BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016178
(394 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1I2N|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant N35a
pdb|1I2N|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant N35a
Length = 316
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 172/328 (52%), Gaps = 16/328 (4%)
Query: 58 STELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADS 117
+ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A +
Sbjct: 1 TDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTAPSLILNAAQIPE--YRKLIDDAVAWA 58
Query: 118 SCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKL 177
+ ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+KL
Sbjct: 59 KQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKL 117
Query: 178 YSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIF 237
Y++ + +R+L K+ STWQGI A+ LE EGI +LT ++SF +I F
Sbjct: 118 YNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPF 177
Query: 238 VGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF 297
VGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 178 VGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEIL 233
Query: 298 SLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLAS 357
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 234 ELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH----- 284
Query: 358 AMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 285 NQDPMAVDKLAEGIRKFAIDQEKLEKMI 312
>pdb|1ONR|A Chain A, Structure Of Transaldolase B
pdb|1ONR|B Chain B, Structure Of Transaldolase B
Length = 316
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 172/328 (52%), Gaps = 16/328 (4%)
Query: 58 STELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADS 117
+ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A +
Sbjct: 1 TDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAWA 58
Query: 118 SCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKL 177
+ ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+KL
Sbjct: 59 KQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKL 117
Query: 178 YSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIF 237
Y++ + +R+L K+ STWQGI A+ LE EGI +LT ++SF +I F
Sbjct: 118 YNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPF 177
Query: 238 VGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF 297
VGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 178 VGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEIL 233
Query: 298 SLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLAS 357
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 234 ELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH----- 284
Query: 358 AMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 285 NQDPMAVDKLAEGIRKFAIDQEKLEKMI 312
>pdb|3CWN|A Chain A, Escherichia Coli Transaldolase B Mutant F178y
pdb|3CWN|B Chain B, Escherichia Coli Transaldolase B Mutant F178y
Length = 337
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 173/329 (52%), Gaps = 16/329 (4%)
Query: 57 LSTELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALAD 116
++ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A
Sbjct: 21 MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAW 78
Query: 117 SSCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLK 176
+ + ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+K
Sbjct: 79 AKQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIK 137
Query: 177 LYSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQI 236
LY++ + +R+L K+ STWQGI A+ LE EGI +LT ++SF +I
Sbjct: 138 LYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISP 197
Query: 237 FVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDL 296
+VGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 198 YVGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEI 253
Query: 297 FSLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLA 356
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 254 LELAGCDRLTIAPTLLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH---- 305
Query: 357 SAMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 306 -NQDPMAVDKLAEGIRKFAIDQEKLEKMI 333
>pdb|1I2R|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant S176a
pdb|1I2R|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant S176a
Length = 316
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 172/328 (52%), Gaps = 16/328 (4%)
Query: 58 STELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADS 117
+ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A +
Sbjct: 1 TDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAWA 58
Query: 118 SCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKL 177
+ ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+KL
Sbjct: 59 KQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKL 117
Query: 178 YSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIF 237
Y++ + +R+L K+ STWQGI A+ LE EGI +LT ++SF +I F
Sbjct: 118 YNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLIAPF 177
Query: 238 VGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF 297
VGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 178 VGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEIL 233
Query: 298 SLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLAS 357
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 234 ELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH----- 284
Query: 358 AMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 285 NQDPMAVDKLAEGIRKFAIDQEKLEKMI 312
>pdb|1UCW|A Chain A, Complex Of Transaldolase With The Reduced Schiff-Base
Intermediate
pdb|1UCW|B Chain B, Complex Of Transaldolase With The Reduced Schiff-Base
Intermediate
Length = 317
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 172/329 (52%), Gaps = 16/329 (4%)
Query: 57 LSTELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALAD 116
++ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A
Sbjct: 1 MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAW 58
Query: 117 SSCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLK 176
+ + ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+K
Sbjct: 59 AKQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIK 117
Query: 177 LYSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQI 236
LY++ + +R+L + STWQGI A+ LE EGI +LT ++SF +I
Sbjct: 118 LYNDAGISNDRILIXLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISP 177
Query: 237 FVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDL 296
FVGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 178 FVGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEI 233
Query: 297 FSLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLA 356
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 234 LELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH---- 285
Query: 357 SAMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 286 -NQDPMAVDKLAEGIRKFAIDQEKLEKMI 313
>pdb|1I2Q|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant T156a
pdb|1I2Q|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant T156a
Length = 316
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 171/328 (52%), Gaps = 16/328 (4%)
Query: 58 STELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADS 117
+ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A +
Sbjct: 1 TDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAWA 58
Query: 118 SCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKL 177
+ ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+KL
Sbjct: 59 KQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKL 117
Query: 178 YSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIF 237
Y++ + +R+L K+ STWQGI A+ LE EGI +L ++SF +I F
Sbjct: 118 YNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLALLFSFAQARACAEAGVFLISPF 177
Query: 238 VGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF 297
VGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 178 VGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEIL 233
Query: 298 SLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLAS 357
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 234 ELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH----- 284
Query: 358 AMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 285 NQDPMAVDKLAEGIRKFAIDQEKLEKMI 312
>pdb|1I2O|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant E96a
pdb|1I2O|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant E96a
Length = 316
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 171/328 (52%), Gaps = 16/328 (4%)
Query: 58 STELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADS 117
+ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A +
Sbjct: 1 TDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAWA 58
Query: 118 SCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKL 177
+ ++ ++ +K VN+G ++ K+VPGR+ST VDARL+YDT I K L+KL
Sbjct: 59 KQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTAVDARLSYDTEASIAKAKRLIKL 117
Query: 178 YSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIF 237
Y++ + +R+L K+ STWQGI A+ LE EGI +LT ++SF +I F
Sbjct: 118 YNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPF 177
Query: 238 VGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF 297
VGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 178 VGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEIL 233
Query: 298 SLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLAS 357
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 234 ELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH----- 284
Query: 358 AMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 285 NQDPMAVDKLAEGIRKFAIDQEKLEKMI 312
>pdb|3KOF|A Chain A, Crystal Structure Of The Double Mutant F178yR181E OF
E.COLI Transaldolase B
pdb|3KOF|B Chain B, Crystal Structure Of The Double Mutant F178yR181E OF
E.COLI Transaldolase B
Length = 337
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 172/329 (52%), Gaps = 16/329 (4%)
Query: 57 LSTELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALAD 116
++ +L ++ ++ +V DT + + P AT + SL+L +P+ +R +D A+A
Sbjct: 21 MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAW 78
Query: 117 SSCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLK 176
+ + ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+K
Sbjct: 79 AKQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIK 137
Query: 177 LYSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQI 236
LY++ + +R+L K+ STWQGI A+ LE EGI +LT ++SF +I
Sbjct: 138 LYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISP 197
Query: 237 FVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDL 296
+VG + DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 198 YVGEILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEI 253
Query: 297 FSLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLA 356
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 254 LELAGCDRLTIAPTLLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH---- 305
Query: 357 SAMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 306 -NQDPMAVDKLAEGIRKFAIDQEKLEKMI 333
>pdb|1I2P|A Chain A, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant D17a
pdb|1I2P|B Chain B, Crystal Structure Of Escherichia Coli Transaldolase B
Mutant D17a
Length = 316
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 171/328 (52%), Gaps = 16/328 (4%)
Query: 58 STELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADS 117
+ +L ++ ++ +V T + + P AT + SL+L +P+ +R +D A+A +
Sbjct: 1 TDKLTSLRQYTTVVAATGDIAAMKLYQPQDATTNPSLILNAAQIPE--YRKLIDDAVAWA 58
Query: 118 SCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKL 177
+ ++ ++ +K VN+G ++ K+VPGR+STEVDARL+YDT I K L+KL
Sbjct: 59 KQQSNDRAQ-QIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKL 117
Query: 178 YSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIF 237
Y++ + +R+L K+ STWQGI A+ LE EGI +LT ++SF +I F
Sbjct: 118 YNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPF 177
Query: 238 VGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF 297
VGR+ DW + ++ E A EDP + VS+ Y Y ++G+++ +M A+ RN ++
Sbjct: 178 VGRILDWYKANTDKKEYAPA----EDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEIL 233
Query: 298 SLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKWDQLSLAS 357
L G D + +L+ L ES + + K S+ + + A TE E W
Sbjct: 234 ELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPA---RITESEFL-WQH----- 284
Query: 358 AMGPASVELLAAGLDGYVNQARRVEDLF 385
P +V+ LA G+ + ++E +
Sbjct: 285 NQDPMAVDKLAEGIRKFAIDQEKLEKMI 312
>pdb|3HJZ|A Chain A, The Structure Of An Aldolase From Prochlorococcus Marinus
Length = 334
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 168/333 (50%), Gaps = 40/333 (12%)
Query: 56 GLSTELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALA 115
G + L+ +SS + +V DT D ++F P AT + SL+L PD + +D A+
Sbjct: 1 GXKSILEQLSSXTVVVADTGDLDSIKKFQPRDATTNPSLILAAAKNPD--YVKLIDKAI- 57
Query: 116 DSSCCELEN--SELRL--------SCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTH 165
+SS L N SE+ L S FF G ++ K++ GRVSTEVDARL++DT
Sbjct: 58 ESSENTLPNGFSEIELIKETVDQVSVFF-------GKEILKIISGRVSTEVDARLSFDTE 110
Query: 166 GIIRKVHDLLKLYSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXX 225
++K L+ LY + ER+L KI +TW+GI+A+ +LE EGI+ +LT +++F
Sbjct: 111 ATVKKARKLINLYKNFGIEKERILIKIAATWEGIKAAEILEKEGIKCNLTLLFNFCQAVT 170
Query: 226 XXXXXXSVIQIFVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKL 285
++I FVGR+ DW + +G A EDP + V++ Y Y + G K+++
Sbjct: 171 CANANITLISPFVGRILDWHKAKTGKTSFIGA----EDPGVISVTQIYKYFKEKGFKTEV 226
Query: 286 MAAAVRNKQDLFSLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSP----QSAAMYN 341
A+ RN ++ L G D + K L+ LK EK +R+L ++ Y
Sbjct: 227 XGASFRNLDEIKELAGCDLLTIAPKFLEELKR------EKGVLIRKLDASTKINNSIDYK 280
Query: 342 FTEEELTKWDQLSLASAMGPASVELLAAGLDGY 374
F E++ L+ + E L+ G+ G+
Sbjct: 281 FEEKD------FRLSXLEDQXASEKLSEGITGF 307
>pdb|3M16|A Chain A, Structure Of A Transaldolase From Oleispira Antarctica
Length = 329
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/276 (32%), Positives = 150/276 (54%), Gaps = 9/276 (3%)
Query: 55 AGLSTELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPD--TIFRNAVDM 112
A +L+A+ + + +V DT + ++F P AT + SL+L L + + A+D
Sbjct: 4 AQAKNKLEALKAXTTVVADTGDIEAIKQFKPVDATTNPSLILKAAKLANYQHLIEEAIDW 63
Query: 113 ALADSSCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVH 172
AL +NS+ L +K VN+G ++ +PG +STEVDARL++DT + K
Sbjct: 64 ALQIKG--NDKNSQTTLENVGDKLAVNIGCEVLTSIPGVISTEVDARLSFDTQATVAKAR 121
Query: 173 DLLKLYSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXS 232
L++LY + + +R+L KI STW+GI+A+++LE+EGI +LT ++ F +
Sbjct: 122 KLIRLYQDAGIDSDRILIKIASTWEGIQAAKILEAEGIHCNLTLLFHFAQAQACAEAGTT 181
Query: 233 VIQIFVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRN 292
+I FVGR+ DW + +SG E EDP + V++ YN+ +G K+ + A+ RN
Sbjct: 182 LISPFVGRILDWYKANSGQSE----YSASEDPGVVSVTEIYNFYKSHGFKTIVXGASFRN 237
Query: 293 KQDLFSLLGVDYIIAPLKVLQSLKESAISPDEKYSF 328
++ L G D + ++L L E+ SP E+ F
Sbjct: 238 TGEIEELAGCDRLTISPELLAQL-EADTSPLEQKLF 272
>pdb|2E1D|A Chain A, Crystal Structure Of Mouse Transaldolase
pdb|2E1D|B Chain B, Crystal Structure Of Mouse Transaldolase
Length = 331
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 143/260 (55%), Gaps = 8/260 (3%)
Query: 57 LSTELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALAD 116
+ + LD + F+ +V DT F+ + + P AT + SL+L +P ++ V+ A+A
Sbjct: 8 MESALDQLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMP--AYQELVEEAIAY 65
Query: 117 SSCCELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLK 176
E ++ +K V G ++ K +PGRVSTEVDARL++D ++ + L++
Sbjct: 66 GKKLGGPQEE-QIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIE 124
Query: 177 LYSEIDVPPERLLFKIPSTWQGIEASRLLESE-GIQTHLTFVYSFXXXXXXXXXXXSVIQ 235
LY E V +R+L K+ STW+GI+A + LE + GI ++T ++SF ++I
Sbjct: 125 LYKEAGVGKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLIS 184
Query: 236 IFVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQD 295
FVGR+ DW H + + +G DP + V+K YNY K+G+K+ +M A+ RN +
Sbjct: 185 PFVGRILDW---HVANTDKKSYEPQG-DPGVKSVTKIYNYYKKFGYKTIVMGASFRNTGE 240
Query: 296 LFSLLGVDYIIAPLKVLQSL 315
+ +L G D++ K+L L
Sbjct: 241 IKALAGCDFLTISPKLLGEL 260
>pdb|2CWN|A Chain A, Crystal Structure Of Mouse Transaldolase
pdb|2CWN|B Chain B, Crystal Structure Of Mouse Transaldolase
Length = 332
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 176/341 (51%), Gaps = 28/341 (8%)
Query: 61 LDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADSSCC 120
LD + F+ +V DT F+ + + P AT + SL+L +P ++ V+ A+A
Sbjct: 10 LDQLKQFTTVVADTGDFNAIDEYKPQDATTNPSLILAAAQMP--AYQELVEEAIAYGKKL 67
Query: 121 ELENSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYSE 180
E ++ +K V G ++ K +PGRVSTEVDARL++D ++ + L++LY E
Sbjct: 68 GGPQEE-QIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLIELYKE 126
Query: 181 IDVPPERLLFKIPSTWQGIEASRLLESE-GIQTHLTFVYSFXXXXXXXXXXXSVIQIFVG 239
V +R+L K+ STW+GI+A + LE + GI ++T ++SF ++I FVG
Sbjct: 127 AGVGKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLISPFVG 186
Query: 240 RLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLFSL 299
R+ DW H + + +G DP + V+K YNY K+G+K+ +M A+ RN ++ +L
Sbjct: 187 RILDW---HVANTDKKSYEPQG-DPGVKSVTKIYNYYKKFGYKTIVMGASFRNTGEIKAL 242
Query: 300 LGVDYIIAPLKVLQSL--KESAISPDEKYSFVRRLSPQSAAMYNFTEEELTKW----DQL 353
G D++ K+L L S ++P + + + S + +E+ +W DQ+
Sbjct: 243 AGCDFLTISPKLLGELLKDNSKLAP----ALSVKAAQTSDSEKIHLDEKAFRWLHNEDQM 298
Query: 354 SLASAMGPASVELLAAGLDGYVNQARRVEDLF-EKMWPPPN 393
+VE L+ G+ + A ++E + E+M+ N
Sbjct: 299 ---------AVEKLSDGIRKFAADAIKLERMLTERMFSAEN 330
>pdb|3CQ0|A Chain A, Crystal Structure Of Tal2_yeast
pdb|3CQ0|B Chain B, Crystal Structure Of Tal2_yeast
Length = 339
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 140/252 (55%), Gaps = 9/252 (3%)
Query: 68 SEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADSSCCELENSEL 127
+ +V D+ F+ ++ P +T + SL+L L + +D A+ + E
Sbjct: 24 THVVADSGDFEAISKYEPQDSTTNPSLILAASKLEK--YARFIDAAVEYGRKHGKTDHE- 80
Query: 128 RLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYSEIDVPPER 187
++ +K LV G + K+VPGRVSTEVDARL++D ++K ++KLY + VP ER
Sbjct: 81 KIENAMDKILVEFGTQILKVVPGRVSTEVDARLSFDKKATVKKALHIIKLYKDAGVPKER 140
Query: 188 LLFKIPSTWQGIEASRLLE-SEGIQTHLTFVYSFXXXXXXXXXXXSVIQIFVGRLRDWAR 246
+L KI STW+GI+A+R LE GI ++T ++SF ++I FVGR+ D+ +
Sbjct: 141 VLIKIASTWEGIQAARELEVKHGIHCNMTLLFSFTQAVACAEANVTLISPFVGRIMDFYK 200
Query: 247 NHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYII 306
SG + DP + V K Y+Y ++G+ +++MAA+ RN +L +L G+D +
Sbjct: 201 ALSGKDYTAET-----DPGVLSVKKIYSYYKRHGYATEVMAASFRNLDELKALAGIDNMT 255
Query: 307 APLKVLQSLKES 318
PL +L+ L ES
Sbjct: 256 LPLNLLEQLYES 267
>pdb|1F05|A Chain A, Crystal Structure Of Human Transaldolase
pdb|1F05|B Chain B, Crystal Structure Of Human Transaldolase
Length = 337
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 181/348 (52%), Gaps = 34/348 (9%)
Query: 57 LSTELDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALAD 116
+ + LD + F+ +V DT F + + P AT + SL+L +P ++ V+ A+A
Sbjct: 11 MESALDQLKQFTTVVADTGDFHAIDEYKPQDATTNPSLILAAAQMP--AYQELVEEAIAY 68
Query: 117 SSCCELENS-ELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLL 175
+L S E ++ +K V G ++ K +PGRVSTEVDARL++D ++ + L+
Sbjct: 69 GR--KLGGSQEDQIKNAIDKLFVLFGAEILKKIPGRVSTEVDARLSFDKDAMVARARRLI 126
Query: 176 KLYSEIDVPPERLLFKIPSTWQGIEASRLLESE-GIQTHLTFVYSFXXXXXXXXXXXSVI 234
+LY E + +R+L K+ STW+GI+A + LE + GI ++T ++SF ++I
Sbjct: 127 ELYKEAGISKDRILIKLSSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTLI 186
Query: 235 QIFVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQ 294
FVGR+ DW ++ D + + L EDP + V+K YNY K+ +K+ +M A+ RN
Sbjct: 187 SPFVGRILDWHVANT-DKKSYEPL---EDPGVKSVTKIYNYYKKFSYKTIVMGASFRNTG 242
Query: 295 DLFSLLGVDYIIAPLKVLQSLKESAISPDEKYSFVRRLSPQSAAMYNFT----EEELTKW 350
++ +L G D++ K+L L + + V LS ++A + +E+ +W
Sbjct: 243 EIKALAGCDFLTISPKLLGELLQ------DNAKLVPVLSAKAAQASDLEKIHLDEKSFRW 296
Query: 351 ----DQLSLASAMGPASVELLAAGLDGYVNQARRVEDLF-EKMWPPPN 393
DQ+ +VE L+ G+ + A ++E + E+M+ N
Sbjct: 297 LHNEDQM---------AVEKLSDGIRKFAADAVKLERMLTERMFNAEN 335
>pdb|3TK7|A Chain A, 2.0 Angstrom Resolution Crystal Structure Of Transaldolase
B (Tala) From Francisella Tularensis In Covalent Complex
With Fructose 6- Phosphate
pdb|3TK7|B Chain B, 2.0 Angstrom Resolution Crystal Structure Of Transaldolase
B (Tala) From Francisella Tularensis In Covalent Complex
With Fructose 6- Phosphate
pdb|3TNO|A Chain A, 1.65 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis In
Covalent Complex With Sedoheptulose-7- Phosphate
pdb|3TNO|B Chain B, 1.65 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis In
Covalent Complex With Sedoheptulose-7- Phosphate
pdb|3UPB|A Chain A, 1.5 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis In Covalent Complex With
Arabinose-5-Phosphate
pdb|3UPB|B Chain B, 1.5 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis In Covalent Complex With
Arabinose-5-Phosphate
pdb|4E0C|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis (Phosphate-Free)
pdb|4E0C|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Transaldolase
From Francisella Tularensis (Phosphate-Free)
Length = 345
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 134/261 (51%), Gaps = 14/261 (5%)
Query: 61 LDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADSSCC 120
L+ + + +V DT F+ +++ P AT + SL+L ++ + + N V ++
Sbjct: 30 LEQLKQVTMVVADTGDFELIKKYKPVDATTNPSLILK--AVKEQKYSNLVAETISKVKAN 87
Query: 121 ELE-NSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYS 179
+ NS+ + + LV+ G + ++ G+VS+EVDAR+++++ I ++ Y
Sbjct: 88 NPDLNSDDLVKEIAIEILVSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYE 147
Query: 180 EIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIFVG 239
+P +R+L KI +TW+GI+A++LL+ EGI +LT ++ ++ FVG
Sbjct: 148 SNGIPKDRVLIKIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVG 207
Query: 240 RLRDW---ARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDL 296
R+ DW N P I D D ++ V Y +G K+ +M A+ RN + +
Sbjct: 208 RITDWQMQQNNLKTFPAIAD------DDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQV 261
Query: 297 FSLLGVDYI-IAPLKVLQSLK 316
+L G D + I+P+ +L+ LK
Sbjct: 262 IALAGCDALTISPV-LLEELK 281
>pdb|3IGX|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis.
pdb|3IGX|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of
Transaldolase B (Tala) From Francisella Tularensis
Length = 324
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 133/261 (50%), Gaps = 14/261 (5%)
Query: 61 LDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADSSCC 120
L+ + + +V DT F+ +++ P AT + SL+L ++ + + N V ++
Sbjct: 9 LEQLKQVTXVVADTGDFELIKKYKPVDATTNPSLILK--AVKEQKYSNLVAETISKVKAN 66
Query: 121 ELE-NSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYS 179
+ NS+ + + LV+ G + ++ G+VS+EVDAR+++++ I ++ Y
Sbjct: 67 NPDLNSDDLVKEIAIEILVSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYE 126
Query: 180 EIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIFVG 239
+P +R+L KI +TW+GI+A++LL+ EGI +LT ++ ++ FVG
Sbjct: 127 SNGIPKDRVLIKIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVG 186
Query: 240 RLRDW---ARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDL 296
R+ DW N P I D D ++ V Y +G K+ + A+ RN + +
Sbjct: 187 RITDWQXQQNNLKTFPAIAD------DDGVNSVKAIYKLYKSHGFKTIVXGASFRNVEQV 240
Query: 297 FSLLGVDYI-IAPLKVLQSLK 316
+L G D + I+P+ +L+ LK
Sbjct: 241 IALAGCDALTISPV-LLEELK 260
>pdb|3TE9|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Fructose 6-Phosphate
pdb|3TE9|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Fructose 6-Phosphate
pdb|3TKF|A Chain A, 1.5 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Sedoheptulose 7-Phosphate.
pdb|3TKF|B Chain B, 1.5 Angstrom Resolution Crystal Structure Of K135m Mutant
Of Transaldolase B (Tala) From Francisella Tularensis In
Complex With Sedoheptulose 7-Phosphate
Length = 345
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 133/261 (50%), Gaps = 14/261 (5%)
Query: 61 LDAVSSFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICSLPDTIFRNAVDMALADSSCC 120
L+ + + +V DT F+ +++ P AT + SL+L ++ + + N V ++
Sbjct: 30 LEQLKQVTMVVADTGDFELIKKYKPVDATTNPSLILK--AVKEQKYSNLVAETISKVKAN 87
Query: 121 ELE-NSELRLSCFFNKALVNVGGDLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYS 179
+ NS+ + + LV+ G + ++ G+VS+EVDAR+++++ I ++ Y
Sbjct: 88 NPDLNSDDLVKEIAIEILVSFGIKILDVIEGKVSSEVDARVSFNSATTIDYAKRIIARYE 147
Query: 180 EIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIFVG 239
+P +R+L I +TW+GI+A++LL+ EGI +LT ++ ++ FVG
Sbjct: 148 SNGIPKDRVLIMIAATWEGIKAAKLLQKEGINCNLTLIFDKAQAKACAEAGVYLVSPFVG 207
Query: 240 RLRDW---ARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDL 296
R+ DW N P I D D ++ V Y +G K+ +M A+ RN + +
Sbjct: 208 RITDWQMQQNNLKTFPAIAD------DDGVNSVKAIYKLYKSHGFKTIVMGASFRNVEQV 261
Query: 297 FSLLGVDYI-IAPLKVLQSLK 316
+L G D + I+P+ +L+ LK
Sbjct: 262 IALAGCDALTISPV-LLEELK 281
>pdb|1VPX|A Chain A, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|B Chain B, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|C Chain C, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|D Chain D, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|E Chain E, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|F Chain F, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|G Chain G, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|H Chain H, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|I Chain I, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|J Chain J, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|K Chain K, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|L Chain L, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|M Chain M, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|N Chain N, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|O Chain O, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|P Chain P, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|Q Chain Q, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|R Chain R, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|S Chain S, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
pdb|1VPX|T Chain T, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295)
From Thermotoga Maritima At 2.40 A Resolution
Length = 230
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 90/175 (51%), Gaps = 29/175 (16%)
Query: 143 DLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYSEIDVPPERLLFKIPSTWQGIEAS 202
++ +V G VS EV ++ D G++R+ +L ++ E ++ KIP T GI+A
Sbjct: 57 EICDLVKGPVSAEV---VSLDYEGMVREARELAQI-------SEYVVIKIPMTPDGIKAV 106
Query: 203 RLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIFVGRLRDWARNHSGDPEIDDALKRGE 262
+ L +EGI+T++T V+S + + FVGR+ D + +D ++
Sbjct: 107 KTLSAEGIKTNVTLVFSPAQAILAAKAGATYVSPFVGRMDDLS---------NDGMR--- 154
Query: 263 DPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF--SLLGVDYIIAPLKVLQSL 315
L + + YN YG +++++AA++R+ + +L+GVD + P VL+ L
Sbjct: 155 --MLGEIVEIYN---NYGFETEIIAASIRHPMHVVEAALMGVDIVTMPFAVLEKL 204
>pdb|3R8R|A Chain A, Transaldolase From Bacillus Subtilis
pdb|3R8R|B Chain B, Transaldolase From Bacillus Subtilis
pdb|3R8R|C Chain C, Transaldolase From Bacillus Subtilis
pdb|3R8R|D Chain D, Transaldolase From Bacillus Subtilis
pdb|3R8R|E Chain E, Transaldolase From Bacillus Subtilis
pdb|3R8R|F Chain F, Transaldolase From Bacillus Subtilis
pdb|3R8R|G Chain G, Transaldolase From Bacillus Subtilis
pdb|3R8R|H Chain H, Transaldolase From Bacillus Subtilis
pdb|3R8R|I Chain I, Transaldolase From Bacillus Subtilis
pdb|3R8R|J Chain J, Transaldolase From Bacillus Subtilis
pdb|3R8R|V Chain V, Transaldolase From Bacillus Subtilis
pdb|3R8R|K Chain K, Transaldolase From Bacillus Subtilis
pdb|3R8R|L Chain L, Transaldolase From Bacillus Subtilis
pdb|3R8R|M Chain M, Transaldolase From Bacillus Subtilis
pdb|3R8R|N Chain N, Transaldolase From Bacillus Subtilis
pdb|3R8R|W Chain W, Transaldolase From Bacillus Subtilis
pdb|3R8R|P Chain P, Transaldolase From Bacillus Subtilis
pdb|3R8R|R Chain R, Transaldolase From Bacillus Subtilis
pdb|3R8R|T Chain T, Transaldolase From Bacillus Subtilis
pdb|3R8R|U Chain U, Transaldolase From Bacillus Subtilis
Length = 212
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 143 DLAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYSEIDVPPERLLFKIPSTWQGIEAS 202
++ +V G VS EV ++ +I + +L K+ I V KIP T G++A
Sbjct: 46 EITDVVKGSVSAEV---ISLKAEEMIEEGKELAKIAPNITV-------KIPMTSDGLKAV 95
Query: 203 RLLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIFVGRLRDWARNHSGDPEIDDALKRGE 262
R L GI+T++T +++ + + F+GRL D N
Sbjct: 96 RALTDLGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDIGHN--------------- 140
Query: 263 DPALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF--SLLGVDYIIAPLKVLQSLKESAI 320
L L+S+ +G ++++AA++R+ Q + +L G PLKV+ +L + +
Sbjct: 141 --GLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPL 198
Query: 321 S 321
+
Sbjct: 199 T 199
>pdb|3R5E|A Chain A, Transaldolase From Corynebacterium Glutamicum
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 14/132 (10%)
Query: 150 GRVSTEVDARLAYDTHGIIRKVHDLLKLYSEIDVPPERLLFKIPSTWQGIEASRLLESEG 209
GRVS EVD R++ D + + + L++++D P ++ KIP+T + A +EG
Sbjct: 103 GRVSIEVDPRISADRDATLAQAKE---LWAKVDRP--NVMIKIPATPGSLPAITDALAEG 157
Query: 210 IQTHLTFVYSFXXXXXXXXXXXSVIQIFVGRLRDWARNHS--------GDPEIDDALKR- 260
I ++T ++S I+ D ++ HS D EID L+
Sbjct: 158 ISVNVTLIFSVARYREVIAAFIEGIKQAAANGHDVSKIHSVASFFVSRVDVEIDKRLEAI 217
Query: 261 GEDPALSLVSKA 272
G D AL+L KA
Sbjct: 218 GSDEALALRGKA 229
>pdb|1WX0|A Chain A, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|B Chain B, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|C Chain C, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|D Chain D, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|E Chain E, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|F Chain F, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|G Chain G, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|H Chain H, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|I Chain I, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
pdb|1WX0|J Chain J, Crystal Structure Of Transaldolase From Thermus
Thermophilus Hb8
Length = 223
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 144 LAKMVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYSEIDVPPERLLFKIPSTWQGIEASR 203
+ + V G VS EV A + ++ + L ++ I V K+P+T +G++A +
Sbjct: 55 ICETVGGPVSAEVTA---LEAEAMVAEGRRLAAIHPNIVV-------KLPTTEEGLKACK 104
Query: 204 LLESEGIQTHLTFVYSFXXXXXXXXXXXSVIQIFVGRLRDWARNHSGDPEIDDALKRGED 263
L +EGI+ ++T ++S S + F+GR +DD G +
Sbjct: 105 RLSAEGIKVNMTLIFSANQALLAARAGASYVSPFLGR-------------VDDISWDGGE 151
Query: 264 PALSLVSKAYNYIHKYGHKSKLMAAAVRNKQDLF--SLLGVDYIIAPLKVLQSL 315
L+ + I K++AA++R+ + + +LLG D P V + L
Sbjct: 152 ----LLREIVEMIQVQDLPVKVIAASIRHPRHVTEAALLGADIATMPHAVFKQL 201
>pdb|1L6W|A Chain A, Fructose-6-Phosphate Aldolase
pdb|1L6W|B Chain B, Fructose-6-Phosphate Aldolase
pdb|1L6W|C Chain C, Fructose-6-Phosphate Aldolase
pdb|1L6W|D Chain D, Fructose-6-Phosphate Aldolase
pdb|1L6W|E Chain E, Fructose-6-Phosphate Aldolase
pdb|1L6W|F Chain F, Fructose-6-Phosphate Aldolase
pdb|1L6W|G Chain G, Fructose-6-Phosphate Aldolase
pdb|1L6W|H Chain H, Fructose-6-Phosphate Aldolase
pdb|1L6W|I Chain I, Fructose-6-Phosphate Aldolase
pdb|1L6W|J Chain J, Fructose-6-Phosphate Aldolase
Length = 220
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 23/147 (15%)
Query: 171 VHDLLKLYSEIDVPPERLLFKIPSTWQGIEASRLLESEGIQTHLTFVYSFXXXXXXXXXX 230
V+D LKL S I ++ K+P T +G+ A ++L++EGI T T VY
Sbjct: 69 VNDALKLRSII----ADIVVKVPVTAEGLAAIKMLKAEGIPTLGTAVYGAAQGLLSALAG 124
Query: 231 XSVIQIFVGRLRDWARNHSGDPEIDDALKRGEDPALSLVSKAYNYIHKYGHKSKLMAAAV 290
+ +V R+ A+ SG + V+ + + + ++K++AA+
Sbjct: 125 AEYVAPYVNRID--AQGGSG---------------IQTVTDLHQLLKMHAPQAKVLAASF 167
Query: 291 RN-KQDLFSLL-GVDYIIAPLKVLQSL 315
+ +Q L LL G + I PL V Q +
Sbjct: 168 KTPRQALDCLLAGCESITLPLDVAQQM 194
>pdb|3CLM|A Chain A, Crystal Structure Of Transaldolase (Yp_208650.1) From
Neisseria Gonorrhoeae Fa 1090 At 1.14 A Resolution
Length = 352
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 150 GRVSTEVDARLAYDTHGIIRKVHDLLKLYSEIDVPPERLLFKIPSTWQGIEASRLLESEG 209
G VS EV LA D G + + +L++ I + K+P+T GI+A L S+G
Sbjct: 103 GFVSLEVSPELAKDAQGTVEEAR---RLHAAI--ARKNAXIKVPATDAGIDALETLVSDG 157
Query: 210 IQTHLTFVYS 219
I +LT ++S
Sbjct: 158 ISVNLTLLFS 167
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,450,506
Number of Sequences: 62578
Number of extensions: 374325
Number of successful extensions: 881
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 835
Number of HSP's gapped (non-prelim): 27
length of query: 394
length of database: 14,973,337
effective HSP length: 101
effective length of query: 293
effective length of database: 8,652,959
effective search space: 2535316987
effective search space used: 2535316987
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)