BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016179
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IF99|LPXB_ARATH Probable lipid-A-disaccharide synthase, mitochondrial
OS=Arabidopsis thaliana GN=LPXB PE=2 SV=1
Length = 460
Score = 551 bits (1419), Expect = e-156, Method: Compositional matrix adjust.
Identities = 266/391 (68%), Positives = 322/391 (82%), Gaps = 4/391 (1%)
Query: 4 FALQWQRRNMSASSRSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVS 63
F L + S+ ++SVI+ A DGELRVFIV+GEVSGD+IGSRLMS++KKL+PLP+
Sbjct: 12 FPLSTFTKRYSSFQAAKSVIDKAAIDGELRVFIVSGEVSGDNIGSRLMSSLKKLSPLPIR 71
Query: 64 FSGVGGSMMSEQGMKSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTV 123
F+GVGGS+M ++G+ SLFPMED+AVMG+WELLPH+YKFRV+LKETI+AA+ F+PH VVTV
Sbjct: 72 FNGVGGSLMCKKGLNSLFPMEDLAVMGVWELLPHLYKFRVKLKETIDAAVKFKPHVVVTV 131
Query: 124 DSKGFSFRLLKQLRARYSHERL-NGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCIL 182
DSKGFSFRLLK+LRARY +RL N HFHYVAPSFWAWKGGE+RL L+ FVDH+ CIL
Sbjct: 132 DSKGFSFRLLKELRARYKQQRLENCSVHFHYVAPSFWAWKGGESRLGGLSEFVDHLFCIL 191
Query: 183 PNEEAICRLNGLAATFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATV 242
PNEE +CR +G+ ATFVGHPV+ED E +L + +P ELK+EG S +++S+PS +TV
Sbjct: 192 PNEERVCREHGVEATFVGHPVLEDASEFDLVRRCKPQELKLEGLS---FSEHSIPSDSTV 248
Query: 243 ISLLPGSRLQEVARMLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPS 302
IS+LPGSRLQEV RMLPIF+K ++LLKD FP+L+T+IHVA N V++YI +WPVP+
Sbjct: 249 ISVLPGSRLQEVERMLPIFSKAMKLLKDPFPKLVTLIHVASNNQVDHYIGESFSEWPVPA 308
Query: 303 ILVPGGSSNLKYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIP 362
ILVP GS+ LKYDAF AS+ ALCTSGTVAVELQLA LP +VAYRAHFLTE IRYKAKIP
Sbjct: 309 ILVPSGSTQLKYDAFGASQAALCTSGTVAVELQLAHLPSLVAYRAHFLTELLIRYKAKIP 368
Query: 363 YISLPNILLDSPIIPEALLQACTPDTLTHLL 393
YISLPNILLDSPIIPEAL QAC P L +L
Sbjct: 369 YISLPNILLDSPIIPEALFQACNPSNLASIL 399
>sp|B6IST7|LPXB_RHOCS Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain
ATCC 51521 / SW) GN=lpxB PE=3 SV=1
Length = 401
Score = 275 bits (702), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 220/358 (61%), Gaps = 25/358 (6%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
L +F++AGE SGD +G RLM+A+++ V F+GVGG M+EQG++SLFPMED+A+ G+
Sbjct: 4 LLIFLIAGEPSGDVLGGRLMAALREAMEGHVEFAGVGGPRMAEQGLQSLFPMEDLALFGL 63
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
ELLP + RL +T +A L P AVV++D+ F FR+ ++LR + L
Sbjct: 64 AELLPRLPTLLKRLDQTTKAVLERTPDAVVSIDAPDFCFRVEQRLRRAGARMPL-----I 118
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYVAP+ WAW+ G AR +A F+DH+L +LP E GL TFVGHPVVE +
Sbjct: 119 HYVAPTVWAWRPGRAR--KVAKFLDHLLALLPFEPPYFEAVGLPCTFVGHPVVESGAD-- 174
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
G+ E F+ ++ + ATV+++LPGSR EV ++LP F T+E+L
Sbjct: 175 ------------AGDGERFRRRHGIAPDATVLTVLPGSRRSEVTKLLPDFGATLEILASR 222
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331
+P+L V+ P V + +Q WPVP+I + G + KYDAF+AS AL SGTVA
Sbjct: 223 YPDLQVVVPTVPG--VAETVAEAVQSWPVPAITLLGDAD--KYDAFAASTAALAASGTVA 278
Query: 332 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+EL LAR+P V+AYR H ++ R ++ Y++L NI+LD P++PE L Q CTPD L
Sbjct: 279 LELALARVPAVIAYRIHPVSHALYRRFIRVRYVNLVNIMLDRPLVPELLQQDCTPDRL 336
>sp|Q5FUA3|LPXB_GLUOX Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain
621H) GN=lpxB PE=3 SV=1
Length = 415
Score = 244 bits (623), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 210/359 (58%), Gaps = 30/359 (8%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
++I+AGE SGD IG+RLM A+ P V F+GVGG M G+ SLFPM D+AVMG+ E
Sbjct: 31 IWILAGEASGDVIGARLMQALHAQDPSLV-FAGVGGGRMEALGLHSLFPMSDLAVMGLVE 89
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
++P + + RL E ++ L +P VVT+DS GF+ RLL+++ ER +G HY
Sbjct: 90 VVPRLRQLSQRLLEAVQDIELRKPDLVVTIDSPGFTLRLLQKI------ER-SGIKRVHY 142
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
VAP WAW+ E R+K D +LC+LP E GL FVGHPV++ +
Sbjct: 143 VAPQVWAWR--ENRVKEFPGLWDRLLCLLPFEPDWFAQRGLEGRFVGHPVLQSGVR---- 196
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
+GN++ F+ ++++P+ A V+ L+PGSR E R+LP+F K +++L+ +P
Sbjct: 197 ----------QGNAQRFRLRHNIPAHAPVVILMPGSRRSEAPRLLPVFRKMLDILRVQYP 246
Query: 274 ELITVIHVAPNRHVENYITGLIQKWPV-PSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
++ VI VAP + I LI+KWP+ P I+ + K+DAF+A++ AL SGT +
Sbjct: 247 DICPVIPVAPV--IAPTIRQLIRKWPIQPHIVT---DIHDKHDAFAAAQCALTKSGTSTL 301
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 391
EL + +P V YR + +T R K+P++++ N+L ++PE L + CTP L
Sbjct: 302 ELAMGNVPMAVTYRVNPVTATIARRLIKVPHVAMVNLLAGREVVPELLQENCTPKKLAE 360
>sp|Q0BS63|LPXB_GRABC Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=lpxB PE=3 SV=1
Length = 393
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 204/360 (56%), Gaps = 28/360 (7%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
++IVAGE SGD +G+RL+ A++ + P + F+G+GG M E G +SLFPM ++AVMG+ E
Sbjct: 6 IYIVAGEHSGDVLGARLIHALRAINP-SIRFAGIGGPRMEECGFQSLFPMHELAVMGLIE 64
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
+LP + K R RL++T++ RP V+T+DS GF RLL+ ++ G HY
Sbjct: 65 ILPRVLKLRRRLQQTVQDIETRRPDLVLTIDSPGFCLRLLRAIQP-------FGIKRVHY 117
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
VAP WAW+ E R+K + +LC+LP EE + FVGHPV+E +
Sbjct: 118 VAPQVWAWR--EHRVKRFPGLWERMLCLLPFEEKWFAERNVPGQFVGHPVLESGAD---- 171
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
+G++ F+ ++S+ A VI L+PGSR E R+LP++ +T+ LL + P
Sbjct: 172 ----------QGDAARFRARHSLADNARVIVLMPGSRANEAGRLLPVYGETLRLLMQNIP 221
Query: 274 ELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVE 333
+ VI +A + + + G + WPV I + + K+DAF+A+ AL SGT +E
Sbjct: 222 TITPVIPLASS--TAHTVRGAVSSWPVQPIFITDIAD--KHDAFAAAEAALTKSGTSTLE 277
Query: 334 LQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393
L + +P V YR + +T R ++PY+++ N+L I+PE L + CTP + +L
Sbjct: 278 LAMGGVPMAVTYRVNRITAMMARRLIRVPYVAMVNLLAGREIVPELLQENCTPTKIAAVL 337
>sp|Q2W4D7|LPXB_MAGSA Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=lpxB PE=3 SV=1
Length = 390
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 205/369 (55%), Gaps = 38/369 (10%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
++++AGE SGD +G RLM+A+K+ VSF+G+GG M +G+ SLFPM +++VMG+ E
Sbjct: 3 IYLIAGEPSGDLLGGRLMAALKERLGEGVSFAGIGGESMRAEGLTSLFPMTELSVMGLVE 62
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA-HFH 152
+LP I K R+K+TI RP A+VT+DS GF+ R+ L+AR P H
Sbjct: 63 VLPRIPKILRRVKQTISDIETKRPDALVTIDSWGFNGRIQAGLKAR------GVPVPRIH 116
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
YVAP WAWK G R K LA +D +L +LPNE GL VGHPV+E
Sbjct: 117 YVAPMVWAWKSG--RTKTLARVLDLLLTLLPNEPEWFEKEGLKTLHVGHPVIEGAAS--- 171
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
G+ F+ ++ ++ +LPGSR E A++L F +T+ LL F
Sbjct: 172 -----------RGDGAAFRVRHGFAPDRKLLCVLPGSRHSETAKLLAPFGETIALLARRF 220
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
P+L V+ V + ++ ++ W +PS++V G KYDAF+A AL SGTVA+
Sbjct: 221 PDLAVVVPTVET--VADEVSQAVKSWALPSMVVRGPE---KYDAFAACDAALAASGTVAL 275
Query: 333 ELQLARLPCVVAYR----AHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDT 388
EL +ARLP V+ Y+ + F+ F+ K +++L NIL+D ++PE L C PD
Sbjct: 276 ELAMARLPAVITYKVSPVSAFIATRFLGLSLK--FVTLVNILVDEAVMPELLQDDCRPDK 333
Query: 389 LT----HLL 393
L HLL
Sbjct: 334 LAAAVEHLL 342
>sp|Q5QYW1|LPXB_IDILO Lipid-A-disaccharide synthase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=lpxB PE=3 SV=1
Length = 379
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 185/346 (53%), Gaps = 27/346 (7%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92
++ IVAGE SGD +G+ LM A+ K P +F GVGG +M+E+GM S F M+D+AVMGI
Sbjct: 8 KIAIVAGEHSGDLLGAGLMQAIAKRHP-NATFIGVGGPLMAERGMDSFFAMDDLAVMGIA 66
Query: 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFH 152
E+ + K K + + +P ++ +D+ F+ + +L+ G + H
Sbjct: 67 EVFQQLPKLLKHRKNLVNYLISEQPDVMIGIDAPDFNLTVEARLKK-------AGISTIH 119
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
YV+PS WAW+ E R+K + VDH+LC+LP E+ + L ATFVGHP+ +D
Sbjct: 120 YVSPSVWAWR--EGRIKGIKKAVDHVLCLLPFEKDFYDKHQLPATFVGHPLADD------ 171
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
+ M+ + +N+ + +++LPGSR E+ARM P+F K L + +
Sbjct: 172 --------IPMQWQQTEARNELELEPAVMYLAILPGSRKGEIARMAPVFLKVANKLAERY 223
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
PEL V + + + Q P +I++P G S +A+ L TSGTVA+
Sbjct: 224 PELRFVAPMISEARAAQFRELVDQYSPELNIVLPVGESR---KVMAAANYLLLTSGTVAL 280
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPE 378
E L + P VVAYR H+L+ I+ P+ SLPN+L I+PE
Sbjct: 281 EALLIKRPMVVAYRFHWLSYQIIKRLFHAPFFSLPNLLAGKEIVPE 326
>sp|Q5LSU1|LPXB_RUEPO Lipid-A-disaccharide synthase OS=Ruegeria pomeroyi (strain ATCC
700808 / DSM 15171 / DSS-3) GN=lpxB PE=3 SV=1
Length = 401
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 31/368 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
+RVFI+AGE SGD +G LM+ +++L P V F GVGG M +G+ S FPM ++++MG+
Sbjct: 17 MRVFILAGEPSGDRLGGALMAGLRQLCP-DVQFDGVGGPAMESEGLSSRFPMAELSIMGL 75
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+LP + + R+ ET +A L RP ++T+DS FS R+ + ++ +
Sbjct: 76 VEVLPKYFHLKRRIAETAQAVLAMRPDVMITIDSPDFSLRVARLVKDASDIRTV------ 129
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYVAPS WAW+ G R +A +DH+L +LP E G+ FVGHPVV +
Sbjct: 130 HYVAPSVWAWRPG--RADKMAKVIDHVLALLPFEPPYMERAGMECDFVGHPVVTE----- 182
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
PE + + + + A V+ LPGSR EV R+ P+F +
Sbjct: 183 ----PE----ATGADIAALRTELGL-GAAPVLLALPGSRRGEVERLAPVFGAALRRFLPE 233
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILV------PGGSSNLKYDAFSASRVALC 325
P++ V+ V HV + + + +WP +LV P ++ K AF+A+ +AL
Sbjct: 234 HPDMRVVVPV--VPHVADQVAQQVAEWPGAPVLVDPRGLAPAQAAMRKRAAFAAADLALA 291
Query: 326 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 385
SGTV++EL A P V+AY+ ++LT+ I ++L N++ ++ ++PE L ACT
Sbjct: 292 ASGTVSLELAAAGTPMVIAYKVNWLTQKIAERMVTIDTVTLVNLVSETRVVPECLGPACT 351
Query: 386 PDTLTHLL 393
P+ + L
Sbjct: 352 PENIAARL 359
>sp|Q7NVY1|LPXB_CHRVO Lipid-A-disaccharide synthase OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=lpxB PE=3 SV=1
Length = 386
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 189/371 (50%), Gaps = 40/371 (10%)
Query: 28 KDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIA 87
+ G L+V +VAGE SGD + + LM A++ + F+G+GG M +G S+ P E +A
Sbjct: 4 RKGALKVAMVAGEASGDLLAAHLMDALRAHRS-DIEFAGIGGPRMEARGFHSMVPQEKLA 62
Query: 88 VMGIWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHER 144
V G E+L P + K R RL+E + L RP + VD+ F+ L L+
Sbjct: 63 VRGYSEVLKSLPELLKIRRRLREQL---LEERPDVFIGVDAPDFNLGLEAGLKK------ 113
Query: 145 LNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVV 204
G HYV+PS WAW+ R++ + V+H+LC+ P E + R G+ T+VGHP+
Sbjct: 114 -GGIPTVHYVSPSVWAWR--PERVQKIGRAVNHVLCLFPMEPPLYRQAGVPVTYVGHPLA 170
Query: 205 EDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKT 264
E+ +E + E +++ +P G V +L+PGSR E+ M+PI+ T
Sbjct: 171 --------------SEIPLEPDREAMRDQLGLPQGVPVFTLMPGSRQSELEYMVPIYLDT 216
Query: 265 VELLKDSFPELITVIHVAPNRHVENYITGLIQ----KWPVPSILVPGGSSNLKYDAFSAS 320
LL +PE ++ +A ++ + L + P+ + G + + A AS
Sbjct: 217 ARLLLRQYPEAQFLVPLATRATMDQFEQMLYRFKARDLPIRKLF---GHAQM---AMIAS 270
Query: 321 RVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEAL 380
V L TSGT +E+ L + P V++Y+ LT ++ K K+PY+ LPNIL ++PE L
Sbjct: 271 DVVLVTSGTATLEVALTKRPMVISYKLSALTYRLVKRKIKLPYVGLPNILCGRFVVPELL 330
Query: 381 LQACTPDTLTH 391
+ TP L
Sbjct: 331 QKQATPQKLAE 341
>sp|Q1D393|LPXB_MYXXD Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK
1622) GN=lpxB PE=3 SV=1
Length = 383
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 187/359 (52%), Gaps = 29/359 (8%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92
R+ +VAGE SGD+ + L++A++ P ++F G+GG+ ++ QG++ LF +++VMGI
Sbjct: 6 RILVVAGEASGDTHAAELVAALRARRP-DLTFFGMGGARLAAQGVELLFDAREVSVMGIT 64
Query: 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFH 152
E+LP I + LK EAA +P + VD F+ RL K+L+A L P +
Sbjct: 65 EVLPRIPRILQILKGLAEAAAERKPDVAILVDIPDFNLRLAKKLKA------LGVPVAY- 117
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
YV+P WAW+ G R++ + VD +LCILP EE R G++A +VG PVVE
Sbjct: 118 YVSPMIWAWRRG--RVRTIKRLVDRMLCILPFEEDFYREAGVSARYVGSPVVEQV----- 170
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
P P + F+ + + A ++LLPGSR+ E+ R+LP + + L
Sbjct: 171 ---PSP------DTATAFRERLGLSKDAPTLALLPGSRMGEIRRLLPDMVEAAKRLSAER 221
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
P L V+ +AP E IT + V ILV G + + AS A+ SGT +
Sbjct: 222 PGLQVVVPLAPTIDREE-ITSRFEGSGVTPILVEGRAP----EVVGASDAAVVASGTAVL 276
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 391
E L + P VV YR +T W R K+ ++SL N+L ++PE L TP+ +
Sbjct: 277 EAGLMQRPLVVVYRVSLITYWVGRLMLKVAFVSLINLLAGRRVVPELLQGEMTPERIAE 335
>sp|Q1QMM4|LPXB_NITHX Lipid-A-disaccharide synthase OS=Nitrobacter hamburgensis (strain
X14 / DSM 10229) GN=lpxB PE=3 SV=1
Length = 396
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 192/373 (51%), Gaps = 32/373 (8%)
Query: 24 EGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPM 83
+G + R+F++A E SGD +GS LM +++ V F GVGG M+ +G+ SLFP+
Sbjct: 3 DGTAANSSRRIFLIATEESGDRLGSSLMKVLRRRLDDAVRFEGVGGRSMAREGLVSLFPI 62
Query: 84 EDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHE 143
ED+++MG ++ + R++ET +A + P +V +DS F+ R+ +++RA
Sbjct: 63 EDLSIMGFAAVVKQLPMILRRIRETADAVIAAEPDMLVIIDSPDFTHRVARRVRA----- 117
Query: 144 RLNGPAH--FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAATFVG 200
PA YV+PS WAW+ G AR + +VDH+L +LP E E RL G T+VG
Sbjct: 118 --RRPALPIVDYVSPSVWAWRPGRAR--AMRRYVDHVLALLPFEPEEYRRLAGPPCTYVG 173
Query: 201 HPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPI 260
HP++E L P+ E + + P A ++ LPGSR E+ + +
Sbjct: 174 HPLIEQVGMLR----PDAQE----------RQRRDAPPPALLV--LPGSRRSEIDHHMAV 217
Query: 261 FAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSAS 320
F +T+ L+ E+ V+ P H+ + + WP+ +V G K AF +
Sbjct: 218 FGETLRTLQLDAGEMDVVLLTMP--HLIEKVKAAVASWPLQPRIVVGEQG--KQAAFRVA 273
Query: 321 RVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEAL 380
R AL SGTV +EL LA +P V AYR + W + + + L N+++ +IPE L
Sbjct: 274 RAALTKSGTVTLELALAGVPMVTAYRGGAVEAWIAQRVIRTSSVILANLVIGENVIPEFL 333
Query: 381 LQACTPDTLTHLL 393
+ CTP+ L L
Sbjct: 334 QENCTPENLAPAL 346
>sp|A9AIM7|LPXB_BURM1 Lipid-A-disaccharide synthase OS=Burkholderia multivorans (strain
ATCC 17616 / 249) GN=lpxB PE=3 SV=1
Length = 389
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 188/362 (51%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ +++ P P + G+GG+ M QG S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLRERLPAPTHYYGIGGARMIAQGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPDAFIGVDAPDFNFNVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLAD-- 172
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
E+ +E ++ + +P+ VI++LPGSR E+A + P F + L
Sbjct: 173 ------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P L V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGLRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|Q886N0|LPXB_PSESM Lipid-A-disaccharide synthase OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=lpxB PE=3 SV=1
Length = 380
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 184/364 (50%), Gaps = 31/364 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LR+ +VAGE SGD +GS LM A+K P V F GVGG +M +GM+S FPME ++VMG+
Sbjct: 5 LRIALVAGEASGDILGSGLMRALKARHP-DVRFIGVGGPLMEAEGMQSYFPMERLSVMGL 63
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+L + + R K ++ + +P + +D+ F+ + QLR G
Sbjct: 64 VEVLGRLRELLARRKLLVQTLIDEKPDVFIGIDAPDFTLNIELQLRR-------AGIKTV 116
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ D + L
Sbjct: 117 HYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEKGVPVRFVGHPLA-DTIPLE 173
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
+G EL G S D V++L+PGSR EV R+ +F E L
Sbjct: 174 SDRGATRAEL---GLSVD----------GPVVALMPGSRGGEVGRLGALFFDAAERLLVE 220
Query: 272 FPELITVIHVA-PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P L V+ A P R + + L+Q +P L+ G S + A +A L SGT
Sbjct: 221 RPGLRFVLPCASPQRRAQ--VEQLLQGRDLPITLLDGRS----HVALAACDAVLIASGTA 274
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L TP+ L
Sbjct: 275 TLEALLYKRPMVVAYRMAPLTFWVLKRLVKSPYVSLPNLLAQRLLVPELLQDDATPEALA 334
Query: 391 HLLM 394
L+
Sbjct: 335 RTLL 338
>sp|Q47F79|LPXB_DECAR Lipid-A-disaccharide synthase OS=Dechloromonas aromatica (strain
RCB) GN=lpxB PE=3 SV=1
Length = 382
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 187/369 (50%), Gaps = 37/369 (10%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
+R+ +VAGE SGD + S L++A+K P V F G+GG M QG S +PME ++VMG
Sbjct: 5 VRIAMVAGEASGDLLASHLIAALKTHLPDAV-FYGIGGPKMQAQGFDSWWPMEKLSVMGY 63
Query: 92 WELLPH---IYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGP 148
W+ L H I R +LK+ + L +P + VD+ F+ L L+A G
Sbjct: 64 WDALKHYREIAGIRRQLKKRL---LDLKPDIFIGVDAPDFNLGLETNLKA-------AGV 113
Query: 149 AHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCL 208
HYV+PS WAW+GG R+K +A V+ +L + P E A+ + T+VGHP+ D +
Sbjct: 114 RTIHYVSPSIWAWRGG--RVKKIAKAVNRVLALFPMEPALYEKERVPVTYVGHPLA-DII 170
Query: 209 ELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELL 268
L K + + K S+P + ++LPGSR E+A M F +T +++
Sbjct: 171 PLQTSK-------------QAVREKLSLPRDYPIFAMLPGSRQGELAMMAETFVETAKII 217
Query: 269 KDS-FPELITVIHVAPNRHVENYITGLI--QKWPVPSILVPGGSSNLKYDAFSASRVALC 325
++ P + V+ +A + + Q VP L+ G + DA A+ V+L
Sbjct: 218 RERHLPNAMFVVPLATRETRLQFELAIYNRQAGDVPFRLLFGHAQ----DALGAADVSLV 273
Query: 326 TSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACT 385
SGT +E L + P V+ Y+ + W ++ A +PY+ LPN+L ++PE L T
Sbjct: 274 ASGTATLEAALIKRPMVITYKIAKFSYWLMKRMAYLPYVGLPNVLAGRFVVPEILQDEAT 333
Query: 386 PDTLTHLLM 394
P+ L L+
Sbjct: 334 PENLAEALV 342
>sp|Q1I639|LPXB_PSEE4 Lipid-A-disaccharide synthase OS=Pseudomonas entomophila (strain
L48) GN=lpxB PE=3 SV=1
Length = 375
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 181/363 (49%), Gaps = 30/363 (8%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+L V +VAGE SGD +GS LM A+K P V F GVGG +M +GM S FPME +AVMG
Sbjct: 3 QLCVALVAGEASGDILGSGLMRAIKARHP-DVRFIGVGGPLMEAEGMSSYFPMERLAVMG 61
Query: 91 IWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
+ E+L + + R KE I + +P + +D+ F+ + +LR G
Sbjct: 62 LVEVLGRLRELLKRRKELIATLIDEKPDVFIGIDAPDFTLNIELKLRQ-------AGIKT 114
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ D + L
Sbjct: 115 VHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPLA-DTIPL 171
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
+G EL + + VI+L+PGSR EV R+ +F + L++
Sbjct: 172 ESDRGAARAELGL--------------AEGPVIALMPGSRGGEVGRLGALFLDAAQRLRE 217
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A N + +++ +P L+ G S + A +A L SGT
Sbjct: 218 LVPGVRFVLPCA-NAARRAQVEQMLEGRDLPLTLLDGRS----HQALAACDAVLIASGTA 272
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L A T + L
Sbjct: 273 TLEAMLYKRPMVVAYRLAPLTYWILKRMVKSPYVSLPNLLAQRMLVPELLQDAATSEALA 332
Query: 391 HLL 393
L
Sbjct: 333 QTL 335
>sp|Q4ZWR5|LPXB_PSEU2 Lipid-A-disaccharide synthase OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=lpxB PE=3 SV=1
Length = 380
Score = 179 bits (454), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 181/362 (50%), Gaps = 31/362 (8%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
+ +VAGE SGD +GS LM A+K P + F GVGG +M +GM+S FPME ++VMG+ E
Sbjct: 7 IALVAGEASGDILGSGLMRALKVRHP-DIRFIGVGGPLMEAEGMQSSFPMERLSVMGLVE 65
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
+L + + R K ++ + +P + +D+ F+ + QLR G HY
Sbjct: 66 VLGRLRELLARRKLLVQTLINEKPDVFIGIDAPDFTLNIELQLRR-------AGIKTVHY 118
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
V+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ +
Sbjct: 119 VSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPLAD-------- 168
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
+ +E + + + V++L+PGSR EV R+ +F T E L P
Sbjct: 169 ------TIPLESDRAGARAGLGLAQETPVVALMPGSRGGEVGRLGGLFFDTAERLLARCP 222
Query: 274 ELITVIHVA-PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
EL V+ A P R + + L+Q +P L+ G S + A +A L SGT +
Sbjct: 223 ELRFVLPCASPQRRAQ--VEQLLQGRDLPVTLLDGQS----HVALAACDAVLIASGTATL 276
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHL 392
E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L TP+ L
Sbjct: 277 EALLYKRPMVVAYRLAPLTFWILKRMVKSPYVSLPNLLAQRLLVPELLQDDATPEALART 336
Query: 393 LM 394
L+
Sbjct: 337 LL 338
>sp|Q3SRI5|LPXB_NITWN Lipid-A-disaccharide synthase OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=lpxB PE=3 SV=1
Length = 396
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 28/362 (7%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92
++F++A E SGD +GS LM A+++ V F GVGG M+ +G+ SLFP+E++++MG
Sbjct: 12 KIFLIATEESGDRLGSSLMKALRRRLGCSVRFEGVGGQTMAREGLVSLFPIEELSIMGFT 71
Query: 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFH 152
++ + R++ T +A + P +V +DS F+ AR R G
Sbjct: 72 AVVKQLPMIVRRIRGTADAVIAAAPDVLVIIDSPDFT-----HRVARRVRARCRGLPIVD 126
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAATFVGHPVVEDCLELN 211
YV+PS WAW+ G AR + ++VDH+L +LP E EA RL G T+VGHP++E L
Sbjct: 127 YVSPSVWAWRSGRAR--AMRSYVDHVLALLPFEPEAYRRLGGPPCTYVGHPLLEQIGVLR 184
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
D + + + + +LPGSR E+ L +F +T+ +L+ S
Sbjct: 185 ----------------PDAQERQRRDADPPTLLVLPGSRRSEIRHHLSVFGETIGMLQQS 228
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331
PE+ V+ P H+ + IT + WP +V G + K AF +R AL SGTV
Sbjct: 229 IPEIEVVLPTTP--HLVDEITPAVATWPRRPRVVIG--EDDKRAAFRVARAALAKSGTVT 284
Query: 332 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTH 391
+EL LA +P V AY+A + W R ++ + L N+++ +IPE L + C P L
Sbjct: 285 LELALAGVPMVAAYKAGSVEAWIARRVIRVSSVILANLVIRENVIPEFLQEDCVPGKLAP 344
Query: 392 LL 393
L
Sbjct: 345 AL 346
>sp|B4ECL8|LPXB_BURCJ Lipid-A-disaccharide synthase OS=Burkholderia cepacia (strain J2315
/ LMG 16656) GN=lpxB PE=3 SV=1
Length = 389
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ +++ P + G+GG M QG S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLRERLPESAQYYGIGGQRMIAQGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPDAFIGVDAPDFNFSVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +D
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLADD- 173
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
+ +E ++ + +P+ VI++LPGSR E+A + P F + L
Sbjct: 174 -------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|A0K8D0|LPXB_BURCH Lipid-A-disaccharide synthase OS=Burkholderia cenocepacia (strain
HI2424) GN=lpxB PE=3 SV=1
Length = 389
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ +++ P + G+GG M QG S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLRERLPESAQYYGIGGQRMIAQGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPAAFIGVDAPDFNFNVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +D
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLADD- 173
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
+ +E ++ + +P+ VI++LPGSR E+A + P F + L
Sbjct: 174 -------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|Q1BHG9|LPXB_BURCA Lipid-A-disaccharide synthase OS=Burkholderia cenocepacia (strain
AU 1054) GN=lpxB PE=3 SV=1
Length = 389
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ +++ P + G+GG M QG S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLRERLPESAQYYGIGGQRMIAQGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPAAFIGVDAPDFNFNVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +D
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLADD- 173
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
+ +E ++ + +P+ VI++LPGSR E+A + P F + L
Sbjct: 174 -------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|B1JUD7|LPXB_BURCC Lipid-A-disaccharide synthase OS=Burkholderia cenocepacia (strain
MC0-3) GN=lpxB PE=3 SV=1
Length = 389
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 186/362 (51%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ +++ P + G+GG M QG S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLRERLPESAQYYGIGGQRMIAQGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPAAFIGVDAPDFNFNVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +D
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLADD- 173
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
+ +E ++ + +P+ VI++LPGSR E+A + P F + L
Sbjct: 174 -------------IPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|Q1R020|LPXB_CHRSD Lipid-A-disaccharide synthase OS=Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=lpxB
PE=3 SV=1
Length = 386
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 190/368 (51%), Gaps = 37/368 (10%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
+R+++VAGE+SGD +G+ LM A+K+ P F G+GG M +GM+SL+P+E ++VMG+
Sbjct: 1 MRIYLVAGELSGDILGAGLMQALKRRHP-DAEFRGIGGPRMLAEGMQSLYPLETLSVMGL 59
Query: 92 WELLPHI---YKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGP 148
E+L H+ K R L+ AL ++P ++ +D+ F+ L +QLRA G
Sbjct: 60 VEVLKHLPGLIKVRRHLRRD---ALAWQPDVMIGIDAPDFNLGLERQLRA-------TGM 109
Query: 149 AHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCL 208
HYV+PS WAW+ G R+K +A VD +L LP E A + + FVGHP+ +
Sbjct: 110 RTVHYVSPSVWAWRQG--RVKTIARSVDAMLTFLPFEAAFYARHQVPVAFVGHPLAD--- 164
Query: 209 ELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELL 268
EL + + + + + S A ++++LPGSR E+ + P F + L
Sbjct: 165 -----------ELPLVNDRQAARTALGLSSTAPLLAVLPGSRGNEIRFLGPTFLDSAVWL 213
Query: 269 KDSFPELITVIHVA-PNRHVENYITGLIQKWPVPSIL-VPGGSSNLKYDAFSASRVALCT 326
++ P L VI A P R E + L+ P + + G S A +A+ L
Sbjct: 214 RERVPGLQVVIPAASPARRQELEV--LLATHPAREFVHLRDGESR---QAMTAADAVLLA 268
Query: 327 SGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTP 386
SGT A+E L P VVAY+ T W + K +ISLPN++ ++PE + + +
Sbjct: 269 SGTAALEAMLCHRPMVVAYKMAAATHWLAKRMVKTEWISLPNLIAQETLVPELVQEDASC 328
Query: 387 DTLTHLLM 394
+ + L+
Sbjct: 329 EAIGEALL 336
>sp|Q13XC9|LPXB_BURXL Lipid-A-disaccharide synthase OS=Burkholderia xenovorans (strain
LB400) GN=lpxB PE=3 SV=1
Length = 389
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 184/365 (50%), Gaps = 29/365 (7%)
Query: 26 AIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMED 85
A++ LRV +VAGE SGD + + L+ + P + G+GG M G + FPME
Sbjct: 2 ALQPSPLRVAMVAGEPSGDLLAASLLDGLASRLPAGTQYYGIGGPRMIATGFDAHFPMEK 61
Query: 86 IAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAV-VTVDSKGFSFRLLKQLRARYSHER 144
+ V G E L HI + + ++ ++ LL P +V V VD+ F+F L LR
Sbjct: 62 LTVRGYVEALKHIPEI-LGIRTELKRQLLAEPPSVFVGVDAPDFNFGLEHPLRD------ 114
Query: 145 LNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVV 204
G H+V PS WAW+GG R+K +A VDH+LC+ P E A+ G+AA++VGHP+
Sbjct: 115 -AGIPTVHFVCPSIWAWRGG--RIKKIAKAVDHMLCVFPFETALLEKAGVAASYVGHPLA 171
Query: 205 EDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKT 264
+ E+ + ++ + + +I++LPGSR E+ + P F
Sbjct: 172 D--------------EIPLVPDTLGARRALGLAEEGPIIAVLPGSRRSEIDLIGPTFFAA 217
Query: 265 VELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVAL 324
+E+++ P L V+ A + + L+ P ++ + G S L A +A+ L
Sbjct: 218 IEMMQHQEPALRFVMPAA-TPALREMLRPLVDSHPGLALTITDGQSQL---AMTAADAIL 273
Query: 325 CTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQAC 384
SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 274 VKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPEILQHFA 333
Query: 385 TPDTL 389
TP L
Sbjct: 334 TPQAL 338
>sp|Q2IL69|LPXB_ANADE Lipid-A-disaccharide synthase OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=lpxB PE=3 SV=1
Length = 383
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 182/358 (50%), Gaps = 29/358 (8%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92
++ IVAGE S D +R + +++L P +F GVGG + E G+++L P EDI+VMG+
Sbjct: 10 QILIVAGEASADLHAARTLHELQRLRPGLTAF-GVGGPRLREAGLEALAPAEDISVMGLA 68
Query: 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFH 152
E+LP I + L+ AA RP A + VD F+ RL +L+ +L P +
Sbjct: 69 EVLPRIPRILGILRMLGRAAAERRPKAALLVDLPDFNLRLAARLK------KLGIPV-VY 121
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
YV+P+ WAW+ G A K +A VD +LCILP EE G++A FVGHP E
Sbjct: 122 YVSPTIWAWRQGRA--KQIARVVDRMLCILPFEERFYEGTGVSARFVGHPFAER------ 173
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
P P G E +++ +P+ T I+++PGSR E+ R+LP + E L+ +
Sbjct: 174 ---PPP------GTPESYRSALGLPAARTTIAMVPGSRPSELKRLLPPMLEAAERLRAAH 224
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
P+ V+ VAP L + LV G + + AS AL SGT +
Sbjct: 225 PDAQFVVPVAPTLDRAALEPYLAAHRTLEVRLVDGRTEEV----VGASDAALVKSGTSTL 280
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
E L P VV Y+ +L+ R KI +++L NIL I+PE L + +P+ +
Sbjct: 281 EAGLMLRPMVVVYKLSWLSYAVARMLVKIAHVALVNILAGRGIVPELLQRDASPERMA 338
>sp|B2T5I1|LPXB_BURPP Lipid-A-disaccharide synthase OS=Burkholderia phytofirmans (strain
DSM 17436 / PsJN) GN=lpxB PE=3 SV=1
Length = 389
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 184/365 (50%), Gaps = 29/365 (7%)
Query: 26 AIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMED 85
A++ LRV +VAGE SGD + + L+ + P + G+GG M G + FPME
Sbjct: 2 ALQPSPLRVAMVAGEPSGDLLAASLLDGLTSRLPAGTQYYGIGGPRMIATGFDAHFPMEK 61
Query: 86 IAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAV-VTVDSKGFSFRLLKQLRARYSHER 144
++V G E L HI + ++ ++ LL P +V V VD+ F+F L LR
Sbjct: 62 LSVRGYVEALKHIPGI-LGIRNELKRQLLAEPPSVFVGVDAPDFNFGLEHPLRE------ 114
Query: 145 LNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVV 204
G H+V PS WAW+GG R+K +A VDH+LC+ P E A+ G+AA++VGHP+
Sbjct: 115 -AGIPTVHFVCPSIWAWRGG--RIKKIAKAVDHMLCVFPFETALLEKAGVAASYVGHPLA 171
Query: 205 EDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKT 264
+ E+ + ++ + + +I++LPGSR E+ + P F
Sbjct: 172 D--------------EIPLVPDTLGARRALGLAQDGPIIAVLPGSRRSEIDLIGPTFFAA 217
Query: 265 VELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVAL 324
+E+++ P L V+ A + + L+ P ++ + G + L A +A+ L
Sbjct: 218 MEMMQHQEPNLRFVMPAA-TPALREMLRPLVDSHPGLALTITDGQAQL---AMTAADAIL 273
Query: 325 CTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQAC 384
SGTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L
Sbjct: 274 VKSGTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPEILQHFA 333
Query: 385 TPDTL 389
TP L
Sbjct: 334 TPQAL 338
>sp|C3K6G9|LPXB_PSEFS Lipid-A-disaccharide synthase OS=Pseudomonas fluorescens (strain
SBW25) GN=lpxB PE=3 SV=1
Length = 379
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 184/364 (50%), Gaps = 32/364 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LR+ +VAGE SGD +G+ LM A+K P V F GVGG +M +G+ S FPME ++VMG+
Sbjct: 4 LRIALVAGEASGDILGAGLMRALKAQHP-AVQFIGVGGPLMQAEGLTSYFPMERLSVMGL 62
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E+L + + R K I+ + +P + +D+ F+ L +LR G
Sbjct: 63 VEVLGRLRELLARRKLLIQTLIEEKPDVFIGIDAPDFTLTLELKLRQ-------AGIKTV 115
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
HYV+PS WAW+ + R+ + D +L +LP E G+ FVGH + +
Sbjct: 116 HYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEKGVPVRFVGHTLAD------ 167
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
+ ++ + + + +P G +++L+PGSR EV R+ +F E L+
Sbjct: 168 --------TIPLQADRTAARAELGLPDG-PLVALMPGSRGGEVGRLASVFFDAAERLQAL 218
Query: 272 FPELITVIHVA-PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A P R V+ I L++ +P L+ G S + A +A L SGT
Sbjct: 219 KPGVRFVLPCASPQRRVQ--IETLLEGRNLPLTLLDGQS----HLALAACDAVLIASGTA 272
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P VVAYR LT W ++ K PYISLPN+L ++PE L TP+ L
Sbjct: 273 TLEALLYKRPMVVAYRLAPLTFWILKRMVKSPYISLPNLLAQRLLVPELLQDDATPEALA 332
Query: 391 HLLM 394
L+
Sbjct: 333 QTLL 336
>sp|Q1H152|LPXB_METFK Lipid-A-disaccharide synthase OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=lpxB PE=3 SV=1
Length = 378
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 185/362 (51%), Gaps = 32/362 (8%)
Query: 36 IVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWELL 95
IVAGE SGD +GS L+ A+KK P + F G+ G M +G ++LFPME ++V G E+L
Sbjct: 6 IVAGEASGDLLGSHLIRALKKQRP-DLKFVGIAGPKMIAEGAETLFPMERLSVRGYVEVL 64
Query: 96 PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHYVA 155
H+ KE + L RP + +D+ F+F L ++L+ + G HYV+
Sbjct: 65 RHLPGLLKIRKEVAQYFLDHRPDVFIGIDAPDFNFTLERKLKHQ-------GIPTVHYVS 117
Query: 156 PSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLGKG 215
PS WAW+ G ++K + V H+L + P E I R G+A ++VGHP+ D L
Sbjct: 118 PSIWAWRRG--KIKKIQQAVSHMLALFPFEPEIYRQAGVAVSYVGHPLA-DML------- 167
Query: 216 PEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFPE- 274
P E MEG E+ K +P + V+++LPGSR EV ++ ++ KT +L+ P+
Sbjct: 168 --PMEPDMEGAREELK----LPQDSLVVAMLPGSRQSEVQQLADLYIKTAKLILSERPDA 221
Query: 275 --LITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
L+ +I R + + + +P ++ G + + A A+ + SGT +
Sbjct: 222 RFLVPLI-TRETRAIFERALYANEGYDLPVSIMFGHA----HQAMEAANAVIVASGTATL 276
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHL 392
E L + P ++ YR L+ ++ +PY+ LPN+L I+PE L PD L
Sbjct: 277 EAALIKRPMIITYRMPNLSWQILKRMKYLPYVGLPNVLAGRFIVPELLQHDAVPDKLAAT 336
Query: 393 LM 394
L+
Sbjct: 337 LL 338
>sp|Q48F72|LPXB_PSE14 Lipid-A-disaccharide synthase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=lpxB PE=3 SV=1
Length = 380
Score = 174 bits (442), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 180/362 (49%), Gaps = 31/362 (8%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
+ +VAGE SGD +GS LM A+K P + F GVGG +M +GM+S FPME ++VMG+ E
Sbjct: 7 IALVAGEASGDILGSGLMRALKVRHP-DIRFIGVGGPLMEAEGMQSYFPMERLSVMGLVE 65
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
+L + + R K ++ + +P + +D+ F+ + QLR G HY
Sbjct: 66 VLGRLRELLARRKLLVQTLINEKPDVFIGIDAPDFTLNIELQLRR-------AGIKTVHY 118
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
V+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ +
Sbjct: 119 VSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEKGVPVRFVGHPLAD-------- 168
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
+ +E + + A V++L+PGSR EV R+ +F ELL P
Sbjct: 169 ------TIPLESYRAAARAGLGLAQEAPVVALMPGSRGGEVGRLGGLFFDAAELLLAQRP 222
Query: 274 ELITVIHVA-PNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
L V+ A P R + + L+Q +P L+ G S + A +A L SGT +
Sbjct: 223 GLRFVLPCASPQRRAQ--VEQLLQGRNLPVTLLDGQS----HVALAACDAVLIASGTATL 276
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHL 392
E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L TP+ L
Sbjct: 277 EALLYKRPMVVAYRLAPLTFWILKRMVKSPYVSLPNLLAQRLLVPELLQDDATPEALART 336
Query: 393 LM 394
L+
Sbjct: 337 LL 338
>sp|Q6N5R2|LPXB_RHOPA Lipid-A-disaccharide synthase OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=lpxB PE=3 SV=1
Length = 393
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 189/373 (50%), Gaps = 36/373 (9%)
Query: 23 IEGAIKDGEL--RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSL 80
+ GA K G+ V+++A E SGD +G+ LM ++ V F+GVGG M+ +G+ SL
Sbjct: 1 MSGAAKTGDRVRTVYLIATEESGDRLGAALMRELRARLGSKVRFAGVGGHCMAGEGLASL 60
Query: 81 FPMEDIAVMG---IWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLR 137
FP+E+++++G + + LP I K ++ ++A L +P +V +DS F+ R+ +++R
Sbjct: 61 FPIEELSIIGFAAVVQRLPMILKL---IRRAVDAVLTAKPDILVIIDSPDFTHRVARRVR 117
Query: 138 ARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEA-ICRLNGLAA 196
R + YV+P+ WAW+ G AR + +VDH+L +LP E A RL G
Sbjct: 118 QRDPSIPI-----VDYVSPTVWAWRPGRAR--AMLGYVDHVLALLPFEPAEYRRLQGPPC 170
Query: 197 TFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVAR 256
++VGHP+ E L P+ +E + + S P V+ +LPGSR EV
Sbjct: 171 SYVGHPLTEQFGSLR----PD--------AAEQARREASPP----VLLVLPGSRRSEVRH 214
Query: 257 MLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316
F T+ LK V+ P H+E + + W V +V G K A
Sbjct: 215 HAAAFGDTLARLKHEGVAFEAVLPTTP--HLEGLVRAAVASWEVQPRIVVGEQD--KRAA 270
Query: 317 FSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPII 376
F + AL SGTV +EL +A +P V AYRA + W R + + L N+++ +I
Sbjct: 271 FRIAHAALAKSGTVTLELAIAGVPMVTAYRAGSVEIWIARRVVRPGTVILANLVMGDDVI 330
Query: 377 PEALLQACTPDTL 389
PE + + C PD L
Sbjct: 331 PEFIQEDCVPDKL 343
>sp|A4JF62|LPXB_BURVG Lipid-A-disaccharide synthase OS=Burkholderia vietnamiensis (strain
G4 / LMG 22486) GN=lpxB PE=3 SV=1
Length = 389
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 185/362 (51%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ ++ P + G+GG M G S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLQARLPASTHYYGIGGQRMLAHGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPDAFIGVDAPDFNFNVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLAD-- 172
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
E+ +E ++ + +P+ VI++LPGSR E+A + P F + L
Sbjct: 173 ------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
+++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQEREPGVRFVMPAA-TPALRELLQPLVAAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|B1YS61|LPXB_BURA4 Lipid-A-disaccharide synthase OS=Burkholderia ambifaria (strain
MC40-6) GN=lpxB PE=3 SV=1
Length = 389
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 184/362 (50%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ +++ P + G+GG M G S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLQERLPASTRYYGIGGQRMLAHGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPDAFIGVDAPDFNFSVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLAD-- 172
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
E+ +E ++ + +P+ VI++LPGSR E+ + P F + L
Sbjct: 173 ------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIGLIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|Q0BE28|LPXB_BURCM Lipid-A-disaccharide synthase OS=Burkholderia ambifaria (strain
ATCC BAA-244 / AMMD) GN=lpxB PE=3 SV=1
Length = 389
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 184/362 (50%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD + + L+ +++ P + G+GG M G S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLAASLLGGLQERLPASTRYYGIGGQRMLAHGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPDAFIGVDAPDFNFSVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLAD-- 172
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
E+ +E ++ + +P+ VI++LPGSR E+ + P F + L
Sbjct: 173 ------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIGLIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGVRFVMPAA-TPALRELLQPLVDAHPQLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|B1JBP7|LPXB_PSEPW Lipid-A-disaccharide synthase OS=Pseudomonas putida (strain W619)
GN=lpxB PE=3 SV=1
Length = 375
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 181/364 (49%), Gaps = 30/364 (8%)
Query: 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVM 89
+L V +VAGE SGD +GS LM A+K P V F GVGG +M +GM+S FPME +AVM
Sbjct: 2 AQLCVALVAGEASGDILGSGLMRALKARHP-QVRFIGVGGPLMEAEGMQSYFPMERLAVM 60
Query: 90 GIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA 149
G+ E+L + + R K I+ + +P + +D+ F+ + +LR G
Sbjct: 61 GLVEVLGRLRELLKRRKALIQTLIAEKPDVFIGIDAPDFTLNIELKLRQ-------AGIK 113
Query: 150 HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLE 209
HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ +
Sbjct: 114 TVHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPLADT--- 168
Query: 210 LNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK 269
+ + + + + + +G V++L+PGSR EV R+ +F + L
Sbjct: 169 -----------IPLAADRQAARMALGLDAG-PVVALMPGSRGGEVGRLGALFLDAAQRLV 216
Query: 270 DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 329
+ P + V+ A N + +++ +P L+ G S + A +A L SGT
Sbjct: 217 ELIPGVHFVLPCA-NGARRAQLEQMLEGRELPLTLLDGQS----HQALAACDAVLIASGT 271
Query: 330 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L A T + L
Sbjct: 272 ATLEAMLYKRPMVVAYRLAPLTYWILKRLVKSPYVSLPNLLAQRELVPELLQDAATSEAL 331
Query: 390 THLL 393
L
Sbjct: 332 AQTL 335
>sp|Q8XZH8|LPXB_RALSO Lipid-A-disaccharide synthase OS=Ralstonia solanacearum (strain
GMI1000) GN=lpxB PE=3 SV=1
Length = 390
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/358 (32%), Positives = 182/358 (50%), Gaps = 27/358 (7%)
Query: 33 RVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIW 92
R+ + AGE SGD + S L+ + P V++ G+GG+ M+EQG S +PM ++V G
Sbjct: 11 RIGMAAGEASGDLLASLLLKGLHARLPRDVAYEGIGGARMAEQGFASHWPMHKLSVNGYV 70
Query: 93 ELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFH 152
E+L + + +E + L P A + VD+ F+F + +R R P H
Sbjct: 71 EVLGQLREILAIRRELKQNLLADPPMAFIGVDAPDFNFNVEIAMR------RAGVPV-VH 123
Query: 153 YVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNL 212
+V+PS WAW+ G R+K +A VDHILC+ P E I G+ AT+VGHP+ +
Sbjct: 124 FVSPSIWAWRAG--RIKTIARAVDHILCLFPFEPEIYARAGIPATYVGHPLAD------- 174
Query: 213 GKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSF 272
E+ +E + E +++ +P G V+++LPGSR EV + P + ++
Sbjct: 175 -------EIPLEPDVEGARSRLGLPLGRKVVAVLPGSRNSEVKLLGPTLFAAMARMQAVE 227
Query: 273 PELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAV 332
P+L V+ A N + I + + P + V G S + A A+ V L SGT +
Sbjct: 228 PDLAFVLPAA-NAMLRERIDAMRAEHPGLHLWVVDGQS---HAAMEAADVILLASGTATL 283
Query: 333 ELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
E L + P V+ Y+ +LT ++ K +PY+ LPNIL ++PE L TP+ L
Sbjct: 284 EAALYKKPMVITYKVPWLTAQIMKRKGYLPYVGLPNILSGRFVVPELLQDDATPEALA 341
>sp|A3NWL7|LPXB_BURP0 Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
1106a) GN=lpxB PE=3 SV=1
Length = 388
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 186/360 (51%), Gaps = 29/360 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ LL P A V +D+ F+F L + LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLLAEPPDAFVGIDAPDFNFGLEQALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ +E ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDALA 339
>sp|A1V555|LPXB_BURMS Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain SAVP1)
GN=lpxB PE=3 SV=1
Length = 388
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 186/360 (51%), Gaps = 29/360 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ LL P A V +D+ F+F L + LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLLAEPPDAFVGIDAPDFNFGLEQALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ +E ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDALA 339
>sp|Q62JD7|LPXB_BURMA Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain ATCC
23344) GN=lpxB PE=3 SV=1
Length = 388
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 186/360 (51%), Gaps = 29/360 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ LL P A V +D+ F+F L + LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLLAEPPDAFVGIDAPDFNFGLEQALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ +E ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDALA 339
>sp|Q63T25|LPXB_BURPS Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
K96243) GN=lpxB PE=3 SV=1
Length = 388
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 186/359 (51%), Gaps = 29/359 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ LL P A V +D+ F+F L + LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLLAEPPDAFVGIDAPDFNFGLEQALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ +E ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLEPDTHGARIALGLPDGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPVLRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDAL 338
>sp|Q3JR42|LPXB_BURP1 Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
1710b) GN=lpxB PE=3 SV=1
Length = 388
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 185/359 (51%), Gaps = 29/359 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ LL P A V +D+ F+F L LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLLAEPPDAFVGIDAPDFNFGLEPALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ +E ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDAL 338
>sp|Q2IW93|LPXB_RHOP2 Lipid-A-disaccharide synthase OS=Rhodopseudomonas palustris (strain
HaA2) GN=lpxB PE=3 SV=1
Length = 393
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 199/373 (53%), Gaps = 32/373 (8%)
Query: 18 RSRSVIEGAIKDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGM 77
R+ + GA++ R+F++A E SGD +G+ LM A+K V F GVGG M+EQG+
Sbjct: 2 RAANATTGAVR----RLFLIATEESGDRLGAALMQALKTRLGDGVVFEGVGGRAMAEQGL 57
Query: 78 KSLFPMEDIAVMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLR 137
SLFP+E++++MGI ++ + R++ T +A L +P ++ +DS F+ R+ +++R
Sbjct: 58 VSLFPIEELSIMGISAVVRRLPSILRRIRSTADAVLGAKPDMLIIIDSPDFTHRVARRVR 117
Query: 138 ARYSHERLNGPAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAA 196
R A +YV+P+ WAW+ G AR + +VDH+L +LP E E RL G
Sbjct: 118 VRDP-----SIAIVNYVSPTVWAWRPGRAR--AMRRYVDHVLALLPFEPEEYRRLRGPPC 170
Query: 197 TFVGHPVVEDCLELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVAR 256
T+VGHP+ E L P P E + ++E V+ +LPGSR E+
Sbjct: 171 TYVGHPLTEQIAHLR----PSPAE-QARRDAE-----------PPVLVVLPGSRRSEIHH 214
Query: 257 MLPIFAKTVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDA 316
++ +F +T+ L+ +L ++ P H+ + + ++ WPV +V G + K A
Sbjct: 215 LMAVFGETLGRLQAEQGDLELILPTVP--HLRDAVEAGVRDWPVQPRIVVGDAD--KKAA 270
Query: 317 FSASRVALCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPII 376
F +R A SGTV +EL LA +P V Y+A + W + + + L N+++ +I
Sbjct: 271 FRIARAAFAKSGTVTLELALAHVPMVAVYKAGAMEAWIGKRVIRSASVILANLVVGENVI 330
Query: 377 PEALLQACTPDTL 389
PE + + C PD L
Sbjct: 331 PEFIQEDCVPDRL 343
>sp|A2SB86|LPXB_BURM9 Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain NCTC
10229) GN=lpxB PE=3 SV=1
Length = 388
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 185/360 (51%), Gaps = 29/360 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ L P A V +D+ F+F L + LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLFAEPPDAFVGIDAPDFNFGLEQALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ +E ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDALA 339
>sp|A3MKS9|LPXB_BURM7 Lipid-A-disaccharide synthase OS=Burkholderia mallei (strain NCTC
10247) GN=lpxB PE=3 SV=1
Length = 388
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 185/360 (51%), Gaps = 29/360 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ L P A V +D+ F+F L + LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLFAEPPDAFVGIDAPDFNFGLEQALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ +E ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLEPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLT 390
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDALA 339
>sp|B2JIB3|LPXB_BURP8 Lipid-A-disaccharide synthase OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=lpxB PE=3 SV=1
Length = 389
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 176/358 (49%), Gaps = 27/358 (7%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LR+ +VAGE SGD + + ++ + P + G+GG M +G + F ME ++V G
Sbjct: 8 LRLAMVAGEPSGDLLAASMLDGLAARLPDTTQYFGIGGPRMIAKGFDAHFAMEKLSVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHF 151
E L H+ + E L P A + VD+ F+F L LR G
Sbjct: 68 VEALKHVPEILGIRNELKRQLLAEPPSAFIGVDAPDFNFGLEHPLRD-------AGIPTI 120
Query: 152 HYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELN 211
H+V PS WAW+GG R+K + VDH+LC+ P E+A+ +G+ AT+VGHP+ +
Sbjct: 121 HFVCPSIWAWRGG--RIKKIVKAVDHMLCVFPFEKALLEKSGVTATYVGHPLAD------ 172
Query: 212 LGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDS 271
E+ +E ++ + + +P VI++LPGSR E+A + P F +EL+
Sbjct: 173 --------EIPLEPDTAGARLELGLPESGPVIAVLPGSRRSEIALIGPTFFDAMELMLQR 224
Query: 272 FPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVA 331
P + V+ A E + +P L G + A +A+ L SGTV
Sbjct: 225 EPGVRFVMPAATPALRELLKPLVDAHANLPLTLTDGNAQR----AMTAADAILVKSGTVT 280
Query: 332 VELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+ L
Sbjct: 281 LEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPEILQHFATPEAL 338
>sp|Q88MG7|LPXB_PSEPK Lipid-A-disaccharide synthase OS=Pseudomonas putida (strain KT2440)
GN=lpxB PE=3 SV=1
Length = 375
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 179/364 (49%), Gaps = 30/364 (8%)
Query: 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVM 89
+L V +VAGE SGD +GS LM A+K P V F GVGG +M +G++S FPME +AVM
Sbjct: 2 AQLCVALVAGEASGDILGSGLMRALKARHP-DVRFIGVGGPLMEAEGLQSYFPMERLAVM 60
Query: 90 GIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA 149
G+ E+L + + R K I+ + +P + +D+ F+ + +LR G
Sbjct: 61 GLVEVLGRLRELLKRRKLLIQTLIEEKPDVFIGIDAPDFTLNIELKLRQ-------AGIK 113
Query: 150 HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLE 209
HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ +
Sbjct: 114 TVHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPLADT--- 168
Query: 210 LNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK 269
+ +E + + + G V++L+PGSR EV R+ +F E L
Sbjct: 169 -----------IPLEADRPAARAALGLGEG-PVVALMPGSRGGEVGRLGALFLDAAERLS 216
Query: 270 DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 329
P + V+ A N I +++ +P L+ G S + A +A L SGT
Sbjct: 217 QQVPGVRFVLPCA-NATRRAQIEQMLEGRQLPLTLLDGQS----HQALAACDAVLIASGT 271
Query: 330 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L T + L
Sbjct: 272 ATLEALLYKRPMVVAYRLAPLTFWILKRLVKSPYVSLPNLLAQRELVPELLQDDATSEAL 331
Query: 390 THLL 393
+ L
Sbjct: 332 ANTL 335
>sp|Q89KQ7|LPXB_BRAJA Lipid-A-disaccharide synthase OS=Bradyrhizobium japonicum (strain
USDA 110) GN=lpxB PE=3 SV=1
Length = 392
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 190/366 (51%), Gaps = 34/366 (9%)
Query: 28 KDGELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIA 87
+D + ++F++A E SGD +GS LM +++ V F GVGG M+ +G+++LFP+E+++
Sbjct: 5 RDPKRKIFLIATEESGDRLGSALMKVLRQRLGDGVQFEGVGGRTMAREGLETLFPIEELS 64
Query: 88 VMGIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
++G ++ + K ++ET +A L P A+V +DS F+ R
Sbjct: 65 IVGFAAVVQQLPKILRLIRETADAVLEAVPDALVIIDSPDFTH-------RVARRVRARN 117
Query: 148 PA--HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNE-EAICRLNGLAATFVGHPVV 204
PA YV+P WAW+ G AR + +VDH+L +LP E E +L G ++VGHP++
Sbjct: 118 PAIPIVDYVSPQLWAWRPGRAR--TMLGYVDHVLGLLPFEPEEYRKLGGPPCSYVGHPLI 175
Query: 205 EDCLELNLGKGPEPCELKMEGNSEDFKNKYS-VPSGATVISLLPGSRLQEVARMLPIFAK 263
E LG + N+E+ K + S +P V+ +LPGSR E+ + +F
Sbjct: 176 E-----QLG--------SLRPNAEEQKRRNSELP----VLLVLPGSRRSEIRHHIEVFGA 218
Query: 264 TVELLKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVA 323
+ L+ ++ P H+E + I WPV +V G + K AF + A
Sbjct: 219 ALGRLQAEGRAFELMLPTMP--HLEATVREGIASWPVKPQIVIGEAE--KRAAFRIAHAA 274
Query: 324 LCTSGTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQA 383
L SGTV +EL L+ +P V AYR + + +R ++ + L N+++ +IPE L +
Sbjct: 275 LAKSGTVTLELALSGIPMVTAYRVGAIEAFILRRAIRVSSVILANLVIGEDVIPEFLQED 334
Query: 384 CTPDTL 389
CTP+ L
Sbjct: 335 CTPEKL 340
>sp|B8F5I8|LPXB_HAEPS Lipid-A-disaccharide synthase OS=Haemophilus parasuis serovar 5
(strain SH0165) GN=lpxB PE=3 SV=1
Length = 387
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 183/360 (50%), Gaps = 27/360 (7%)
Query: 34 VFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGIWE 93
+ IVAGE+SGD +G+ L+ A+K P F GV G M ++G ++LF ME +AVMG+ E
Sbjct: 8 IAIVAGEISGDILGAGLIKALKVHYP-NARFIGVAGEKMLKEGCETLFDMEKLAVMGLAE 66
Query: 94 LLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPAHFHY 153
++ H+ + R K+ I+ L +P + +D+ F+ + ++L+A+ G HY
Sbjct: 67 VVRHLPRLLKRRKQVIDTMLALKPDIFIGIDAPDFNLGVEEKLKAQ-------GIKTIHY 119
Query: 154 VAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLELNLG 213
V+PS WAW+ + R+ +A+ D +L LP E+A + F+GH + D + L
Sbjct: 120 VSPSVWAWR--QNRVHKIASATDLVLAFLPFEKAFYDRFNVPCRFIGH-TMADAIALQPN 176
Query: 214 KGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKDSFP 273
+ E C L ++ + +++L GSR EV + F KT +LLK +P
Sbjct: 177 RQ-EACRLLQLDENQHY------------VAILVGSRGSEVNFLSEPFLKTAQLLKAQYP 223
Query: 274 ELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTVAVE 333
++ ++ + + E + Q P ++ G++ A + L SGT A+E
Sbjct: 224 DVQFLVPLVNEKRREQFEAIKAQVAPELEVITLAGNAR---AAMMVAEATLLASGTAALE 280
Query: 334 LQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTLTHLL 393
L + P VV Y+ LT W + K YISLPN+L + P++PE + C+P+ L L
Sbjct: 281 AMLCKSPMVVGYKMKPLTYWLAKRLVKTDYISLPNLLANEPLVPELIQADCSPENLAKHL 340
>sp|Q39F56|LPXB_BURS3 Lipid-A-disaccharide synthase OS=Burkholderia sp. (strain 383)
GN=lpxB PE=3 SV=1
Length = 389
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 187/362 (51%), Gaps = 33/362 (9%)
Query: 31 ELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMG 90
+LR+ +VAGE SGD +G+ L+ +++ P + G+GG M QG S + M+ + V G
Sbjct: 7 QLRLAMVAGEPSGDLLGASLLGGLRERLPESAQYYGIGGQRMIAQGFDSHWQMDKLTVRG 66
Query: 91 IWELL---PHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNG 147
E L P I + R LK + L RP A + VD+ F+F + + R G
Sbjct: 67 YVEALGQIPEILRIRGELKRQL---LAERPDAFIGVDAPDFNFNVEQAARD-------AG 116
Query: 148 PAHFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDC 207
H+V PS WAW+GG R+K +A VDH+LC+ P E AI G+A+T+VGHP+ +
Sbjct: 117 IPSIHFVCPSIWAWRGG--RIKKIAKSVDHMLCLFPFEPAILDKAGVASTYVGHPLAD-- 172
Query: 208 LELNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVEL 267
E+ +E ++ + +P+ VI++LPGSR E+A + P F + L
Sbjct: 173 ------------EIPLEPDTHGARIALGLPADGPVIAVLPGSRRSEIALIGPTFFAAMAL 220
Query: 268 LKDSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTS 327
++ P + V+ A + + L+ P ++ + G S + A +A+ L S
Sbjct: 221 MQQREPGVRFVMPAA-TPALRALLQPLVDAHPKLALTITDGRSQV---AMTAADAILVKS 276
Query: 328 GTVAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPD 387
GTV +E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TP+
Sbjct: 277 GTVTLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPE 336
Query: 388 TL 389
L
Sbjct: 337 AL 338
>sp|A3NAT4|LPXB_BURP6 Lipid-A-disaccharide synthase OS=Burkholderia pseudomallei (strain
668) GN=lpxB PE=3 SV=1
Length = 388
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 185/359 (51%), Gaps = 29/359 (8%)
Query: 32 LRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVMGI 91
LRV +VAGE SGD +G+ L+ + P + G+GG MS + +PME +AV G
Sbjct: 8 LRVALVAGEPSGDLLGASLLGGLHARLPASSRYYGIGGPRMSAVEFDAHWPMEKLAVRGY 67
Query: 92 WELLPHIYKFRVRLKETIEAALLFRP-HAVVTVDSKGFSFRLLKQLRARYSHERLNGPAH 150
E L HI + +R++ ++ LL P A V +D+ F+F L + LR G
Sbjct: 68 VEALKHIPEI-LRIRGELKRQLLAEPPDAFVGIDAPDFNFGLEQALRG-------AGIPT 119
Query: 151 FHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLEL 210
H+V PS WAW+GG R+K + VDH+LC+ P E + G+AATFVGHP+ +
Sbjct: 120 IHFVCPSIWAWRGG--RIKKIVKAVDHMLCLFPFEPELLEKAGVAATFVGHPLAD----- 172
Query: 211 NLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLKD 270
E+ + ++ + +P G VI++LPGSR E+ + P F +EL++
Sbjct: 173 ---------EIPLAPDTHGARIALGLPGGGPVIAVLPGSRRSEIELIGPTFFDAMELMQQ 223
Query: 271 SFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGTV 330
P + V+ A + + L+ P S+ + G + + A +A+ L SGTV
Sbjct: 224 REPGVRFVVPAA-TPALRALLQPLVDAHPSLSVTLTEGRAQV---AMTAADAILVKSGTV 279
Query: 331 AVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P V++Y+ +LT +R + +PY+ LPNIL ++PE L TPD L
Sbjct: 280 TLEAALLKKPMVISYKVPWLTGQIMRRQGYLPYVGLPNILAGRFVVPELLQHFATPDAL 338
>sp|A5W837|LPXB_PSEP1 Lipid-A-disaccharide synthase OS=Pseudomonas putida (strain F1 /
ATCC 700007) GN=lpxB PE=3 SV=1
Length = 375
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 179/364 (49%), Gaps = 30/364 (8%)
Query: 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVM 89
+L V +VAGE SGD +GS LM A+K P V F GVGG +M +G++S FPME +AVM
Sbjct: 2 AQLCVALVAGEASGDILGSGLMRALKARHP-DVRFIGVGGPLMEAEGLQSYFPMERLAVM 60
Query: 90 GIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA 149
G+ E+L + + R K I+ + +P + +D+ F+ + +LR G
Sbjct: 61 GLVEVLGRLRELLKRRKLLIQTLIEEKPDVFIGIDAPDFTLNIELKLRQ-------AGIK 113
Query: 150 HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLE 209
HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ +
Sbjct: 114 TVHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPLADT--- 168
Query: 210 LNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK 269
+ +E + + + G V++L+PGSR EV R+ +F E L
Sbjct: 169 -----------IPLEADRPAARAALGLGEG-PVVALMPGSRGGEVGRLGALFLDAAERLC 216
Query: 270 DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 329
P + V+ A N I +++ +P L+ G S + A +A L SGT
Sbjct: 217 QQVPGVRFVLPCA-NATRRAQIEQMLEGRQLPLTLLDGQS----HQALAACDAVLIASGT 271
Query: 330 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L T + L
Sbjct: 272 ATLEALLYKRPMVVAYRLAPLTFWILKRLVKSPYVSLPNLLAQRELVPELLQDDATSEAL 331
Query: 390 THLL 393
+ L
Sbjct: 332 ANTL 335
>sp|A6V1E5|LPXB_PSEA7 Lipid-A-disaccharide synthase OS=Pseudomonas aeruginosa (strain
PA7) GN=lpxB PE=3 SV=1
Length = 378
Score = 168 bits (425), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 178/364 (48%), Gaps = 28/364 (7%)
Query: 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVM 89
G LRV +VAGE SGD +GS LM A++ P + F GVGG M +G+ S FPME ++VM
Sbjct: 3 GRLRVALVAGEASGDILGSGLMQALRARHP-EIEFIGVGGPRMEAEGLSSYFPMERLSVM 61
Query: 90 GIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA 149
G+ E+L + + R K I + RP ++ +D+ F+ + +LR G
Sbjct: 62 GLVEVLGRLPELLRRRKRLIRTLIDARPDVMIGIDAPDFTLGVEHRLRQ-------AGLR 114
Query: 150 HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLE 209
HYV+PS WAW+ + R+ + D +L + P E +G+ FVGHP+
Sbjct: 115 TVHYVSPSVWAWR--QKRVLKIREACDLMLALFPFEARFYEEHGVPVRFVGHPLANT--- 169
Query: 210 LNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK 269
+ ++ + + + +P V++L+PGSR EV ++ +F T + L
Sbjct: 170 -----------IPLQADRVAARERLGLPLDGQVVALMPGSRGGEVGKLGELFLDTAQRLL 218
Query: 270 DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 329
P L V+ A E L + P+P L+ G S ++A +A L SGT
Sbjct: 219 GERPGLRFVLPCASAARREQIERMLQGREPLPLTLLDGAS----HEALAACDAVLIASGT 274
Query: 330 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P VVAYR LT ++ K PYISLPN+L ++PE + A TP L
Sbjct: 275 ATLEALLYKRPMVVAYRVAGLTYRILKRLVKSPYISLPNLLAGRLLVPELIQDAATPRAL 334
Query: 390 THLL 393
L
Sbjct: 335 ATTL 338
>sp|B0KSB2|LPXB_PSEPG Lipid-A-disaccharide synthase OS=Pseudomonas putida (strain GB-1)
GN=lpxB PE=3 SV=1
Length = 375
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 178/364 (48%), Gaps = 30/364 (8%)
Query: 30 GELRVFIVAGEVSGDSIGSRLMSAMKKLAPLPVSFSGVGGSMMSEQGMKSLFPMEDIAVM 89
+L V +VAGE SGD +GS LM A+K P V F GVGG +M +G++S FPME +AVM
Sbjct: 2 AQLCVALVAGEASGDILGSGLMRALKARHP-DVRFIGVGGPLMEAEGLQSYFPMERLAVM 60
Query: 90 GIWELLPHIYKFRVRLKETIEAALLFRPHAVVTVDSKGFSFRLLKQLRARYSHERLNGPA 149
G+ E+L + + R K I+ + +P + +D+ F+ + +LR G
Sbjct: 61 GLVEVLGRLRELLKRRKLLIQTLIDEKPDVFIGIDAPDFTLNIELKLRQ-------AGIK 113
Query: 150 HFHYVAPSFWAWKGGEARLKNLAAFVDHILCILPNEEAICRLNGLAATFVGHPVVEDCLE 209
HYV+PS WAW+ + R+ + D +L +LP E G+ FVGHP+ +
Sbjct: 114 TVHYVSPSVWAWR--QKRVLKIREGCDLMLTLLPFEARFYEEQGVPVRFVGHPLADT--- 168
Query: 210 LNLGKGPEPCELKMEGNSEDFKNKYSVPSGATVISLLPGSRLQEVARMLPIFAKTVELLK 269
+ +E + + + G +++L+PGSR EV R+ +F E L
Sbjct: 169 -----------IPLEADRSVARAALGLGEG-PIVALMPGSRGGEVGRLGALFLDAAEHLC 216
Query: 270 DSFPELITVIHVAPNRHVENYITGLIQKWPVPSILVPGGSSNLKYDAFSASRVALCTSGT 329
P + V+ A N + +++ +P L+ G S + A +A L SGT
Sbjct: 217 QQVPGVRFVLPCA-NAARRAQVEHMLEGRQLPLTLLDGQS----HQALAACDAVLIASGT 271
Query: 330 VAVELQLARLPCVVAYRAHFLTEWFIRYKAKIPYISLPNILLDSPIIPEALLQACTPDTL 389
+E L + P VVAYR LT W ++ K PY+SLPN+L ++PE L T L
Sbjct: 272 ATLEALLYKRPMVVAYRLAPLTYWILKRLVKSPYVSLPNLLAQRELVPELLQDQATSQAL 331
Query: 390 THLL 393
+ L
Sbjct: 332 ANTL 335
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,560,550
Number of Sequences: 539616
Number of extensions: 6116583
Number of successful extensions: 14346
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 12824
Number of HSP's gapped (non-prelim): 265
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)