Query 016180
Match_columns 394
No_of_seqs 205 out of 1856
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 09:15:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016180.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016180hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 4.7E-57 1.6E-61 439.3 29.5 276 81-390 48-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 1.8E-56 6.1E-61 436.3 21.3 276 82-390 54-383 (383)
3 1tzs_A Cathepsin E; hydrolase, 100.0 2.2E-54 7.7E-59 418.2 27.9 278 85-393 19-345 (351)
4 3vla_A EDGP; extracellular, in 100.0 9.5E-55 3.3E-59 428.4 25.4 291 85-390 16-399 (413)
5 3cms_A Chymosin B; hydrolase, 100.0 6E-55 2E-59 417.6 22.7 274 83-390 8-323 (323)
6 2apr_A Rhizopuspepsin; hydrola 100.0 4.1E-54 1.4E-58 412.1 27.6 278 80-390 6-324 (325)
7 4aa9_A Chymosin; hydrolase, as 100.0 1.4E-54 4.8E-59 414.6 23.1 276 82-390 4-320 (320)
8 3c9x_A Trichoderma reesei aspa 100.0 3.9E-54 1.3E-58 412.9 25.4 281 84-389 10-329 (329)
9 1oew_A Endothiapepsin; hydrola 100.0 5.2E-54 1.8E-58 412.0 25.7 280 84-389 10-329 (329)
10 1htr_B Gastricsin; aspartyl pr 100.0 4.7E-54 1.6E-58 412.4 25.2 274 84-390 7-329 (329)
11 1am5_A Pepsin, acid proteinase 100.0 5.5E-54 1.9E-58 411.1 25.2 273 85-390 8-324 (324)
12 1dpj_A Proteinase A; proteinas 100.0 5E-54 1.7E-58 412.3 24.7 275 85-390 9-329 (329)
13 1mpp_A Pepsin; hydrolase(acid 100.0 1.2E-53 4.1E-58 414.8 26.6 278 85-393 14-358 (361)
14 2bju_A Plasmepsin II; aspartic 100.0 4E-54 1.4E-58 426.6 22.9 270 85-390 134-450 (453)
15 1j71_A Candidapepsin, aspartic 100.0 2.5E-53 8.4E-58 408.3 25.7 278 80-393 3-327 (334)
16 1miq_A Plasmepsin; aspartic pr 100.0 2.4E-53 8.2E-58 413.9 25.7 269 85-390 58-374 (375)
17 1qdm_A Prophytepsin; aspartic 100.0 4.2E-53 1.4E-57 423.3 26.8 280 82-390 44-478 (478)
18 3k1w_A Renin; protease, altern 100.0 1.6E-53 5.6E-58 410.7 21.2 276 82-390 11-340 (341)
19 3qvc_A Histo-aspartic protease 100.0 5.1E-53 1.7E-57 419.2 24.8 276 81-390 129-449 (451)
20 2qzx_A Candidapepsin-5; aspart 100.0 1.2E-52 4E-57 404.9 25.8 277 81-393 4-334 (342)
21 3fv3_A SAPP1P-secreted asparti 100.0 2.9E-52 9.8E-57 401.7 28.2 276 80-393 3-332 (339)
22 3aup_A SBG7S, BG, basic 7S glo 100.0 1.9E-52 6.6E-57 411.8 27.0 294 85-393 17-396 (403)
23 3pvk_A Candidapepsin-2; hydrol 100.0 2.5E-52 8.6E-57 402.6 26.2 278 81-393 4-334 (342)
24 1yg9_A Aspartic protease BLA G 100.0 2E-52 6.9E-57 401.1 24.2 272 84-390 12-329 (330)
25 1ibq_A Aspergillopepsin; aspar 100.0 3.9E-52 1.3E-56 398.3 26.1 277 85-390 10-325 (325)
26 1izd_A Aspartic proteinase; su 100.0 3.1E-52 1.1E-56 398.6 23.8 276 85-390 11-323 (323)
27 1bxo_A Protein (penicillopepsi 100.0 5.5E-52 1.9E-56 397.0 21.2 275 85-390 11-323 (323)
28 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-49 4.7E-54 397.3 26.0 273 87-393 72-423 (455)
29 2ewy_A Beta-secretase 2; BACE2 100.0 3.3E-49 1.1E-53 386.5 28.2 274 86-393 10-358 (383)
30 2qp8_A Beta-secretase 1; BACE1 100.0 8.4E-49 2.9E-53 385.1 28.0 272 87-393 19-370 (395)
31 3vf3_A Beta-secretase 1; struc 100.0 7.1E-49 2.4E-53 386.5 25.6 274 87-393 26-377 (402)
32 1wkr_A Polyporopepsin; hydrola 100.0 8.9E-49 3.1E-53 377.5 25.3 266 82-393 5-336 (340)
33 1t6e_X Xylanase inhibitor; two 100.0 9.7E-48 3.3E-52 375.6 22.0 281 85-390 10-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 1.4E-38 4.7E-43 291.2 14.3 196 83-307 7-219 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 5.4E-33 1.9E-37 254.5 17.9 189 197-390 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 3.3E-24 1.1E-28 167.0 7.9 86 85-191 9-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 4.5E-18 1.5E-22 129.9 8.6 78 310-390 3-87 (87)
38 2i1a_A DNA damage-inducible pr 92.5 0.11 3.6E-06 42.5 4.1 31 87-119 23-53 (148)
39 1fmb_A EIAV protease; hydrolas 84.5 0.94 3.2E-05 34.5 3.9 26 91-118 9-34 (104)
40 2hs1_A HIV-1 protease; ultra-h 83.7 1.1 3.7E-05 33.9 3.9 27 92-120 10-36 (99)
41 3ec0_A Protease; HIV-2, inhibi 79.3 1.8 6.3E-05 32.5 3.8 27 92-120 10-36 (99)
42 3liy_A Protease; hydrolase, hy 76.8 2.2 7.7E-05 32.8 3.6 32 92-123 12-46 (116)
43 2hah_A Protease, retropepsin; 75.4 2.6 8.7E-05 32.8 3.7 27 91-120 15-41 (116)
44 3s8i_A Protein DDI1 homolog 1; 71.4 3.4 0.00012 33.6 3.7 31 88-120 22-52 (148)
45 3sqf_A Protease; folded monome 68.3 5.2 0.00018 30.8 3.9 29 92-122 11-39 (114)
46 3slz_A GAG-Pro-POL polyprotein 56.8 10 0.00034 30.1 3.8 28 90-119 22-49 (132)
47 3ka2_A [L-Ala51;Gly51']HIV-1 p 53.3 11 0.00038 32.2 3.8 27 91-119 9-35 (203)
48 2rsp_A RSV protease; hydrolase 51.0 13 0.00043 29.2 3.4 24 97-122 27-50 (124)
49 3c9x_A Trichoderma reesei aspa 41.7 23 0.00079 32.4 4.4 39 82-120 186-230 (329)
50 1bxo_A Protein (penicillopepsi 40.1 24 0.00081 32.2 4.1 40 82-121 182-225 (323)
51 1oew_A Endothiapepsin; hydrola 37.4 27 0.00094 31.9 4.1 40 82-121 185-230 (329)
52 2apr_A Rhizopuspepsin; hydrola 36.4 29 0.001 31.6 4.1 39 82-120 186-229 (325)
53 1ibq_A Aspergillopepsin; aspar 36.4 33 0.0011 31.3 4.5 39 82-120 181-225 (325)
54 1b5f_A Protein (cardosin A); h 33.5 39 0.0013 29.3 4.3 32 89-120 188-227 (239)
55 3ka2_A [L-Ala51;Gly51']HIV-1 p 31.9 39 0.0013 28.8 3.8 27 91-119 113-139 (203)
56 2i1a_A DNA damage-inducible pr 31.0 16 0.00053 29.2 1.1 28 360-387 107-134 (148)
57 1izd_A Aspartic proteinase; su 30.6 37 0.0013 30.9 3.8 34 87-120 187-225 (323)
58 3s8i_A Protein DDI1 homolog 1; 27.0 29 0.001 27.9 2.1 35 355-389 101-135 (148)
59 1lya_B Cathepsin D; lysosomal 26.8 52 0.0018 28.3 3.9 32 89-120 99-137 (241)
60 3aup_A SBG7S, BG, basic 7S glo 21.0 60 0.0021 30.5 3.4 15 106-120 262-276 (403)
61 1yg9_A Aspartic protease BLA G 20.8 45 0.0015 30.4 2.3 34 88-121 192-231 (330)
62 1mpp_A Pepsin; hydrolase(acid 20.5 88 0.003 28.7 4.3 32 90-121 210-249 (361)
63 1qdm_A Prophytepsin; aspartic 20.2 83 0.0029 30.5 4.2 32 89-120 231-270 (478)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.7e-57 Score=439.30 Aligned_cols=276 Identities=24% Similarity=0.452 Sum_probs=231.6
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCC
Q 016180 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (394)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 160 (394)
++..++.+.+|+++|+||||||+|.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 48 ~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 112 (370)
T 3psg_A 48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLAC--SDHNQFNPDDSSTFEATS------------- 112 (370)
T ss_dssp CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-------------
T ss_pred ecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCccc--CCCCCCCCccCcCcEECC-------------
Confidence 45556789999999999999999999999999999999999984456 678999999999999987
Q ss_pred CCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCc--------
Q 016180 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS-------- 230 (394)
Q Consensus 161 c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~s-------- 230 (394)
+.|.+.|++|+. .|.+++|+|++|+. .+++|.|||+....+. | ...++||||||++.++
T Consensus 113 -----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~ 181 (370)
T 3psg_A 113 -----QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVF 181 (370)
T ss_dssp -----EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHH
T ss_pred -----cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHH
Confidence 999999999985 59999999999987 9999999999988763 4 6789999999998765
Q ss_pred --hhhhhhhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEec-cCCCcEEE
Q 016180 231 --LISQMRTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG-VSTPDIVI 303 (394)
Q Consensus 231 --l~~ql~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~-~~~~~~ii 303 (394)
+++| +.+.+++||+||.+... |+|+||| .+++.|+ +.|+|+. ...||+|+|++|+|+++.+. .....+|+
T Consensus 182 ~~l~~q-g~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~-l~~~pv~-~~~~w~v~l~~i~v~g~~~~~~~~~~aii 258 (370)
T 3psg_A 182 DNLWDQ-GLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGS-LNWVPVS-VEGYWQITLDSITMDGETIACSGGCQAIV 258 (370)
T ss_dssp HHHHHT-TCSSSSEEEEEEC-----CEEEEETCCCGGGBSSC-CEEEECS-EETTEEEEECEEESSSSEEECTTCEEEEE
T ss_pred HHHHHC-CCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCc-ceeeccc-ccceeEEEEeEEEECCEEEecCCCceEEE
Confidence 3334 56788999999998632 9999999 4456665 9999999 77899999999999998763 45678999
Q ss_pred cC-------------------C-----CccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcC
Q 016180 304 DS-------------------D-----PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGI 358 (394)
Q Consensus 304 Ds-------------------~-----~~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~ 358 (394)
|| . ...+..+|.... .+|+|+|+|+|++|+||+++|+++ . +..|+. |.+.
T Consensus 259 DTGTs~~~lP~~~~~~i~~~i~a~~~~~g~~~v~C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~-~-~~~C~~~~~~~ 333 (370)
T 3psg_A 259 DTGTSLLTGPTSAIANIQSDIGASENSDGEMVISCSSID---SLPDIVFTIDGVQYPLSPSAYILQ-D-DDSCTSGFEGM 333 (370)
T ss_dssp CTTCCSEEEEHHHHHHHHHHTTCEECTTCCEECCGGGGG---GCCCEEEEETTEEEEECHHHHEEE-C-SSCEEESEEEE
T ss_pred cCCCCcEECCHHHHHHHHHHhCCcccCCCcEEEECCCcc---cCCcEEEEECCEEEEECHHHhccc-C-CCEEEEEEEeC
Confidence 99 1 111233455433 789999999999999999999998 3 346997 8764
Q ss_pred C-----CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 359 T-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 359 ~-----~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+ +..||||++|||++|+|||++++|||||+++
T Consensus 334 ~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 334 DVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp CCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 2 3369999999999999999999999999985
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.8e-56 Score=436.27 Aligned_cols=276 Identities=23% Similarity=0.388 Sum_probs=233.1
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCcccccCCCCccccCCCCC
Q 016180 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (394)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~--~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (394)
+..++.+.+|+++|+||||||+|.|+|||||+++||+|..|.. ..|. .|+.|||++|+||+..+
T Consensus 54 ~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~--~~~~y~~~~SsT~~~~~------------ 119 (383)
T 2x0b_A 54 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG------------ 119 (383)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHH--TSCCBCGGGCTTCEEEE------------
T ss_pred eeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCccccc--CCCCCCCCCCCcEEECC------------
Confidence 3345688999999999999999999999999999999999962 3684 67999999999999987
Q ss_pred CCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCc-------
Q 016180 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------- 230 (394)
Q Consensus 160 ~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~s------- 230 (394)
|.|.+.|++|+.. |.+++|+|++|+. .++ |.|||++...+. | ...+|||||||++.++
T Consensus 120 ------~~~~i~Yg~Gs~~-G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~ 186 (383)
T 2x0b_A 120 ------TELTLRYSTGTVS-GFLSQDIITVGGI-----TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPI 186 (383)
T ss_dssp ------EEEEEECSSCEEE-EEEEEEEEEETTE-----EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCH
T ss_pred ------cEEEEEcCCccEE-EEEEeeEEEEcCc-----eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCcH
Confidence 9999999999854 9999999999987 888 999999998663 4 5789999999998776
Q ss_pred ---hhhhhhhccCCceEEeecCCC------CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEe-ccCC
Q 016180 231 ---LISQMRTTIAGKFSYCLVPVS------STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVST 298 (394)
Q Consensus 231 ---l~~ql~~~~~~~Fs~~l~~~~------~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~~ 298 (394)
+++| +.+.+++||+||.+.. .|+|+||| .+++.|+ +.|+|+. ...||+|+|++|+|+++.+ ....
T Consensus 187 ~~~l~~q-g~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~-l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~ 263 (383)
T 2x0b_A 187 FDNIISQ-GVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN-FHYINLI-KTGVWQIQMKGVSVGSSTLLCEDG 263 (383)
T ss_dssp HHHHHTT-TCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEE-EEEEEBS-STTSCEEEECEEEESSCCCBSTTC
T ss_pred HHHHHhC-CCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCc-eEEEEcC-CCceEEEEEeEEEeCCceEEcCCC
Confidence 3445 5678899999998862 39999999 3455665 9999999 7899999999999999874 3466
Q ss_pred CcEEEcC-------------------CC----ccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEE
Q 016180 299 PDIVIDS-------------------DP----TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCS 353 (394)
Q Consensus 299 ~~~iiDs-------------------~~----~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~ 353 (394)
..+|+|| .. ..+..+|+... .+|+|+|+|+|++|+||+++|+++... +..|+
T Consensus 264 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~g~~~v~C~~~~---~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~ 340 (383)
T 2x0b_A 264 CLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGP---TLPDISFHLGGKEYTLTSADYVFQESYSSKKLCT 340 (383)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGTT---TCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEE
T ss_pred cEEEEcCCCceEEcCHHHHHHHHHHhCCcccCCcEEEeccccc---cCceEEEEECCEEEEECHHHhEeeccCCCCCeEE
Confidence 7899999 11 12334576543 789999999999999999999987653 45899
Q ss_pred E-EEcCC-----CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 354 V-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 354 ~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
. |++.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 341 ~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 341 LAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp BSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 6 87642 4689999999999999999999999999975
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-54 Score=418.20 Aligned_cols=278 Identities=25% Similarity=0.454 Sum_probs=231.9
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
+..+..|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~----------------- 79 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPAC--KTHSRFQPSQSSTYSQPG----------------- 79 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCBCCS-----------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--CCCCcCCcccCcceEECC-----------------
Confidence 4578899999999999999999999999999999999975567 467999999999999987
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCc------hhhhh-
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQM- 235 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~s------l~~ql- 235 (394)
|.|.+.|++|+. .|.+++|+|++|+. +++++.|||+....+. | ....+||||||++.++ ++.+|
T Consensus 80 -~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 152 (351)
T 1tzs_A 80 -QSFSIQYGTGSL-SGIIGADQVSVEGL-----TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMM 152 (351)
T ss_dssp -CEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHH
T ss_pred -CEEEEEeCCCCe-EEEEEEeEEEECCe-----EECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHH
Confidence 999999999985 59999999999987 8999999999987663 4 5688999999998765 22232
Q ss_pred --hhccCCceEEeecCCC----CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEe-ccCCCcEEEcCC
Q 016180 236 --RTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVSTPDIVIDSD 306 (394)
Q Consensus 236 --~~~~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~~~~~iiDs~ 306 (394)
+.+.+++||+||.+.. .|+|+||| .+++.|+ +.|+|+. ...||.|+|++|+|+++.+ ......+|+||.
T Consensus 153 ~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSG 230 (351)
T 1tzs_A 153 AQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGS-LNWVPVT-KQAYWQIALDNIQVGGTVMFCSEGCQAIVDTG 230 (351)
T ss_dssp HTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSC-CEEEECS-EETTEEEEEEEEEETTEEEECTTCEEEEECTT
T ss_pred HCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCc-eEEEecC-CCceEEEEeCEEEECCceEEcCCCceEEeccC
Confidence 5567899999998873 39999999 3456665 9999999 7789999999999999875 345678999991
Q ss_pred -----------------------CccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEEE-EEcCC-
Q 016180 307 -----------------------PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT- 359 (394)
Q Consensus 307 -----------------------~~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~- 359 (394)
...+...|+... .+|+|+|+|+|++++||+++|+++... +..|+. |++.+
T Consensus 231 Ts~~~lP~~~~~~l~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~ 307 (351)
T 1tzs_A 231 TSLITGPSDKIKQLQNAIGAAPVDGEYAVECANLN---VMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDI 307 (351)
T ss_dssp CSSEEECHHHHHHHHHHHTCEECSSSEEECGGGGG---GSCCEEEEETTEEEEECTTTSEECC-----CCEEESEEECCC
T ss_pred CcceeCCHHHHHHHHHHhCCcccCCeEEEeCCCCc---cCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEECCC
Confidence 112234676543 689999999999999999999987642 358997 87642
Q ss_pred ----CCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 360 ----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 360 ----~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
.+.||||++|||++|+|||++++|||||+++|..
T Consensus 308 ~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 308 HPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp CTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred CCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 4689999999999999999999999999999964
No 4
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=9.5e-55 Score=428.37 Aligned_cols=291 Identities=24% Similarity=0.434 Sum_probs=238.2
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCC-----
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK----- 159 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~----- 159 (394)
+..+++|+++|+||||||+|.|+|||||+++||+|.+| .+|+||+.+.|.++.|......
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c---------------~~Sst~~~v~C~s~~C~~~~~~~~~~c 80 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---------------YVSSTYRPVRCRTSQCSLSGSIACGDC 80 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS---------------CCCTTCEECBTTSHHHHHTTCCEEECC
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC---------------CCCCCcCccCCCcccccccccCCCccc
Confidence 34678999999999999999999999999999999854 3799999999999999765432
Q ss_pred ------CCCCCCceeeEec-CCCCeeeeEEEEEEEEecCCCCC----cccCCceEEEeEeecCC-CCCCCcceeeecCCC
Q 016180 160 ------SCSGVNCQYSVSY-GDGSFSNGNLATETVTLGSTTGQ----AVALPGITFGCGTNNGG-LFNSKTTGIVGLGGG 227 (394)
Q Consensus 160 ------~c~~~~~~~~~~Y-g~gs~~~G~~~~D~v~~g~~~~~----~~~~~~~~fg~~~~~~~-~~~~~~~GIlGLg~~ 227 (394)
.|.++.|.|.+.| ++|+.+.|++++|+|+|+..++. .+.++++.|||+..... .+...++||||||++
T Consensus 81 ~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~ 160 (413)
T 3vla_A 81 FNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRT 160 (413)
T ss_dssp SSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSS
T ss_pred ccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCC
Confidence 3444579999999 58877789999999999865443 36889999999998632 123678999999999
Q ss_pred CCchhhhhhhc--cCCceEEeecCCCC--ceEEeCCCCc-------cCCCCeeeeecc-CC------------CCceEEE
Q 016180 228 DISLISQMRTT--IAGKFSYCLVPVSS--TKINFGTNGI-------VSGPGVVSTPLT-KA------------KTFYVLT 283 (394)
Q Consensus 228 ~~sl~~ql~~~--~~~~Fs~~l~~~~~--g~l~fGg~~~-------~~g~~~~~~p~~-~~------------~~~w~v~ 283 (394)
.+|+++||... .+++||+||.+... |+|+||+.+. +.++.+.|+||+ +. ..||+|+
T Consensus 161 ~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~ 240 (413)
T 3vla_A 161 RIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240 (413)
T ss_dssp SSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred CcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence 99999998642 27999999998532 9999999432 344449999999 31 1799999
Q ss_pred EEEEEEccEEecc----------CCCcEEEcC-----------------------C--------CccccccccccccC--
Q 016180 284 IDAISVGNQRLGV----------STPDIVIDS-----------------------D--------PTGSLELCYSFNSL-- 320 (394)
Q Consensus 284 l~~i~v~~~~~~~----------~~~~~iiDs-----------------------~--------~~~~~~~c~~~~~~-- 320 (394)
|++|+||++.+.. +.+++|||| . ....++.||..++.
T Consensus 241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 320 (413)
T 3vla_A 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILS 320 (413)
T ss_dssp CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCE
T ss_pred EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCccc
Confidence 9999999998721 357899999 1 11235789987543
Q ss_pred ----CCCCeEEEEEeC--cEEEeccceeEEEeCCceEEEEEEcCC---CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 321 ----SQVPEVTIHFRG--ADVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 321 ----~~~P~i~f~f~g--~~~~l~~~~~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
..+|+|+|+|+| ++|+|++++|+++..++..|++|+..+ .+.||||+.|||++|+|||++++|||||++.
T Consensus 321 ~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 321 TRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp ETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred cccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence 268999999998 899999999999876678999977653 2689999999999999999999999999853
No 5
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=6e-55 Score=417.61 Aligned_cols=274 Identities=22% Similarity=0.396 Sum_probs=230.9
Q ss_pred ccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCC
Q 016180 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (394)
Q Consensus 83 ~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~ 162 (394)
..++.+.+|+++|.||||||++.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 8 l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~--------------- 70 (323)
T 3cms_A 8 LTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNAC--KNHQRFDPRKSSTFQNLG--------------- 70 (323)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE---------------
T ss_pred eEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccc--cCCCCCCCccCCCeEECC---------------
Confidence 335578899999999999999999999999999999999954478 467899999999999987
Q ss_pred CCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCC-CC-CCCcceeeecCCCCCc----------
Q 016180 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS---------- 230 (394)
Q Consensus 163 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GIlGLg~~~~s---------- 230 (394)
|.|.+.|++|+. .|.+++|+|++++. +++++.|||++...+ .| ....+||||||++.++
T Consensus 71 ---~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 141 (323)
T 3cms_A 71 ---KPLSIHYGTGSM-QGILGYDTVTVSNI-----VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDN 141 (323)
T ss_dssp ---EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHH
T ss_pred ---cEEEEEeCCCCe-EEEEEEEEEEECCe-----EEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHH
Confidence 999999999985 59999999999987 899999999998866 34 4678999999998765
Q ss_pred hhhhhhhccCCceEEeecCCCC-ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEec-cCCCcEEEcC-
Q 016180 231 LISQMRTTIAGKFSYCLVPVSS-TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG-VSTPDIVIDS- 305 (394)
Q Consensus 231 l~~ql~~~~~~~Fs~~l~~~~~-g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~-~~~~~~iiDs- 305 (394)
+.+| +.+.+++||+||.+... |+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+. .....+|+||
T Consensus 142 l~~q-~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSG 218 (323)
T 3cms_A 142 MMNR-HLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGS-LHWVPVT-VQQYWQFTVDSVTISGVVVACEGGCQAILDTG 218 (323)
T ss_dssp HHHT-TCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEE-EEEEECS-SBTTBEEEEEEEEETTEEEESTTCEEEEECTT
T ss_pred HHHC-CCCCCCEEEEEECCCCCCEEEEECCCChhhccCc-eEEEECc-cCCeEEEEEeeEEECCEEeecCCCcEEEEecC
Confidence 2334 55678999999998744 9999999 3455565 9999999 78899999999999998873 4567899999
Q ss_pred ------------------C-----CccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcCC-C
Q 016180 306 ------------------D-----PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-N 360 (394)
Q Consensus 306 ------------------~-----~~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~-~ 360 (394)
. ...+..+|+... .+|+|+|+|+|++++||+++|+++ ++..|+. |++.+ .
T Consensus 219 Tt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~--~~~~C~~~i~~~~~~ 293 (323)
T 3cms_A 219 TSKLVGPSSDILNIQQAIGATQNQYGEFDIDCDNLS---YMPTVVFEINGKMYPLTPSAYTSQ--DQGFCTSGFQSENHS 293 (323)
T ss_dssp CCSEEECHHHHHHHHHHHTCEEETTTEEEECTTCTT---TSCCEEEEETTEEEEECHHHHEEE--ETTEEEESEEEC---
T ss_pred CccEeCCHHHHHHHHHHhCCeecCCCcEEEECCCCc---cCceEEEEECCEEEEECHHHhccC--CCCEEEEEEEeCCCC
Confidence 1 111233565433 789999999999999999999998 3468997 88764 5
Q ss_pred CcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 361 SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 361 ~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+.||||++|||++|+|||++++|||||+++
T Consensus 294 ~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 294 QKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 789999999999999999999999999975
No 6
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=4.1e-54 Score=412.08 Aligned_cols=278 Identities=24% Similarity=0.374 Sum_probs=232.2
Q ss_pred cccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCC
Q 016180 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (394)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (394)
+.......+..|+++|.||||+|++.|+|||||+++||+|.+|. .| .+.++.|||++|+||+...
T Consensus 6 v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~c-~~~~~~y~~~~SsT~~~~~------------ 70 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--NC-GSGQTKYDPNQSSTYQADG------------ 70 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--SC-CTTSCCBCGGGCTTCEEEE------------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--hH-hcCCCCCCcccCCCeeeCC------------
Confidence 44455678899999999999999999999999999999999998 67 5778999999999999865
Q ss_pred CCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCC-CCCcceeeecCCCCCc-------h
Q 016180 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS-------L 231 (394)
Q Consensus 160 ~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GIlGLg~~~~s-------l 231 (394)
|.|.+.|++|+.+.|.+++|+|++++. +++++.|||++..++.| ....+||||||++.++ +
T Consensus 71 ------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~ 139 (325)
T 2apr_A 71 ------RTWSISYGDGSSASGILAKDNVNLGGL-----LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTP 139 (325)
T ss_dssp ------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCH
T ss_pred ------CEEEEEECCCCCEEEEEEEEEEEECCE-----EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCH
Confidence 999999999997779999999999987 89999999999887656 5569999999998654 3
Q ss_pred hhhh---hhccCCceEEeecCC---CCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEE
Q 016180 232 ISQM---RTTIAGKFSYCLVPV---SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVI 303 (394)
Q Consensus 232 ~~ql---~~~~~~~Fs~~l~~~---~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ii 303 (394)
+.+| +.+.+++||+||.+. ..|+|+||| .+++.|+ +.|+|+.+...+|.|+|++|+||+ .+......+||
T Consensus 140 ~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~v~l~~i~vg~-~~~~~~~~~ii 217 (325)
T 2apr_A 140 MDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGS-LTTVPIDNSRGWWGITVDRATVGT-STVASSFDGIL 217 (325)
T ss_dssp HHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSC-CEEEECBCTTSSCEEEECEEEETT-EEEECCEEEEE
T ss_pred HHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCc-eEEEEccCCCCEEEEEEeEEEECC-EecCCCceEEE
Confidence 3443 346789999999653 239999999 3456665 999999734679999999999999 44456678999
Q ss_pred cCC-----------------------C-ccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcC
Q 016180 304 DSD-----------------------P-TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGI 358 (394)
Q Consensus 304 Ds~-----------------------~-~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~ 358 (394)
||. . ..+..+|+. ..+|+|+|+|+|.+++||+++|+++.. +..|++ |++.
T Consensus 218 DSGTs~~~lP~~~~~~~~~~~~~~~~~~g~~~~~C~~----~~~p~i~f~f~g~~~~ip~~~~~~~~~-~~~C~~~i~~~ 292 (325)
T 2apr_A 218 DTGTTLLILPNNIAASVARAYGASDNGDGTYTISCDT----SAFKPLVFSINGASFQVSPDSLVFEEF-QGQCIAGFGYG 292 (325)
T ss_dssp CTTCSSEEEEHHHHHHHHHHHTCEECSSSCEEECSCG----GGCCCEEEEETTEEEEECGGGGEEEEE-TTEEEESEEEE
T ss_pred ecCCccEECCHHHHHHHHHHHhcccCCCCeEEEECCC----CCCCcEEEEECCEEEEECHHHEEEcCC-CCeEEEEEEcC
Confidence 991 0 112234542 148999999999899999999998754 568998 7765
Q ss_pred CCCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 359 TNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 359 ~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+.+.||||++|||++|+|||++++|||||+++
T Consensus 293 ~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 293 NWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp SSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 56789999999999999999999999999975
No 7
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.4e-54 Score=414.62 Aligned_cols=276 Identities=26% Similarity=0.448 Sum_probs=230.5
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCC
Q 016180 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (394)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c 161 (394)
+..++.+.+|+++|.||||||++.|++||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 4 ~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 67 (320)
T 4aa9_A 4 PLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVC--KNHHRFDPRKSSTFRNLG-------------- 67 (320)
T ss_dssp ----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE--------------
T ss_pred cceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcccc--CCCCCCCCCCCcCeEcCC--------------
Confidence 3445678999999999999999999999999999999999984456 567999999999999987
Q ss_pred CCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCC-CC-CCCcceeeecCCCCCc------hhh
Q 016180 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------LIS 233 (394)
Q Consensus 162 ~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GIlGLg~~~~s------l~~ 233 (394)
|.|.+.|++|+. .|.+++|+|++|+. +++++.|||+....+ .| ....+||||||++.++ ++.
T Consensus 68 ----~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 137 (320)
T 4aa9_A 68 ----KPLSIHYGTGSM-EGFLGYDTVTVSNI-----VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFD 137 (320)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHH
T ss_pred ----cEEEEEECCcEE-EEEEEEEEEEECCE-----eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHH
Confidence 999999999985 59999999999997 999999999999877 34 5678999999997654 333
Q ss_pred hh---hhccCCceEEeecCC-CCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEec-cCCCcEEEcC-
Q 016180 234 QM---RTTIAGKFSYCLVPV-SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG-VSTPDIVIDS- 305 (394)
Q Consensus 234 ql---~~~~~~~Fs~~l~~~-~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~-~~~~~~iiDs- 305 (394)
+| +.+.+++||+||.+. ..|+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+. .....+||||
T Consensus 138 ~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsG 215 (320)
T 4aa9_A 138 NMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGS-LHWVPVT-LQQYWQFTVDSVTINGVAVACVGGCQAILDTG 215 (320)
T ss_dssp HHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEE-EEEEECS-SBTTBEEEECEEEETTEEEESTTCEEEEECTT
T ss_pred HHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCc-eEEEEcc-cCCceEEEEeEEEECCEEeccCCCcEEEEECC
Confidence 33 557789999999986 339999999 3456665 9999999 78999999999999998873 3467899999
Q ss_pred ------------------C-----CccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcCC-C
Q 016180 306 ------------------D-----PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-N 360 (394)
Q Consensus 306 ------------------~-----~~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~-~ 360 (394)
. ...+..+|+... .+|+|+|+|+|++++||+++|+.+ ++..|+. |++.. .
T Consensus 216 tt~~~lP~~~~~~i~~~~~~~~~~~g~~~~~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~--~~~~C~~~i~~~~~~ 290 (320)
T 4aa9_A 216 TSVLFGPSSDILKIQMAIGATENRYGEFDVNCGNLR---SMPTVVFEINGRDYPLSPSAYTSK--DQGFCTSGFQGDNNS 290 (320)
T ss_dssp CSSEEEEHHHHHHHHHHTTCEECTTSCEEECGGGGG---GCCCEEEEETTEEEEECHHHHEEE--ETTEEEESEEEETTC
T ss_pred CCcEECCHHHHHHHHHHhCCcccCCCcEEEeCCCCC---cCceEEEEECCEEEEECHHHhccC--CCCeEEEEEEcCCCC
Confidence 1 112233555443 689999999999999999999977 3457997 87754 4
Q ss_pred CcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 361 SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 361 ~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+.||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 291 ELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 679999999999999999999999999985
No 8
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.9e-54 Score=412.93 Aligned_cols=281 Identities=23% Similarity=0.373 Sum_probs=232.8
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 016180 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (394)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~ 163 (394)
....+..|+++|.||||+|++.|+|||||+++||+|.+|. .|..+.++.|||++|+||+.++|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~~~~~~y~~~~SsT~~~~~~--------------- 72 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP--KSSATGHAIYTPSKSSTSKKVSG--------------- 72 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCGGGCTTCEECTT---------------
T ss_pred CCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC--ccccCCCCcCCcccCcCceEcCC---------------
Confidence 4567889999999999999999999999999999999998 67667789999999999998642
Q ss_pred CCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCC--CCCcceeeecCCCCCch---------h
Q 016180 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDISL---------I 232 (394)
Q Consensus 164 ~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~sl---------~ 232 (394)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||+...++.| ....+||||||++.++. +
T Consensus 73 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 145 (329)
T 3c9x_A 73 --ASWSISYGDGSSSSGDVYTDKVTIGGF-----SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWF 145 (329)
T ss_dssp --CBEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHH
Confidence 899999999997779999999999987 89999999999877654 36789999999976653 3
Q ss_pred hhhh-hccCCceEEeecCCCCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcCC---
Q 016180 233 SQMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSD--- 306 (394)
Q Consensus 233 ~ql~-~~~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs~--- 306 (394)
.+|. .+.+++||+||.+...|+|+||| .+++.|+ +.|+|+.+...+|.|+|++|+|+++.+......+||||.
T Consensus 146 ~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~ 224 (329)
T 3c9x_A 146 SNAASSLAEPLFTADLRHGQNGSYNFGYIDTSVAKGP-VAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTL 224 (329)
T ss_dssp HHHHTTSSSSEEEEECCSSSCEEEEESSCCGGGCSSC-EEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCS
T ss_pred HHHHHhcCCCEEEEEecCCCCcEEEEeCcChhhcccc-eEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCc
Confidence 3432 25679999999875459999999 3456665 999999734679999999999999877556678999990
Q ss_pred -------------C--ccc---cccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEEE-EEcCC-CCcce
Q 016180 307 -------------P--TGS---LELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-NSVPI 364 (394)
Q Consensus 307 -------------~--~~~---~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~-~~~~i 364 (394)
. ... ...-|..+|...+|+|+|+|+|++++||+++|++...+ ...|++ |++.+ .+.||
T Consensus 225 ~~lp~~~~~~i~~~i~~a~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~I 304 (329)
T 3c9x_A 225 LLLDDNVVDAYYANVQSAQYDNQQEGVVFDCDEDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSSSGIGINI 304 (329)
T ss_dssp EEECHHHHHHHHTTCTTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEECTTTTSEE
T ss_pred EeCCHHHHHHHHHhCCCcEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcCCCCCcEE
Confidence 0 000 00112234545799999999999999999999987633 368998 88764 57899
Q ss_pred echhhhceeEEEEECCCCEEEEeeC
Q 016180 365 YGNIMQTNFLVGYDIEQQTVSFKPT 389 (394)
Q Consensus 365 lG~~fl~~~y~vfD~~~~rigfa~~ 389 (394)
||++|||++|+|||++++|||||+.
T Consensus 305 LG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 305 FGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred EChHHhccEEEEEECCCCEEeEecC
Confidence 9999999999999999999999984
No 9
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=5.2e-54 Score=412.03 Aligned_cols=280 Identities=21% Similarity=0.329 Sum_probs=230.4
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 016180 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (394)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~ 163 (394)
....+..|+++|.||||+|++.|+|||||+++||+|.+|. .|.. .++.|||++|+||+.+.|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~-~~~~y~~~~SsT~~~~~~--------------- 71 (329)
T 1oew_A 10 IDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT--ASEV-XQTIYTPSKSTTAKLLSG--------------- 71 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--GGGC--CCCBCGGGCTTCEEEEE---------------
T ss_pred cCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC--cccc-ccCccCCccCccceecCC---------------
Confidence 3457889999999999999999999999999999999998 6755 788999999999998642
Q ss_pred CCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCC--CCCcceeeecCCCCCch---------h
Q 016180 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDISL---------I 232 (394)
Q Consensus 164 ~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~sl---------~ 232 (394)
|.|.+.|++|+.+.|.+++|+|++|+. .++++.|||++..++.| ....+||||||++.++. +
T Consensus 72 --~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 144 (329)
T 1oew_A 72 --ATWSISYGDGSSSSGDVYTDTVSVGGL-----TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFF 144 (329)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHH
Confidence 899999999997779999999999987 89999999999887654 36789999999976653 3
Q ss_pred hhhhh-ccCCceEEeecCCCCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcCC---
Q 016180 233 SQMRT-TIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSD--- 306 (394)
Q Consensus 233 ~ql~~-~~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs~--- 306 (394)
.+|.. +.+++||+||.+...|+|+||| .+++.|+ +.|+|+.+...+|.|+|++|+|+++.+......+||||.
T Consensus 145 ~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~ 223 (329)
T 1oew_A 145 DNAKASLDSPVFTADLGYHAPGTYNFGFIDTTAYTGS-ITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTL 223 (329)
T ss_dssp HHHTTTSSSSEEEEECCSSSCEEEEESCCCTTSSSSC-CEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCS
T ss_pred HHHHHhccCcEEEEEccCCCCeEEEEeccChHhcccc-eEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCC
Confidence 44432 5679999999875459999999 3466665 999999734679999999999999776445568999991
Q ss_pred -------------C--cc---ccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEEE-EEcCC-CCcce
Q 016180 307 -------------P--TG---SLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-NSVPI 364 (394)
Q Consensus 307 -------------~--~~---~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~-~~~~i 364 (394)
. .. ....-|..+|...+|+|+|+|+|++++||+++|+++..+ ...|++ |++.+ .+.||
T Consensus 224 ~~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~i 303 (329)
T 1oew_A 224 LYLPATVVSAYWAQVSGAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINI 303 (329)
T ss_dssp EEECHHHHHHHHTTSTTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEESTTTSSEE
T ss_pred EECCHHHHHHHHHhCCCcEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCCCCCceE
Confidence 0 00 001122334555799999999999999999999987632 468998 87764 57899
Q ss_pred echhhhceeEEEEEC-CCCEEEEeeC
Q 016180 365 YGNIMQTNFLVGYDI-EQQTVSFKPT 389 (394)
Q Consensus 365 lG~~fl~~~y~vfD~-~~~rigfa~~ 389 (394)
||++|||++|+|||+ +++|||||++
T Consensus 304 LG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 304 FGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred EChHHhcCEEEEEECCCCceEEEecC
Confidence 999999999999999 9999999984
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.7e-54 Score=412.45 Aligned_cols=274 Identities=27% Similarity=0.491 Sum_probs=231.9
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 016180 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (394)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~ 163 (394)
+...+..|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 7 l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~---------------- 68 (329)
T 1htr_B 7 MAYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQAC--TSHSRFNPSESSTYSTNG---------------- 68 (329)
T ss_dssp GGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE----------------
T ss_pred eEEcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCccc--CCCCcCCCccCCCeEECC----------------
Confidence 33778899999999999999999999999999999999974457 457899999999999987
Q ss_pred CCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCch------hhhh
Q 016180 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDISL------ISQM 235 (394)
Q Consensus 164 ~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~sl------~~ql 235 (394)
|.|.+.|++|+. .|.+++|+|++|+. +++++.|||+....+. | ....+||||||++.++. +.+|
T Consensus 69 --~~~~i~Yg~gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (329)
T 1htr_B 69 --QTFSLQYGSGSL-TGFFGYDTLTVQSI-----QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGM 140 (329)
T ss_dssp --EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHH
T ss_pred --cEEEEEeCCCCe-EEEEEeeeEEEcce-----EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHH
Confidence 999999999987 59999999999987 8999999999988663 4 56889999999987763 2232
Q ss_pred ---hhccCCceEEeecCCC---CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEec--cCCCcEEEcC
Q 016180 236 ---RTTIAGKFSYCLVPVS---STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG--VSTPDIVIDS 305 (394)
Q Consensus 236 ---~~~~~~~Fs~~l~~~~---~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~--~~~~~~iiDs 305 (394)
+.+.+++||+||.+.. .|+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+. .....+|+||
T Consensus 141 ~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDS 218 (329)
T 1htr_B 141 VQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQ-IYWAPVT-QELYWQIGIEEFLIGGQASGWCSEGCQAIVDT 218 (329)
T ss_dssp HHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEE-EEEEEBC-SSSSCEEEECEEEETTEECCTTTTCEEEEECT
T ss_pred HhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCc-eEEEECC-CCceEEEEEeEEEECCceeeecCCCceEEEec
Confidence 4567899999999874 39999999 3455565 9999999 78899999999999998763 4567899999
Q ss_pred -------------------C-----CccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcCC-
Q 016180 306 -------------------D-----PTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT- 359 (394)
Q Consensus 306 -------------------~-----~~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~- 359 (394)
. ...+...|+... .+|+|+|+|+|++++||+++|+++.. + .|+. |++.+
T Consensus 219 GTt~~~lp~~~~~~l~~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~-g-~C~~~~~~~~~ 293 (329)
T 1htr_B 219 GTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCNSIQ---NLPSLTFIINGVEFPLPPSSYILSNN-G-YCTVGVEPTYL 293 (329)
T ss_dssp TCCSEEEEGGGHHHHHHHHTCEECTTSCEEECGGGGG---GSCCEEEEETTEEEEECHHHHEEECS-S-CEEESEEEECC
T ss_pred CCccEECCHHHHHHHHHHhCCeecCCCeEEEeCCCcc---cCCcEEEEECCEEEEECHHHhcccCC-C-EEEEEEEECCC
Confidence 1 112334676543 78999999999999999999999876 3 8996 87642
Q ss_pred ----CC-cceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 360 ----NS-VPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 360 ----~~-~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
++ .||||++|||++|+|||++++|||||+++
T Consensus 294 ~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 294 SSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 34 89999999999999999999999999975
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=5.5e-54 Score=411.14 Aligned_cols=273 Identities=25% Similarity=0.463 Sum_probs=230.0
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
++.+..|+++|.||||||++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~----------------- 68 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQAC--SNHNKFKPRQSSTYVETG----------------- 68 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHH--HTSCCBCGGGCTTCEEEE-----------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--cCCCcCCCccCCCeEeCC-----------------
Confidence 4578899999999999999999999999999999999974457 457899999999999987
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCch------hhhh-
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDISL------ISQM- 235 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~sl------~~ql- 235 (394)
|.|.+.|++|+. .|.+++|+|++++. +++++.|||+....+. | ....+||||||++.++. +.+|
T Consensus 69 -~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 141 (324)
T 1am5_A 69 -KTVDLTYGTGGM-RGILGQDTVSVGGG-----SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMG 141 (324)
T ss_dssp -EEEEEECSSCEE-EEEEEEEEEESSSS-----CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred -cEEEEEECCCCe-EEEEEECceeECCc-----EEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHH
Confidence 999999999988 59999999999987 8999999999998763 4 57889999999987653 2232
Q ss_pred --hhccCCceEEeecCCC--CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC----
Q 016180 236 --RTTIAGKFSYCLVPVS--STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS---- 305 (394)
Q Consensus 236 --~~~~~~~Fs~~l~~~~--~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs---- 305 (394)
+.+.+++||+||.+.+ .|+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+......+|+||
T Consensus 142 ~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~ 219 (324)
T 1am5_A 142 SQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGS-IHWIPVT-AEKYWQVALDGITVNGQTAACEGCQAIVDTGTSK 219 (324)
T ss_dssp HTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSC-CEEEEEE-EETTEEEEECEEEETTEECCCCCEEEEECTTCSS
T ss_pred hcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCc-eEEEecC-CCcEEEEEEeEEEECCceeeccCceEEEecCCcc
Confidence 4567899999999874 39999999 3456665 9999999 778999999999999987532237899999
Q ss_pred ---------------CC----ccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcCC-----C
Q 016180 306 ---------------DP----TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-----N 360 (394)
Q Consensus 306 ---------------~~----~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~-----~ 360 (394)
.. ..+...|+... .+|+|+|+|+|++++||+++|+++. +..|+. |++.+ .
T Consensus 220 ~~lp~~~~~~l~~~~~~~~~~g~~~~~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~--~~~C~~~~~~~~~~~~~~ 294 (324)
T 1am5_A 220 IVAPVSALANIMKDIGASENQGEMMGNCASVQ---SLPDITFTINGVKQPLPPSAYIEGD--QAFCTSGLGSSGVPSNTS 294 (324)
T ss_dssp EEECTTTHHHHHHHHTCEECCCCEECCTTSSS---SSCCEEEEETTEEEEECHHHHEEES--SSCEEECEEECCSCCSSS
T ss_pred EECCHHHHHHHHHHhCCcccCCcEEEeCCCcc---cCCcEEEEECCEEEEECHHHhcccC--CCeEEEEEEECccCCCCC
Confidence 11 11223455432 7899999999999999999999986 467996 87642 4
Q ss_pred CcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 361 SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 361 ~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+.||||++|||++|+|||++++|||||+++
T Consensus 295 ~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 295 ELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred CcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 689999999999999999999999999985
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=5e-54 Score=412.30 Aligned_cols=275 Identities=24% Similarity=0.477 Sum_probs=230.4
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
++.+..|+++|.||||+|++.|+|||||+++||+|.+|....| ..++.|||++|+||+...
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~----------------- 69 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLAC--FLHSKYDHEASSSYKANG----------------- 69 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE-----------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCccc--CCcCcCCcccCcCeEECC-----------------
Confidence 4567899999999999999999999999999999999983347 457899999999999876
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCC-CC-CCCcceeeecCCCCCch----------h
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDISL----------I 232 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GIlGLg~~~~sl----------~ 232 (394)
|.|.+.|++|+. .|.+++|+|++|+. +++++.|||++...+ .| ....+||||||++.+++ +
T Consensus 70 -~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 142 (329)
T 1dpj_A 70 -TEFAIQYGTGSL-EGYISQDTLSIGDL-----TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAI 142 (329)
T ss_dssp -EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred -cEEEEEECCceE-EEEEEEEEEEECCe-----EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHH
Confidence 999999999964 59999999999987 899999999998776 34 56789999999987753 3
Q ss_pred hhhhhccCCceEEeecCCC-----CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC
Q 016180 233 SQMRTTIAGKFSYCLVPVS-----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS 305 (394)
Q Consensus 233 ~ql~~~~~~~Fs~~l~~~~-----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs 305 (394)
+| +.+.+++||+||.+.. .|+|+||| .+++.|+ +.|+|+. ...||.|+|++|+|+++.+......+|+||
T Consensus 143 ~q-g~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~aiiDS 219 (329)
T 1dpj_A 143 QQ-DLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGD-ITWLPVR-RKAYWEVKFEGIGLGDEYAELESHGAAIDT 219 (329)
T ss_dssp HT-TCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEE-EEEEECS-SBTTBEEEEEEEEETTEEEECSSCEEEECT
T ss_pred hc-CCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCc-eEEEEcC-CCceEEEEeeeEEECCeEecCCCccEEeeC
Confidence 34 4567899999997752 29999999 3355664 9999999 788999999999999988765678999999
Q ss_pred -------------------CCccccccccccccCC--CCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcCC----
Q 016180 306 -------------------DPTGSLELCYSFNSLS--QVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT---- 359 (394)
Q Consensus 306 -------------------~~~~~~~~c~~~~~~~--~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~---- 359 (394)
........||..+|.. .+|+|+|+|+|.+++||+++|+++.. ..|+. |++.+
T Consensus 220 GTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~--~~C~~~~~~~~~~~~ 297 (329)
T 1dpj_A 220 GTSLITLPSGLAEMINAEIGAKKGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS--GSCISAITPMDFPEP 297 (329)
T ss_dssp TCSCEEECHHHHHHHHHHHTCEECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET--TEEEECEEECCCCTT
T ss_pred CCCcEECCHHHHHHHHHHhCCccCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC--CEEEEEEEecccCCC
Confidence 1111122344444442 68999999999999999999999865 57996 87642
Q ss_pred -CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 360 -NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 360 -~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
.+.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 298 VGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 4689999999999999999999999999975
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.2e-53 Score=414.78 Aligned_cols=278 Identities=22% Similarity=0.363 Sum_probs=233.5
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC-CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~-~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~ 163 (394)
+..+..|+++|.||||+|++.|+|||||+++||+|..|. ...|. .++.|||++|+||+...
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~---------------- 75 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV--GKRFFDPSSSSTFKETD---------------- 75 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC--SSCCBCGGGCTTCEEEE----------------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC--CCCcCCCccCCceEecC----------------
Confidence 457889999999999999999999999999999999997 55784 57899999999999987
Q ss_pred CCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCC------CC-CCCcceeeecCCCCCchhh---
Q 016180 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG------LF-NSKTTGIVGLGGGDISLIS--- 233 (394)
Q Consensus 164 ~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~------~~-~~~~~GIlGLg~~~~sl~~--- 233 (394)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+ .| ....+||||||++.++...
T Consensus 76 --~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 147 (361)
T 1mpp_A 76 --YNLNITYGTGGA-NGIYFRDSITVGGA-----TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEY 147 (361)
T ss_dssp --EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHH
T ss_pred --CeEEEEECCceE-EEEEEEEEEEECCE-----EEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccc
Confidence 999999999995 59999999999987 999999999998865 34 5679999999998665432
Q ss_pred ---------hh---hhccCCceEEeecCCC-CceEEeCC--CCccCCCCeeeeeccCCCC----ceEEEEEEEEEccEEe
Q 016180 234 ---------QM---RTTIAGKFSYCLVPVS-STKINFGT--NGIVSGPGVVSTPLTKAKT----FYVLTIDAISVGNQRL 294 (394)
Q Consensus 234 ---------ql---~~~~~~~Fs~~l~~~~-~g~l~fGg--~~~~~g~~~~~~p~~~~~~----~w~v~l~~i~v~~~~~ 294 (394)
+| +.+.+++||+||.+.. .|.|+||| .+++.|+ +.|+|+. ... +|.|+|++|+|+++.+
T Consensus 148 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~~~~~v~l~~i~v~~~~~ 225 (361)
T 1mpp_A 148 GDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGD-IQYTDVL-KSRGGYFFWDAPVTGVKIDGSDA 225 (361)
T ss_dssp SCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSC-CEEEECE-EETTEEEEEEEEEEEEEETTEEE
T ss_pred cccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCc-eEEEEcc-cCCCceeEEEEEEeEEEECCeee
Confidence 22 4467899999999863 39999999 3456665 9999999 333 9999999999999876
Q ss_pred -ccCCCcEE-EcC-------------------CC------ccccccccccccCCCC-CeEEEEE--e-----CcEEEecc
Q 016180 295 -GVSTPDIV-IDS-------------------DP------TGSLELCYSFNSLSQV-PEVTIHF--R-----GADVKLSR 339 (394)
Q Consensus 295 -~~~~~~~i-iDs-------------------~~------~~~~~~c~~~~~~~~~-P~i~f~f--~-----g~~~~l~~ 339 (394)
......+| ||| .. ..+...|+... .+ |+|+|+| + |++++||+
T Consensus 226 ~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~~~---~~~p~i~f~f~~g~~~~~g~~~~i~~ 302 (361)
T 1mpp_A 226 VSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATESQQGYTVPCSKYQ---DSKTTFSLVLQKSGSSSDTIDVSVPI 302 (361)
T ss_dssp EEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEEETTEEEEEHHHHT---TCCCEEEEEEECTTCSSCEEEEEEEG
T ss_pred ccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccCCCCcEEEECCCcc---cCCCcEEEEEEcCCcCCCCeEEEECH
Confidence 24456899 999 11 11234566543 67 9999999 7 89999999
Q ss_pred ceeEEEeC-CceEEEE-EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 340 SNFFVKVS-EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 340 ~~~~~~~~-~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
++|+++.. ++..|+. |++...+.||||++|||++|+|||++++|||||+++|..
T Consensus 303 ~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 303 SKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp GGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred HHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 99999875 3468985 887546789999999999999999999999999999975
No 14
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4e-54 Score=426.60 Aligned_cols=270 Identities=21% Similarity=0.386 Sum_probs=227.6
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
+..+..|+++|+||||||++.|++||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C--~~~~~ydps~SsT~~~~~----------------- 194 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGC--LTKHLYDSSKSRTYEKDG----------------- 194 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTG--GGSCCBCGGGCTTCEEEE-----------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCcccc--CCCCcCCCccCCceeECC-----------------
Confidence 4578899999999999999999999999999999999975577 467999999999999987
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecC--CC-C-CCCcceeeecCCCCCch------hhh
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNG--GL-F-NSKTTGIVGLGGGDISL------ISQ 234 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~--~~-~-~~~~~GIlGLg~~~~sl------~~q 234 (394)
|.|.+.|++|+. .|.+++|+|++|+. +++ +.|||++... +. | ....+||||||++.++. +.+
T Consensus 195 -~~~~i~YgdGs~-~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~ 266 (453)
T 2bju_A 195 -TKVEMNYVSGTV-SGFFSKDLVTVGNL-----SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVE 266 (453)
T ss_dssp -EEEEEECSSSEE-EEEEEEEEEEETTE-----EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHH
T ss_pred -cEEEEEcCCCCe-EEEEEEEEEEEeCc-----EEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHH
Confidence 999999999995 59999999999987 888 9999999986 53 3 56789999999987653 222
Q ss_pred h---hhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC--
Q 016180 235 M---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS-- 305 (394)
Q Consensus 235 l---~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs-- 305 (394)
| +.+.+++||+||.+.+. |+|+||| .+++.|+ +.|+|+. ...||.|+|+ |+|+++. . ....+|+||
T Consensus 267 L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~-l~~~pv~-~~~~w~V~l~-I~Vgg~~-~-~~~~aIiDSGT 341 (453)
T 2bju_A 267 LKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGP-LTYEKLN-HDLYWQITLD-AHVGNIM-L-EKANCIVDSGT 341 (453)
T ss_dssp HHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEE-EEEEEEE-EETTEEEEEE-EEETTEE-E-EEEEEEECTTC
T ss_pred HHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCc-eEEEecC-CCceEEEEEE-EEECcEE-e-ccccEEEcCCC
Confidence 2 45678999999998632 9999999 3455665 9999999 7789999999 9999943 3 566899999
Q ss_pred -----------------CC-----c-cccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEEE-EEcCC
Q 016180 306 -----------------DP-----T-GSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT 359 (394)
Q Consensus 306 -----------------~~-----~-~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~ 359 (394)
.. . .+..+|+. ..+|+|+|+|+|++++||+++|+++... +..|+. |++.+
T Consensus 342 sl~~lP~~~~~~l~~~i~~~~~~~g~~~~v~C~~----~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~ 417 (453)
T 2bju_A 342 SAITVPTDFLNKMLQNLDVIKVPFLPFYVTLCNN----SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLD 417 (453)
T ss_dssp CSEEECHHHHHHHTTTSSCEECTTSSCEEEETTC----TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEECEEECC
T ss_pred CeEecCHHHHHHHHHHhCCcccCCCceEEEecCC----CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEEEEEeCC
Confidence 00 1 12334553 2799999999999999999999998753 468986 88765
Q ss_pred --CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 360 --NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 360 --~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
.+.||||++|||++|+|||++++|||||+++
T Consensus 418 ~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 418 FPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 3589999999999999999999999999986
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-53 Score=408.27 Aligned_cols=278 Identities=23% Similarity=0.388 Sum_probs=229.2
Q ss_pred cccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecC--CCCC-------CCCCCCCCCCCCCCCCCcccccCCCC
Q 016180 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCPP-------SQCYMQDSPLFDPKMSSTYKSLPCSS 150 (394)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~--~c~~-------~~C~~~~~~~y~p~~SsT~~~~~c~~ 150 (394)
...++...+..|+++|.||||+|++.|+|||||+++||+|. +|.. ..| ..++.|||++|+||+..+
T Consensus 3 ~~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~--- 77 (334)
T 1j71_A 3 VPTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFC--KQEGTFDPSSSSSAQNLN--- 77 (334)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GSSCCBCGGGCTTCEEEE---
T ss_pred eeEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccc--cCCCcCCcccCCCcccCC---
Confidence 34566667889999999999999999999999999999876 6762 246 467899999999999987
Q ss_pred ccccCCCCCCCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCCCCCcceeeecCCCCC-
Q 016180 151 SQCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI- 229 (394)
Q Consensus 151 ~~C~~~~~~~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~- 229 (394)
|.|.+.|++|+.+.|.+++|+|++|+. +++++.|||++... ..+||||||++.+
T Consensus 78 ---------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~-----~~~GilGLg~~~~~ 132 (334)
T 1j71_A 78 ---------------QDFSIEYGDLTSSQGSFYKDTVGFGGI-----SIKNQQFADVTTTS-----VDQGIMGIGFTADE 132 (334)
T ss_dssp ---------------EEEEEEBTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGS
T ss_pred ---------------CceEEEECCCCEEEEEEEEEEEEECCE-----EEccEEEEEEEecC-----CCccEEEEcCCccc
Confidence 999999999998779999999999986 89999999999863 5789999999764
Q ss_pred -------chhhhh---hhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEec
Q 016180 230 -------SLISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG 295 (394)
Q Consensus 230 -------sl~~ql---~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 295 (394)
+++.|| +.+.+++||+||.+... |+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+
T Consensus 133 ~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~- 209 (334)
T 1j71_A 133 AGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGT-LTALPVT-SSVELRVHLGSINFDGTSV- 209 (334)
T ss_dssp STTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEE-EEEEECC-CSSSCEEEEEEEEETTEEE-
T ss_pred CccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCc-eEEEEcc-CCCeEEEEEeEEEECCEec-
Confidence 344443 45678999999987533 9999999 4566665 9999999 7779999999999999887
Q ss_pred cCCCcEEEcC-------------------CC-ccccccccc-cccCCCCCeEEEEE-eCcEEEeccceeEEEeCCceEEE
Q 016180 296 VSTPDIVIDS-------------------DP-TGSLELCYS-FNSLSQVPEVTIHF-RGADVKLSRSNFFVKVSEDIVCS 353 (394)
Q Consensus 296 ~~~~~~iiDs-------------------~~-~~~~~~c~~-~~~~~~~P~i~f~f-~g~~~~l~~~~~~~~~~~~~~C~ 353 (394)
.....+|+|| .. .......|. .+|. .+|+|+|+| +|++++||+++|+++..++..|+
T Consensus 210 ~~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~C~-~~p~i~f~f~~g~~~~i~~~~y~~~~~~~~~C~ 288 (334)
T 1j71_A 210 STNADVVLDSGTTITYFSQSTADKFARIVGATWDSRNEIYRLPSCD-LSGDAVFNFDQGVKITVPLSELILKDSDSSICY 288 (334)
T ss_dssp EEEEEEEECTTCSSEEECHHHHHHHHHHHTCEEETTTTEEECSSSC-CCSEEEEEESTTCEEEEEGGGGEEECSSSSCEE
T ss_pred cCCccEEEeCCCCcEecCHHHHHHHHHHcCCcccCCCceEEEEcCC-CCCceEEEEcCCcEEEECHHHheeecCCCCeeE
Confidence 3346799999 10 000011222 3343 489999999 57999999999999875555699
Q ss_pred E-EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 354 V-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 354 ~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
+ |.+. +.||||++|||++|+|||++++|||||+++|.+
T Consensus 289 ~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 289 FGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp ESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred EEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 8 7765 579999999999999999999999999999974
No 16
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.4e-53 Score=413.92 Aligned_cols=269 Identities=19% Similarity=0.416 Sum_probs=228.6
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
+..+..|+++|.||||||++.|+|||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~----------------- 118 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGC--SIKNLYDSSKSKSYEKDG----------------- 118 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGG--GGSCCBCGGGCTTCEEEE-----------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccc--cCCCcCCCccCCceEECC-----------------
Confidence 4578899999999999999999999999999999999975567 467999999999999987
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEee----cCCCC-CCCcceeeecCCCCCch------hh
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDISL------IS 233 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GIlGLg~~~~sl------~~ 233 (394)
|.|.+.|++|+. .|.+++|+|++|+. .+++ .|||+.. .. .| ....+||||||++.++. +.
T Consensus 119 -~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~ 189 (375)
T 1miq_A 119 -TKVDITYGSGTV-KGFFSKDLVTLGHL-----SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVV 189 (375)
T ss_dssp -EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHH
T ss_pred -cEEEEEeCCCeE-EEEEEEEEEEEcCc-----eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHH
Confidence 999999999995 59999999999987 8999 9999998 54 45 56789999999987763 22
Q ss_pred hh---hhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC-
Q 016180 234 QM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS- 305 (394)
Q Consensus 234 ql---~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs- 305 (394)
+| +.+.+++||+||.+.+. |+|+||| .+++.|+ +.|+|+. ...||.|+|+ |+|+++.+ ....+|+||
T Consensus 190 ~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~-i~v~g~~~--~~~~aiiDSG 264 (375)
T 1miq_A 190 ELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGN-ITYEKLN-HDLYWQIDLD-VHFGKQTM--EKANVIVDSG 264 (375)
T ss_dssp HHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEE-EEEEEBS-SSSSSEEEEE-EEETTEEE--EEEEEEECTT
T ss_pred HHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCc-eEEEecC-CCceEEEEEE-EEECCEEc--ccceEEecCC
Confidence 22 55678999999998743 9999999 3455565 9999999 7889999999 99999887 557899999
Q ss_pred ------------------CC------ccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeC--CceEEEE-EEcC
Q 016180 306 ------------------DP------TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKGI 358 (394)
Q Consensus 306 ------------------~~------~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~~~C~~-i~~~ 358 (394)
.. ..+..+|+. ..+|+|+|+|+|++++||+++|+++.. ++..|+. |++.
T Consensus 265 Ts~~~lP~~~~~~l~~~~~~~~~~~~g~~~~~C~~----~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~ 340 (375)
T 1miq_A 265 TTTITAPSEFLNKFFANLNVIKVPFLPFYVTTCDN----KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMITMLPV 340 (375)
T ss_dssp BSSEEECHHHHHHHHHHHTCEECTTSSCEEEETTC----TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEESEEEC
T ss_pred CccEEcCHHHHHHHHHHhCCcccCCCCeEEEECCC----CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEEC
Confidence 11 112345664 279999999999999999999999875 3458986 8877
Q ss_pred C--CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 359 T--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 359 ~--~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+ .+.||||++|||++|+|||++++|||||+++
T Consensus 341 ~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 341 DIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp CSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 5 3789999999999999999999999999975
No 17
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.2e-53 Score=423.27 Aligned_cols=280 Identities=26% Similarity=0.448 Sum_probs=230.2
Q ss_pred ccc-ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC-CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCC
Q 016180 82 ADI-IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (394)
Q Consensus 82 ~~~-~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~-~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (394)
.++ ++.+.+|+++|.||||||+|.|+|||||+++||+|..|. ...|. .++.|||++|+||+..+
T Consensus 44 ~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------ 109 (478)
T 1qdm_A 44 VALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKKNG------------ 109 (478)
T ss_dssp GGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBCCC------------
T ss_pred EEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeeeCC------------
Confidence 444 446789999999999999999999999999999999995 34684 56899999999999877
Q ss_pred CCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCc-------
Q 016180 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------- 230 (394)
Q Consensus 160 ~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~s------- 230 (394)
+.|.+.|++|+. .|.+++|+|+||+. .++++.|||++...+. | ...++||||||++.++
T Consensus 110 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~ 177 (478)
T 1qdm_A 110 ------KPAAIQYGTGSI-AGYFSEDSVTVGDL-----VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPV 177 (478)
T ss_dssp ------CEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCH
T ss_pred ------cEEEEEcCCCCe-EEEEEEEEEEECCe-----EECCEEEEEEEecCCcccccccccceecccccccccCCCCcH
Confidence 899999999985 59999999999987 8999999999987653 4 5678999999998776
Q ss_pred ---hhhhhhhccCCceEEeecCCC----CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEe--ccCCC
Q 016180 231 ---LISQMRTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL--GVSTP 299 (394)
Q Consensus 231 ---l~~ql~~~~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~ 299 (394)
+++| +.+.+++||+||.+.. .|+|+||| .+++.|+ +.|+|+. ..+||+|+|++|+|+++.+ .....
T Consensus 178 ~~~l~~q-g~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~-l~~~pv~-~~~~w~v~l~~i~v~g~~~~~~~~~~ 254 (478)
T 1qdm_A 178 WYKMIEQ-GLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGE-HTYVPVT-QKGYWQFDMGDVLVGGKSTGFCAGGC 254 (478)
T ss_dssp HHHHTTT-TCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEE-EEEEEEE-EETTEEEEECCEEETTEECSTTTTCE
T ss_pred HHHHHHC-CCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCC-ceEEecc-CCCeEEEEEeEEEECCEEEeecCCCc
Confidence 3344 5567899999998862 29999999 3456665 9999999 7789999999999999876 23567
Q ss_pred cEEEcC-------------------CCcc------------c--------------------------------------
Q 016180 300 DIVIDS-------------------DPTG------------S-------------------------------------- 310 (394)
Q Consensus 300 ~~iiDs-------------------~~~~------------~-------------------------------------- 310 (394)
.+|+|| .... +
T Consensus 255 ~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~ 334 (478)
T 1qdm_A 255 AAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRS 334 (478)
T ss_dssp EEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC--------------
T ss_pred eEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCccccccccccc
Confidence 899999 1100 0
Q ss_pred ---------------------------------------------ccccccc---------ccC--CCCCeEEEEEeCcE
Q 016180 311 ---------------------------------------------LELCYSF---------NSL--SQVPEVTIHFRGAD 334 (394)
Q Consensus 311 ---------------------------------------------~~~c~~~---------~~~--~~~P~i~f~f~g~~ 334 (394)
...|+.. +|+ ..+|+|+|+|+|++
T Consensus 335 v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~gg~~ 414 (478)
T 1qdm_A 335 VVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKK 414 (478)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGGTTCCCEEEEETTEE
T ss_pred cccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccccccccEEEEECCEE
Confidence 0123222 333 26899999999999
Q ss_pred EEeccceeEEEeCC--ceEEEE-EEcCC-----CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 335 VKLSRSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 335 ~~l~~~~~~~~~~~--~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
|+|+|++|+++... +..|++ |...+ ++.||||++|||++|+|||++++|||||+++
T Consensus 415 ~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 415 FALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 99999999998764 358998 87542 4689999999999999999999999999974
No 18
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.6e-53 Score=410.73 Aligned_cols=276 Identities=23% Similarity=0.381 Sum_probs=232.1
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC--CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCC
Q 016180 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP--PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (394)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~--~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~ 159 (394)
+..++.+.+|+++|.||||||++.|++||||+++||+|..|. ...| ..++.|||++|+||+...
T Consensus 11 ~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~~~------------ 76 (341)
T 3k1w_A 11 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG------------ 76 (341)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEEEE------------
T ss_pred cceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeECC------------
Confidence 344567899999999999999999999999999999999997 2357 467899999999999876
Q ss_pred CCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCc-------
Q 016180 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------- 230 (394)
Q Consensus 160 ~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~s------- 230 (394)
|.|.+.|++|+. .|.+++|+|+||+. .+ ++.|||+....+. | ....+||||||++..+
T Consensus 77 ------~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 143 (341)
T 3k1w_A 77 ------TELTLRYSTGTV-SGFLSQDIITVGGI-----TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPI 143 (341)
T ss_dssp ------EEEEEEETTEEE-EEEEEEEEEEETTE-----EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCH
T ss_pred ------CEEEEEECCcEE-EEEEEEEEEEECCc-----ee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCH
Confidence 999999999984 59999999999987 88 9999999998764 4 5678999999998765
Q ss_pred ---hhhhhhhccCCceEEeecCCC------CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEe-ccCC
Q 016180 231 ---LISQMRTTIAGKFSYCLVPVS------STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVST 298 (394)
Q Consensus 231 ---l~~ql~~~~~~~Fs~~l~~~~------~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~~ 298 (394)
+.+| +.+.+++||+||.+.. .|.|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+ ....
T Consensus 144 ~~~l~~q-g~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~ 220 (341)
T 3k1w_A 144 FDNIISQ-GVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN-FHYINLI-KTGVWQIQMKGVSVGSSTLLCEDG 220 (341)
T ss_dssp HHHHHHH-TCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEE-EEEEECS-STTSCEEEECCEEETTEEEECTTC
T ss_pred HHHHHHC-CCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCc-eEEEecC-CCCEEEEEEeEEEECCEEeecCCC
Confidence 3444 5678999999999875 39999999 4456665 9999999 7899999999999999864 3456
Q ss_pred CcEEEcC-----------------------CCccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEE
Q 016180 299 PDIVIDS-----------------------DPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCS 353 (394)
Q Consensus 299 ~~~iiDs-----------------------~~~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~ 353 (394)
..+|||| ....+..+|.... .+|+|+|+|+|++++||+++|+++... +..|+
T Consensus 221 ~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~g~~~~C~~~~---~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~ 297 (341)
T 3k1w_A 221 CLALVDTGASYISGSTSSIEKLMEALGAKKRLFDYVVKCNEGP---TLPDISFHLGGKEYTLTSADYVFQESYSSKKLCT 297 (341)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCEECSSCEEEEGGGGG---GCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEE
T ss_pred CEEEEECCCChhcCCHHHHHHHHHHcCCeecCCCeEEeCCCCC---cCCcEEEEECCEEEEECHHHheeEccCCCCCeEE
Confidence 7899999 0111233455432 689999999999999999999987542 57899
Q ss_pred E-EEcC-----CCCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 354 V-FKGI-----TNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 354 ~-i~~~-----~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
. |.+. ..+.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 298 LAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp BSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 7 8763 25689999999999999999999999999985
No 19
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=5.1e-53 Score=419.16 Aligned_cols=276 Identities=18% Similarity=0.307 Sum_probs=232.3
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCC
Q 016180 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (394)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~ 160 (394)
.+..+..+.+|+++|.||||||++.|++||||+++||+|..|....| ..++.|||++|+||+..+
T Consensus 129 ~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~~~------------- 193 (451)
T 3qvc_A 129 VELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEKDD------------- 193 (451)
T ss_dssp CCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-------------
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCcccccCC-------------
Confidence 33445578899999999999999999999999999999999975578 567999999999999887
Q ss_pred CCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEee----cCCCC-CCCcceeeecCCCCCc-----
Q 016180 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDIS----- 230 (394)
Q Consensus 161 c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GIlGLg~~~~s----- 230 (394)
+.|.+.|++|+ +.|.++.|+|++|+. .++ +.|||+.. .++ | ....+||||||++.++
T Consensus 194 -----~~f~i~YgdGs-~~G~~~~Dtv~igg~-----~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~ 260 (451)
T 3qvc_A 194 -----TPVKLTSKAGT-ISGIFSKDLVTIGKL-----SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSID 260 (451)
T ss_dssp -----EEEEEECSSEE-EEEEEEEEEEEETTE-----EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCC
T ss_pred -----CEEEEEECCCE-EEEEEEEEEEEECCE-----EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCC
Confidence 99999999999 569999999999987 888 99999998 665 6 5678999999998754
Q ss_pred -----hhhhhhhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcE
Q 016180 231 -----LISQMRTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDI 301 (394)
Q Consensus 231 -----l~~ql~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 301 (394)
+.+| +.+.+++||+||.+.+. |+|+||| .+++.|+ +.|+|+. ...+|.|+|+ |+|+++ ......+
T Consensus 261 ~~~~~L~~q-g~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~-l~~~pv~-~~~~w~v~l~-I~Vgg~--~~~~~~a 334 (451)
T 3qvc_A 261 PYIVELKTQ-NKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGP-LNYEKLN-HDLMWQVDLD-VHFGNV--SSKKANV 334 (451)
T ss_dssp CHHHHHHHT-TSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEE-EEEEECS-STTSSEEEEE-EEETTE--EEEEEEE
T ss_pred CHHHHHHHc-CCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCc-eEEEEcc-cCCeeEEEEE-EEECCc--cCCCceE
Confidence 3344 55788999999998754 9999999 4456665 9999999 8899999999 999998 3456789
Q ss_pred EEcC-------------------C-CccccccccccccC-CCCCeEEEEEeCcEEEeccceeEEEeC--CceEEEE-EEc
Q 016180 302 VIDS-------------------D-PTGSLELCYSFNSL-SQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV-FKG 357 (394)
Q Consensus 302 iiDs-------------------~-~~~~~~~c~~~~~~-~~~P~i~f~f~g~~~~l~~~~~~~~~~--~~~~C~~-i~~ 357 (394)
|+|| . .......+|..+|. ..+|+|+|+|+|.+++||+++|+++.. ++..|+. |.+
T Consensus 335 iiDSGTt~i~lP~~~~~~i~~~i~a~~~~~~g~y~v~C~~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~~~i~~ 414 (451)
T 3qvc_A 335 ILDSATSVITVPTEFFNQFVESASVFKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVP 414 (451)
T ss_dssp EECTTBSSEEECHHHHHHHHTTTTCEECTTSSCEEEETTCTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEEECEEE
T ss_pred EEeCCCccccCCHHHHHHHHHHcCCeecCCCCeEEeeCCcCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEEEEEEe
Confidence 9999 0 00111234444554 479999999999999999999999865 2468987 887
Q ss_pred CC--CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 358 IT--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 358 ~~--~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 415 ~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 415 IDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp CCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 75 4789999999999999999999999999985
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.2e-52 Score=404.89 Aligned_cols=277 Identities=21% Similarity=0.391 Sum_probs=228.4
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecC--CCCC-------CCCCCCCCCCCCCCCCCcccccCCCCc
Q 016180 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCPP-------SQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (394)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~--~c~~-------~~C~~~~~~~y~p~~SsT~~~~~c~~~ 151 (394)
..++...+..|+++|.||||+|++.|+|||||+++||+|. +|.. ..| ..++.|||++|+||+..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 2qzx_A 4 AVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFC--KSAGSYSPASSRTSQNLN---- 77 (342)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccc--cCCCcCCcccCCCcccCC----
Confidence 4456667889999999999999999999999999999866 6751 246 467899999999999987
Q ss_pred cccCCCCCCCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCCCCCcceeeecCCCCC--
Q 016180 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (394)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~-- 229 (394)
|.|.+.|++|+.+.|.+++|+|++|+. +++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 2qzx_A 78 --------------TRFDIKYGDGSYAKGKLYKDTVGIGGV-----SVRDQLFANVWSTS-----ARKGILGIGFQSGEA 133 (342)
T ss_dssp --------------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEEC-----SSSCEEECSCGGGCS
T ss_pred --------------CcEEEEeCCCCeEEEEEEEEEEEECCE-----EecceEEEEEEecC-----CCcCEEEEccccccC
Confidence 999999999998779999999999986 89999999999864 5789999999764
Q ss_pred ------chhhhh---hhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEecc
Q 016180 230 ------SLISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV 296 (394)
Q Consensus 230 ------sl~~ql---~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 296 (394)
+++.|| +.+.+++||+||.+.+. |+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+ .
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~-~ 210 (342)
T 2qzx_A 134 TEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGS-LVDLPIT-SEKKLTVGLRSVNVRGRNV-D 210 (342)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSC-CEEEECC-CSSSCEEEEEEEEETTEEE-E
T ss_pred CCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecc-eEEEecc-CCceEEEEEeEEEECCEec-C
Confidence 344444 45678999999987533 9999999 5677775 9999999 7779999999999999887 3
Q ss_pred CCCcEEEcC-------------------CCc----cccccccccccCCCCCeEEEEE-eCcEEEeccceeEEEeC-----
Q 016180 297 STPDIVIDS-------------------DPT----GSLELCYSFNSLSQVPEVTIHF-RGADVKLSRSNFFVKVS----- 347 (394)
Q Consensus 297 ~~~~~iiDs-------------------~~~----~~~~~c~~~~~~~~~P~i~f~f-~g~~~~l~~~~~~~~~~----- 347 (394)
....+|||| ... ......|..+|. .+|+|+|+| +|++++||+++|+++..
T Consensus 211 ~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~~C~-~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~ 289 (342)
T 2qzx_A 211 ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVADCK-TSGTIDFQFGNNLKISVPVSEFLFQTYYTSGK 289 (342)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEECTT-CCCEEEEEETTTEEEEEEGGGGEECCBCTTSC
T ss_pred CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEEECC-CCCcEEEEECCCcEEEEcHHHhcccccccCCC
Confidence 346799999 110 001113334454 489999999 57999999999998742
Q ss_pred CceEEEE-EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 348 EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 348 ~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
.+..|++ |.+. +.||||++|||++|+|||++++|||||+++|.+
T Consensus 290 ~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 290 PFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp BCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 2357998 7765 579999999999999999999999999999974
No 21
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.9e-52 Score=401.73 Aligned_cols=276 Identities=21% Similarity=0.387 Sum_probs=229.5
Q ss_pred cccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEe-----cCCCCCCCCCCCCCCCCCCCCCCcccccCCCCcccc
Q 016180 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQ-----CEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCA 154 (394)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~-----~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~ 154 (394)
..+++...+..|+++|.||||||++.|+|||||+++||+ |.+|. .|. .++.|||++|+||+..+
T Consensus 3 i~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~--~C~--~~~~y~~~~SsT~~~~~------- 71 (339)
T 3fv3_A 3 ISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV--DCK--SSGTFTPSSSSSYKNLG------- 71 (339)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC--CTT--TTCCBCGGGCTTCEEEE-------
T ss_pred eeeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC--CCC--CCCcCCCccCcceeeCC-------
Confidence 355677778899999999999999999999999999998 55554 784 57999999999999987
Q ss_pred CCCCCCCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCCCCCcceeeecCCCCCc----
Q 016180 155 SLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDIS---- 230 (394)
Q Consensus 155 ~~~~~~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~s---- 230 (394)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+ .+||||||++.++
T Consensus 72 -----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~-----~~GilGLg~~~~~~~~~ 130 (339)
T 3fv3_A 72 -----------AAFTIRYGDGSTSQGTWGKDTVTINGV-----SITGQQIADVTQTSV-----DQGILGIGYTSNEAVYD 130 (339)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS-----SSCEEECSCGGGCCCBC
T ss_pred -----------ceEEEEECCCceEEEEEEEEEEEECCE-----EECceEEEEEEecCC-----CceeEEecCcccccccc
Confidence 999999999987789999999999987 999999999998753 5899999997653
Q ss_pred ------------hhhhh---hhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEcc
Q 016180 231 ------------LISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGN 291 (394)
Q Consensus 231 ------------l~~ql---~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~ 291 (394)
++.|| +.+.+++||+||.+.+. |+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|++
T Consensus 131 ~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g 208 (339)
T 3fv3_A 131 TSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGK-LVAEQVT-SSQALTISLASVNLKG 208 (339)
T ss_dssp TTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSC-CEEEEBC-CSSSCEEEEEEEEESS
T ss_pred ccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecc-eEEEecc-cCccEEEEEEEEEECC
Confidence 34444 45678999999988643 9999999 5677776 9999999 7779999999999999
Q ss_pred EEeccCCCcEEEcC-------------------CC-ccc---cccccccccCC-CCCeEEEEEe-CcEEEeccceeEEEe
Q 016180 292 QRLGVSTPDIVIDS-------------------DP-TGS---LELCYSFNSLS-QVPEVTIHFR-GADVKLSRSNFFVKV 346 (394)
Q Consensus 292 ~~~~~~~~~~iiDs-------------------~~-~~~---~~~c~~~~~~~-~~P~i~f~f~-g~~~~l~~~~~~~~~ 346 (394)
+.+. ....+|||| .. ... ....|..+|.. .+|+|+|+|+ |++++||+++|+++.
T Consensus 209 ~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~p~i~f~f~~g~~~~v~~~~~~~~~ 287 (339)
T 3fv3_A 209 SSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYVYQN 287 (339)
T ss_dssp CEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEECTTCCCCSEEEEEETTSCEEEEEGGGGEEEC
T ss_pred Eeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEecCCCCCCcEEEEECCCCEEEECHHHheeeC
Confidence 8873 346799999 10 000 01122223432 6899999995 799999999999886
Q ss_pred CCceEEEE-EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 347 SEDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 347 ~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
.+ ..|+. |.+ .+.||||++|||++|+|||++++|||||+++|++
T Consensus 288 ~~-~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 288 GD-GTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp SS-SCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CC-CeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 44 46866 887 4689999999999999999999999999999974
No 22
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.9e-52 Score=411.82 Aligned_cols=294 Identities=21% Similarity=0.386 Sum_probs=233.6
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCC------
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ------ 158 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~------ 158 (394)
+..+++|+++|.||||||+|.|+|||||+++||+|.+| .+|+||+.+.|.++.|.....
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~---------------~~Sst~~~~~C~s~~C~~~~~~~c~~c 81 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ---------------YSSKTYQAPFCHSTQCSRANTHQCLSC 81 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC---------------CCCSSCBCCCTTBHHHHHTTCCCEEEC
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC---------------CCCCCCCccCCCCccccCccccCcccc
Confidence 34688999999999999999999999999999998754 379999999999999975432
Q ss_pred -----CCCCCCCceeeEecC-CCCeeeeEEEEEEEEecCCCCCc------ccCCceEEEeEeecCCC-C-CCCcceeeec
Q 016180 159 -----KSCSGVNCQYSVSYG-DGSFSNGNLATETVTLGSTTGQA------VALPGITFGCGTNNGGL-F-NSKTTGIVGL 224 (394)
Q Consensus 159 -----~~c~~~~~~~~~~Yg-~gs~~~G~~~~D~v~~g~~~~~~------~~~~~~~fg~~~~~~~~-~-~~~~~GIlGL 224 (394)
..|....|.|.+.|+ +|+.+.|.+++|+|+|++.++.. +.++++.|||+...... + ...++|||||
T Consensus 82 ~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGL 161 (403)
T 3aup_A 82 PAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGL 161 (403)
T ss_dssp SSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEEC
T ss_pred CCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEEC
Confidence 235445799999998 78878899999999999854332 58899999999987543 3 4678999999
Q ss_pred CCCCCchhhhhhh--ccCCceEEeecCCC--CceEEeCCC-Ccc--C-C----CCeeeeecc-CCCCceEEEEEEEEEcc
Q 016180 225 GGGDISLISQMRT--TIAGKFSYCLVPVS--STKINFGTN-GIV--S-G----PGVVSTPLT-KAKTFYVLTIDAISVGN 291 (394)
Q Consensus 225 g~~~~sl~~ql~~--~~~~~Fs~~l~~~~--~g~l~fGg~-~~~--~-g----~~~~~~p~~-~~~~~w~v~l~~i~v~~ 291 (394)
|++.+++++|++. +.+++||+||.+.. .|+|+|||+ +++ . | ..+.|+|++ +...+|+|+|++|+|++
T Consensus 162 g~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~g 241 (403)
T 3aup_A 162 GHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQ 241 (403)
T ss_dssp SSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEETT
T ss_pred CCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCCCcceEEEEEEEECC
Confidence 9999999998754 56799999998852 299999992 233 3 3 259999999 33479999999999999
Q ss_pred EEe-cc----------CCCcEEEcC---------------------C-Cc-------cccccccccccCCCCCeEEEEEe
Q 016180 292 QRL-GV----------STPDIVIDS---------------------D-PT-------GSLELCYSFNSLSQVPEVTIHFR 331 (394)
Q Consensus 292 ~~~-~~----------~~~~~iiDs---------------------~-~~-------~~~~~c~~~~~~~~~P~i~f~f~ 331 (394)
+.+ .. +..++|||| . .. .....|+.......+|+|+|+|+
T Consensus 242 ~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i~f~f~ 321 (403)
T 3aup_A 242 HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMD 321 (403)
T ss_dssp EEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCEEEEES
T ss_pred EEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcEEEEEc
Confidence 876 21 134699999 0 10 12335664322226899999999
Q ss_pred Cc---EEEeccceeEEEeCCceEEEEEEcCC---CCcceechhhhceeEEEEECCCCEEEE-------eeCCCCC
Q 016180 332 GA---DVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSF-------KPTDCTK 393 (394)
Q Consensus 332 g~---~~~l~~~~~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~y~vfD~~~~rigf-------a~~~C~~ 393 (394)
|. +|+||+++|+++..++..|++|++.+ .+.||||+.|||++|+|||++++|||| ++++|++
T Consensus 322 g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~ 396 (403)
T 3aup_A 322 KPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCAD 396 (403)
T ss_dssp STTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGGG
T ss_pred CCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCCccc
Confidence 84 99999999999876567899988764 258999999999999999999999999 7888865
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.5e-52 Score=402.59 Aligned_cols=278 Identities=21% Similarity=0.397 Sum_probs=228.0
Q ss_pred ccccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCC--CC-------CCCCCCCCCCCCCCCCCCcccccCCCCc
Q 016180 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEP--CP-------PSQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (394)
Q Consensus 81 ~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~--c~-------~~~C~~~~~~~y~p~~SsT~~~~~c~~~ 151 (394)
.+++...++.|+++|.||||||++.|++||||+++||+|.. |. ...| ..++.|||++|+|++..+
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 3pvk_A 4 PVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC--KQKGTYDPSGSSASQDLN---- 77 (342)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred ceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC--CCCCcCCCccCcceeecC----
Confidence 45566778999999999999999999999999999998653 52 2356 467899999999999987
Q ss_pred cccCCCCCCCCCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCCCCCcceeeecCCCCC--
Q 016180 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (394)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~-- 229 (394)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++... ..+||||||++.+
T Consensus 78 --------------~~~~i~Yg~gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 3pvk_A 78 --------------TPFKIGYGDGSSSQGTLYKDTVGFGGV-----SIKNQVLADVDSTS-----IDQGILGVGYKTNEA 133 (342)
T ss_dssp --------------EEEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGCS
T ss_pred --------------CeEEEEecCCCeEEEEEEEEEEEECCE-----EecceEEEEEEccC-----CCccEEEecCccccc
Confidence 999999999997779999999999987 99999999998864 5789999999864
Q ss_pred -----chhhhh---hhccCCceEEeecCCCC--ceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccC
Q 016180 230 -----SLISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVS 297 (394)
Q Consensus 230 -----sl~~ql---~~~~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 297 (394)
+++.|| +.+.+++||+||.+.+. |+|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+...
T Consensus 134 ~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~ 211 (342)
T 3pvk_A 134 GGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGS-LIALPVT-SDRELRISLGSVEVSGKTINTD 211 (342)
T ss_dssp SCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSC-CEEEECC-CSSSCEEEEEEEEETTEEEEEE
T ss_pred cccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeee-eEEeecC-ccceEEEEEeEEEECCEEecCC
Confidence 344443 55678999999987643 9999999 5677776 9999999 7779999999999999987544
Q ss_pred CCcEEEcC-------------------CC----ccccccccccccCCCCCeEEEEEe-CcEEEeccceeEEEeC--Cc--
Q 016180 298 TPDIVIDS-------------------DP----TGSLELCYSFNSLSQVPEVTIHFR-GADVKLSRSNFFVKVS--ED-- 349 (394)
Q Consensus 298 ~~~~iiDs-------------------~~----~~~~~~c~~~~~~~~~P~i~f~f~-g~~~~l~~~~~~~~~~--~~-- 349 (394)
...+|||| .. ......+|..+|. ..|+|+|+|+ |.+++||+++|+++.. ++
T Consensus 212 ~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~-~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~ 290 (342)
T 3pvk_A 212 NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDCN-LSGDVVFNFSKNAKISVPASEFAASLQGDDGQP 290 (342)
T ss_dssp EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEECSC-CCSEEEEEESTTCEEEEEGGGGEEC--------
T ss_pred CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEecC-CCCceEEEECCCCEEEEcHHHheeeccccCCCc
Confidence 57899999 00 0000113334444 4699999998 7999999999998732 22
Q ss_pred -eEEEE-EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 350 -IVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 350 -~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
..|+. |.+. +.||||++|||++|+|||++++|||||+++|++
T Consensus 291 ~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 291 YDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp --CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred CCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 67988 7764 789999999999999999999999999999974
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2e-52 Score=401.10 Aligned_cols=272 Identities=17% Similarity=0.237 Sum_probs=229.3
Q ss_pred cccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 016180 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (394)
Q Consensus 84 ~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~ 163 (394)
.++.+..|+++|.|| +|++.|+|||||+++||+|..|....|....++.|||++| ||+..+
T Consensus 12 ~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~---------------- 72 (330)
T 1yg9_A 12 HVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG---------------- 72 (330)
T ss_dssp EEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE----------------
T ss_pred ecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC----------------
Confidence 345688999999999 8999999999999999999999755684456799999999 999876
Q ss_pred CCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCC-CCCcceeeecCCCCCc-------hhhhh
Q 016180 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS-------LISQM 235 (394)
Q Consensus 164 ~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GIlGLg~~~~s-------l~~ql 235 (394)
+.|.+.|++|+. .|.+++|+|++|+. +++++.|||++.....| ...++||||||++.++ ++.+|
T Consensus 73 --~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l 144 (330)
T 1yg9_A 73 --NVQVKFFDTGSA-VGRGIEDSLTISQL-----TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLENF 144 (330)
T ss_dssp --EEEEEETTTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHH
T ss_pred --CEEEEEECCceE-EEEEEEEEEEECCE-----EEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHHH
Confidence 899999999988 69999999999987 89999999999984445 5678999999998876 33333
Q ss_pred ---hhccCCceEEeecCCC----CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC-
Q 016180 236 ---RTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS- 305 (394)
Q Consensus 236 ---~~~~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs- 305 (394)
+.+ +++||+||.+.. .|+|+||| .+++.|+ +.|+|+. ...||.|+|++|+|+++.+......+|+||
T Consensus 145 ~~qg~i-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSG 221 (330)
T 1yg9_A 145 VEENLI-APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGE-FTYVPLV-GDDSWKFRLDGVKIGDTTVAPAGTQAIIDTS 221 (330)
T ss_dssp HHTTSS-CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEE-EEEEEBS-CTTSCCEECSEEEETTEEEECTTCEEEECTT
T ss_pred HhcCCC-CceEEEEEcCCCCCCCCCEEEECCcCHHHccCc-eEEEECC-CCCEEEEEeCeEEECCEEEcCCCcEEEEecC
Confidence 557 999999998862 29999999 3455565 9999999 889999999999999988755667899999
Q ss_pred ------------------CC-----c--cc-cccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcC
Q 016180 306 ------------------DP-----T--GS-LELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGI 358 (394)
Q Consensus 306 ------------------~~-----~--~~-~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~ 358 (394)
.. . .+ ..+|+... .+|+|+|+|+|++++||+++|+++. +..|+. |++.
T Consensus 222 Ts~~~lP~~~~~~l~~~~~~~~~~~g~~~~~~~~C~~~~---~~p~i~f~fgg~~~~l~~~~y~~~~--~~~C~~~i~~~ 296 (330)
T 1yg9_A 222 KAIIVGPKAYVNPINEAIGCVVEKTTTRRICKLDCSKIP---SLPDVTFVINGRNFNISSQYYIQQN--GNLCYSGFQPC 296 (330)
T ss_dssp CSSEEEEHHHHHHHHHHHTCEEEECSSCEEEEECGGGGG---GSCCEEEEETTEEEEECHHHHEEEE--TTEEEESEEEE
T ss_pred CccccCCHHHHHHHHHHhCCcccCCCceEEEEEECCCcc---ccCcEEEEECCEEEEECHHHhcccC--CCcEEEEEEeC
Confidence 11 1 12 34455432 6899999999999999999999987 468997 8764
Q ss_pred C-CCcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 359 T-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 359 ~-~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+ .+.||||++|||++|+|||++++|||||+++
T Consensus 297 ~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 297 GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 3 5689999999999999999999999999975
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-52 Score=398.33 Aligned_cols=277 Identities=18% Similarity=0.317 Sum_probs=228.8
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
...+..|+++|.|| +|++.|+|||||+++||+|.+|. .|..+.++.|||++|+ ++...
T Consensus 10 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~----------------- 67 (325)
T 1ibq_A 10 QNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP--SSEQTGHDLYTPSSSA-TKLSG----------------- 67 (325)
T ss_dssp CTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC--HHHHTTSCCCBCCSSC-EECTT-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC--ccccCCCCCCCchhcC-CccCC-----------------
Confidence 45788999999999 89999999999999999999998 6655778999999999 65444
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCC--CCCcceeeecCCCCCc---------hhh
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LIS 233 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~s---------l~~ 233 (394)
|.|.+.|++|+.+.|.+++|+|++|+. +++++.|||++...+.| ....+||||||++.++ ++.
T Consensus 68 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 141 (325)
T 1ibq_A 68 -YSWDISYGDGSSASGDVYRDTVTVGGV-----TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFD 141 (325)
T ss_dssp -CBEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CEEEEEeCCCCEEEEEEEEeEEEECCE-----EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHH
Confidence 999999999997779999999999987 89999999999987654 3678999999997655 345
Q ss_pred hhhh-ccCCceEEeecCCCCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC-----
Q 016180 234 QMRT-TIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS----- 305 (394)
Q Consensus 234 ql~~-~~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs----- 305 (394)
||.. +.+++||+||.+...|+|+||| .+++.|+ +.|+|+.+...||.|+|++|+|+++.+......+|+||
T Consensus 142 ~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 220 (325)
T 1ibq_A 142 TVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGS-ITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLI 220 (325)
T ss_dssp HHGGGSSSSEEEEEEETTEEEEEEESSCCGGGBSSC-CEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSE
T ss_pred HHHHhcCCcEEEEEecCCCCceEEECCcChhhccCc-eEEEEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCcE
Confidence 5533 5689999999875449999999 3466665 99999973467999999999999987755667899999
Q ss_pred -----------CC--cc---ccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEEE-EEcCC-CCccee
Q 016180 306 -----------DP--TG---SLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-NSVPIY 365 (394)
Q Consensus 306 -----------~~--~~---~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~-~~~~il 365 (394)
.. .. ....-|..+|...+|+|+|+|+|++++||+++|+++..+ ...|++ |++.+ .+.|||
T Consensus 221 ~lP~~~~~~i~~~i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iL 300 (325)
T 1ibq_A 221 LLDDEIVSAYYEQVSGAQESYEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSIL 300 (325)
T ss_dssp EECHHHHHHHHTTSTTCBCCSSSSSCEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECTTTCSEEE
T ss_pred eCCHHHHHHHHHhCCCceEcCcCCeEEEEcCCCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCCCCCceEE
Confidence 00 00 011123334555789999999999999999999987633 368998 87764 578999
Q ss_pred chhhhceeEEEEECCCCEEEEeeCC
Q 016180 366 GNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 366 G~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
|++|||++|+|||++++|||||+++
T Consensus 301 G~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 301 GDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp CHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ChHHhcCEEEEEECCCCEEEeeeCC
Confidence 9999999999999999999999974
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.1e-52 Score=398.61 Aligned_cols=276 Identities=18% Similarity=0.310 Sum_probs=228.4
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
...+..|+++|.|| ||++.|+|||||+++||+|.+|. .|.++.++.|||++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~----------------- 68 (323)
T 1izd_A 11 TSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP--SSERSGHDYYTPGSSA-QKIDG----------------- 68 (323)
T ss_dssp CGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTCCCBCCCTTC-EEEEE-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC--cccccCCCCCCccccC-CccCC-----------------
Confidence 34678899999999 89999999999999999999998 6655778999999999 66544
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCC--CCCcceeeecCCCCCch---------hh
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDISL---------IS 233 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~sl---------~~ 233 (394)
|.|.+.|++|+.+.|.+++|+|++++. +++++.|||++...+.| ....+||||||++.++. +.
T Consensus 69 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~ 142 (323)
T 1izd_A 69 -ATWSISYGDGSSASGDVYKDKVTVGGV-----SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFD 142 (323)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEcCCCCeEEEEEEEEEEEECCE-----EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHH
Confidence 999999999997779999999999987 89999999999987654 36789999999976553 34
Q ss_pred hhh-hccCCceEEeecCCCCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC-----
Q 016180 234 QMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS----- 305 (394)
Q Consensus 234 ql~-~~~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs----- 305 (394)
+|. .+.+++||+||.+...|+|+||| .+++.|+ +.|+|+.+...||.|+|++|+|++ .+......+|+||
T Consensus 143 ~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~~ 220 (323)
T 1izd_A 143 NVKSSLSEPIFAVALKHNAPGVYDFGYTDSSKYTGS-ITYTDVDNSQGFWGFTADGYSIGS-DSSSDSITGIADTGTTLL 220 (323)
T ss_dssp HHGGGSSSSEEEEECCTTSCEEEEESSCCTTSEEEE-EEEEECBCTTSSCEEEESEEEETT-EEECCCEEEEECTTCCSE
T ss_pred HHHHhccCcEEEEEccCCCCCEEEECCcCccccccc-eEEEECCCCCceEEEEECeEEECC-cccCCCceEEEeCCCcce
Confidence 443 25679999999876459999999 3456665 999999734679999999999999 6656667899999
Q ss_pred -----------CC--ccc---cccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCCceEEEE-EEcCC-CCcceech
Q 016180 306 -----------DP--TGS---LELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT-NSVPIYGN 367 (394)
Q Consensus 306 -----------~~--~~~---~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~-~~~~ilG~ 367 (394)
.. ... ....|..+|...+|+|+|+|+|++++||+++|+++..++..|++ |++.+ .+.||||+
T Consensus 221 ~lp~~~~~~i~~~i~ga~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~~i~~~~~~~~~IlG~ 300 (323)
T 1izd_A 221 LLDDSIVDAYYEQVNGASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNSGIGFSIFGD 300 (323)
T ss_dssp EECHHHHHHHHTTSTTCEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEECSTTEEEESEEECTTTSSEEECH
T ss_pred eCCHHHHHHHHHhCCCcEEcCcCCEEEEECCCCCceEEEEECCEEEecCHHHeEEecCCCCeEEEEEEcCCCCCcEEECh
Confidence 00 000 11223335555799999999999999999999988655678998 88764 57899999
Q ss_pred hhhceeEEEEECCCCEEEEeeCC
Q 016180 368 IMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 368 ~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+|||++|+|||++++|||||+++
T Consensus 301 ~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 301 VFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp HHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHhcCEEEEEECCCCEEEEeeCC
Confidence 99999999999999999999974
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=5.5e-52 Score=396.98 Aligned_cols=275 Identities=20% Similarity=0.360 Sum_probs=226.4
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~ 164 (394)
...+..|+++|.|| ||++.|+|||||+++||+|.+|. .|..+.++.|||++|+ ++...
T Consensus 11 ~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~----------------- 68 (323)
T 1bxo_A 11 TANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP--ASQQSGHSVYNPSATG-KELSG----------------- 68 (323)
T ss_dssp CGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCHHHHC-EEEEE-----------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC--chhccCCCCCCcccCC-cccCC-----------------
Confidence 44678999999999 89999999999999999999998 6655778999999999 76554
Q ss_pred CceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCC--CCCcceeeecCCCCCch---------hh
Q 016180 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDISL---------IS 233 (394)
Q Consensus 165 ~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~sl---------~~ 233 (394)
|.|.+.|++|+.+.|.+++|+|++|+. +++++.|||++..++.| ....+||||||++.++. +.
T Consensus 69 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~ 142 (323)
T 1bxo_A 69 -YTWSISYGDGSSASGNVFTDSVTVGGV-----TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFD 142 (323)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEeCCCCeEEEEEEEEEEEECCE-----EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHH
Confidence 999999999997779999999999987 89999999999987654 36789999999976543 34
Q ss_pred hhh-hccCCceEEeecCCCCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEeccCCCcEEEcC-----
Q 016180 234 QMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS----- 305 (394)
Q Consensus 234 ql~-~~~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs----- 305 (394)
+|. .+.+++||+||.+...|+|+||| .+++.|+ +.|+|+.+...||.|+|++|+|++ +......+|+||
T Consensus 143 ~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs~~ 219 (323)
T 1bxo_A 143 TVKSSLAQPLFAVALKHQQPGVYDFGFIDSSKYTGS-LTYTGVDNSQGFWSFNVDSYTAGS--QSGDGFSGIADTGTTLL 219 (323)
T ss_dssp HHGGGBSSSEEEEECCSSSCEEEEESSCCGGGBSSC-CEEEECBCTTSSCEEEEEEEEETT--EEEEEEEEEECTTCSSE
T ss_pred HHHHhcCCcEEEEEEeCCCCceEEEeCcChhhccCc-eEEEECCCCCCeEEEEEeeEEECC--ccCCCceEEEeCCCCce
Confidence 443 25679999999875459999999 3456665 999999734679999999999999 335567899999
Q ss_pred -----------CC--ccc---cccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC-ceEEEE-EEcCC-CCcceec
Q 016180 306 -----------DP--TGS---LELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE-DIVCSV-FKGIT-NSVPIYG 366 (394)
Q Consensus 306 -----------~~--~~~---~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~-~~~C~~-i~~~~-~~~~ilG 366 (394)
.. ... ...-|..+|...+|+|+|+|+|++++||+++|+++..+ +..|++ |++.+ .+.||||
T Consensus 220 ~lP~~~~~~l~~~i~~a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~~i~~~~~~~~~ILG 299 (323)
T 1bxo_A 220 LLDDSVVSQYYSQVSGAQQDSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFG 299 (323)
T ss_dssp EECHHHHHHHHTTSTTCEEETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEEECSSSSCEEESEEECTTCSSEEEC
T ss_pred eCCHHHHHHHHHhCCCceEcCcCCEEEEECCCCCceEEEEECCEEEEECHHHeEEeccCCCCeEEEEEECCCCCCcEEEC
Confidence 00 000 11123335555799999999999999999999987643 368998 88764 5689999
Q ss_pred hhhhceeEEEEECCCCEEEEeeCC
Q 016180 367 NIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 367 ~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
++|||++|+|||++++|||||+++
T Consensus 300 ~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 300 DIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp HHHHTTEEEEEETTTTEEEEEEBC
T ss_pred hHHHcCEEEEEECCCCEEEEecCC
Confidence 999999999999999999999974
No 28
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.4e-49 Score=397.33 Aligned_cols=273 Identities=21% Similarity=0.399 Sum_probs=220.2
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCCc
Q 016180 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNC 166 (394)
Q Consensus 87 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~~~ 166 (394)
.+..|+++|.||||||+|+|+|||||+++||+|.+| | ..++.|||++|+||+..+ |
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c----c--~~~~~y~~~~SsT~~~~~------------------~ 127 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----P--FLHRYYQRQLSSTYRDLR------------------K 127 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----T--TCSCCCCGGGCTTCEEEE------------------E
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc----c--ccCCcccCCCCCCcccCC------------------c
Confidence 456899999999999999999999999999999977 3 467899999999999987 9
Q ss_pred eeeEecCCCCeeeeEEEEEEEEecCCCCCcccCC-ceEEEeEeecCCCC--CCCcceeeecCCCCCc------------h
Q 016180 167 QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS------------L 231 (394)
Q Consensus 167 ~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~s------------l 231 (394)
.|.+.|++|+. .|.+++|+|+|++.. .+. .+.|+++....+.| ...++||||||++.++ |
T Consensus 128 ~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 128 GVYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred cEEEEeCCeEE-EEEEEEEEEEECCCc----ceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 99999999998 599999999998521 222 36788888776655 3678999999997654 3
Q ss_pred hhhhhhccCCceEEeecCC------------CCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEecc-
Q 016180 232 ISQMRTTIAGKFSYCLVPV------------SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV- 296 (394)
Q Consensus 232 ~~ql~~~~~~~Fs~~l~~~------------~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~- 296 (394)
++| +.+. ++||+||.+. ..|+|+||| .+++.|+ +.|+|+. ...||.|+|++|+|+++.+..
T Consensus 203 ~~q-~~i~-~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~ 278 (455)
T 3lpj_A 203 VKQ-THVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGS-LWYTPIR-REWYYEVIIVRVEINGQDLKMD 278 (455)
T ss_dssp HHH-SCCC-SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEE-EEEEECC-SBTTBBCCEEEEEETTEECCCC
T ss_pred HHc-cCCC-ceeEEEeccccccccccccccCCCceEEECCcCcccccCc-eEEEecC-CCceeEEEEeEEEECCEEcccc
Confidence 334 4444 8999999752 129999999 3456665 9999999 788999999999999998731
Q ss_pred ----CCCcEEEcC----------------------CC---------ccccccccccccC--CCCCeEEEEEeCc------
Q 016180 297 ----STPDIVIDS----------------------DP---------TGSLELCYSFNSL--SQVPEVTIHFRGA------ 333 (394)
Q Consensus 297 ----~~~~~iiDs----------------------~~---------~~~~~~c~~~~~~--~~~P~i~f~f~g~------ 333 (394)
....+|||| .. ..+...|+..... ..+|+|+|+|+|.
T Consensus 279 ~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~ 358 (455)
T 3lpj_A 279 CKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSF 358 (455)
T ss_dssp GGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEE
T ss_pred ccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceE
Confidence 256899999 00 1124678765311 1489999999986
Q ss_pred EEEeccceeEEEeCCc----eEEEEE--EcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 334 DVKLSRSNFFVKVSED----IVCSVF--KGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 334 ~~~l~~~~~~~~~~~~----~~C~~i--~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
+|+|++++|+++..+. ..|++| .+. .+.||||++|||++|+|||++++|||||+++|..
T Consensus 359 ~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 423 (455)
T 3lpj_A 359 RITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 423 (455)
T ss_dssp EEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred EEEECHHHheEeccCCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEeccccc
Confidence 4999999999987542 589873 332 5789999999999999999999999999999975
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-49 Score=386.50 Aligned_cols=274 Identities=23% Similarity=0.393 Sum_probs=219.7
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCC
Q 016180 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (394)
Q Consensus 86 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~~ 165 (394)
..+..|+++|.||||+|++.|+|||||+++||+|.+|. .| ++.|||++|+||+..+
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~~----~~~f~~~~SsT~~~~~------------------ 65 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS--YI----DTYFDTERSSTYRSKG------------------ 65 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT--TB----SCCCCGGGCTTCEEEE------------------
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC--cc----ccCcccccCccceeCC------------------
Confidence 34567999999999999999999999999999999887 45 5889999999999987
Q ss_pred ceeeEecCCCCeeeeEEEEEEEEecCCCCCcccC-CceEEEeEeecCCCC--CCCcceeeecCCCCCc------------
Q 016180 166 CQYSVSYGDGSFSNGNLATETVTLGSTTGQAVAL-PGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS------------ 230 (394)
Q Consensus 166 ~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~-~~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~s------------ 230 (394)
|.|.+.|++|+. .|.+++|+|+|++.. .. ..+.|++.....+.| ....+||||||++.++
T Consensus 66 ~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~ 140 (383)
T 2ewy_A 66 FDVTVKYTQGSW-TGFVGEDLVTIPKGF----NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDS 140 (383)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEEETTTE----EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred ceEEEEECCcEE-EEEEEEEEEEECCCc----cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHH
Confidence 999999999987 599999999998641 11 135688877655544 3578999999997653
Q ss_pred hhhhhhhccCCceEEeecCC---------CCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEecc---
Q 016180 231 LISQMRTTIAGKFSYCLVPV---------SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV--- 296 (394)
Q Consensus 231 l~~ql~~~~~~~Fs~~l~~~---------~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~--- 296 (394)
+++| +.+ +++||+||.+. ..|+|+||| .+++.|+ +.|+|+. ...||+|+|++|+|+++.+..
T Consensus 141 l~~q-~~i-~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~~~ 216 (383)
T 2ewy_A 141 LVTQ-ANI-PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGD-IWYTPIK-EEWYYQIEILKLEIGGQSLNLDCR 216 (383)
T ss_dssp HHHH-HTC-CSCEEEEECCC---------CCEEEEETSCCGGGCCSC-EEEEECS-SBTTBBCCEEEEEETTEECCCCTT
T ss_pred HHHc-cCC-CcceEEEeeccccccccCCCCCeEEEeCccchhhccCc-cEEEecC-CCceEEEEEEEEEECCEEcccccc
Confidence 4556 445 78999999641 129999999 3456665 9999999 778999999999999988721
Q ss_pred --CCCcEEEcC---------------------CCc----------cccccccccccC--CCCCeEEEEEeCc------EE
Q 016180 297 --STPDIVIDS---------------------DPT----------GSLELCYSFNSL--SQVPEVTIHFRGA------DV 335 (394)
Q Consensus 297 --~~~~~iiDs---------------------~~~----------~~~~~c~~~~~~--~~~P~i~f~f~g~------~~ 335 (394)
....+|||| ... .+...|+..... ..+|+|+|+|+|. ++
T Consensus 217 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 217 EYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp TTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEE
T ss_pred ccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEE
Confidence 146899999 100 124578765321 2589999999974 79
Q ss_pred EeccceeEEEeC---CceEEEE--EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 336 KLSRSNFFVKVS---EDIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 336 ~l~~~~~~~~~~---~~~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
+||+++|+++.. .+..|++ +.+. .+.||||++|||++|+|||++++|||||+++|..
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred EEChHHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 999999998864 3568985 4544 5689999999999999999999999999999963
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=8.4e-49 Score=385.08 Aligned_cols=272 Identities=21% Similarity=0.413 Sum_probs=218.7
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCCc
Q 016180 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNC 166 (394)
Q Consensus 87 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~~~ 166 (394)
.+..|+++|.||||+|++.|+|||||+++||+|.+|. . .++.|||++|+||+... |
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~--~----~~~~y~~~~SsT~~~~~------------------~ 74 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP--F----LHRYYQRQLSSTYRDLR------------------K 74 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT--T----CSCCCCGGGCTTCEEEE------------------E
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc--c----ccCCcCcccCCCceeCC------------------c
Confidence 4678999999999999999999999999999999886 3 46899999999999987 9
Q ss_pred eeeEecCCCCeeeeEEEEEEEEecC-CCCCcccCC-ceEEEeEeecCCCC--CCCcceeeecCCCCCc------------
Q 016180 167 QYSVSYGDGSFSNGNLATETVTLGS-TTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS------------ 230 (394)
Q Consensus 167 ~~~~~Yg~gs~~~G~~~~D~v~~g~-~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GIlGLg~~~~s------------ 230 (394)
.|.+.|++|+. .|.+++|+|+|++ . .++ .+.|++.....+.| ....+||||||++.++
T Consensus 75 ~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~-----~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~ 148 (395)
T 2qp8_A 75 GVYVPYTQGKW-EGELGTDLVSIPHGP-----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDS 148 (395)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC-----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred eEEEEECCcEE-EEEEEeEEEEECCCC-----CceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHH
Confidence 99999999987 5999999999984 3 333 36678777665545 3578999999997653
Q ss_pred hhhhhhhccCCceEEeecCC------------CCceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEecc
Q 016180 231 LISQMRTTIAGKFSYCLVPV------------SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV 296 (394)
Q Consensus 231 l~~ql~~~~~~~Fs~~l~~~------------~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 296 (394)
|++| +.+. ++||+||.+. ..|+|+||| .+++.|+ +.|+|+. ...||.|+|++|+|+++.+..
T Consensus 149 l~~q-~~i~-~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~~~ 224 (395)
T 2qp8_A 149 LVKQ-THVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGS-LWYTPIR-REWYYEVIIVRVEINGQDLKM 224 (395)
T ss_dssp HHHH-SCCC-SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEE-EEEEECC-SBTTBBCCEEEEEETTEECCC
T ss_pred HHHc-cCCc-ceEEEEeccccccccccccccCCCcEEEECCcCcccccCc-eEEeccC-CCceEEEEEEEEEECCEEccc
Confidence 4445 3443 8999999752 239999999 3456665 9999999 778999999999999988621
Q ss_pred -----CCCcEEEcC-----------------------CCc--------cccccccccccC--CCCCeEEEEEeCc-----
Q 016180 297 -----STPDIVIDS-----------------------DPT--------GSLELCYSFNSL--SQVPEVTIHFRGA----- 333 (394)
Q Consensus 297 -----~~~~~iiDs-----------------------~~~--------~~~~~c~~~~~~--~~~P~i~f~f~g~----- 333 (394)
....+|||| ... .....|+..... ..+|+|+|+|+|.
T Consensus 225 ~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~ 304 (395)
T 2qp8_A 225 DCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQS 304 (395)
T ss_dssp CGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEE
T ss_pred CccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEEccCCCCce
Confidence 246899999 000 113578765321 1589999999985
Q ss_pred -EEEeccceeEEEeCC----ceEEEE--EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 334 -DVKLSRSNFFVKVSE----DIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 334 -~~~l~~~~~~~~~~~----~~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
+++|+|++|+++..+ ...|++ +.+. .+.||||++|||++|+|||++++|||||+++|..
T Consensus 305 ~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 305 FRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp EEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred EEEEECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 699999999998643 348974 6554 5689999999999999999999999999999985
No 31
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=7.1e-49 Score=386.52 Aligned_cols=274 Identities=20% Similarity=0.394 Sum_probs=218.3
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCCc
Q 016180 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNC 166 (394)
Q Consensus 87 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~~~~~ 166 (394)
.+..|+++|.||||||+++|+|||||+++||+|.+|. ..++.|||++|+||+... |
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~------~~~~~y~~~~SsT~~~~~------------------~ 81 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP------FLHRYYQRQLSSTYRDLR------------------K 81 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT------TCSCCCCGGGCTTCEEEE------------------E
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCCC------cccCCcCcccCcccccCC------------------C
Confidence 3468999999999999999999999999999999874 457899999999999987 9
Q ss_pred eeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCc-eEEEeEeecCCCC--CCCcceeeecCCCCCc--------hhhhh
Q 016180 167 QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPG-ITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------LISQM 235 (394)
Q Consensus 167 ~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~-~~fg~~~~~~~~~--~~~~~GIlGLg~~~~s--------l~~ql 235 (394)
.|.+.|++|+. .|.+++|+|+|++.. .++. +.|+++....+.| ...++||||||++.++ ++.+|
T Consensus 82 ~~~i~Yg~Gs~-~G~~~~D~v~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 82 GVYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEEECcEEE-EEEEEEEEEEECCcc----ccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 99999999997 599999999999521 3332 4578877766555 4678999999997654 22233
Q ss_pred ---hhccCCceEEeecCC----------C--CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEecc--
Q 016180 236 ---RTTIAGKFSYCLVPV----------S--STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV-- 296 (394)
Q Consensus 236 ---~~~~~~~Fs~~l~~~----------~--~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~-- 296 (394)
+.+. ++||+||.+. . .|+|+||| .+++.|+ +.|+|+. ...||.|+|++|+|+++.+..
T Consensus 157 ~~q~~i~-~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~ 233 (402)
T 3vf3_A 157 VKQTHVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGS-LWYTPIR-REWYYEVIIVRVEINGQDLKMDC 233 (402)
T ss_dssp HHHSCCC-SCEEEEECCCC-------------EEEEESSCCGGGEEEE-EEEEECS-SBTTBEECEEEEEETTEECCCCG
T ss_pred HHccCCc-cceEEEeecccccccccccccCCCCEEEeCCcCcccccCc-eEEEeCC-cCcEEEEEEeEEEECCEEecccc
Confidence 3444 8999999642 1 29999999 4456665 9999999 788999999999999998731
Q ss_pred ---CCCcEEEcC----------------------C----C-----ccccccccccccC--CCCCeEEEEEeCc------E
Q 016180 297 ---STPDIVIDS----------------------D----P-----TGSLELCYSFNSL--SQVPEVTIHFRGA------D 334 (394)
Q Consensus 297 ---~~~~~iiDs----------------------~----~-----~~~~~~c~~~~~~--~~~P~i~f~f~g~------~ 334 (394)
....+|||| . . ..+...|+..... ..+|+|+|+|+|. +
T Consensus 234 ~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 313 (402)
T 3vf3_A 234 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 313 (402)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred cccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEE
Confidence 256899999 0 0 0114578765321 1589999999985 4
Q ss_pred EEeccceeEEEeCCc----eEEEE--EEcCCCCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 335 VKLSRSNFFVKVSED----IVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 335 ~~l~~~~~~~~~~~~----~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
++|++++|+++..+. ..|++ +.+. .+.||||++|||++|+|||++++|||||+++|+.
T Consensus 314 ~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 314 ITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp EEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred EEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 999999999987542 48986 3333 5789999999999999999999999999999985
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=8.9e-49 Score=377.45 Aligned_cols=266 Identities=21% Similarity=0.379 Sum_probs=212.7
Q ss_pred cccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCC
Q 016180 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (394)
Q Consensus 82 ~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c 161 (394)
.++...+..|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~------------~~y~~s~Ss~~~~---------------- 56 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD------------KSYVKTSTSSATS---------------- 56 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS------------SCCCCCTTCEEEE----------------
T ss_pred EeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC------------CccCCcCCccccC----------------
Confidence 445555779999999999999999999999999999542 5799998886643
Q ss_pred CCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCCCCCCCcceeeecCCCCCch----------
Q 016180 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISL---------- 231 (394)
Q Consensus 162 ~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GIlGLg~~~~sl---------- 231 (394)
|.|.+.|++|+. .|.+++|+|+||+. +++++.|||++...+ | ...+||||||++.+++
T Consensus 57 ----~~~~i~Yg~Gs~-~G~~~~Dtv~~g~~-----~v~~~~fg~~~~~~~-~-~~~~GilGLg~~~~s~~~~~~~~~~~ 124 (340)
T 1wkr_A 57 ----DKVSVTYGSGSF-SGTEYTDTVTLGSL-----TIPKQSIGVASRDSG-F-DGVDGILGVGPVDLTVGTLSPHTSTS 124 (340)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEES-C-TTCSEEEECSCGGGGTTSEESCTTCC
T ss_pred ----ceEEEEECCcEE-EEEEEEEEEEECCE-----EEcceEEEEEEccCC-C-cCCCcEEECCcccccccccccccccc
Confidence 999999999985 59999999999986 999999999998765 5 4689999999976543
Q ss_pred ----hhhh---hhccCCceEEeecCCC-----CceEEeCC--CCccCCCCeeeeecc-C--CCCceEEEEEEEEEcc-EE
Q 016180 232 ----ISQM---RTTIAGKFSYCLVPVS-----STKINFGT--NGIVSGPGVVSTPLT-K--AKTFYVLTIDAISVGN-QR 293 (394)
Q Consensus 232 ----~~ql---~~~~~~~Fs~~l~~~~-----~g~l~fGg--~~~~~g~~~~~~p~~-~--~~~~w~v~l~~i~v~~-~~ 293 (394)
+.+| +.+.+++||+||.+.. .|+|+||| .+++.|+ +.|+|+. + ...||.|+ ++|+|++ +.
T Consensus 125 ~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~ 202 (340)
T 1wkr_A 125 IPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGS-ITYTPITSTSPASAYWGIN-QSIRYGSSTS 202 (340)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSC-CEEEECCSSTTGGGSSEEE-EEEEETTTEE
T ss_pred CCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccc-eEEEECccCCCCcceEEEE-eeEEECCCeE
Confidence 2222 4467899999998741 19999999 3456665 9999999 2 17899999 9999998 77
Q ss_pred eccCCCcEEEcCC-------------------C------ccccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeC-
Q 016180 294 LGVSTPDIVIDSD-------------------P------TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS- 347 (394)
Q Consensus 294 ~~~~~~~~iiDs~-------------------~------~~~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~- 347 (394)
+. ....+||||. . ..+..+|.... .+|+|+|+|+|.+++|+|++|+++..
T Consensus 203 l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~~g~~~~~C~~~~---~~p~i~f~f~g~~~~i~~~~yi~~~~~ 278 (340)
T 1wkr_A 203 IL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVADNNTGLLRLTTAQYA---NLQSLFFTIGGQTFELTANAQIWPRNL 278 (340)
T ss_dssp EE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEECTTTSSEEECHHHHH---TCCCEEEEETTEEEEECTGGGBCCGGG
T ss_pred cc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCCCCeEEeeccccc---cCCcEEEEECCEEEEEcHHHhcccccc
Confidence 63 3358999991 0 11223444322 78999999999999999999998653
Q ss_pred ------CceEEEE-EEcCC-----CCcceechhhhceeEEEEECCCCEEEEeeCCCCC
Q 016180 348 ------EDIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 393 (394)
Q Consensus 348 ------~~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~rigfa~~~C~~ 393 (394)
....|+. |.+.+ +..||||++|||++|+|||++++|||||+++|.+
T Consensus 279 ~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 279 NTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp GGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred ccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 1246765 76532 2469999999999999999999999999999975
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=9.7e-48 Score=375.61 Aligned_cols=281 Identities=23% Similarity=0.470 Sum_probs=217.5
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCC---CCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLN---QKSC 161 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~---~~~c 161 (394)
+..+.+|+++|+|||| |+|||||+++||+|.+|. +|+.+.|.++.|.... ...|
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~------------------~~~~~~C~s~~C~~~~~~~~~sc 66 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ------------------PPAEIPCSSPTCLLANAYPAPGC 66 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC------------------CCCCCBTTSHHHHHHHSSCCTTC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC------------------CCCccCCCCchhccccCCCCCCC
Confidence 4678899999999998 999999999999987542 2445666666664321 1234
Q ss_pred CC---------CCc-eeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCce----EEEeEeecCC-CCCCCcceeeecCC
Q 016180 162 SG---------VNC-QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGI----TFGCGTNNGG-LFNSKTTGIVGLGG 226 (394)
Q Consensus 162 ~~---------~~~-~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~----~fg~~~~~~~-~~~~~~~GIlGLg~ 226 (394)
.. ..| .|.+.|++|+.+.|.+++|+|++++.++. +.++++ .|||+..... .+...++||||||+
T Consensus 67 ~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~-~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~ 145 (381)
T 1t6e_X 67 PAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGS-KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLAN 145 (381)
T ss_dssp CCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSS-SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSS
T ss_pred CCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCC-ccccceeeeeEeecCcccccCCCCCCCceEEEeCC
Confidence 31 146 59999999998779999999999964321 255665 5699987632 22467899999999
Q ss_pred CCCchhhhhhh--ccCCceEEeecCCCCceEEeCCCCc----cCCCCeeeeecc-C-CCCceEEEEEEEEEccEEecc--
Q 016180 227 GDISLISQMRT--TIAGKFSYCLVPVSSTKINFGTNGI----VSGPGVVSTPLT-K-AKTFYVLTIDAISVGNQRLGV-- 296 (394)
Q Consensus 227 ~~~sl~~ql~~--~~~~~Fs~~l~~~~~g~l~fGg~~~----~~g~~~~~~p~~-~-~~~~w~v~l~~i~v~~~~~~~-- 296 (394)
+.+++++|+.. +.+++||+||.+...|+|+|||.+. +.++ +.|+|++ + ...+|.|+|++|+||++.+..
T Consensus 146 ~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~-l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~ 224 (381)
T 1t6e_X 146 SGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQS-MPYTPLVTKGGSPAHYISARSIVVGDTRVPVPE 224 (381)
T ss_dssp STTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTT-CCEEECBCCTTCCSCEECEEEEEETTEECCCCT
T ss_pred CcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCc-ceeeccccCCCCcceEEEEEEEEEcCEEecCCH
Confidence 99999998764 4589999999886449999999432 4554 9999999 3 235677999999999988731
Q ss_pred C---CCcEEEcC-----------------------C-------------C-ccccccccccccC------CCCCeEEEEE
Q 016180 297 S---TPDIVIDS-----------------------D-------------P-TGSLELCYSFNSL------SQVPEVTIHF 330 (394)
Q Consensus 297 ~---~~~~iiDs-----------------------~-------------~-~~~~~~c~~~~~~------~~~P~i~f~f 330 (394)
. .+++|||| . . ...++.|+..++. ..+|+|+|+|
T Consensus 225 ~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f 304 (381)
T 1t6e_X 225 GALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGL 304 (381)
T ss_dssp TCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEE
T ss_pred HHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEEEE
Confidence 1 36799999 1 0 1234679876542 2689999999
Q ss_pred eC-cEEEeccceeEEEeCCceEEEEEEcCCC--------CcceechhhhceeEEEEECCCCEEEEeeCC
Q 016180 331 RG-ADVKLSRSNFFVKVSEDIVCSVFKGITN--------SVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 390 (394)
Q Consensus 331 ~g-~~~~l~~~~~~~~~~~~~~C~~i~~~~~--------~~~ilG~~fl~~~y~vfD~~~~rigfa~~~ 390 (394)
+| ++|+||+++|+++..++..|++|++.+. +.||||+.|||++|+|||++++|||||+++
T Consensus 305 ~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 305 DGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp TTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 85 9999999999998766779999876542 589999999999999999999999999855
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-38 Score=291.19 Aligned_cols=196 Identities=26% Similarity=0.444 Sum_probs=166.4
Q ss_pred ccccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCC-CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCC
Q 016180 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (394)
Q Consensus 83 ~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~-~~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c 161 (394)
..++.+.+|+++|.||||+|++.|+|||||+++||+|..|. +..|. .++.|||++|+||+..+
T Consensus 7 l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~-------------- 70 (239)
T 1b5f_A 7 LTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKENG-------------- 70 (239)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEEEE--------------
T ss_pred eeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeeeCC--------------
Confidence 34567889999999999999999999999999999999996 23574 57899999999999887
Q ss_pred CCCCceeeEecCCCCeeeeEEEEEEEEecCCCCCcccCCceEEEeEeecCC-CC-CCCcceeeecCCCCCc------hhh
Q 016180 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------LIS 233 (394)
Q Consensus 162 ~~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GIlGLg~~~~s------l~~ 233 (394)
|.|.+.|++|+. .|.+++|+|++++. .++++.|||+....+ .| ...++||||||++.++ +++
T Consensus 71 ----~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~ 140 (239)
T 1b5f_A 71 ----TFGAIIYGTGSI-TGFFSQDSVTIGDL-----VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLN 140 (239)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHH
T ss_pred ----cEEEEEECCCcE-EEEEEEEEEEECCc-----EEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHHH
Confidence 899999999985 59999999999987 899999999998765 34 5678999999999887 445
Q ss_pred hhhhccCCceEEeecCCC----CceEEeCC--CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEec--cCCCcEEEcC
Q 016180 234 QMRTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG--VSTPDIVIDS 305 (394)
Q Consensus 234 ql~~~~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~--~~~~~~iiDs 305 (394)
| +.+.+++||+||.+.. .|+|+||| .+++.|+ +.|+|+. ...||.|+|++|+|+++.+. .....+||||
T Consensus 141 q-g~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDT 217 (239)
T 1b5f_A 141 Q-GLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGD-HTYVPVT-YQYYWQFGIGDVLIGDKSTGFCAPGCQAFADS 217 (239)
T ss_dssp T-TCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEE-EEEEEEE-EETTEEEEECCEEETTEECCTTTTCEEEEECT
T ss_pred C-CCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCc-eEEEEcc-cCCeEEEEeeEEEECCEEecccCCCCEEEEec
Confidence 5 6677899999998852 29999999 3455554 9999999 77899999999999998762 3456899999
Q ss_pred CC
Q 016180 306 DP 307 (394)
Q Consensus 306 ~~ 307 (394)
..
T Consensus 218 GT 219 (239)
T 1b5f_A 218 GT 219 (239)
T ss_dssp TC
T ss_pred Cc
Confidence 43
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=5.4e-33 Score=254.47 Aligned_cols=189 Identities=21% Similarity=0.409 Sum_probs=153.2
Q ss_pred ccCCceEEEeEeecCCC-C-CCCcceeeecCCCCCch------hhhh---hhccCCceEEeecCCC----CceEEeCC--
Q 016180 197 VALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDISL------ISQM---RTTIAGKFSYCLVPVS----STKINFGT-- 259 (394)
Q Consensus 197 ~~~~~~~fg~~~~~~~~-~-~~~~~GIlGLg~~~~sl------~~ql---~~~~~~~Fs~~l~~~~----~g~l~fGg-- 259 (394)
+++++|.|||++...+. | ....+||||||++.++. +.+| +.+.+++||+||.+.. .|+|+|||
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 37899999999998763 5 57899999999987652 2333 4567899999998863 39999999
Q ss_pred CCccCCCCeeeeeccCCCCceEEEEEEEEEccEEe-ccCCCcEEEcC-------------------C-----Cccccccc
Q 016180 260 NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVSTPDIVIDS-------------------D-----PTGSLELC 314 (394)
Q Consensus 260 ~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~~~~~iiDs-------------------~-----~~~~~~~c 314 (394)
.+++.|+ +.|+|+. ...||.|+|++|+|+++.+ ......+|+|| . ...+..+|
T Consensus 83 ~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~g~~~~~C 160 (241)
T 1lya_B 83 SKYYKGS-LSYLNVT-RKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIPC 160 (241)
T ss_dssp GGGEEEE-EEEEECS-SBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEETTEEEEEG
T ss_pred HHHcCCc-eEEEECc-cccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccCCcEEEEC
Confidence 3456665 9999999 7899999999999999764 34567899999 1 11223456
Q ss_pred cccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEEE-EEcCC-----CCcceechhhhceeEEEEECCCCEEEE
Q 016180 315 YSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSF 386 (394)
Q Consensus 315 ~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~rigf 386 (394)
+... .+|+|+|+|+|++++||+++|+++... +..|+. |++.+ .+.||||++|||++|+|||++++||||
T Consensus 161 ~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igf 237 (241)
T 1lya_B 161 EKVS---TLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDNNRVGF 237 (241)
T ss_dssp GGGG---GSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEETTTTEEEE
T ss_pred CCCc---cCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEECCCCEEEE
Confidence 6433 789999999999999999999998753 468997 88652 468999999999999999999999999
Q ss_pred eeCC
Q 016180 387 KPTD 390 (394)
Q Consensus 387 a~~~ 390 (394)
|+++
T Consensus 238 A~~~ 241 (241)
T 1lya_B 238 AEAA 241 (241)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 9975
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=3.3e-24 Score=167.04 Aligned_cols=86 Identities=33% Similarity=0.542 Sum_probs=78.1
Q ss_pred ccCCccEEEEEEecCCCceEEEEEEcCCCceeEecCCCCC--CCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCC
Q 016180 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (394)
Q Consensus 85 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c~~--~~C~~~~~~~y~p~~SsT~~~~~c~~~~C~~~~~~~c~ 162 (394)
+..+..|+++|.||||||+|.|+|||||+++||+|.+|.. ..|. .++.|||++|+||+...
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~--~~~~y~p~~SsT~~~~~--------------- 71 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW--IHHKYNSDKSSTYVKNG--------------- 71 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH--TSCCBCGGGCTTCEEEE---------------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC--CCCCCCchhCCCceeCC---------------
Confidence 4678899999999999999999999999999999999962 3574 57999999999999987
Q ss_pred CCCceeeEecCCCCeeeeEEEEEEEEecC
Q 016180 163 GVNCQYSVSYGDGSFSNGNLATETVTLGS 191 (394)
Q Consensus 163 ~~~~~~~~~Yg~gs~~~G~~~~D~v~~g~ 191 (394)
|.|.+.|++|+. .|.+++|+|+|++
T Consensus 72 ---~~~~i~Yg~Gs~-~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ---TSFDIHYGSGSL-SGYLSQDTVSVPC 96 (97)
T ss_dssp ---EEEEEECSSCEE-EEEEEEEEEEESC
T ss_pred ---CcEEEEECCcEE-EEEEEEEEEEECC
Confidence 999999999995 5999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.74 E-value=4.5e-18 Score=129.91 Aligned_cols=78 Identities=18% Similarity=0.402 Sum_probs=66.3
Q ss_pred ccccccccccCCCCCeEEEEEeCcEEEeccceeEEEeCC--ceEEEE-EEcCC----CCcceechhhhceeEEEEECCCC
Q 016180 310 SLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT----NSVPIYGNIMQTNFLVGYDIEQQ 382 (394)
Q Consensus 310 ~~~~c~~~~~~~~~P~i~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~----~~~~ilG~~fl~~~y~vfD~~~~ 382 (394)
+..+|.... ++|+|+|+|+|++++|+|++|+++... +..|++ |++.+ .+.||||++|||++|+|||++++
T Consensus 3 y~v~C~~~~---~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 3 LQVDCNTLS---SMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CEECGGGGG---GCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTT
T ss_pred EEEECCCCC---cCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCC
Confidence 345676544 789999999999999999999998653 368997 88742 46899999999999999999999
Q ss_pred EEEEeeCC
Q 016180 383 TVSFKPTD 390 (394)
Q Consensus 383 rigfa~~~ 390 (394)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999974
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.47 E-value=0.11 Score=42.52 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=27.0
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeEec
Q 016180 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQC 119 (394)
Q Consensus 87 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~ 119 (394)
..+.+++++.|+ .+++.+++|||++.+.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 456799999999 7899999999999988853
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=84.49 E-value=0.94 Score=34.54 Aligned_cols=26 Identities=23% Similarity=0.097 Sum_probs=23.5
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEe
Q 016180 91 YLIRISIGTPPTERLAVADTGSDLIWTQ 118 (394)
Q Consensus 91 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~ 118 (394)
-++.|.|| .|.+.+++|||.+++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 45789999 899999999999999996
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=83.73 E-value=1.1 Score=33.86 Aligned_cols=27 Identities=33% Similarity=0.364 Sum_probs=23.8
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEecC
Q 016180 92 LIRISIGTPPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 92 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 120 (394)
++.|.|| .|.+.+++|||.+++-+.-.
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 5679999 89999999999999999544
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=79.27 E-value=1.8 Score=32.54 Aligned_cols=27 Identities=19% Similarity=0.078 Sum_probs=23.7
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEecC
Q 016180 92 LIRISIGTPPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 92 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 120 (394)
++.|.|| .|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5779999 89999999999999999544
No 42
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=76.85 E-value=2.2 Score=32.81 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=26.3
Q ss_pred EEEEEec---CCCceEEEEEEcCCCceeEecCCCC
Q 016180 92 LIRISIG---TPPTERLAVADTGSDLIWTQCEPCP 123 (394)
Q Consensus 92 ~~~i~iG---tP~q~~~v~~DTGSs~~wv~~~~c~ 123 (394)
.+.|.|| +|+|.+..++|||-+++-+....+.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4566666 7899999999999999999876554
No 43
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=75.41 E-value=2.6 Score=32.77 Aligned_cols=27 Identities=19% Similarity=0.177 Sum_probs=23.0
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEecC
Q 016180 91 YLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 91 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 120 (394)
=++ |.|| .|.+.+++|||.+++-+.-.
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 344 9999 89999999999999999643
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=71.39 E-value=3.4 Score=33.56 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=26.9
Q ss_pred CccEEEEEEecCCCceEEEEEEcCCCceeEecC
Q 016180 88 NANYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 88 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~~ 120 (394)
..-|++++.|. .+++++++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45699999998 89999999999999998553
No 45
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=68.34 E-value=5.2 Score=30.84 Aligned_cols=29 Identities=14% Similarity=0.175 Sum_probs=25.0
Q ss_pred EEEEEecCCCceEEEEEEcCCCceeEecCCC
Q 016180 92 LIRISIGTPPTERLAVADTGSDLIWTQCEPC 122 (394)
Q Consensus 92 ~~~i~iGtP~q~~~v~~DTGSs~~wv~~~~c 122 (394)
.+.|.|| .|.+..++|||-+++-+.....
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5678999 8999999999999999976544
No 46
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=56.82 E-value=10 Score=30.12 Aligned_cols=28 Identities=18% Similarity=0.145 Sum_probs=24.3
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeEec
Q 016180 90 NYLIRISIGTPPTERLAVADTGSDLIWTQC 119 (394)
Q Consensus 90 ~Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~ 119 (394)
.-++.+.|+ .|++.+++|||.+++-+..
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 457789999 8999999999999999843
No 47
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=53.31 E-value=11 Score=32.15 Aligned_cols=27 Identities=33% Similarity=0.337 Sum_probs=23.8
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEec
Q 016180 91 YLIRISIGTPPTERLAVADTGSDLIWTQC 119 (394)
Q Consensus 91 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~ 119 (394)
-.+.|.|| .|.+.+++|||-+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 46789999 8999999999999999943
No 48
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=50.95 E-value=13 Score=29.17 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=19.8
Q ss_pred ecCCCceEEEEEEcCCCceeEecCCC
Q 016180 97 IGTPPTERLAVADTGSDLIWTQCEPC 122 (394)
Q Consensus 97 iGtP~q~~~v~~DTGSs~~wv~~~~c 122 (394)
|| .|.+..++|||-+++-+.....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 66 6888999999999999975533
No 49
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=41.69 E-value=23 Score=32.37 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=27.9
Q ss_pred cccccCCccEEEE---EEecC---CCceEEEEEEcCCCceeEecC
Q 016180 82 ADIIPNNANYLIR---ISIGT---PPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGt---P~q~~~v~~DTGSs~~wv~~~ 120 (394)
.++....+.|.++ |.||. +...+.+++|||+++++++..
T Consensus 186 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 186 TPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred EEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 3343345567665 56875 346789999999999999775
No 50
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=40.09 E-value=24 Score=32.21 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=27.3
Q ss_pred cccccCCccEEEE---EEecC-CCceEEEEEEcCCCceeEecCC
Q 016180 82 ADIIPNNANYLIR---ISIGT-PPTERLAVADTGSDLIWTQCEP 121 (394)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGt-P~q~~~v~~DTGSs~~wv~~~~ 121 (394)
.++....+.|.++ |.||. +.....+++|||+++++++...
T Consensus 182 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~~ 225 (323)
T 1bxo_A 182 TGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSV 225 (323)
T ss_dssp EECBCTTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHHH
T ss_pred EECCCCCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHHH
Confidence 3443344566665 56775 3356789999999999997753
No 51
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=37.39 E-value=27 Score=31.87 Aligned_cols=40 Identities=18% Similarity=0.301 Sum_probs=27.5
Q ss_pred cccccCCccEEEE---EEecCC---CceEEEEEEcCCCceeEecCC
Q 016180 82 ADIIPNNANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCEP 121 (394)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~wv~~~~ 121 (394)
.++....+.|.++ |.||.- .....+++|||+++++++...
T Consensus 185 ~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~ 230 (329)
T 1oew_A 185 TAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV 230 (329)
T ss_dssp EECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHHH
T ss_pred EEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHHH
Confidence 3343334566654 678752 346789999999999997753
No 52
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=36.39 E-value=29 Score=31.61 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=26.9
Q ss_pred cccccCCccEEEE---EEecC--CCceEEEEEEcCCCceeEecC
Q 016180 82 ADIIPNNANYLIR---ISIGT--PPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGt--P~q~~~v~~DTGSs~~wv~~~ 120 (394)
.++....+.|.+. |.||. +.....+++|||+++++++..
T Consensus 186 ~p~~~~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 186 VPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp EECBCTTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred EEccCCCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 3333334556654 67776 234578999999999999876
No 53
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=36.38 E-value=33 Score=31.26 Aligned_cols=39 Identities=31% Similarity=0.336 Sum_probs=27.4
Q ss_pred cccccCCccEEEE---EEecCC---CceEEEEEEcCCCceeEecC
Q 016180 82 ADIIPNNANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 82 ~~~~~~~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~wv~~~ 120 (394)
.++....+.|.++ |.||.- .....+++|||+++++++..
T Consensus 181 ~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 181 TDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp EECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred EEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 3443345566664 578752 35688999999999999775
No 54
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=33.49 E-value=39 Score=29.27 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=23.5
Q ss_pred ccEEEE---EEecCC-----CceEEEEEEcCCCceeEecC
Q 016180 89 ANYLIR---ISIGTP-----PTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 89 ~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~wv~~~ 120 (394)
+.|.++ |.||.- .....+++|||+++++++..
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 456664 677752 34578999999999999753
No 55
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=31.92 E-value=39 Score=28.78 Aligned_cols=27 Identities=33% Similarity=0.337 Sum_probs=23.8
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeEec
Q 016180 91 YLIRISIGTPPTERLAVADTGSDLIWTQC 119 (394)
Q Consensus 91 Y~~~i~iGtP~q~~~v~~DTGSs~~wv~~ 119 (394)
=.+.+.|| .|.+..++|||-+++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 46889999 7999999999999999944
No 56
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=31.00 E-value=16 Score=29.17 Aligned_cols=28 Identities=14% Similarity=0.179 Sum_probs=25.2
Q ss_pred CCcceechhhhceeEEEEECCCCEEEEe
Q 016180 360 NSVPIYGNIMQTNFLVGYDIEQQTVSFK 387 (394)
Q Consensus 360 ~~~~ilG~~fl~~~y~vfD~~~~rigfa 387 (394)
+...|||..||+++-...|+.+++|-|.
T Consensus 107 ~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 107 DIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 3468999999999999999999999885
No 57
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=30.60 E-value=37 Score=30.87 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=24.7
Q ss_pred CCccEEEE---EEecC--CCceEEEEEEcCCCceeEecC
Q 016180 87 NNANYLIR---ISIGT--PPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 87 ~~~~Y~~~---i~iGt--P~q~~~v~~DTGSs~~wv~~~ 120 (394)
..+.|.++ |.||. +.+...+++|||+++++++..
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~ 225 (323)
T 1izd_A 187 SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDS 225 (323)
T ss_dssp TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHH
T ss_pred CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHH
Confidence 34556664 46775 234578999999999999775
No 58
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=27.04 E-value=29 Score=27.86 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=28.6
Q ss_pred EEcCCCCcceechhhhceeEEEEECCCCEEEEeeC
Q 016180 355 FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPT 389 (394)
Q Consensus 355 i~~~~~~~~ilG~~fl~~~y~vfD~~~~rigfa~~ 389 (394)
+.+......|||..||+.+-.+.|+++++|-|...
T Consensus 101 Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 101 ILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp EETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred EeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 44443456899999999999999999999988653
No 59
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=26.79 E-value=52 Score=28.28 Aligned_cols=32 Identities=19% Similarity=0.367 Sum_probs=23.7
Q ss_pred ccEEE---EEEecCC----CceEEEEEEcCCCceeEecC
Q 016180 89 ANYLI---RISIGTP----PTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 89 ~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~wv~~~ 120 (394)
+.|.+ .|.||.- .....+++|||+++++++..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45655 4678752 24578999999999999775
No 60
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=21.03 E-value=60 Score=30.50 Aligned_cols=15 Identities=13% Similarity=0.065 Sum_probs=13.5
Q ss_pred EEEEcCCCceeEecC
Q 016180 106 AVADTGSDLIWTQCE 120 (394)
Q Consensus 106 v~~DTGSs~~wv~~~ 120 (394)
+++|||+++++++..
T Consensus 262 aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 262 TMISTSTPHMVLQQS 276 (403)
T ss_dssp EEECSSCSSEEECHH
T ss_pred EEEECCCccEEeCHH
Confidence 899999999999764
No 61
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=20.76 E-value=45 Score=30.43 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=24.3
Q ss_pred CccEEEE---EEecCC---CceEEEEEEcCCCceeEecCC
Q 016180 88 NANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCEP 121 (394)
Q Consensus 88 ~~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~wv~~~~ 121 (394)
.+.|.++ |.||.- .....+++|||+++++++...
T Consensus 192 ~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~ 231 (330)
T 1yg9_A 192 DDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKAY 231 (330)
T ss_dssp TTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHHH
T ss_pred CCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHHH
Confidence 3455554 778752 234679999999999998763
No 62
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=20.45 E-value=88 Score=28.72 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=22.7
Q ss_pred cEEE---EEEecCC----CceEEEE-EEcCCCceeEecCC
Q 016180 90 NYLI---RISIGTP----PTERLAV-ADTGSDLIWTQCEP 121 (394)
Q Consensus 90 ~Y~~---~i~iGtP----~q~~~v~-~DTGSs~~wv~~~~ 121 (394)
.|.+ .|.||.- .....++ +|||+++++++...
T Consensus 210 ~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~ 249 (361)
T 1mpp_A 210 FWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSF 249 (361)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHH
T ss_pred EEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHH
Confidence 4555 4678752 1235788 99999999998763
No 63
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=20.17 E-value=83 Score=30.46 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=23.7
Q ss_pred ccEEEE---EEecC-----CCceEEEEEEcCCCceeEecC
Q 016180 89 ANYLIR---ISIGT-----PPTERLAVADTGSDLIWTQCE 120 (394)
Q Consensus 89 ~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~wv~~~ 120 (394)
+.|.+. |.||. +.....+++|||++++++|..
T Consensus 231 ~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 231 GYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp TTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred CeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 456654 67774 235678999999999999764
Done!