHHHHHHHh--
Confidence 4688999988887211 11 24679999999999954 454433432 2556666665554
Q ss_pred HhcCCCcEEEEEecccccccccc------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhcc
Q 016176 106 AAKSYKGMVIYVEACESGSIFEG------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMED 179 (394)
Q Consensus 106 ~~~~y~~~v~~ieaC~SgSm~~~------~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~ 179 (394)
..=|..+|++|||+++..+.+ .+|...+++...|+.+++.||-..-++ .- |-+|+....+-
T Consensus 115 --~~~K~kL~ILDACrg~~~~~~~~~~~~~ip~~ad~Li~yAT~pG~~A~r~~~d~-------~~----gS~FtqaL~e~ 181 (390)
T 3uoa_B 115 --KETGLNVFLLDMCRKRNDYDDTIPILDALKVTANIVFGYATCQGAEAFEIQHSG-------LA----NGIFMKFLKDR 181 (390)
T ss_dssp --TTCSEEEEEEESCCCCCTTCCCCCCCCCCCCCSCEEEEESSCTTCCCEECSSCT-------TC----CCHHHHHHTTT
T ss_pred --cCCCceEEEEECCCCCCcccccccccccCcccCCcEEEEEcCCCcEeeecCCCC-------CC----CCHHHHHHHHH
Confidence 345678999999999755542 245567899999999999999763211 11 23566666653
Q ss_pred cccCCCccccHHHHHHHHHhhhc
Q 016176 180 SETHNLKRETISQQYQAVKERTS 202 (394)
Q Consensus 180 ~~~~~~~~~tl~~~~~~v~~~t~ 202 (394)
... ..+|.++|..|.+++.
T Consensus 182 L~~----~~dl~~LLt~Vn~~Va 200 (390)
T 3uoa_B 182 LLE----DKKITVLLDEVAEDMG 200 (390)
T ss_dssp TTC----SSCHHHHHHHHHHHHT
T ss_pred Hcc----CCCHHHHHHHHHHHHh
Confidence 322 6889999999999985
No 5
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B
Probab=95.37 E-value=0.029 Score=53.66 Aligned_cols=141 Identities=11% Similarity=0.151 Sum_probs=81.1
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+.++|+--. .+ .-...|-+++||.+||..|+|.--|+. +.-++|.+.|..-. ..-.=|=-+|
T Consensus 76 ~dlt~~em~~~l~~~~-------~~--dh~~~d~~v~~~lsHG~~~~i~~~D~~-v~l~~i~~~f~~~~cpsL~gKPKlf 145 (272)
T 1m72_A 76 PNLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTHGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGKPKLF 145 (272)
T ss_dssp ESCCHHHHHHHHHHHH-------TS--CCTTEEEEEEEEESCEETTEEECSSSE-ECTTHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCcCHHHHHHHHHHHH-------Hh--hcCCCCEEEEEEcCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCCceEE
Confidence 3566666666665211 11 113457788999999999988777774 66666666554200 0011234578
Q ss_pred EEecccccccccc----------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhcc
Q 016176 116 YVEACESGSIFEG----------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMED 179 (394)
Q Consensus 116 ~ieaC~SgSm~~~----------------~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~ 179 (394)
+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.-|+. |.-...+.
T Consensus 146 fiqACRg~~~~~g~~~~~~~~d~~~~~~~~iP~~aD~Li~ysT~pG~vs~r~----------~~~GS~----fiq~L~~~ 211 (272)
T 1m72_A 146 FIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN----------TTRGSW----FMQALCEE 211 (272)
T ss_dssp EEESCSSSBCBCCEEEEC---------CEEECTTCSEEEEESSCTTBCCEEE----------TTTEEH----HHHHHHHH
T ss_pred EEeCCCCCcccCCccccccccccccccccccCCCCCEEEEEeCCCCcEeecC----------CCCCCH----HHHHHHHH
Confidence 8999986443111 14444567777777777666643 122332 22222221
Q ss_pred cccCCCccccHHHHHHHHHhhhc
Q 016176 180 SETHNLKRETISQQYQAVKERTS 202 (394)
Q Consensus 180 ~~~~~~~~~tl~~~~~~v~~~t~ 202 (394)
.. +.-....|.++|..|.+++.
T Consensus 212 l~-~~~~~~dl~~ilt~V~~~V~ 233 (272)
T 1m72_A 212 LR-YAGTERDILTLLTFVCQKVA 233 (272)
T ss_dssp HH-HHTTTSCHHHHHHHHHHHHH
T ss_pred HH-hhCCCCCHHHHHHHHHHHHH
Confidence 11 12245789999999998885
No 6
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B*
Probab=95.25 E-value=0.038 Score=52.84 Aligned_cols=143 Identities=17% Similarity=0.196 Sum_probs=80.2
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+..+|+--. .+ .-...|-++++|.+||..|.|.--|+..+.-++|...|..-. ..-.=|=-+|
T Consensus 69 ~dlt~~em~~~l~~~~-------~~--~h~~~d~~v~~ilSHG~~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gKPKlf 139 (271)
T 3h11_B 69 DDCTVEQIYEILKIYQ-------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVF 139 (271)
T ss_dssp ESCCHHHHHHHHHHHH-------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHHHH-------Hh--cCCCCCEEEEEEEcCCcCCEEEecCCCeecHHHHHHHhhhccChhhcCCccEE
Confidence 4677777777776211 11 113467788888999999988776765465555555443100 0012234589
Q ss_pred EEecccccccccc-----------------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhh
Q 016176 116 YVEACESGSIFEG-----------------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLY 172 (394)
Q Consensus 116 ~ieaC~SgSm~~~-----------------------~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~f 172 (394)
+|.||...-+-.+ .+|...++++.=|+-++--||-. +.-|+..+-.+
T Consensus 140 fiQACRG~~~~~gv~~~~~~~~~~~~e~d~~~~~~~~iP~~aD~Li~yST~pG~vs~R~----------~~~GS~fIq~L 209 (271)
T 3h11_B 140 FIQACQGDNYQKGIPVETASEEQPYLEMALSSPQTRYIPDEADFLLGMATVNNCVSYRN----------PAEGTWYIQSL 209 (271)
T ss_dssp EEESCCSSBCC----------------------CCCCSCSSSSEEEEESSCTTBCCEEE----------TTTEEHHHHHH
T ss_pred EEeccCCCcccCCceeccCCccccccccccccccccccCCCCceEEEEECCCCceeecC----------CCCCcHHHHHH
Confidence 9999976433111 24444566666666666666543 12233322222
Q ss_pred hhhhhcccccCCCc-cccHHHHHHHHHhhhcc
Q 016176 173 SVAWMEDSETHNLK-RETISQQYQAVKERTSN 203 (394)
Q Consensus 173 s~~wme~~~~~~~~-~~tl~~~~~~v~~~t~~ 203 (394)
.-.+.+ .-+ ...|.++|..|.+++..
T Consensus 210 ~~~l~~-----~~~~~~dl~~ilt~Vn~~V~~ 236 (271)
T 3h11_B 210 CQSLRE-----RCPRGDDILTILTEVNYEVSN 236 (271)
T ss_dssp HHHHHH-----HGGGTCCHHHHHHHHHHHHHT
T ss_pred HHHHHH-----hCCCCCCHHHHHHHHHHHHhh
Confidence 111111 113 57899999999998863
No 7
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A*
Probab=94.70 E-value=0.037 Score=53.89 Aligned_cols=142 Identities=13% Similarity=0.150 Sum_probs=79.3
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+.++|+- .. .+ . -...|-+++||.+||..|+|.--|+. +.-++|...|..-. ..-.=|=-+|
T Consensus 114 ~dlt~~em~~~l~~-~~------~~-~-h~~~d~~vv~ilsHG~~~~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlf 183 (305)
T 1f1j_A 114 NDCSCAKMQDLLKK-AS------EE-D-HTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRSKTLLEKPKLF 183 (305)
T ss_dssp ESCCHHHHHHHHHH-HH------HS-C-GGGEEEEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCcCHHHHHHHHHH-HH------Hh-h-cCCCCEEEEEEecCCCCCeEEecCCe-EEHHHHHHHhhhccChhhcCCceEE
Confidence 45666666666662 11 11 1 12356788999999999988666663 66566554443100 0001234588
Q ss_pred EEecccccccccc-----------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhc
Q 016176 116 YVEACESGSIFEG-----------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWME 178 (394)
Q Consensus 116 ~ieaC~SgSm~~~-----------------~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme 178 (394)
+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.-|+. |.-...+
T Consensus 184 fiQACRG~~~~~g~~~~~~~~~~~~~~~~~~ip~~aD~LiayST~pG~vs~r~----------~~~GS~----FiqaL~~ 249 (305)
T 1f1j_A 184 FIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRS----------PGRGSW----FVQALCS 249 (305)
T ss_dssp EEESCCSSBCBCCBC---------------CBCTTTTEEEEESSCTTBCCEEE----------TTTEEH----HHHHHHH
T ss_pred EeccccCCcccCCccccCCcccccccccccccCCCCCEEEEEECCCCeeccCC----------CCCCCH----HHHHHHH
Confidence 9999987543222 23444567777777777666643 122322 2222222
Q ss_pred ccccCCCccccHHHHHHHHHhhhcc
Q 016176 179 DSETHNLKRETISQQYQAVKERTSN 203 (394)
Q Consensus 179 ~~~~~~~~~~tl~~~~~~v~~~t~~ 203 (394)
-.. +......|.++|..|.+++..
T Consensus 250 ~l~-~~~~~~dl~~ilt~Vn~~V~~ 273 (305)
T 1f1j_A 250 ILE-EHGKDLEIMQILTRVNDRVAR 273 (305)
T ss_dssp HHH-HHTTTSCHHHHHHHHHHHHHH
T ss_pred HHH-hhCCCCCHHHHHHHHHHHHHH
Confidence 111 122447899999999988853
No 8
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A
Probab=94.65 E-value=0.036 Score=52.24 Aligned_cols=142 Identities=10% Similarity=0.142 Sum_probs=79.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+.+.|+-- . .+ .-...|-+++||.+||..|.|.--|+ .+.-++|...|..-. ..-.=|=-+|
T Consensus 61 ~dlt~~em~~~l~~~-~------~~--~~~~~d~~v~~~lsHG~~g~i~~~D~-~v~l~~i~~~f~~~~cp~L~gKPKlf 130 (250)
T 2j32_A 61 NDLTREEIVELMRDV-S------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLF 130 (250)
T ss_dssp ESCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEECCCCCCCeEEecCC-cEEHHHHHHHhccccChhHcCCCeEE
Confidence 466777777777621 1 11 11345778899999999997765565 355555555443200 0012234588
Q ss_pred EEecccccccccc--------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhcccc
Q 016176 116 YVEACESGSIFEG--------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSE 181 (394)
Q Consensus 116 ~ieaC~SgSm~~~--------------~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~ 181 (394)
+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.-|+. |.-...+-..
T Consensus 131 ~iqACRg~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~ysT~pG~vs~r~----------~~~gS~----fiq~L~~~l~ 196 (250)
T 2j32_A 131 IIQACRGTELDCGIATDSGVDDDMACHKIPVEADFLYAYSTAPGYYSWRN----------SKDGSW----FIQSLCAMLK 196 (250)
T ss_dssp EEESCSEEECBCCCCC----------CCCCTTTTEEEEESSCTEECCEEE----------TTTEEH----HHHHHHHHHH
T ss_pred EEecccCCcccCCccccCCccccccccccCCCCCEEEEEeCCCccEEecC----------CCCCcH----HHHHHHHHHH
Confidence 9999986432111 24544567777777776666653 122332 2222222111
Q ss_pred cCCCccccHHHHHHHHHhhhcc
Q 016176 182 THNLKRETISQQYQAVKERTSN 203 (394)
Q Consensus 182 ~~~~~~~tl~~~~~~v~~~t~~ 203 (394)
+.-+...|.++|..|.+++..
T Consensus 197 -~~~~~~dl~~ilt~V~~~V~~ 217 (250)
T 2j32_A 197 -QYADKLEFMHILTRVNRKVAT 217 (250)
T ss_dssp -HHTTTSCHHHHHHHHHHHHHH
T ss_pred -HhCCCCCHHHHHHHHHHHHHH
Confidence 112457899999999988853
No 9
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A
Probab=94.49 E-value=0.098 Score=49.55 Aligned_cols=119 Identities=16% Similarity=0.192 Sum_probs=66.4
Q ss_pred CCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHHHhc----CCCcEEEEEecccccccccc-------------
Q 016176 66 KANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKHAAK----SYKGMVIYVEACESGSIFEG------------- 128 (394)
Q Consensus 66 ~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~~~~----~y~~~v~~ieaC~SgSm~~~------------- 128 (394)
...|-++++|.+||..|.|.=-|+. -.|.+.+..+...+ .=|=-+|+|+||...-+-.+
T Consensus 84 ~~~d~~v~~~lsHG~~g~i~~~D~~----v~l~~i~~~f~~~~cpsL~gKPKlf~iQACRG~~~~~g~~~~~~~~~~dg~ 159 (259)
T 3sir_A 84 SDSDCILVAILSHGEMGYIYAKDTQ----YKLDNIWSFFTANHCPSLAGKPKLFFIQACQGDRLDGGVTMQRSQTETDGD 159 (259)
T ss_dssp TTEEEEEEEEEECTTCCCCCCTTHH----HHHHHTTGGGSTTTCGGGSSSCEEEEEEEETTSCEEC--------------
T ss_pred cCCCEEEEEEecCCCCCeEEeCCCc----EEHHHHHHHhhhccCccccCCCCEEEEecCCCCcccCCcccccCcccccCc
Confidence 4567889999999999977443432 23444333332211 22445899999997543222
Q ss_pred -----cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhcccccCCCccccHHHHHHHHHhhhcc
Q 016176 129 -----VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSETHNLKRETISQQYQAVKERTSN 203 (394)
Q Consensus 129 -----~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~~~~~~~~tl~~~~~~v~~~t~~ 203 (394)
.+|...++++.=|+-++.-||-. +.-|+. |.-...+-.. +.-..+.|.+++..|.+++..
T Consensus 160 ~~~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~GS~----fiq~L~~~l~-~~~~~~dl~~ilt~V~~~V~~ 224 (259)
T 3sir_A 160 SSMSYKIPVHADFLIAYSTVPGFYSWRN----------TTRGSW----FMQSLCAELA-ANGKRLDILTLLTFVCQRVAV 224 (259)
T ss_dssp ---CEECCCCTTEEEEEEEECCSCCCSS----------CCCSCH----HHHHHHHHHH-HHTTTSCHHHHHHHHHHHHHT
T ss_pred ccccccCCCCCCEEEEEECCCCeEeecC----------CCCCcH----HHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHH
Confidence 13444466666666666555543 122332 2222222111 112357899999999998863
No 10
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda}
Probab=94.29 E-value=0.057 Score=52.72 Aligned_cols=141 Identities=11% Similarity=0.135 Sum_probs=79.1
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+..+|+--. .+ .-...|-+++||.+||..|+|.--|+. +.-++|...|..-. ..-.=|=-+|
T Consensus 104 ~dlt~~em~~~l~~f~-------~~--dh~~~D~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlf 173 (310)
T 2nn3_C 104 PNLKSEEINKFIQQTA-------EM--DHSDADCLLVAVLTAGELGMLYAKDTH-YKPDNLWYYFTADKCPTLAGKPKLF 173 (310)
T ss_dssp ESCCHHHHHHHHHHHH-------SS--CGGGBSCEEEEEEEEEETTEEECSSCE-ECTHHHHGGGSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHHHH-------Hh--ccCCCCEEEEEEeCCCCCCEEEecCCc-EEHHHHHHHhccccChhhcCCceEE
Confidence 3566666666665211 11 112356788899999999988776764 66666655553200 0011234588
Q ss_pred EEecccccccccc----------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhcc
Q 016176 116 YVEACESGSIFEG----------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMED 179 (394)
Q Consensus 116 ~ieaC~SgSm~~~----------------~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~ 179 (394)
+|+||...-+-.+ .+|...++++.=|+.++.-||-. +.-|+. |.-...+.
T Consensus 174 fiQACRG~~~d~g~~~~~~~~d~~~~~~~~iP~~aD~LiayST~pG~vS~R~----------~~~GSw----FIqaL~~~ 239 (310)
T 2nn3_C 174 FIQACQGDRLDGGITLSRTETDGSPSTSYRIPVHADFLIAFSTVPGYFSWRN----------TTRGSW----FMQALCEE 239 (310)
T ss_dssp EEEEECCCCCCCCC-------------CCCCCCSTTEEEEECCCCCEEESSS----------SEEEEH----HHHHHHHH
T ss_pred EEecccCCccccCccccccccccccccccccCCCCCEEEEEeCCCCceeecC----------CCCCCH----HHHHHHHH
Confidence 9999986443111 13444466666666666555542 122322 32222221
Q ss_pred cccCCCccccHHHHHHHHHhhhc
Q 016176 180 SETHNLKRETISQQYQAVKERTS 202 (394)
Q Consensus 180 ~~~~~~~~~tl~~~~~~v~~~t~ 202 (394)
.. +.-....|.++|..|.+++.
T Consensus 240 l~-~~~~~~dl~~ilt~Vn~~V~ 261 (310)
T 2nn3_C 240 LR-YAGTERDILTLLTFVCQKVA 261 (310)
T ss_dssp HH-TTTTTSCHHHHHHHHHHHHH
T ss_pred HH-hhCCCCCHHHHHHHHHHHHH
Confidence 11 22345789999999998885
No 11
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A
Probab=94.18 E-value=0.096 Score=50.21 Aligned_cols=141 Identities=11% Similarity=0.170 Sum_probs=79.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+.++|+-- . .+ +-...|-++++|.+||..|.|.--|+. +.-++|...|..-. ..-.=|=-+|
T Consensus 89 ~dlt~~em~~~l~~f-~------~~--dh~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlf 158 (277)
T 4ehd_A 89 NDLTREEIVELMRDV-S------KE--DHSKRSSFVCVLLSHGEEGIIFGTNGP-VDLKKITNFFRGDRCRSLTGKPKLF 158 (277)
T ss_dssp ESCCHHHHHHHHHHH-H------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHHH-H------hh--cccCCCEEEEEEEcCCCCCEEEEeCCc-EeHHHHHHHhhhccCchhcCCccEE
Confidence 356666666666621 1 11 123457788899999999988766664 66555555443100 0012344588
Q ss_pred EEecccccccccc--------------cCCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccchhhhhhhhhhcccc
Q 016176 116 YVEACESGSIFEG--------------VMPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCLGDLYSVAWMEDSE 181 (394)
Q Consensus 116 ~ieaC~SgSm~~~--------------~l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~lgD~fs~~wme~~~ 181 (394)
+|+||...-+-.+ .+|...++++.=|+-++.-||-. +.-|+. |.-...+-..
T Consensus 159 fiQACRG~~~~~g~~~~~~~~~~~~~~~ip~~aD~Li~yST~pG~vs~r~----------~~~GS~----fIq~L~~~l~ 224 (277)
T 4ehd_A 159 IIQACRGTELDCGIETDSGVDDDMACHKIPVEADFLYACSTAPGYYSWRN----------SKDGSW----FIQSLCAMLK 224 (277)
T ss_dssp EEESCCSSBCBCCCCC----------CCCCTTTTEEEEESSCTTBCCEEE----------TTTEEH----HHHHHHHHHH
T ss_pred EEecCCCCcccCCccccCCccccccccccCCCCCEEEEEECCCCeEeecC----------CCCCcH----HHHHHHHHHH
Confidence 9999986543222 13444567777676666666643 122332 2222222111
Q ss_pred cCCCccccHHHHHHHHHhhhc
Q 016176 182 THNLKRETISQQYQAVKERTS 202 (394)
Q Consensus 182 ~~~~~~~tl~~~~~~v~~~t~ 202 (394)
+.-+...|.++|..|.+++.
T Consensus 225 -~~~~~~dl~~ilt~V~~~V~ 244 (277)
T 4ehd_A 225 -QYADKLEFMHILTRVNRKVA 244 (277)
T ss_dssp -HHTTTSCHHHHHHHHHHHHH
T ss_pred -HHCCCCCHHHHHHHHHHHHH
Confidence 11245789999999998886
No 12
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B*
Probab=94.01 E-value=0.11 Score=49.82 Aligned_cols=142 Identities=11% Similarity=0.058 Sum_probs=79.9
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+..+|+- .. .+ +-...|-++++|.+||..|.|.--|+. +.-++|.+.|..-. ..-.=|=-+|
T Consensus 66 ~dlt~~em~~~l~~-~~------~~--~h~~~d~~vv~ilSHG~~g~i~g~D~~-v~l~~I~~~f~~~~CpsL~gKPKlf 135 (278)
T 3od5_A 66 NDLKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIF 135 (278)
T ss_dssp ESCCHHHHHHHHHH-HH------HS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHHTTSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHH-HH------hh--cccCCCEEEEEEECCCCCCEEEEeCCe-EEHHHHHHHhccccChhhcCCCcEE
Confidence 46777888777773 11 11 114567788888999999988776775 66666665554200 0011234588
Q ss_pred EEeccccccccccc---------------------------CCCCCCEEEEeccCCCCccccccCCCCCCCCCCCcccch
Q 016176 116 YVEACESGSIFEGV---------------------------MPKDLDIYVTTASNAQESSFGTYCPGMDPSPPPEYITCL 168 (394)
Q Consensus 116 ~ieaC~SgSm~~~~---------------------------l~~~~nv~~~tas~~~EsSy~~~~~~~~~~~~~~~~t~l 168 (394)
+|+||...-+-.++ +|...++++.=|+-++.-||-. +.-|+..
T Consensus 136 fiQACRG~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~iP~~aD~Li~yST~pG~vs~R~----------~~~GS~f 205 (278)
T 3od5_A 136 IIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRE----------TVNGSWY 205 (278)
T ss_dssp EEESCCSSBCBCEECCC---------------------CCCEETTTTEEEEESSCTTBCCEEE----------TTTEEHH
T ss_pred EEecCCCCcccCCeecccccccccccccccccccccccccccCCCCCeEEEEeCCCCeEEecC----------CCCCcHH
Confidence 99999965432221 2223345555555555555433 1223322
Q ss_pred hhhhhhhhhcccccCCCccccHHHHHHHHHhhhcc
Q 016176 169 GDLYSVAWMEDSETHNLKRETISQQYQAVKERTSN 203 (394)
Q Consensus 169 gD~fs~~wme~~~~~~~~~~tl~~~~~~v~~~t~~ 203 (394)
+-.+.-.+-+ .-....|.++|..|.+++..
T Consensus 206 Iq~L~~~l~~-----~~~~~dl~~ilt~Vn~~V~~ 235 (278)
T 3od5_A 206 IQDLCEMLGK-----YGSSLEFTELLTLVNRKVSQ 235 (278)
T ss_dssp HHHHHHHHHH-----HTTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----hCCCCCHHHHHHHHHHHHHH
Confidence 2222111111 12457899999999998864
No 13
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A
Probab=93.46 E-value=0.17 Score=48.24 Aligned_cols=79 Identities=16% Similarity=0.208 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCC-------CccCCCCCCCCCHHHHHHHHHHHH-Hhc
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP-------GVLGMPNMPYVYAMEFIDVLKKKH-AAK 108 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~-------g~l~fp~~~~l~~~dl~~~l~~M~-~~~ 108 (394)
.++|.+.+..+|+-- . .+ .. ...|-++++|.+||.. |.|.--|+..+.-++|...|..-. ..-
T Consensus 66 ~dlt~~em~~~l~~~-~------~~-~h-~~~D~~vv~ilSHG~~~~~~~~~g~iy~~D~~~v~l~~i~~~f~~~~CpsL 136 (277)
T 1nw9_B 66 GDLTAKKMVLALLEL-A------RQ-DH-GALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSL 136 (277)
T ss_dssp ESCCHHHHHHHHHHH-H------HS-CC-TTCSEEEEEEEEEEECCCCSSSCCEEECTTSCEEEHHHHHHTTCTTTCGGG
T ss_pred cCCCHHHHHHHHHHH-H------Hh-hc-ccCCeEEEEEeCCCCccccccCCCcEEecCCceeeHHHHHHHhcccCChhH
Confidence 466777777777621 1 11 11 2347788888899987 666544554455555555443100 001
Q ss_pred CCCcEEEEEecccccc
Q 016176 109 SYKGMVIYVEACESGS 124 (394)
Q Consensus 109 ~y~~~v~~ieaC~SgS 124 (394)
.=|=-+|+|+||...-
T Consensus 137 ~gKPKlffiQACRG~~ 152 (277)
T 1nw9_B 137 GGKPKLFFIQACGGEQ 152 (277)
T ss_dssp TTSCEEEEEEEEC---
T ss_pred cCCCcEEEEeccCCCc
Confidence 2234588999998543
No 14
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster}
Probab=93.17 E-value=0.16 Score=49.61 Aligned_cols=80 Identities=10% Similarity=0.113 Sum_probs=44.2
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCC----CccCCCCCCCCCHHHHHHHHHHHH-HhcCCC
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGP----GVLGMPNMPYVYAMEFIDVLKKKH-AAKSYK 111 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~----g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~ 111 (394)
.++|.+.+.++|+--. .+ ..+...|-++++|.+||.. |.|.--|+..+.-++|...|..-. ..-.=|
T Consensus 104 ~dlt~~em~~~l~~f~-------~~-~h~~~~D~~vv~ilSHG~~~~g~g~i~g~D~~~v~l~~I~~~f~~~~CpsL~gK 175 (316)
T 2fp3_A 104 GNVNQDQFFKLLTMVT-------SS-SYVQNTECFVMVLMTHGNSVEGKEKVEFRDGSVVDMQKIKDHFQTAKCPYLVNK 175 (316)
T ss_dssp CSCCHHHHHHHHHHHH-------TS-HHHHTCSCEEEEEESCEECCTTCCEEECTTSCEEEHHHHHHTTSTTTCGGGTTS
T ss_pred cCCCHHHHHHHHHHHH-------HH-hhcCCCCEEEEEEccCCCccCCCCEEEeecCcEEeHHHHHHHhccccChhhcCC
Confidence 4556666666655111 11 1122567788888999998 888776775466666555543210 001223
Q ss_pred cEEEEEecccccc
Q 016176 112 GMVIYVEACESGS 124 (394)
Q Consensus 112 ~~v~~ieaC~SgS 124 (394)
=-+|+|+||...-
T Consensus 176 PKlffiQACRG~~ 188 (316)
T 2fp3_A 176 PKVLMFPFARGDE 188 (316)
T ss_dssp CEEEEESCC----
T ss_pred ceEEEEecCCCCc
Confidence 4588999998643
No 15
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=91.94 E-value=0.4 Score=46.42 Aligned_cols=81 Identities=19% Similarity=0.216 Sum_probs=45.7
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCC-----CCCCHHHHHHHHHHHH-HhcCC
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNM-----PYVYAMEFIDVLKKKH-AAKSY 110 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~-----~~l~~~dl~~~l~~M~-~~~~y 110 (394)
.++|.+.+.++|+--. .+ .+-...|-+++||.+||..|.|.=-|+ ..+.-++|...|..-. ..-.=
T Consensus 102 ~dlt~~em~~~l~~f~-------~~-~dh~~~d~~vv~~lsHG~~~~i~g~D~~~~~~~~v~l~~I~~~F~~~~CpsL~g 173 (302)
T 3e4c_A 102 KNLTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKD 173 (302)
T ss_dssp ESCCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEEEEEETTEEECTTCCSSSCCEECHHHHHHHTSTTTCGGGTT
T ss_pred eCCCHHHHHHHHHHHH-------hh-hccCCCCEEEEEEeccCcCCeEEeecccccCCcEEEHHHHHHHHhhhcchhhcC
Confidence 4667777777776211 11 111234668888999999986533342 2355555555554200 00023
Q ss_pred CcEEEEEeccccccc
Q 016176 111 KGMVIYVEACESGSI 125 (394)
Q Consensus 111 ~~~v~~ieaC~SgSm 125 (394)
|=-+|+|+||...-+
T Consensus 174 KPKlffIQACRG~~~ 188 (302)
T 3e4c_A 174 KPKVIIIQAARGDSP 188 (302)
T ss_dssp SCEEEEEEEECSSSC
T ss_pred CccEEEEECCCCCCC
Confidence 445889999997554
No 16
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=88.35 E-value=0.4 Score=42.94 Aligned_cols=80 Identities=20% Similarity=0.279 Sum_probs=46.5
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCC-----CCCHHHHHHHHHHHH-HhcCC
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMP-----YVYAMEFIDVLKKKH-AAKSY 110 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~-----~l~~~dl~~~l~~M~-~~~~y 110 (394)
.++|.+.+...|+--. .+ .+-...|-+++||.+||..|.|.-.|+. .+.-++|...|..-. ..-.=
T Consensus 85 ~dlt~~em~~~l~~f~-------~~-~d~~~~d~~v~~~lsHG~~g~i~g~D~~~~~~~~v~l~~I~~~f~~~~CpsL~g 156 (178)
T 2h54_A 85 KNLTASDMTTELEAFA-------HR-PEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKD 156 (178)
T ss_dssp ESCCHHHHHHHHHHHH-------TC-GGGGGCSCEEEEEESCBCSSCEECTTCCSSSCCEECHHHHHHHHSTTTCGGGTT
T ss_pred cCCCHHHHHHHHHHHH-------hh-hhcCCCCEEEEEEecCCCCCeEEeecCCcccCcEEEHHHHHHHHhhcCChhhcC
Confidence 4567777777766210 01 1113456788888999999877665652 355555555554210 00012
Q ss_pred CcEEEEEecccccc
Q 016176 111 KGMVIYVEACESGS 124 (394)
Q Consensus 111 ~~~v~~ieaC~SgS 124 (394)
|--+|+|+||..+-
T Consensus 157 KPKlffiqACRg~~ 170 (178)
T 2h54_A 157 KPKVIIIQACRGDS 170 (178)
T ss_dssp SCEEEEEESCSSSB
T ss_pred CceEEEEECCCCCC
Confidence 45588999999855
No 17
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=80.92 E-value=2.1 Score=40.76 Aligned_cols=78 Identities=8% Similarity=0.014 Sum_probs=50.1
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCC--CCCHHHHHHHHHHHH-HhcCCCcE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMP--YVYAMEFIDVLKKKH-AAKSYKGM 113 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~--~l~~~dl~~~l~~M~-~~~~y~~~ 113 (394)
.++|.+.+..+|+--.. . .+-...|-+++++.+||..|.|.=-|+. .+.-++|...|..=. ..-.=|=-
T Consensus 74 ~dlt~~em~~~l~~~~~------~--~dh~~~d~~v~~ilSHG~~g~i~g~D~~~~~v~l~~i~~~f~~~~CpsL~gKPK 145 (272)
T 3h11_A 74 LHLSMHGISQILGQFAC------M--PEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPK 145 (272)
T ss_dssp ESCBHHHHHHHHHHHHT------C--GGGGGCSEEEEEEEEEEETTEECBTSCCSSCEEHHHHHHHHSTTTCGGGTTSCE
T ss_pred eCCCHHHHHHHHHHHHh------c--cccCCCCEEEEEEEcCCCCCeEEEEcCCcceEeHHHHHHHhccccChhhcCCCc
Confidence 56788888888873111 0 1224578899999999999977665664 256666666554210 00123446
Q ss_pred EEEEecccc
Q 016176 114 VIYVEACES 122 (394)
Q Consensus 114 v~~ieaC~S 122 (394)
+|+|.||..
T Consensus 146 lffiQACRG 154 (272)
T 3h11_A 146 MFFIQNYVV 154 (272)
T ss_dssp EEEEEEEEC
T ss_pred EEEEECCCC
Confidence 899999985
No 18
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A
Probab=72.43 E-value=1.7 Score=38.37 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=50.3
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+...|+-- . .+ .+-...|-.++++.+||..|.|.-.|+..+.-++|...|..-. ..-.=|=-+|
T Consensus 78 ~dlt~~em~~~l~~~-~------~~-~dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~l~~i~~~F~~~~CpsL~gKPKlf 149 (167)
T 1pyo_A 78 CDQTAQEMQEKLQNF-A------QL-PAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMF 149 (167)
T ss_dssp ESCCHHHHHHHHHHH-H------TC-GGGGTSSEEEEEEESCEETTEEECTTSCEEEHHHHHHHTSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHHh-h------hh-hhccCCCEEEEEeCCCCCCCeEEEeCCCEEcHHHHHHHhcccCChhHcCCCeEE
Confidence 456677777666621 1 10 0113457889999999999988877876566666666654200 0012234589
Q ss_pred EEeccccccc
Q 016176 116 YVEACESGSI 125 (394)
Q Consensus 116 ~ieaC~SgSm 125 (394)
+|.||...-+
T Consensus 150 fiQACRG~~~ 159 (167)
T 1pyo_A 150 FIQACRGDET 159 (167)
T ss_dssp EEESCSSSBC
T ss_pred EEECCCCCCC
Confidence 9999987543
No 19
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A*
Probab=67.12 E-value=2.1 Score=37.73 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=50.5
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHHH-hcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKHA-AKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~~-~~~y~~~v~ 115 (394)
.++|.+.+..+|+-- . .+ .-...|-+++++..||..|.|.-.|+..+.-++|...|..-.- .-.=|=-+|
T Consensus 75 ~dlt~~em~~~l~~~-~------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~~~v~i~~i~~~F~~~~CpsL~gKPKlF 145 (164)
T 1qtn_A 75 DDCTVEQIYEILKIY-Q------LM--DHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVF 145 (164)
T ss_dssp ESCCHHHHHHHHHHH-H------HS--CCTTCSCEEEEEESCEETTEEECTTSCEEEHHHHHGGGSTTTCGGGTTSCEEE
T ss_pred cCCCHHHHHHHHHHH-H------Hh--hccCCCEEEEEeCCCCCCCEEEeeCCCEeeHHHHHHHhccccChhhcCCCeEE
Confidence 456677777766621 1 11 1134677889999999999888878765666777665542100 011234588
Q ss_pred EEeccccccc
Q 016176 116 YVEACESGSI 125 (394)
Q Consensus 116 ~ieaC~SgSm 125 (394)
+|.||...-.
T Consensus 146 fiQACRG~~~ 155 (164)
T 1qtn_A 146 FIQACQGDNY 155 (164)
T ss_dssp EEESCSSSBC
T ss_pred EEECCCCCCc
Confidence 9999997543
No 20
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens}
Probab=60.02 E-value=5 Score=35.96 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEEE
Q 016176 38 HVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVIY 116 (394)
Q Consensus 38 ~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~~ 116 (394)
++|.+.+..+|+- .. .+ .-...|-+++.+..||..|.|.--|+. +.-++|...|.--. ..-.=|=-+|+
T Consensus 90 dlt~~em~~~l~~-~~------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-v~l~~I~~~F~~~~CpsL~gKPKlFf 159 (179)
T 3p45_A 90 DLKAEELLLKIHE-VS------TV--SHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFI 159 (179)
T ss_dssp SCCHHHHHHHHHH-HH------TS--CCTTBSCEEEEEESCEETTEEECSSSE-EEHHHHHGGGSGGGCGGGTTSCEEEE
T ss_pred CCCHHHHHHHHHH-Hh------hh--hcCCCCEEEEEEeccCCCCEEEEECCE-EEHHHHHHhcccccChhhCCCCcEEE
Confidence 5667777766662 11 11 123568899999999999988887876 66666666554210 01122456789
Q ss_pred Eeccccccc
Q 016176 117 VEACESGSI 125 (394)
Q Consensus 117 ieaC~SgSm 125 (394)
|.||...-.
T Consensus 160 IQACRG~~~ 168 (179)
T 3p45_A 160 IQACRGNQH 168 (179)
T ss_dssp EECC-----
T ss_pred EECCCCCCC
Confidence 999997543
No 21
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ...
Probab=52.66 E-value=3.6 Score=35.50 Aligned_cols=77 Identities=12% Similarity=0.194 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEEE
Q 016176 38 HVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVIY 116 (394)
Q Consensus 38 ~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~~ 116 (394)
+.|.+.+..+|+--. .+ .-...|-.++++..||..|.|.-.|+ .+.-++|...|..-. ..-.=|=-+|+
T Consensus 62 dlt~~em~~~l~~~~-------~~--dh~~~dc~vv~ilSHG~~g~i~g~D~-~~~l~~i~~~F~~~~CpsL~gKPKlff 131 (146)
T 2dko_A 62 DLTREEIVELMRDVS-------KE--DHSKRSSFVCVLLSHGEEGIIFGTNG-PVDLKKITNFFRGDRCRSLTGKPKLFI 131 (146)
T ss_dssp SCCHHHHHHHHHHHH-------HS--CCTTEEEEEEEEESCEETTEEEETTE-EEEHHHHHHTTSTTTCGGGTTSCEEEE
T ss_pred CCCHHHHHHHHHHHH-------Hh--hcCCCCeEEEEeccCCCCCEEEEeCC-cEeHHHHHHHhccccChhhcCCCeEEE
Confidence 566666666665211 01 11345788999999999998887787 366666555443100 00122445889
Q ss_pred Eecccccc
Q 016176 117 VEACESGS 124 (394)
Q Consensus 117 ieaC~SgS 124 (394)
|.||...-
T Consensus 132 iQACRG~~ 139 (146)
T 2dko_A 132 IQACRGTE 139 (146)
T ss_dssp EESCCSSB
T ss_pred EECCCCCC
Confidence 99998754
No 22
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A
Probab=42.17 E-value=6.9 Score=34.79 Aligned_cols=78 Identities=9% Similarity=0.135 Sum_probs=47.4
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCCccCCCCCCCCCHHHHHHHHHHHH-HhcCCCcEEE
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPGVLGMPNMPYVYAMEFIDVLKKKH-AAKSYKGMVI 115 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g~l~fp~~~~l~~~dl~~~l~~M~-~~~~y~~~v~ 115 (394)
.++|.+.+..+|+- .. .+ .-...|-+++++..||..|.|.-.|+. +.-++|...|..-. ..-.=|=-+|
T Consensus 89 ~dlt~~em~~~l~~-~s------~~--dh~~~dc~vvvilSHG~~g~I~g~D~~-~~i~~I~~~F~~~~CpsL~gKPKlF 158 (173)
T 2ql9_A 89 NDCSCAKMQDLLKK-AS------EE--DHTNAACFACILLSHGEENVIYGKDGV-TPIKDLTAHFRGDRCKTLLEKPKLF 158 (173)
T ss_dssp ESCCHHHHHHHHHH-HH------TS--CCTTEEEEEEEEESCEETTEEEETTEE-EEHHHHHGGGSTTTCGGGTTSCEEE
T ss_pred eCCCHHHHHHHHHH-HH------Hh--hccCCCeEEEeecCCCCCCEEEEcCCc-EEHHHHHHHcCcccChhHcCCCeEE
Confidence 46677777777762 11 11 113457788999999999988777774 55555554442100 0012344588
Q ss_pred EEecccccc
Q 016176 116 YVEACESGS 124 (394)
Q Consensus 116 ~ieaC~SgS 124 (394)
+|.||...-
T Consensus 159 fIQACRG~~ 167 (173)
T 2ql9_A 159 FIQACRGTE 167 (173)
T ss_dssp EEESCCSSB
T ss_pred EEECCCCCC
Confidence 899998744
No 23
>3m7v_A Phosphopentomutase; structural genomics, nysgrc, cytoplasm, isomerase, manganese binding, PSI-2, protein structure initiative; 2.00A {Streptococcus mutans}
Probab=24.65 E-value=23 Score=33.32 Aligned_cols=22 Identities=18% Similarity=0.483 Sum_probs=17.5
Q ss_pred CceecCCCCCeEEEEeecCCCC
Q 016176 60 GKVVNSKANDRIFIFYSDHGGP 81 (394)
Q Consensus 60 ~kvl~s~~~D~VfiY~tdHG~~ 81 (394)
|++|+.=+++.|+||.+|||.+
T Consensus 324 g~~l~~L~entliiftsDnG~~ 345 (413)
T 3m7v_A 324 PEIIAAMKVDDLLLITADHGND 345 (413)
T ss_dssp HHHHHTCCTTEEEEEECSSBCC
T ss_pred HHHHHhcCCCCEEEEEccCCCC
Confidence 5666655678999999999964
No 24
>4gdk_A Ubiquitin-like protein ATG12; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_A
Probab=23.15 E-value=44 Score=26.44 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=27.1
Q ss_pred CCCCHHHHHHHHcCCCCCccCCCCceecCCCCCeEEEEeecCCCCC
Q 016176 37 EHVTAQNLYAVLLGDRKAVKGGSGKVVNSKANDRIFIFYSDHGGPG 82 (394)
Q Consensus 37 ~~Vt~~nfl~vL~G~~~~~~~~s~kvl~s~~~D~VfiY~tdHG~~g 82 (394)
.+.|...|+.+|+- | |+-.+++.||+|..+.-.|.
T Consensus 28 ~~~tv~~~~~~lRk----------r-L~l~~~~alFlyVnn~~~P~ 62 (91)
T 4gdk_A 28 RTRTIQGLIDFIKK----------F-LKLVASEQLFIYVNQSFAPS 62 (91)
T ss_dssp TTCBHHHHHHHHHH----------H-TTCCSSSCCEEEETTTBCCC
T ss_pred CCCCHHHHHHHHHH----------H-hCCCCCCeEEEEECCccCCC
Confidence 47899999999982 2 66688999999997655443
No 25
>3sl9_C B-cell CLL/lymphoma 9 protein; armadillo repeat, components of the WNT signaling pathway, B catenin, signaling protein, protein binding; 2.20A {Homo sapiens} PDB: 2gl7_C
Probab=22.03 E-value=94 Score=21.90 Aligned_cols=27 Identities=26% Similarity=0.388 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcc
Q 016176 284 TETMRHRKHLDASIDMIGVILFGPDKG 310 (394)
Q Consensus 284 ~~~l~~R~~id~~v~~I~~~l~~~~~~ 310 (394)
++.|+||.+.-+++..|..++|.+++.
T Consensus 12 ~eqlehrerslqtlrdi~r~~~pDdkd 38 (55)
T 3sl9_C 12 QEQLEHRERSLQTLRDIQRMLFPDEKE 38 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 355788888888999999999876543
Done!