Query 016182
Match_columns 394
No_of_seqs 212 out of 845
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 09:17:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dh3_A Transcription factor CR 99.5 2.1E-14 7.3E-19 108.4 6.3 52 255-306 1-52 (55)
2 2wt7_A Proto-oncogene protein 99.4 1.6E-12 5.6E-17 100.1 9.1 57 254-310 1-57 (63)
3 1t2k_D Cyclic-AMP-dependent tr 99.3 5E-12 1.7E-16 96.5 9.1 56 255-310 1-56 (61)
4 2dgc_A Protein (GCN4); basic d 99.3 5.3E-12 1.8E-16 97.7 6.8 52 256-307 10-61 (63)
5 1jnm_A Proto-oncogene C-JUN; B 99.3 7.6E-12 2.6E-16 95.9 7.5 55 255-309 1-55 (62)
6 1ci6_A Transcription factor AT 99.1 3.1E-10 1.1E-14 87.6 7.6 61 254-321 1-61 (63)
7 1gd2_E Transcription factor PA 99.0 1.1E-09 3.7E-14 86.6 8.4 61 257-317 10-70 (70)
8 1hjb_A Ccaat/enhancer binding 98.9 9E-09 3.1E-13 84.4 8.9 60 250-309 10-69 (87)
9 1gu4_A CAAT/enhancer binding p 98.8 9.8E-09 3.4E-13 82.7 8.8 60 250-309 10-69 (78)
10 3a5t_A Transcription factor MA 98.7 4.3E-10 1.5E-14 95.5 -3.9 57 248-304 30-86 (107)
11 2wt7_B Transcription factor MA 98.4 1.4E-06 4.8E-11 72.0 10.0 68 249-323 21-88 (90)
12 2oqq_A Transcription factor HY 97.2 0.00069 2.4E-08 48.7 5.9 40 275-321 2-41 (42)
13 1deb_A APC protein, adenomatou 96.7 0.0076 2.6E-07 45.1 7.8 47 278-324 5-51 (54)
14 1skn_P DNA-binding domain of S 96.4 0.0013 4.5E-08 54.3 2.4 31 253-283 60-90 (92)
15 3s9g_A Protein hexim1; cyclin 95.5 0.054 1.9E-06 45.5 8.1 50 274-323 35-91 (104)
16 2jee_A YIIU; FTSZ, septum, coi 94.9 0.12 4E-06 41.9 8.2 48 277-324 21-68 (81)
17 2w6a_A ARF GTPase-activating p 94.9 0.1 3.6E-06 40.1 7.4 40 279-318 23-62 (63)
18 3hnw_A Uncharacterized protein 94.8 0.12 4.1E-06 45.2 8.9 52 273-324 72-123 (138)
19 3a7p_A Autophagy protein 16; c 94.5 0.44 1.5E-05 42.6 11.7 74 249-322 62-135 (152)
20 3m48_A General control protein 94.3 0.045 1.5E-06 37.5 3.7 28 277-304 1-28 (33)
21 2c9l_Y EB1, zebra, BZLF1 trans 94.0 0.25 8.6E-06 37.6 7.8 39 259-297 5-43 (63)
22 2oxj_A Hybrid alpha/beta pepti 94.0 0.075 2.6E-06 36.6 4.4 30 276-305 1-30 (34)
23 1go4_E MAD1 (mitotic arrest de 93.8 0.17 5.9E-06 42.4 7.2 21 304-324 75-95 (100)
24 1kd8_B GABH BLL, GCN4 acid bas 93.6 0.11 3.8E-06 36.1 4.8 32 276-307 1-32 (36)
25 3oja_B Anopheles plasmodium-re 93.5 0.81 2.8E-05 46.3 13.1 41 283-323 537-577 (597)
26 1kd8_A GABH AIV, GCN4 acid bas 93.2 0.11 3.9E-06 36.1 4.3 32 277-308 2-33 (36)
27 3c3f_A Alpha/beta peptide with 93.0 0.14 4.8E-06 35.2 4.4 30 276-305 1-30 (34)
28 3hnw_A Uncharacterized protein 92.9 0.65 2.2E-05 40.5 9.7 49 275-323 81-129 (138)
29 2jee_A YIIU; FTSZ, septum, coi 92.8 0.52 1.8E-05 38.2 8.3 41 277-317 7-47 (81)
30 3vmx_A Voltage-gated hydrogen 92.8 0.42 1.5E-05 35.3 7.0 41 282-322 3-43 (48)
31 3he5_A Synzip1; heterodimeric 92.7 0.42 1.4E-05 34.5 6.8 45 277-321 4-48 (49)
32 2bni_A General control protein 92.2 0.16 5.4E-06 35.0 3.9 29 276-304 1-29 (34)
33 3c3g_A Alpha/beta peptide with 92.2 0.21 7.1E-06 34.2 4.4 28 278-305 2-29 (33)
34 3efg_A Protein SLYX homolog; x 92.0 0.37 1.3E-05 38.4 6.5 50 276-325 14-63 (78)
35 1uo4_A General control protein 91.9 0.19 6.4E-06 34.7 3.9 28 277-304 2-29 (34)
36 1t2k_D Cyclic-AMP-dependent tr 91.6 1.1 3.8E-05 33.6 8.4 37 284-320 23-59 (61)
37 2wq1_A General control protein 91.5 0.23 7.9E-06 34.0 4.1 27 278-304 2-28 (33)
38 3oja_B Anopheles plasmodium-re 91.5 1 3.6E-05 45.5 10.8 52 272-323 505-556 (597)
39 2hy6_A General control protein 91.3 0.27 9.2E-06 33.9 4.2 29 277-305 2-30 (34)
40 3a2a_A Voltage-gated hydrogen 91.3 0.5 1.7E-05 35.9 6.1 41 282-322 10-50 (58)
41 3m9b_A Proteasome-associated A 91.0 0.16 5.5E-06 48.7 4.0 42 275-316 53-94 (251)
42 3mq7_A Bone marrow stromal ant 90.9 1.1 3.8E-05 38.6 8.6 39 284-322 72-110 (121)
43 3cvf_A Homer-3, homer protein 90.8 0.41 1.4E-05 38.5 5.7 46 278-323 8-53 (79)
44 1ci6_A Transcription factor AT 90.6 0.77 2.6E-05 34.9 6.7 26 278-303 32-57 (63)
45 2dfs_A Myosin-5A; myosin-V, in 90.5 1.5 5.2E-05 49.2 11.8 18 306-323 1025-1042(1080)
46 2zxx_A Geminin; coiled-coil, c 90.3 0.67 2.3E-05 37.4 6.5 40 285-324 29-68 (79)
47 1uii_A Geminin; human, DNA rep 90.2 1 3.5E-05 36.6 7.5 40 285-324 41-80 (83)
48 3m91_A Proteasome-associated A 90.0 1.2 4E-05 33.1 7.1 38 278-315 11-48 (51)
49 4h22_A Leucine-rich repeat fli 89.9 1.3 4.4E-05 37.4 8.0 48 275-322 36-83 (103)
50 2yy0_A C-MYC-binding protein; 89.8 0.58 2E-05 34.8 5.3 31 284-321 20-50 (53)
51 4emc_A Monopolin complex subun 89.7 0.47 1.6E-05 43.8 5.7 67 277-352 14-82 (190)
52 2wt7_A Proto-oncogene protein 89.2 3.5 0.00012 31.1 9.5 36 285-320 25-60 (63)
53 2yy0_A C-MYC-binding protein; 89.0 0.73 2.5E-05 34.3 5.3 19 279-297 29-47 (53)
54 3m91_A Proteasome-associated A 89.0 1.6 5.4E-05 32.4 7.1 42 282-323 8-49 (51)
55 1t6f_A Geminin; coiled-coil, c 88.9 0.63 2.1E-05 32.5 4.5 30 289-318 6-35 (37)
56 3cve_A Homer protein homolog 1 88.8 1.6 5.5E-05 34.6 7.5 44 280-323 4-47 (72)
57 1jnm_A Proto-oncogene C-JUN; B 88.8 1.2 4.3E-05 33.4 6.6 31 286-316 25-55 (62)
58 2kz5_A Transcription factor NF 88.6 0.037 1.2E-06 45.7 -2.1 24 253-276 64-87 (91)
59 3s9g_A Protein hexim1; cyclin 88.3 2.5 8.5E-05 35.5 8.6 30 275-304 64-93 (104)
60 1hjb_A Ccaat/enhancer binding 88.3 3 0.0001 33.9 9.0 36 274-309 41-76 (87)
61 1wlq_A Geminin; coiled-coil; 2 88.1 1.5 5.1E-05 35.7 7.0 40 285-324 33-72 (83)
62 1fmh_A General control protein 87.6 0.68 2.3E-05 31.1 3.9 30 277-306 2-31 (33)
63 2wt7_B Transcription factor MA 87.4 1.4 4.9E-05 36.1 6.6 30 294-323 52-81 (90)
64 3m9b_A Proteasome-associated A 87.2 0.41 1.4E-05 45.9 3.8 43 282-324 53-95 (251)
65 3a7o_A Autophagy protein 16; c 86.9 2.4 8.3E-05 33.6 7.3 48 277-324 26-73 (75)
66 3trt_A Vimentin; cytoskeleton, 86.4 9.2 0.00031 29.3 10.5 58 257-317 19-76 (77)
67 3i00_A HIP-I, huntingtin-inter 86.3 8.9 0.00031 32.8 11.3 46 271-323 35-80 (120)
68 1wt6_A Myotonin-protein kinase 86.2 7.7 0.00026 31.4 10.1 61 263-326 14-74 (81)
69 1nkp_B MAX protein, MYC proto- 86.2 2.8 9.4E-05 32.9 7.5 33 292-324 49-81 (83)
70 2w83_C C-JUN-amino-terminal ki 86.0 1.2 4.1E-05 35.7 5.3 43 281-323 7-56 (77)
71 2wvr_A Geminin; DNA replicatio 85.8 2 7E-05 40.0 7.5 40 285-324 110-149 (209)
72 2r2v_A GCN4 leucine zipper; co 85.6 1.2 4.2E-05 30.6 4.4 29 277-305 2-30 (34)
73 3oja_A Leucine-rich immune mol 85.1 6.9 0.00024 38.8 11.6 44 279-322 424-467 (487)
74 1jcd_A Major outer membrane li 85.0 5.1 0.00017 29.8 7.9 45 277-321 5-49 (52)
75 3u06_A Protein claret segregat 84.8 2.6 8.8E-05 42.5 8.4 50 275-324 9-58 (412)
76 4etp_A Kinesin-like protein KA 84.3 3 0.0001 41.8 8.5 50 274-323 8-57 (403)
77 3htk_A Structural maintenance 84.2 7.1 0.00024 28.6 8.5 48 274-321 10-57 (60)
78 2v4h_A NF-kappa-B essential mo 84.1 12 0.0004 31.9 10.8 63 262-324 31-103 (110)
79 1nkp_B MAX protein, MYC proto- 84.1 1.2 4.2E-05 34.9 4.6 33 275-307 46-78 (83)
80 1gu4_A CAAT/enhancer binding p 83.0 4.3 0.00015 32.4 7.3 32 274-305 41-72 (78)
81 1nlw_A MAD protein, MAX dimeri 82.6 2.3 7.8E-05 33.7 5.6 27 295-321 52-78 (80)
82 3bas_A Myosin heavy chain, str 82.6 17 0.00058 29.1 12.2 52 273-324 32-83 (89)
83 2xdj_A Uncharacterized protein 82.5 10 0.00035 30.5 9.4 44 278-321 22-65 (83)
84 2v66_B Nuclear distribution pr 82.1 22 0.00076 30.1 12.3 46 278-323 37-82 (111)
85 3nmd_A CGMP dependent protein 82.0 6.3 0.00022 31.2 7.8 27 274-300 38-64 (72)
86 1ic2_A Tropomyosin alpha chain 82.0 7.4 0.00025 30.5 8.4 46 277-322 21-66 (81)
87 2oqq_A Transcription factor HY 81.9 2.8 9.6E-05 30.1 5.2 25 275-299 16-40 (42)
88 1nkp_A C-MYC, MYC proto-oncoge 81.9 6.3 0.00022 31.6 8.0 33 292-324 54-86 (88)
89 3o0z_A RHO-associated protein 81.8 14 0.00046 33.5 11.0 44 258-301 72-115 (168)
90 1dip_A Delta-sleep-inducing pe 81.6 0.62 2.1E-05 37.3 1.9 37 291-327 16-52 (78)
91 1ic2_A Tropomyosin alpha chain 81.3 18 0.0006 28.3 11.8 62 262-323 13-74 (81)
92 4h22_A Leucine-rich repeat fli 80.8 6.2 0.00021 33.2 7.8 79 252-333 7-89 (103)
93 1gmj_A ATPase inhibitor; coile 80.7 13 0.00046 30.2 9.5 8 264-271 25-32 (84)
94 2dgc_A Protein (GCN4); basic d 80.6 7.2 0.00024 29.6 7.5 25 299-323 32-56 (63)
95 2eqb_B RAB guanine nucleotide 80.5 5.8 0.0002 33.0 7.5 20 303-322 75-94 (97)
96 3a7p_A Autophagy protein 16; c 80.5 6.7 0.00023 35.1 8.4 24 300-323 99-122 (152)
97 3mq7_A Bone marrow stromal ant 80.5 6.4 0.00022 33.9 7.9 46 279-324 60-105 (121)
98 3nmd_A CGMP dependent protein 80.4 2.9 9.8E-05 33.2 5.3 28 296-323 39-66 (72)
99 3s4r_A Vimentin; alpha-helix, 80.2 7.9 0.00027 31.5 8.2 22 283-304 23-44 (93)
100 3o0z_A RHO-associated protein 80.0 22 0.00076 32.1 11.7 71 249-322 10-80 (168)
101 3na7_A HP0958; flagellar bioge 80.0 16 0.00054 34.0 11.3 33 277-309 91-123 (256)
102 2dfs_A Myosin-5A; myosin-V, in 79.3 7.7 0.00026 43.6 10.4 31 285-315 986-1016(1080)
103 1gd2_E Transcription factor PA 79.2 8.9 0.0003 30.0 7.8 33 277-309 37-69 (70)
104 2w83_C C-JUN-amino-terminal ki 78.8 9.4 0.00032 30.6 7.8 43 279-321 33-75 (77)
105 2v71_A Nuclear distribution pr 78.2 26 0.00089 32.1 11.8 46 278-323 90-135 (189)
106 3q8t_A Beclin-1; autophagy, AT 78.0 10 0.00035 31.0 8.2 23 298-320 61-83 (96)
107 2j5u_A MREC protein; bacterial 77.9 1 3.5E-05 42.4 2.5 36 288-323 24-62 (255)
108 3ghg_A Fibrinogen alpha chain; 77.6 5.3 0.00018 42.0 7.8 42 279-320 113-154 (562)
109 2lw1_A ABC transporter ATP-bin 77.5 7.7 0.00026 30.9 7.2 49 275-323 21-75 (89)
110 2wuj_A Septum site-determining 77.2 2.3 7.8E-05 31.7 3.7 28 277-304 28-55 (57)
111 2v66_B Nuclear distribution pr 77.0 11 0.00036 32.1 8.2 25 299-323 37-61 (111)
112 3u59_A Tropomyosin beta chain; 77.0 12 0.00041 30.5 8.4 6 294-299 48-53 (101)
113 4b4t_K 26S protease regulatory 76.6 3.9 0.00013 41.4 6.4 46 279-324 45-90 (428)
114 3u1c_A Tropomyosin alpha-1 cha 76.5 30 0.001 28.3 12.2 13 288-300 42-54 (101)
115 3cvf_A Homer-3, homer protein 76.4 28 0.00095 27.9 10.1 49 275-323 26-74 (79)
116 3oja_A Leucine-rich immune mol 76.3 23 0.00079 35.0 11.9 49 270-318 429-477 (487)
117 1nkp_A C-MYC, MYC proto-oncoge 75.8 7.1 0.00024 31.3 6.6 34 275-308 51-84 (88)
118 3swy_A Cyclic nucleotide-gated 75.3 12 0.00042 27.2 7.0 41 280-323 2-42 (46)
119 3mq9_A Bone marrow stromal ant 75.1 18 0.00062 35.6 10.7 30 295-324 434-463 (471)
120 1am9_A Srebp-1A, protein (ster 75.0 20 0.00068 28.2 8.9 66 259-324 6-77 (82)
121 2v71_A Nuclear distribution pr 74.7 43 0.0015 30.7 12.3 20 303-322 94-113 (189)
122 2xdj_A Uncharacterized protein 74.7 29 0.00098 27.8 9.8 49 269-317 20-68 (83)
123 1dh3_A Transcription factor CR 74.6 4.5 0.00015 30.0 4.7 28 297-324 22-49 (55)
124 1a93_B MAX protein, coiled coi 74.6 5.4 0.00019 27.5 4.7 13 308-320 18-30 (34)
125 2v4h_A NF-kappa-B essential mo 74.6 37 0.0013 28.8 10.8 48 276-323 62-109 (110)
126 3efg_A Protein SLYX homolog; x 74.3 11 0.00037 29.9 7.1 45 279-323 10-54 (78)
127 4dzn_A Coiled-coil peptide CC- 73.2 7.1 0.00024 26.1 4.8 9 309-317 21-29 (33)
128 3htk_A Structural maintenance 72.8 22 0.00076 25.8 8.2 46 278-323 7-52 (60)
129 2fxo_A Myosin heavy chain, car 72.8 33 0.0011 29.0 10.3 16 307-322 107-122 (129)
130 1joc_A EEA1, early endosomal a 72.8 23 0.00079 29.9 9.4 46 276-321 11-56 (125)
131 1ik9_A DNA repair protein XRCC 72.5 9.4 0.00032 35.4 7.4 30 280-309 136-165 (213)
132 3u1c_A Tropomyosin alpha-1 cha 71.9 39 0.0013 27.5 12.3 47 276-322 23-69 (101)
133 1p9i_A Cortexillin I/GCN4 hybr 71.8 5.2 0.00018 26.5 3.9 19 283-301 6-24 (31)
134 1wt6_A Myotonin-protein kinase 71.7 26 0.00087 28.4 8.7 50 263-312 25-74 (81)
135 3s4r_A Vimentin; alpha-helix, 71.2 39 0.0014 27.3 10.5 27 276-302 56-82 (93)
136 1am9_A Srebp-1A, protein (ster 71.1 6.1 0.00021 31.2 5.0 28 275-302 49-76 (82)
137 3cve_A Homer protein homolog 1 70.7 37 0.0013 26.7 10.6 49 275-323 20-68 (72)
138 1nlw_A MAD protein, MAX dimeri 70.7 9.7 0.00033 30.1 6.1 34 275-308 46-79 (80)
139 3swf_A CGMP-gated cation chann 70.2 11 0.00037 30.0 6.2 43 279-324 3-45 (74)
140 1fmh_B General control protein 70.1 7.5 0.00026 26.0 4.4 29 278-306 3-31 (33)
141 2eqb_B RAB guanine nucleotide 70.0 46 0.0016 27.6 12.2 49 276-324 12-60 (97)
142 3ghg_A Fibrinogen alpha chain; 70.0 13 0.00043 39.3 8.3 17 249-265 57-73 (562)
143 4ani_A Protein GRPE; chaperone 69.9 12 0.0004 35.0 7.4 12 344-355 146-157 (213)
144 1a93_B MAX protein, coiled coi 69.9 6.6 0.00023 27.0 4.2 26 290-315 7-32 (34)
145 1gk7_A Vimentin; intermediate 69.8 8.7 0.0003 26.9 5.0 28 295-322 11-38 (39)
146 3bbp_D GRIP and coiled-coil do 69.5 3.7 0.00013 32.4 3.3 49 279-327 18-66 (71)
147 4dzn_A Coiled-coil peptide CC- 69.4 11 0.00039 25.1 5.2 27 278-304 4-30 (33)
148 3i00_A HIP-I, huntingtin-inter 69.0 35 0.0012 29.0 9.7 18 278-295 17-34 (120)
149 2ve7_C Kinetochore protein NUF 68.9 6.8 0.00023 37.0 5.7 56 254-309 119-181 (250)
150 2oa5_A Hypothetical protein BQ 68.0 12 0.0004 31.9 6.3 26 276-301 8-33 (110)
151 2ve7_C Kinetochore protein NUF 67.8 2.4 8.2E-05 40.1 2.4 9 376-384 240-248 (250)
152 3na7_A HP0958; flagellar bioge 67.4 28 0.00096 32.3 9.6 47 276-322 32-78 (256)
153 4ati_A MITF, microphthalmia-as 67.0 16 0.00055 30.7 7.1 66 259-324 27-111 (118)
154 2oto_A M protein; helical coil 67.0 23 0.00079 30.6 8.4 32 278-309 52-83 (155)
155 1go4_E MAD1 (mitotic arrest de 66.7 11 0.00036 31.6 5.8 29 294-322 16-44 (100)
156 3q8t_A Beclin-1; autophagy, AT 66.5 51 0.0017 26.8 12.1 25 278-302 27-51 (96)
157 3ra3_A P1C; coiled coil domain 65.7 4.1 0.00014 26.4 2.3 24 286-309 3-26 (28)
158 4e61_A Protein BIM1; EB1-like 65.1 25 0.00084 29.7 7.7 46 279-324 7-52 (106)
159 3iv1_A Tumor susceptibility ge 64.9 49 0.0017 26.5 9.0 52 273-324 22-73 (78)
160 1p9i_A Cortexillin I/GCN4 hybr 64.9 6 0.0002 26.2 3.1 22 302-323 4-25 (31)
161 4emc_A Monopolin complex subun 64.4 7.9 0.00027 35.7 5.0 35 278-312 22-56 (190)
162 2xv5_A Lamin-A/C; structural p 64.0 38 0.0013 26.6 8.2 48 277-324 6-53 (74)
163 3a2a_A Voltage-gated hydrogen 63.9 19 0.00066 27.3 6.1 26 279-304 21-46 (58)
164 2ve7_A Kinetochore protein HEC 63.6 9.3 0.00032 37.0 5.7 35 282-316 184-218 (315)
165 3u59_A Tropomyosin beta chain; 63.5 58 0.002 26.3 12.3 48 275-322 22-69 (101)
166 3qh9_A Liprin-beta-2; coiled-c 63.2 35 0.0012 27.6 7.9 10 311-320 54-63 (81)
167 1dip_A Delta-sleep-inducing pe 63.0 5.1 0.00018 32.0 3.0 24 279-302 18-41 (78)
168 3tnu_B Keratin, type II cytosk 62.6 11 0.00038 31.8 5.3 22 279-300 46-67 (129)
169 1jcd_A Major outer membrane li 62.5 30 0.001 25.6 7.0 34 284-317 5-38 (52)
170 3bas_A Myosin heavy chain, str 62.1 47 0.0016 26.4 8.7 40 280-319 46-85 (89)
171 2xv5_A Lamin-A/C; structural p 61.9 51 0.0018 25.8 8.6 53 269-321 5-57 (74)
172 1lwu_C Fibrinogen gamma chain; 61.1 23 0.00078 34.8 7.9 44 277-320 13-56 (323)
173 2oxj_A Hybrid alpha/beta pepti 60.9 17 0.00058 25.0 4.8 27 294-320 5-31 (34)
174 2zvf_A Alanyl-tRNA synthetase; 60.7 15 0.00051 31.5 5.9 26 280-305 29-54 (171)
175 1g6u_A Domain swapped dimer; d 60.6 34 0.0012 24.5 6.6 24 299-322 22-45 (48)
176 4b4t_K 26S protease regulatory 60.5 15 0.00052 37.0 6.7 43 276-318 49-91 (428)
177 3iv1_A Tumor susceptibility ge 60.3 64 0.0022 25.8 10.8 54 271-324 13-66 (78)
178 3he5_B Synzip2; heterodimeric 59.9 30 0.001 25.2 6.3 25 287-311 21-45 (52)
179 2dq0_A Seryl-tRNA synthetase; 59.3 34 0.0012 34.7 9.1 25 297-321 76-100 (455)
180 3w03_C DNA repair protein XRCC 59.2 22 0.00074 32.6 6.9 28 277-304 146-173 (184)
181 1gmj_A ATPase inhibitor; coile 59.1 66 0.0023 26.1 8.9 38 263-300 36-75 (84)
182 1wle_A Seryl-tRNA synthetase; 59.0 72 0.0025 32.9 11.6 12 310-321 122-133 (501)
183 3qne_A Seryl-tRNA synthetase, 59.0 34 0.0012 35.3 9.1 50 272-321 43-102 (485)
184 1zme_C Proline utilization tra 58.6 8.4 0.00029 28.3 3.4 24 276-299 44-67 (70)
185 1gk6_A Vimentin; intermediate 57.9 29 0.001 25.8 6.3 45 279-323 3-47 (59)
186 2xzr_A Immunoglobulin-binding 57.5 85 0.0029 26.3 10.9 46 276-321 62-107 (114)
187 4gkw_A Spindle assembly abnorm 57.4 1E+02 0.0035 27.2 11.8 43 282-324 111-160 (167)
188 3jsv_C NF-kappa-B essential mo 57.4 72 0.0025 26.4 9.1 63 261-323 8-80 (94)
189 3u06_A Protein claret segregat 57.3 15 0.00051 37.0 6.0 41 279-319 20-60 (412)
190 1fxk_C Protein (prefoldin); ar 56.5 36 0.0012 28.2 7.4 29 279-307 98-126 (133)
191 1kd8_B GABH BLL, GCN4 acid bas 56.4 25 0.00086 24.4 5.1 28 294-321 5-32 (36)
192 3sja_C Golgi to ER traffic pro 56.3 30 0.001 26.9 6.2 23 300-322 35-57 (65)
193 3lay_A Zinc resistance-associa 55.8 42 0.0014 30.2 8.2 15 308-322 117-131 (175)
194 3uux_B Mitochondrial division 55.8 42 0.0014 32.0 8.4 54 275-328 176-229 (242)
195 2oa5_A Hypothetical protein BQ 55.6 6.3 0.00022 33.5 2.5 24 299-322 10-33 (110)
196 4etp_A Kinesin-like protein KA 55.2 42 0.0014 33.5 8.9 45 276-320 17-61 (403)
197 1zxa_A CGMP-dependent protein 54.8 18 0.0006 28.2 4.8 32 273-304 22-53 (67)
198 1ses_A Seryl-tRNA synthetase; 54.8 46 0.0016 33.3 9.1 29 294-322 68-96 (421)
199 2lz1_A Nuclear factor erythroi 54.5 0.28 9.5E-06 40.5 -5.7 22 254-275 65-86 (90)
200 2zqm_A Prefoldin beta subunit 54.3 44 0.0015 26.8 7.4 37 287-323 74-110 (117)
201 3tnu_A Keratin, type I cytoske 53.6 14 0.00049 31.3 4.5 23 279-301 48-70 (131)
202 3ljm_A Coil Ser L9C; de novo d 53.5 18 0.00062 23.9 3.9 25 278-302 3-27 (31)
203 2wuj_A Septum site-determining 53.2 13 0.00045 27.5 3.7 25 300-324 30-54 (57)
204 4ath_A MITF, microphthalmia-as 53.0 36 0.0012 27.5 6.5 16 308-323 60-75 (83)
205 1lwu_C Fibrinogen gamma chain; 52.8 32 0.0011 33.8 7.4 38 284-321 13-50 (323)
206 2xu6_A MDV1 coiled coil; prote 52.5 35 0.0012 27.0 6.1 50 275-324 20-69 (72)
207 2ocy_A RAB guanine nucleotide 52.3 83 0.0029 28.0 9.3 19 305-323 109-127 (154)
208 3ol1_A Vimentin; structural ge 52.2 1E+02 0.0035 25.7 12.3 35 290-324 69-103 (119)
209 1deq_A Fibrinogen (alpha chain 52.1 33 0.0011 34.8 7.4 46 275-320 112-157 (390)
210 3oa7_A Head morphogenesis prot 51.8 29 0.00099 32.3 6.5 50 285-334 32-81 (206)
211 2fxo_A Myosin heavy chain, car 51.7 1.1E+02 0.0037 25.7 12.3 41 281-321 67-107 (129)
212 3ra3_B P2F; coiled coil domain 51.2 13 0.00043 24.2 2.8 10 291-300 8-17 (28)
213 3swk_A Vimentin; cytoskeleton, 50.6 19 0.00065 28.8 4.5 35 277-311 1-35 (86)
214 2b5u_A Colicin E3; high resolu 50.5 1E+02 0.0035 32.4 10.9 16 198-215 213-228 (551)
215 4b4t_M 26S protease regulatory 50.1 14 0.00049 37.3 4.6 44 280-323 29-72 (434)
216 1ses_A Seryl-tRNA synthetase; 50.0 1.7E+02 0.0057 29.3 12.3 17 307-323 67-83 (421)
217 1m1j_A Fibrinogen alpha subuni 49.8 1.5E+02 0.0051 30.9 11.9 46 276-321 111-156 (491)
218 3w03_C DNA repair protein XRCC 49.7 46 0.0016 30.4 7.4 33 275-307 151-183 (184)
219 3qh9_A Liprin-beta-2; coiled-c 49.6 98 0.0033 25.0 8.4 45 276-320 26-77 (81)
220 1wle_A Seryl-tRNA synthetase; 49.5 52 0.0018 34.0 8.7 29 294-322 120-148 (501)
221 1kd8_A GABH AIV, GCN4 acid bas 49.3 38 0.0013 23.5 5.1 27 295-321 6-32 (36)
222 2fic_A Bridging integrator 1; 49.2 63 0.0021 29.1 8.4 11 313-323 199-209 (251)
223 2q6q_A Spindle POLE BODY compo 48.8 97 0.0033 24.4 8.3 43 274-323 15-57 (74)
224 1uii_A Geminin; human, DNA rep 48.3 40 0.0014 27.3 6.0 29 276-304 46-74 (83)
225 1hlo_A Protein (transcription 48.1 38 0.0013 26.2 5.8 18 271-288 24-41 (80)
226 1m1j_B Fibrinogen beta chain; 47.9 1.7E+02 0.0059 30.1 12.2 9 376-384 301-309 (464)
227 3q0x_A Centriole protein; cent 47.8 84 0.0029 29.5 9.1 41 276-316 178-218 (228)
228 3he5_A Synzip1; heterodimeric 47.2 76 0.0026 22.8 6.6 23 285-307 5-27 (49)
229 3tnu_A Keratin, type I cytoske 47.1 1.3E+02 0.0043 25.3 9.4 31 280-310 81-111 (131)
230 4ath_A MITF, microphthalmia-as 46.9 41 0.0014 27.2 5.9 32 275-306 48-79 (83)
231 1x8y_A Lamin A/C; structural p 46.9 1.1E+02 0.0036 24.3 9.6 49 275-323 27-75 (86)
232 3tnu_B Keratin, type II cytosk 46.9 1.3E+02 0.0043 25.2 9.7 11 251-261 35-45 (129)
233 2zvf_A Alanyl-tRNA synthetase; 46.8 23 0.00079 30.3 4.8 31 293-323 28-58 (171)
234 3mud_A DNA repair protein XRCC 46.7 66 0.0023 29.2 7.9 29 282-310 134-162 (175)
235 3vkg_A Dynein heavy chain, cyt 46.4 78 0.0027 39.9 10.8 36 287-322 2032-2067(3245)
236 1joc_A EEA1, early endosomal a 46.3 69 0.0024 26.9 7.6 37 280-316 8-44 (125)
237 1uix_A RHO-associated kinase; 46.1 78 0.0027 24.9 7.2 28 282-309 3-30 (71)
238 1s1c_X RHO-associated, coiled- 45.3 87 0.003 24.6 7.4 31 280-310 3-33 (71)
239 3q0x_A Centriole protein; cent 45.2 54 0.0018 30.9 7.3 42 279-320 174-215 (228)
240 4a3a_A Amphiphysin; structural 44.9 81 0.0028 29.2 8.5 50 271-323 139-195 (243)
241 3vkg_A Dynein heavy chain, cyt 44.9 1.1E+02 0.0038 38.6 11.8 20 274-293 2033-2052(3245)
242 3sjb_C Golgi to ER traffic pro 44.6 78 0.0027 26.1 7.3 23 300-322 52-74 (93)
243 3c3g_A Alpha/beta peptide with 44.6 45 0.0015 22.8 4.8 24 295-318 5-28 (33)
244 2er8_A Regulatory protein Leu3 44.6 12 0.0004 27.8 2.3 22 275-296 48-69 (72)
245 3jsv_C NF-kappa-B essential mo 44.5 1.2E+02 0.0042 25.0 8.5 50 275-324 39-88 (94)
246 3e98_A GAF domain of unknown f 43.5 44 0.0015 31.3 6.5 29 278-306 81-112 (252)
247 3he4_A Synzip6; heterodimeric 43.3 34 0.0012 25.2 4.4 35 277-311 18-52 (56)
248 1ik9_A DNA repair protein XRCC 43.1 88 0.003 28.8 8.4 32 274-305 137-168 (213)
249 2dq0_A Seryl-tRNA synthetase; 43.0 42 0.0014 34.0 6.8 43 281-323 43-88 (455)
250 2z5i_A TM, general control pro 42.4 90 0.0031 22.8 6.7 26 295-320 17-42 (52)
251 1fxk_A Prefoldin; archaeal pro 42.3 61 0.0021 25.5 6.4 33 289-321 71-103 (107)
252 3mtu_A Tropomyosin alpha-1 cha 42.3 43 0.0015 26.1 5.3 46 277-322 17-62 (75)
253 3c3f_A Alpha/beta peptide with 41.8 52 0.0018 22.6 4.8 24 295-318 6-29 (34)
254 1fzc_C Fibrin; blood coagulati 41.7 13 0.00045 36.5 2.7 45 276-320 4-48 (319)
255 3m48_A General control protein 41.1 39 0.0013 23.1 4.1 23 301-323 4-26 (33)
256 2odv_A Plectin 1, HD1; plakin 41.1 2.2E+02 0.0074 26.3 10.8 37 251-287 99-135 (235)
257 3ol1_A Vimentin; structural ge 40.9 1.6E+02 0.0054 24.5 10.8 77 245-324 13-96 (119)
258 1l8d_A DNA double-strand break 40.6 98 0.0033 24.7 7.4 23 298-320 79-101 (112)
259 2zqm_A Prefoldin beta subunit 40.5 94 0.0032 24.8 7.3 32 292-323 72-103 (117)
260 2hy6_A General control protein 40.4 54 0.0019 22.5 4.7 27 294-320 5-31 (34)
261 1fmh_A General control protein 40.2 45 0.0015 22.3 4.2 25 299-323 3-27 (33)
262 2l5g_B Putative uncharacterize 40.1 60 0.0021 23.2 5.2 31 280-310 6-36 (42)
263 4b4t_J 26S protease regulatory 40.1 30 0.001 34.8 5.1 43 275-324 24-66 (405)
264 1m1j_C Fibrinogen gamma chain; 39.9 21 0.0007 36.2 3.9 44 280-323 88-131 (409)
265 2dq3_A Seryl-tRNA synthetase; 39.8 37 0.0013 34.0 5.7 27 296-322 74-100 (425)
266 3tq2_A KE1; parallel three hel 39.6 72 0.0025 21.6 5.2 31 293-323 4-34 (36)
267 3qne_A Seryl-tRNA synthetase, 39.4 59 0.002 33.6 7.2 46 278-323 42-90 (485)
268 2b9c_A Striated-muscle alpha t 39.3 1.9E+02 0.0065 25.1 11.4 69 256-324 38-121 (147)
269 2i1j_A Moesin; FERM, coiled-co 39.3 24 0.00081 36.9 4.3 32 278-309 337-368 (575)
270 2b5u_A Colicin E3; high resolu 38.6 2E+02 0.0069 30.2 10.9 7 30-36 37-43 (551)
271 2wq1_A General control protein 38.6 64 0.0022 22.0 4.8 26 294-319 4-29 (33)
272 3ghg_C Fibrinogen gamma chain; 38.3 1.5E+02 0.0052 30.1 9.9 57 293-349 101-158 (411)
273 1hlo_A Protein (transcription 38.2 26 0.0009 27.1 3.4 11 306-316 66-76 (80)
274 2bni_A General control protein 37.6 46 0.0016 22.9 4.1 22 301-322 5-26 (34)
275 1gk6_A Vimentin; intermediate 37.6 1.2E+02 0.0042 22.4 8.1 47 275-321 6-52 (59)
276 2z5i_A TM, general control pro 37.6 1.1E+02 0.0038 22.3 6.6 36 265-300 8-43 (52)
277 3q4f_C DNA repair protein XRCC 37.4 59 0.002 29.9 6.0 20 284-303 162-181 (186)
278 2yko_A LINE-1 ORF1P; RNA-bindi 37.4 54 0.0018 31.0 6.0 42 281-322 4-45 (233)
279 3viq_B Mating-type switching p 37.2 1.1E+02 0.0038 24.7 7.1 19 306-324 50-68 (85)
280 2zdi_C Prefoldin subunit alpha 37.1 52 0.0018 28.1 5.5 36 281-316 103-138 (151)
281 2wvr_A Geminin; DNA replicatio 36.8 97 0.0033 28.9 7.5 29 276-304 115-143 (209)
282 1m1j_C Fibrinogen gamma chain; 36.7 83 0.0028 31.8 7.7 41 278-318 93-133 (409)
283 4dk0_A Putative MACA; alpha-ha 36.6 1.9E+02 0.0066 26.9 9.9 16 306-321 131-146 (369)
284 2wg5_A General control protein 36.5 30 0.001 28.6 3.7 24 301-324 11-34 (109)
285 1wlq_A Geminin; coiled-coil; 2 36.5 1.1E+02 0.0038 24.7 6.9 26 278-303 40-65 (83)
286 1uo4_A General control protein 36.4 56 0.0019 22.4 4.3 21 302-322 6-26 (34)
287 2r2v_A GCN4 leucine zipper; co 36.3 75 0.0026 21.8 4.9 28 294-321 5-32 (34)
288 1dkg_A Nucleotide exchange fac 35.7 52 0.0018 30.0 5.5 13 344-356 127-139 (197)
289 2q6q_A Spindle POLE BODY compo 35.7 1.6E+02 0.0055 23.2 7.7 46 279-324 6-51 (74)
290 1fxk_A Prefoldin; archaeal pro 35.6 1.2E+02 0.0039 23.9 7.0 32 292-323 67-98 (107)
291 3mov_A Lamin-B1; LMNB1, B-type 35.1 1.8E+02 0.0061 23.6 9.1 48 276-323 37-84 (95)
292 2aze_A Transcription factor DP 34.6 92 0.0031 27.8 6.7 17 272-288 22-38 (155)
293 1lwu_B Fibrinogen beta chain; 34.5 72 0.0025 31.2 6.6 10 340-349 72-81 (323)
294 1f5n_A Interferon-induced guan 34.4 2.3E+02 0.0078 29.7 10.8 9 58-66 75-83 (592)
295 2akf_A Coronin-1A; coiled coil 33.8 96 0.0033 20.8 5.0 23 281-303 4-26 (32)
296 3k29_A Putative uncharacterize 33.7 2.7E+02 0.0092 25.2 12.2 22 255-276 37-58 (169)
297 1yke_B RNA polymerase II holoe 33.6 56 0.0019 28.7 5.2 34 282-322 91-124 (151)
298 3okq_A BUD site selection prot 33.4 2.5E+02 0.0084 24.7 9.2 38 263-300 8-45 (141)
299 1ytz_T Troponin T; muscle, THI 33.2 2.1E+02 0.0073 23.8 10.2 43 281-323 47-89 (107)
300 1gk7_A Vimentin; intermediate 33.1 32 0.0011 23.9 2.9 18 283-300 20-37 (39)
301 3rrk_A V-type ATPase 116 kDa s 33.0 87 0.003 29.7 6.9 35 278-312 94-128 (357)
302 4ani_A Protein GRPE; chaperone 32.5 92 0.0032 28.9 6.7 26 278-303 68-93 (213)
303 3vmx_A Voltage-gated hydrogen 32.5 1.5E+02 0.005 21.8 7.2 29 276-304 11-39 (48)
304 3gp4_A Transcriptional regulat 32.4 1.1E+02 0.0037 25.9 6.7 10 250-259 42-51 (142)
305 3viq_B Mating-type switching p 32.0 2E+02 0.0069 23.2 9.1 23 280-302 5-27 (85)
306 4e61_A Protein BIM1; EB1-like 32.0 2.3E+02 0.0078 23.8 8.4 31 275-305 10-40 (106)
307 1ykh_B RNA polymerase II holoe 32.0 93 0.0032 26.5 6.2 24 298-321 100-123 (132)
308 2gkw_A TNF receptor-associated 31.9 72 0.0025 28.0 5.7 34 278-311 2-35 (192)
309 3lss_A Seryl-tRNA synthetase; 31.9 1E+02 0.0035 31.8 7.6 22 272-293 47-68 (484)
310 4dzo_A Mitotic spindle assembl 31.6 86 0.0029 26.6 5.9 26 276-301 4-29 (123)
311 1gk4_A Vimentin; intermediate 31.4 1.9E+02 0.0064 22.6 11.3 53 271-323 21-73 (84)
312 2zxx_A Geminin; coiled-coil, c 31.1 1.3E+02 0.0044 24.1 6.4 24 279-302 37-60 (79)
313 4gif_A Polycystic kidney disea 31.1 1.3E+02 0.0046 21.7 5.9 36 275-310 6-41 (45)
314 4avm_A Bridging integrator 2; 30.9 1.6E+02 0.0053 26.9 8.0 50 271-323 134-190 (237)
315 1fxk_C Protein (prefoldin); ar 30.6 1.6E+02 0.0054 24.2 7.3 39 279-317 91-129 (133)
316 2wg5_A General control protein 30.4 36 0.0012 28.1 3.2 32 299-332 16-47 (109)
317 3vp9_A General transcriptional 30.4 2.3E+02 0.0077 23.2 8.1 44 279-322 39-86 (92)
318 3ni0_A Bone marrow stromal ant 30.4 2.4E+02 0.0081 23.5 9.7 58 267-324 30-87 (99)
319 3rrk_A V-type ATPase 116 kDa s 30.2 1.6E+02 0.0055 27.9 8.2 26 279-304 229-254 (357)
320 3swf_A CGMP-gated cation chann 29.9 2.1E+02 0.0071 22.7 7.6 28 276-303 7-34 (74)
321 1f5n_A Interferon-induced guan 29.6 4.1E+02 0.014 27.8 11.8 8 264-271 496-503 (592)
322 2lq4_p Lysophosphatidic acid r 29.5 11 0.00038 29.4 -0.0 44 278-321 15-79 (80)
323 3q4f_C DNA repair protein XRCC 29.5 84 0.0029 28.9 5.7 26 274-299 159-184 (186)
324 2w6b_A RHO guanine nucleotide 29.4 1.8E+02 0.0063 21.9 7.1 23 280-302 14-36 (56)
325 3lss_A Seryl-tRNA synthetase; 29.1 3.2E+02 0.011 28.1 10.7 12 309-320 123-134 (484)
326 3ljm_A Coil Ser L9C; de novo d 28.8 72 0.0025 21.0 3.7 25 300-324 4-28 (31)
327 2l5g_B Putative uncharacterize 28.6 1.2E+02 0.0039 21.8 5.1 31 294-324 6-36 (42)
328 4ati_A MITF, microphthalmia-as 28.4 34 0.0012 28.7 2.8 35 275-309 73-110 (118)
329 1fzc_C Fibrin; blood coagulati 27.5 45 0.0015 32.7 3.8 40 284-323 5-44 (319)
330 4b4t_L 26S protease subunit RP 27.2 62 0.0021 32.7 4.9 16 309-324 84-99 (437)
331 4b4t_L 26S protease subunit RP 27.0 62 0.0021 32.7 4.9 34 277-317 66-99 (437)
332 3fpp_A Macrolide-specific effl 27.0 3.7E+02 0.013 24.7 10.0 12 309-320 133-144 (341)
333 1lrz_A FEMA, factor essential 27.0 1.9E+02 0.0064 28.3 8.2 49 275-323 246-300 (426)
334 2e7s_A RAB guanine nucleotide 27.0 58 0.002 28.5 4.0 46 278-323 34-79 (135)
335 3hhm_B NISH2 P85alpha; PI3KCA, 26.8 2.2E+02 0.0076 28.2 8.8 42 279-320 208-249 (373)
336 1deq_A Fibrinogen (alpha chain 26.8 3.6E+02 0.012 27.3 10.2 16 250-265 61-76 (390)
337 3iox_A AGI/II, PA; alpha helix 26.8 1.9E+02 0.0063 30.3 8.4 27 279-305 37-63 (497)
338 2aze_B Transcription factor E2 26.7 1.5E+02 0.005 24.5 6.3 32 279-310 9-40 (106)
339 1deb_A APC protein, adenomatou 26.6 2E+02 0.0068 21.4 6.2 21 302-322 8-28 (54)
340 3zwh_Q Myosin-9; Ca-binding pr 26.3 25 0.00087 25.4 1.4 24 298-321 7-30 (45)
341 2lw1_A ABC transporter ATP-bin 26.1 1.9E+02 0.0065 22.6 6.7 47 276-322 29-81 (89)
342 3he4_A Synzip6; heterodimeric 26.0 26 0.00089 25.8 1.4 43 282-324 9-51 (56)
343 3p7i_A PHND, subunit of alkylp 26.0 49 0.0017 31.2 3.7 53 245-297 260-312 (321)
344 1t3j_A Mitofusin 1; coiled coi 25.6 2.1E+02 0.0073 23.6 7.0 41 279-323 50-90 (96)
345 4dk0_A Putative MACA; alpha-ha 25.5 1.1E+02 0.0039 28.6 6.2 36 288-323 120-155 (369)
346 2p22_A Suppressor protein STP2 25.4 1.8E+02 0.0062 26.2 7.1 39 283-321 49-87 (174)
347 4b4t_J 26S protease regulatory 25.4 1E+02 0.0035 31.0 6.1 25 282-306 38-62 (405)
348 3a5t_A Transcription factor MA 25.4 9.3 0.00032 32.2 -1.3 29 294-322 62-90 (107)
349 1gk4_A Vimentin; intermediate 25.3 2.4E+02 0.0083 21.9 7.9 12 293-304 36-47 (84)
350 2p22_A Suppressor protein STP2 25.1 1.2E+02 0.0042 27.3 6.0 54 270-323 28-82 (174)
351 1zxa_A CGMP-dependent protein 25.1 1.3E+02 0.0044 23.4 5.3 24 301-324 29-52 (67)
352 3vlc_E Golgi to ER traffic pro 25.0 85 0.0029 25.9 4.5 23 300-322 59-81 (94)
353 3trt_A Vimentin; cytoskeleton, 24.9 2.2E+02 0.0076 21.4 9.0 41 282-322 34-74 (77)
354 1hs7_A Syntaxin VAM3; UP-and-D 24.7 1.1E+02 0.0038 25.1 5.2 45 279-323 36-83 (97)
355 3cl3_D NF-kappa-B essential mo 24.7 21 0.00073 31.1 0.8 28 267-294 21-48 (130)
356 2yo3_A General control protein 24.6 2E+02 0.0068 27.8 7.6 56 266-321 206-261 (268)
357 1x8y_A Lamin A/C; structural p 24.3 2.6E+02 0.0089 22.0 8.8 47 274-320 33-79 (86)
358 4dci_A Uncharacterized protein 24.2 3.4E+02 0.012 23.9 8.5 27 305-331 85-112 (150)
359 1hwt_C Protein (heme activator 23.6 43 0.0015 25.0 2.3 23 273-295 55-77 (81)
360 1l8d_A DNA double-strand break 23.5 2.8E+02 0.0094 22.0 11.2 52 273-324 28-98 (112)
361 3m0a_A TNF receptor-associated 23.5 2.2E+02 0.0076 20.9 8.2 27 282-308 18-44 (66)
362 3l4q_C Phosphatidylinositol 3- 23.5 2.7E+02 0.0091 25.1 7.8 41 281-321 115-155 (170)
363 3etw_A Adhesin A; antiparallel 23.4 2.9E+02 0.0099 23.5 7.7 16 305-320 72-87 (119)
364 2w6b_A RHO guanine nucleotide 23.2 1.6E+02 0.0055 22.2 5.2 28 295-322 8-35 (56)
365 3ghg_C Fibrinogen gamma chain; 23.2 93 0.0032 31.6 5.3 47 275-321 90-136 (411)
366 2akf_A Coronin-1A; coiled coil 23.2 1.1E+02 0.0037 20.5 3.8 24 287-310 3-26 (32)
367 3k66_A Beta-amyloid-like prote 23.1 4.9E+02 0.017 24.7 10.9 80 268-351 29-114 (239)
368 4h10_A ARYL hydrocarbon recept 23.0 1.7E+02 0.0059 22.5 5.7 35 254-288 4-38 (73)
369 3tq7_B Microtubule-associated 22.8 1.5E+02 0.0051 23.7 5.4 22 278-299 10-31 (82)
370 1m1j_B Fibrinogen beta chain; 22.7 6E+02 0.02 26.1 11.2 10 340-349 212-221 (464)
371 1no4_A Late, head morphogenesi 22.6 2.4E+02 0.0083 22.8 6.6 68 280-347 23-94 (97)
372 3n7n_E Monopolin complex subun 22.5 18 0.00062 30.0 0.0 31 288-318 41-71 (95)
373 1flk_A TNF receptor associated 22.0 98 0.0034 28.0 4.8 31 281-311 41-71 (228)
374 1j1d_C Troponin I, TNI; THIN f 21.9 3.3E+02 0.011 23.6 7.8 19 306-324 88-106 (133)
375 2no2_A HIP-I, huntingtin-inter 21.8 3.4E+02 0.012 22.4 11.7 39 285-323 56-94 (107)
376 1qvr_A CLPB protein; coiled co 21.5 3.5E+02 0.012 28.8 9.7 19 274-292 399-417 (854)
377 4i0x_B ESAT-6-like protein MAB 21.1 2.1E+02 0.0071 22.4 6.0 13 278-290 34-46 (103)
378 3mud_A DNA repair protein XRCC 21.1 1.7E+02 0.006 26.5 6.1 36 266-301 132-167 (175)
379 4ad8_A DNA repair protein RECN 20.9 2.9E+02 0.0098 27.6 8.4 45 258-302 189-239 (517)
380 3t97_B Nuclear pore complex pr 20.9 2.4E+02 0.0083 21.7 6.0 35 275-309 9-43 (65)
381 2pnv_A Small conductance calci 20.8 1.2E+02 0.0042 21.5 4.0 15 288-302 21-35 (43)
382 2zdi_C Prefoldin subunit alpha 20.8 2.4E+02 0.0082 23.8 6.8 33 278-310 107-139 (151)
383 1a93_A Coiled coil, LZ, MYC pr 20.8 1.8E+02 0.0061 19.9 4.7 18 305-322 15-32 (34)
384 4aj5_1 SKA3, spindle and kinet 20.7 3.7E+02 0.013 22.4 9.5 69 250-320 18-86 (101)
385 3qwe_A GMIP, GEM-interacting p 20.6 5.6E+02 0.019 24.5 11.4 68 266-333 134-223 (279)
386 1rtm_1 Mannose-binding protein 20.5 1.1E+02 0.0038 24.9 4.5 20 278-297 6-25 (149)
387 1vcs_A Vesicle transport throu 20.4 3.4E+02 0.012 21.8 8.0 49 276-324 38-94 (102)
388 2l5g_A GPS2 protein, G protein 20.4 1.1E+02 0.0038 21.4 3.6 21 275-295 14-34 (38)
389 3thf_A Protein shroom; coiled- 20.4 3.4E+02 0.012 24.9 7.9 31 271-301 14-44 (190)
390 2ve7_A Kinetochore protein HEC 20.3 95 0.0033 29.9 4.6 31 275-305 184-214 (315)
391 2e7s_A RAB guanine nucleotide 20.1 3.3E+02 0.011 23.7 7.5 21 303-323 95-115 (135)
392 2aze_A Transcription factor DP 20.0 2.6E+02 0.0089 24.9 6.9 35 284-318 6-40 (155)
No 1
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=99.50 E-value=2.1e-14 Score=108.42 Aligned_cols=52 Identities=37% Similarity=0.470 Sum_probs=49.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 255 KRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENS 306 (394)
Q Consensus 255 KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~ 306 (394)
||++|+++||+||++||.||++|+++|+.+|..|+.||..|..++..|++++
T Consensus 1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~ 52 (55)
T 1dh3_A 1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLY 52 (55)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999999999999999999999999987755
No 2
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=99.38 E-value=1.6e-12 Score=100.08 Aligned_cols=57 Identities=33% Similarity=0.503 Sum_probs=52.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 254 LKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 254 ~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
+||++|+++||+||++||.||++++++|+.+|+.|+.+|..|..+|..|++++..|.
T Consensus 1 Ekr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk 57 (63)
T 2wt7_A 1 EKRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLE 57 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999998877666554
No 3
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=99.33 E-value=5e-12 Score=96.55 Aligned_cols=56 Identities=30% Similarity=0.463 Sum_probs=50.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 255 KRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 255 KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
||++|+++||++|++||.||++++++|+.+|+.|+.+|..|..+|..|++++..|.
T Consensus 1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk 56 (61)
T 1t2k_D 1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLK 56 (61)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999866555443
No 4
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=99.28 E-value=5.3e-12 Score=97.69 Aligned_cols=52 Identities=33% Similarity=0.479 Sum_probs=44.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 256 RERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSE 307 (394)
Q Consensus 256 R~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~ 307 (394)
.++++.+||+||+|||.||++++++|+.+|+.|+.+|..|..+|..|++++.
T Consensus 10 ~~~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 10 AALKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455999999999999999999999999999999999999999887654
No 5
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=99.28 E-value=7.6e-12 Score=95.92 Aligned_cols=55 Identities=38% Similarity=0.485 Sum_probs=49.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 255 KRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 255 KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
|++||+++||+||++||.||++++++|+.+|+.|+.+|..|..+|..|++++..|
T Consensus 1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999999876654444
No 6
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=99.07 E-value=3.1e-10 Score=87.61 Aligned_cols=61 Identities=28% Similarity=0.433 Sum_probs=47.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 254 LKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 254 ~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+|+.+++++||.+|+|+|.||++++++|+.+++.|+.+|..|..+|..|+. |+..|+.-|.
T Consensus 1 ~k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~-------E~~~Lk~ll~ 61 (63)
T 1ci6_A 1 MKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAK-------EIQYLKDLIE 61 (63)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHH
T ss_pred CchHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHh
Confidence 368889999999999999999999999999999999999999999988755 5555555443
No 7
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=99.00 E-value=1.1e-09 Score=86.65 Aligned_cols=61 Identities=30% Similarity=0.353 Sum_probs=56.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 257 ERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 257 ~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
.||+..||.|+|..|.||++||.+|+.+|..|+.++..|..++..|+.++..|..||..|+
T Consensus 10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~lr 70 (70)
T 1gd2_E 10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILK 70 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999999999999999999999999999999999988775
No 8
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=98.85 E-value=9e-09 Score=84.45 Aligned_cols=60 Identities=27% Similarity=0.335 Sum_probs=50.9
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 250 NERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 250 dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
|..+.+...|+.+|.++|+|||.++++..++++.+|..|+.||..|+.+|..|+.++..|
T Consensus 10 dk~d~~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~L 69 (87)
T 1hjb_A 10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTL 69 (87)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455667788999999999999999999999999999999999999999876544444
No 9
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=98.84 E-value=9.8e-09 Score=82.66 Aligned_cols=60 Identities=27% Similarity=0.335 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 250 NERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 250 dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
|..+.+...|+.+|+++|+|||.++++...+++.+|..|+.||..|+.+|..|+.++..|
T Consensus 10 dk~d~~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~L 69 (78)
T 1gu4_A 10 DKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTL 69 (78)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444566788999999999999999999999999999999999999999876655544
No 10
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=98.69 E-value=4.3e-10 Score=95.46 Aligned_cols=57 Identities=28% Similarity=0.346 Sum_probs=44.8
Q ss_pred ccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 248 IQNERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 248 ~~dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
-.+..++|.+||+++||.+|+.||.||++++++||.++..|..+...|..++..|+.
T Consensus 30 ~~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En~~l~~ 86 (107)
T 3a5t_A 30 KEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENASMKL 86 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTTSHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999997766665555555444444433
No 11
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=98.42 E-value=1.4e-06 Score=71.96 Aligned_cols=68 Identities=26% Similarity=0.361 Sum_probs=52.4
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 249 QNERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 249 ~dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+-..+|..||.++||.+|+-||.||..+.++||.++..|..+...|+.++..+ ..|-..+++++..+
T Consensus 21 eev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~-------~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 21 DEVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRL-------ARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHh
Confidence 345678999999999999999999999999999988887776666666665555 45556666666544
No 12
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=97.21 E-value=0.00069 Score=48.68 Aligned_cols=40 Identities=33% Similarity=0.446 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
|+|+.+||.++..|+..|.+|..+|..| ..||..||+-|+
T Consensus 2 KaYl~eLE~r~k~le~~naeLEervstL-------q~EN~mLRqvl~ 41 (42)
T 2oqq_A 2 SAYLSELENRVKDLENKNSELEERLSTL-------QNENQMLRHILK 41 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhHHHHHHHhc
Confidence 5899999999999999999888888875 668999998775
No 13
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=96.70 E-value=0.0076 Score=45.05 Aligned_cols=47 Identities=32% Similarity=0.435 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.+.|-++|+.|+.||..|+.|+..-..++.+|+.|-.-+++-|+.+|
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq 51 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQ 51 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHc
Confidence 57899999999999999999999999999999999999999998876
No 14
>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1
Probab=96.40 E-value=0.0013 Score=54.30 Aligned_cols=31 Identities=26% Similarity=0.494 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 016182 253 ELKRERRKQSNRESARRSRLRKQAEAEELSR 283 (394)
Q Consensus 253 E~KR~RRk~sNRESARRSR~RKq~~leeLe~ 283 (394)
.+|..||+.+||.+|++||.||.+.+++|+.
T Consensus 60 ~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~ 90 (92)
T 1skn_P 60 LIRKIRRRGKNKVAARTCRQRRTDRHDKMSH 90 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence 4578889999999999999999999988764
No 15
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=95.46 E-value=0.054 Score=45.46 Aligned_cols=50 Identities=28% Similarity=0.356 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 274 KQAEAEELSRKVDSLIDENASLKS-------EINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~-------ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
=-+++-+|+.+++.|+.||..|+. +|..|..+++.|+.||..|+.+-.+-
T Consensus 35 LIqEYl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~~e~~~~ 91 (104)
T 3s9g_A 35 LIKEYLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLLTENELH 91 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345667899999999999988887 78888899999999999998887654
No 16
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=94.87 E-value=0.12 Score=41.94 Aligned_cols=48 Identities=27% Similarity=0.365 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.+.-|+.+++.|+.+|..|..++..++.....|..||..|+++....+
T Consensus 21 tI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq 68 (81)
T 2jee_A 21 TITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQ 68 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 344555666677777777777777766666677777887877776553
No 17
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=94.86 E-value=0.1 Score=40.13 Aligned_cols=40 Identities=33% Similarity=0.436 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
..-|.+|.+|..-|+.|..|+..++.++..|..||..||.
T Consensus 23 aaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr~ 62 (63)
T 2w6a_A 23 ATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQ 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhcc
Confidence 4456789999999999999999999999999999999984
No 18
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=94.84 E-value=0.12 Score=45.18 Aligned_cols=52 Identities=21% Similarity=0.198 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 273 RKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 273 RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+.+++++.|+.+++.+..|+..|+.++..++.+++.+..++..|+.++..++
T Consensus 72 k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~ 123 (138)
T 3hnw_A 72 KAKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQ 123 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777777777777777777777666666666666666666653
No 19
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=94.49 E-value=0.44 Score=42.62 Aligned_cols=74 Identities=16% Similarity=0.120 Sum_probs=60.7
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 249 QNERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 249 ~dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.+..+.+..++..+-+...++.-....+.+.+-..-++.|..|...|..++..+.+++..|+.||..|-+++..
T Consensus 62 ~~~~~~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~ 135 (152)
T 3a7p_A 62 HDDALLNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLK 135 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666767666666666677777888888899999999999999999999999999999999988864
No 20
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=94.27 E-value=0.045 Score=37.50 Aligned_cols=28 Identities=29% Similarity=0.518 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
+|..||.+|+.|-.+|..|..+|.+|+.
T Consensus 1 RM~QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 1 RMAQLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3678999999999999999999999865
No 21
>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y
Probab=94.04 E-value=0.25 Score=37.57 Aligned_cols=39 Identities=23% Similarity=0.286 Sum_probs=27.6
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 259 RKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKS 297 (394)
Q Consensus 259 Rk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ 297 (394)
.+-+||.++|++|.|=++.++....-...-..||..|+-
T Consensus 5 kryknr~asrk~rakfkn~lqh~r~vaaaks~en~rlr~ 43 (63)
T 2c9l_Y 5 KRYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRLRL 43 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 345699999999999888777766555555555555443
No 22
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=94.01 E-value=0.075 Score=36.58 Aligned_cols=30 Identities=27% Similarity=0.438 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
++|..||.+|+.|-.+|..|..++.+|+.-
T Consensus 1 eRMnQLE~kVEeLl~~n~~Le~eV~rLk~l 30 (34)
T 2oxj_A 1 XRMXQLEXKVXELLXKNXHLEXEVXRLKXL 30 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 357889999999999999999999988653
No 23
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=93.77 E-value=0.17 Score=42.40 Aligned_cols=21 Identities=24% Similarity=0.343 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 016182 304 ENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 304 ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+...+|..|+..||.+|..++
T Consensus 75 ~~~e~Lq~E~erLr~~v~~lE 95 (100)
T 1go4_E 75 EDHSQLQAECERLRGLLRAME 95 (100)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 445667777777777776654
No 24
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=93.62 E-value=0.11 Score=36.13 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSE 307 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~ 307 (394)
++|..|+.+|+.|..+|..|..++.+|++-+.
T Consensus 1 eRMnQLE~KVEeLl~~~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 1 XKVKQLKAKVEELKSKLWHLKNKVARLKKKNA 32 (36)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 35788999999999999999999999876543
No 25
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=93.49 E-value=0.81 Score=46.34 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 283 RKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 283 ~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+.+.|+.|...|..+++..+++..+|..|+..++++|+.+
T Consensus 537 ~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l 577 (597)
T 3oja_B 537 KETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQL 577 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444444444444444444444444444443
No 26
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=93.24 E-value=0.11 Score=36.07 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEK 308 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~ 308 (394)
+|..||.+|+.|..+|..|..++.+|+..+..
T Consensus 2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~ll~~ 33 (36)
T 1kd8_A 2 EVKQLEAEVEEIESEVWHLENEVARLEKENAE 33 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHHhcc
Confidence 56789999999999999999999998775543
No 27
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=92.97 E-value=0.14 Score=35.19 Aligned_cols=30 Identities=7% Similarity=0.228 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
++|..||.+|+.|-.+|..|..++.+|+.-
T Consensus 1 eRMnQLEdKVEeLl~~~~~Le~EV~RLk~l 30 (34)
T 3c3f_A 1 XRMXQIEXKLEXILSXLYHXENEXARIXKL 30 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 357889999999999999999999998753
No 28
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=92.87 E-value=0.65 Score=40.54 Aligned_cols=49 Identities=10% Similarity=0.144 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+.+++++.++..|+.++..++.++..+.+++..|..++..|..++..+
T Consensus 81 ~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 81 SLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555666666666666666666666666666666666666666554
No 29
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=92.84 E-value=0.52 Score=38.19 Aligned_cols=41 Identities=34% Similarity=0.362 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
-++.|+.+|..+-..+.-|+-+|..|++++..|..+|..|+
T Consensus 7 lleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~ 47 (81)
T 2jee_A 7 VFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQ 47 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666555555555555555555555555555533
No 30
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=92.77 E-value=0.42 Score=35.25 Aligned_cols=41 Identities=27% Similarity=0.263 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
++++..|+.-|..|..+|..|...|.+++.|+..|+.-|..
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LLkq 43 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQ 43 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 57788999999999999999999999999999999988764
No 31
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=92.74 E-value=0.42 Score=34.52 Aligned_cols=45 Identities=29% Similarity=0.291 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
-+..|+.+|..|+.||..|+.+.---+.-..-|+.|...||.++.
T Consensus 4 lvaqlenevaslenenetlkkknlhkkdliaylekeianlrkkie 48 (49)
T 3he5_A 4 LVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHhc
Confidence 356799999999999999998877767777788888888888764
No 32
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=92.22 E-value=0.16 Score=34.99 Aligned_cols=29 Identities=7% Similarity=0.368 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
++|..||.+|+.|-.+|..|..++.+|++
T Consensus 1 eRMnQLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 1 XRMKQIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 35788999999999999999999999865
No 33
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=92.20 E-value=0.21 Score=34.19 Aligned_cols=28 Identities=4% Similarity=0.200 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
|..||.+|+.|-.+|..|..++.+|+.-
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~l 29 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 6789999999999999999999998653
No 34
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=91.97 E-value=0.37 Score=38.39 Aligned_cols=50 Identities=16% Similarity=0.114 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQL 325 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lql 325 (394)
+++++||.++..++.-...|-..|..-..+...|..+.+.|..+|..++.
T Consensus 14 ~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 14 ARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVRS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 56889999999999999999999999999999999999999999987653
No 35
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=91.85 E-value=0.19 Score=34.66 Aligned_cols=28 Identities=7% Similarity=0.318 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
+|..||.+|+.|-.+|..|..|+.+|++
T Consensus 2 RM~QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 2 RMKQIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4678999999999999999999999865
No 36
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=91.56 E-value=1.1 Score=33.55 Aligned_cols=37 Identities=35% Similarity=0.277 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 284 KVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
.+..|+.+...|..++..|..++..|..|+..|+..|
T Consensus 23 ~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 23 WVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3556666666666666666666666666666666554
No 37
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=91.54 E-value=0.23 Score=33.96 Aligned_cols=27 Identities=15% Similarity=0.183 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
|..||.+|+.|..+|..|..+|.+|++
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 678999999999999999999998865
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=91.48 E-value=1 Score=45.50 Aligned_cols=52 Identities=21% Similarity=0.234 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 272 LRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 272 ~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+-.+.+..++.+.+.++.+++.++.+++..+++++.|+.|...|+.++.+.
T Consensus 505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~ 556 (597)
T 3oja_B 505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNK 556 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhh
Confidence 4445566677778888888888888888888888888888888777777664
No 39
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=91.34 E-value=0.27 Score=33.85 Aligned_cols=29 Identities=21% Similarity=0.401 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
+|..||.+|+.|-.+|..|..++.+|++-
T Consensus 2 RMnQLEdkVEeLl~~~~~Le~eV~RL~~l 30 (34)
T 2hy6_A 2 KVKQLADAVEELASANYHLANAVARLAKA 30 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56789999999999999999999998763
No 40
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=91.28 E-value=0.5 Score=35.87 Aligned_cols=41 Identities=24% Similarity=0.259 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
++++..|++.|-.|..+|+.|..+|.+.+.|+..|+.-|+.
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LLkq 50 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLRQ 50 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688888899999999999999999999999999888764
No 41
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=90.95 E-value=0.16 Score=48.68 Aligned_cols=42 Identities=24% Similarity=0.370 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAAL 316 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~L 316 (394)
..++.+|+.++..|...|..|..++..+++++..|+.|+..|
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL 94 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 94 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344566777777777777777776666655555555544444
No 42
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=90.86 E-value=1.1 Score=38.60 Aligned_cols=39 Identities=31% Similarity=0.465 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 284 KVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+|+.|+.|+..|..+|..+..++++|+.+|..|..+|..
T Consensus 72 ~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~~~ 110 (121)
T 3mq7_A 72 KVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 110 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHhhh
Confidence 466666666666666666666666677777777766643
No 43
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=90.84 E-value=0.41 Score=38.53 Aligned_cols=46 Identities=26% Similarity=0.342 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
++++..++..|+.+|+.|..+|..|+.++..-..+-..++.+|+.+
T Consensus 8 ~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l 53 (79)
T 3cvf_A 8 REETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRA 53 (79)
T ss_dssp --CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666666666665555555555555544
No 44
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=90.56 E-value=0.77 Score=34.93 Aligned_cols=26 Identities=35% Similarity=0.488 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLS 303 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ 303 (394)
+++|+.+...|+.+...|..|+..|+
T Consensus 32 ~~~L~~~N~~L~~~i~~L~~E~~~Lk 57 (63)
T 1ci6_A 32 CKELEKKNEALKERADSLAKEIQYLK 57 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444443
No 45
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=90.46 E-value=1.5 Score=49.24 Aligned_cols=18 Identities=17% Similarity=0.276 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 016182 306 SEKLRQENAALLEKLKSA 323 (394)
Q Consensus 306 ~~~L~~EN~~Lr~~L~~l 323 (394)
+..|+.||..|++++.++
T Consensus 1025 v~~L~~e~~~L~qq~~~l 1042 (1080)
T 2dfs_A 1025 VSELKEQNTLLKTEKEEL 1042 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334555555555555554
No 46
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=90.32 E-value=0.67 Score=37.36 Aligned_cols=40 Identities=33% Similarity=0.412 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+..--.||..|..+|..+.+++..|+.||..|++-+...+
T Consensus 29 L~eaL~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~~~~ 68 (79)
T 2zxx_A 29 LYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQ 68 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445568999999999999999999999999988877654
No 47
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=90.25 E-value=1 Score=36.64 Aligned_cols=40 Identities=30% Similarity=0.404 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+..--.||..|..+|..|.+++..|..+|..|+.-....|
T Consensus 41 L~eaL~EN~~Lh~~ie~l~eEi~~lk~en~eL~elae~~q 80 (83)
T 1uii_A 41 LYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQ 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445568899999999999999999999999988776554
No 48
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=89.98 E-value=1.2 Score=33.11 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAA 315 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~ 315 (394)
+.+|..++..|...|..|...+...++++..|..|...
T Consensus 11 ~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~ 48 (51)
T 3m91_A 11 IHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666777666666666666665555555444443
No 49
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=89.86 E-value=1.3 Score=37.37 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+..+++++..+.+|+.++.....++..++..+..|..+...|+.+|..
T Consensus 36 KD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~q 83 (103)
T 4h22_A 36 KDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQ 83 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666677777777777777777777777777777777777766653
No 50
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=89.85 E-value=0.58 Score=34.82 Aligned_cols=31 Identities=29% Similarity=0.334 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 284 KVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
.|+.|+.||..|+.++.. |..++..|+.+|.
T Consensus 20 d~eaLk~E~~eLk~k~~~-------L~~~~~el~~~l~ 50 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEA-------IVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHh
Confidence 455555555555555544 4556666666654
No 51
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=89.70 E-value=0.47 Score=43.83 Aligned_cols=67 Identities=16% Similarity=0.229 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcccccchhcccccCCCCchhhhhhhhcc
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA--QLGNKQEIVLNEDKRVTPVSTENLLSRVN 352 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l--ql~~~~E~~~~~~~~~~p~~~e~lls~~~ 352 (394)
+++.-...|..|..||..|..++.....++..|..+...|++++... ++....|.+. -+++|++.+-
T Consensus 14 ql~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~~~~~~e~i~---------i~~DL~e~LT 82 (190)
T 4emc_A 14 QIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAENSE---------VIKDLYEYLC 82 (190)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHhhh---------HHHHHHHHcc
Confidence 34444455666677777777776666666666666666666666443 2333333333 4666666663
No 52
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=89.19 E-value=3.5 Score=31.08 Aligned_cols=36 Identities=28% Similarity=0.283 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+..|+.+...|..++..|..++..|..|...|+..|
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l 60 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFIL 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555555555555544444443
No 53
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=89.02 E-value=0.73 Score=34.28 Aligned_cols=19 Identities=32% Similarity=0.646 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKS 297 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ 297 (394)
++|..+++.|+.++..|..
T Consensus 29 ~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 29 AEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444333
No 54
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=89.02 E-value=1.6 Score=32.43 Aligned_cols=42 Identities=26% Similarity=0.286 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+.++..|+.++..|..++..|.+-+...+.|...|+++|..+
T Consensus 8 ~~r~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 8 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 566777888888888888888888888888888888887654
No 55
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=88.85 E-value=0.63 Score=32.48 Aligned_cols=30 Identities=37% Similarity=0.550 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 289 IDENASLKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 289 ~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
-.||..|..+|..-.++...|..||.+|++
T Consensus 6 L~ENekLhk~ie~KdeeIa~Lk~eN~eL~E 35 (37)
T 1t6f_A 6 LKENEKLHKEIEQKDNEIARLKKENKELAE 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 468999999999999999999999998864
No 56
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=88.81 E-value=1.6 Score=34.56 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
++..+++.++.+|+.|..+|..|+.++..-..+-..++.+|+.+
T Consensus 4 ~~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~ 47 (72)
T 3cve_A 4 NSHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTL 47 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555555555555555555555555554443
No 57
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=88.79 E-value=1.2 Score=33.40 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 286 DSLIDENASLKSEINQLSENSEKLRQENAAL 316 (394)
Q Consensus 286 ~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~L 316 (394)
..|+.+...|..++..|..++..|..|+..|
T Consensus 25 ~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 25 ARLEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333333333
No 58
>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=88.63 E-value=0.037 Score=45.71 Aligned_cols=24 Identities=29% Similarity=0.374 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHH
Q 016182 253 ELKRERRKQSNRESARRSRLRKQA 276 (394)
Q Consensus 253 E~KR~RRk~sNRESARRSR~RKq~ 276 (394)
-+|..||+-+||.+|++||+||.+
T Consensus 64 lIrdiRRRgKNKvAAqnCRKRKld 87 (91)
T 2kz5_A 64 LVRDIRRRGKNKVAAQNYRKRKLE 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTSCCCCCCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 357788999999999999999854
No 59
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=88.33 E-value=2.5 Score=35.52 Aligned_cols=30 Identities=30% Similarity=0.314 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
-.++.+|+.+|+.|+.||+.|+.+....++
T Consensus 64 ~~~v~eLe~everL~~ENq~L~~e~~~~~~ 93 (104)
T 3s9g_A 64 DARVRELELELDRLRAENLQLLTENELHRQ 93 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 567888888888888888888888877655
No 60
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=88.33 E-value=3 Score=33.94 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
-+.++++|+.+-..|+.++..|..++..|+.-+..+
T Consensus 41 ~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~ 76 (87)
T 1hjb_A 41 TQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQL 76 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 455677777777777777777777777777665544
No 61
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=88.09 E-value=1.5 Score=35.70 Aligned_cols=40 Identities=33% Similarity=0.412 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+..--.||..|..+|..+.++...|..||..|++-....|
T Consensus 33 L~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~L~elA~~~q 72 (83)
T 1wlq_A 33 LYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQ 72 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445568888988899988888889999988887766543
No 62
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=87.62 E-value=0.68 Score=31.05 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENS 306 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~ 306 (394)
++..|+.+|.+.+.||-.|..++.+|..+|
T Consensus 2 evaqlekevaqaeaenyqleqevaqlehec 31 (33)
T 1fmh_A 2 EVAQLEKEVAQAEAENYQLEQEVAQLEHEC 31 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 356788888888888888888888887665
No 63
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=87.39 E-value=1.4 Score=36.15 Aligned_cols=30 Identities=30% Similarity=0.359 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.|..++..|..+.+.|..||..+..++..+
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~ 81 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAY 81 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444455566666666666554
No 64
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=87.21 E-value=0.41 Score=45.86 Aligned_cols=43 Identities=26% Similarity=0.271 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+.++..|+.++..|..++..|.+.+..++.|...|+++|..++
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~ 95 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLG 95 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6788999999999999999999999999999999999999885
No 65
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=86.86 E-value=2.4 Score=33.64 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
++.+-+.++..|+...+--.+..++|..++-.|-.||..|.++|..++
T Consensus 26 eL~~Ke~eI~~L~e~i~lk~kd~ErLNDEiislNIENNlL~~rl~~l~ 73 (75)
T 3a7o_A 26 ELKSKEQEIRRLKEVIALKNKNTERLNDELISGTIENNVLQQKLSDLK 73 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHhhHHHHHhHHHHHHHHHHHHHHh
Confidence 444445556666666555555677888888889999999999998876
No 66
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=86.37 E-value=9.2 Score=29.31 Aligned_cols=58 Identities=21% Similarity=0.134 Sum_probs=40.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 257 ERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 257 ~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
+.-..+||+-|-.-=. ..+++|...+..-..+....+.+|..|+..+..|+.|...||
T Consensus 19 E~ia~knr~EaE~~y~---~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 19 ESVAAKNLQEAEEWYK---SKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHH---HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3345566665543222 236678888887777777788888888888888888877765
No 67
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=86.27 E-value=8.9 Score=32.76 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 271 RLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 271 R~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
...-+.++..|+.+|..|+.+...-+.... ....||..|+.++..+
T Consensus 35 ~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q-------~a~~e~e~Lr~e~~~l 80 (120)
T 3i00_A 35 KTESQRVVLQLKGHVSELEADLAEQQHLRQ-------QAADDCEFLRAELDEL 80 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 444555666666666666666555554444 4455666666666654
No 68
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=86.21 E-value=7.7 Score=31.40 Aligned_cols=61 Identities=16% Similarity=0.281 Sum_probs=47.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 016182 263 NRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQLG 326 (394)
Q Consensus 263 NRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lql~ 326 (394)
|-.||-.+-.|-|+ -+..++...+..|..+.+++.....++..|..|...|+.++.+++..
T Consensus 14 eLQSALeaEIqAKQ---~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~ 74 (81)
T 1wt6_A 14 ELQEALEEEVLTRQ---SLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAE 74 (81)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 56666666555544 34445677788999999999999999999999999999999987643
No 69
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=86.16 E-value=2.8 Score=32.90 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 292 NASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 292 N~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
...|..++..|.++.+.|..+|..|+++|..++
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345666666677777777888888888887653
No 70
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=85.96 E-value=1.2 Score=35.73 Aligned_cols=43 Identities=30% Similarity=0.408 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHh
Q 016182 281 LSRKVDSLIDENASLKSEINQ-------LSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~-------L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+-.+|+.|-.||.+|.+.-+. |-.+++.|..|+..|+.+|...
T Consensus 7 mgkevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~E~e~l~~El~s~ 56 (77)
T 2w83_C 7 MGREVENLILENTQLLETKNALNIVKNDLIAKVDELTCEKDVLQGELEAV 56 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 334455555555554443322 2344455555555555555443
No 71
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=85.78 E-value=2 Score=40.04 Aligned_cols=40 Identities=30% Similarity=0.404 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+..--.||..|+.+|..|.+++..|+.||..|+.-+..+|
T Consensus 110 L~eaLeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~q 149 (209)
T 2wvr_A 110 LYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQ 149 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567888888888888888888888888887776654
No 72
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=85.55 E-value=1.2 Score=30.60 Aligned_cols=29 Identities=7% Similarity=0.196 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
+|..|+.+|+.|-.++..|..++.+|++-
T Consensus 2 RMnQledKvEel~~~~~~l~nEv~Rl~~l 30 (34)
T 2r2v_A 2 KLKQVADKLEEVASKLYHNANELARVAKL 30 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46789999999999999999998888653
No 73
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=85.09 E-value=6.9 Score=38.80 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.+++.+.+.++++....+.+++.|+++.+.|+.++.+|..++.+
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (487)
T 3oja_A 424 VEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALAS 467 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHh
Confidence 33444444444444455555555555555555555555544444
No 74
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=84.99 E-value=5.1 Score=29.81 Aligned_cols=45 Identities=9% Similarity=0.173 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
.+++|..+|..|..+...|..++..|+........|-..--++|.
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~RlD 49 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRAD 49 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 456677777776666666666666666655555555444444443
No 75
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=84.83 E-value=2.6 Score=42.55 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.+++++|+++++.|+.++..+..++..+++++.+.+.+.+.|..+|.+++
T Consensus 9 ~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~ 58 (412)
T 3u06_A 9 STEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLR 58 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35678888888888888888888888888888888888888888887763
No 76
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=84.26 E-value=3 Score=41.84 Aligned_cols=50 Identities=16% Similarity=0.171 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.++++++|+++++.|+.++..|..++..|.+++.+.+.+-+.|..+|.++
T Consensus 8 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~el 57 (403)
T 4etp_A 8 LKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQEL 57 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 45667777788888888888888888888887777777777777777775
No 77
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=84.19 E-value=7.1 Score=28.56 Aligned_cols=48 Identities=25% Similarity=0.268 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
.+..++++..++..++.+...+..++..+.+.+...+.+...|+.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~qi~ 57 (60)
T 3htk_A 10 LENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNE 57 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555566666666666666666666666666666666655554
No 78
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=84.08 E-value=12 Score=31.86 Aligned_cols=63 Identities=21% Similarity=0.222 Sum_probs=40.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHhh
Q 016182 262 SNRESARRSRLRKQAEAEELSRKVDSLID---ENASLKSEINQLSENS-------EKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 262 sNRESARRSR~RKq~~leeLe~rV~~L~~---EN~~L~~ei~~L~ee~-------~~L~~EN~~Lr~~L~~lq 324 (394)
.|-.+|-..=..|+..|++|..++..+.. .+..|+.++...+..+ +++-.|...|.++|..+|
T Consensus 31 ~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq 103 (110)
T 2v4h_A 31 QQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQ 103 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHH
Confidence 34456666666788888888887777776 5556666666555433 455666666666666654
No 79
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=84.06 E-value=1.2 Score=34.93 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSE 307 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~ 307 (394)
.+|+..|+.++..|+.+...|+.++..|+.++.
T Consensus 46 i~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~ 78 (83)
T 1nkp_B 46 TEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555555555544443
No 80
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=83.02 E-value=4.3 Score=32.37 Aligned_cols=32 Identities=22% Similarity=0.264 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
-+..+++|+.+-..|+.+...|..++..|+.-
T Consensus 41 ~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~l 72 (78)
T 1gu4_A 41 TQHKVLELTAENERLQKKVEQLSRELSTLRNL 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567777777777777777777777777653
No 81
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=82.64 E-value=2.3 Score=33.74 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 295 LKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
|..+...+.++.+.|..||..|+.+|.
T Consensus 52 L~~~~~~l~~e~~~L~~e~~~L~~~L~ 78 (80)
T 1nlw_A 52 LEDSDRKAVHQIDQLQREQRHLKRQLE 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333444444444555555555554
No 82
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=82.60 E-value=17 Score=29.07 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 273 RKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 273 RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+-.....+|+.+...|..+...|..++..+.+.|..|......|..+|..++
T Consensus 32 k~e~~rkele~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~ 83 (89)
T 3bas_A 32 KTERIKKELEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLK 83 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445567888999999999999999999999999999999999999998875
No 83
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=82.51 E-value=10 Score=30.46 Aligned_cols=44 Identities=11% Similarity=0.224 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+-+|..+++.|+.|...|+-+|+.+..++..|....+.+-..|.
T Consensus 22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD 65 (83)
T 2xdj_A 22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQID 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566777777777777777776666666666655555555543
No 84
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=82.13 E-value=22 Score=30.09 Aligned_cols=46 Identities=13% Similarity=0.205 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+..|+.++..|+..+..|...|..|.+.++.|+...+..-.-|.++
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~ 82 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDF 82 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHH
Confidence 4556666666666666666666666666666666555555544443
No 85
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=82.05 E-value=6.3 Score=31.22 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEIN 300 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~ 300 (394)
|.+.+++|+.++..+..++..|+.++.
T Consensus 38 kd~~I~eLEk~L~ekd~eI~~LqseLD 64 (72)
T 3nmd_A 38 RDALIDELELELDQKDELIQMLQNELD 64 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444433
No 86
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=81.97 E-value=7.4 Score=30.53 Aligned_cols=46 Identities=20% Similarity=0.219 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+++.++.++...+..+..+..+|..|+.++..|+.+...+.++|..
T Consensus 21 ~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~ 66 (81)
T 1ic2_A 21 RAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKD 66 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444444444444444444443
No 87
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=81.92 E-value=2.8 Score=30.10 Aligned_cols=25 Identities=24% Similarity=0.453 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEI 299 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei 299 (394)
.....||+.+|..|+.||+.|+.-+
T Consensus 16 e~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 16 ENKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 3456788999999999998888754
No 88
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=81.85 E-value=6.3 Score=31.61 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 292 NASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 292 N~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
...|..+...+..+...|..+|..|+.+|..|+
T Consensus 54 I~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L~ 86 (88)
T 1nkp_A 54 ILSVQAEEQKLISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 455666666666777778888888888888765
No 89
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=81.79 E-value=14 Score=33.55 Aligned_cols=44 Identities=25% Similarity=0.320 Sum_probs=31.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 258 RRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQ 301 (394)
Q Consensus 258 RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~ 301 (394)
..++.--+.=||.|.+-.+.+.+|+.++..|..|...++..+..
T Consensus 72 ~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k 115 (168)
T 3o0z_A 72 YQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEK 115 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666778888888888888888888777777666655444
No 90
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=81.61 E-value=0.62 Score=37.31 Aligned_cols=37 Identities=32% Similarity=0.390 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016182 291 ENASLKSEINQLSENSEKLRQENAALLEKLKSAQLGN 327 (394)
Q Consensus 291 EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lql~~ 327 (394)
|...|+.+|..|.+++.+|+.||..||.-..--+|.+
T Consensus 16 EVevLKe~I~EL~e~~~qLE~EN~~Lk~~aspEql~q 52 (78)
T 1dip_A 16 EVEILKEQIRELVEKNSQLERENTLLKTLASPEQLEK 52 (78)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 3446777777788888888999999998765544444
No 91
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=81.26 E-value=18 Score=28.34 Aligned_cols=62 Identities=19% Similarity=0.244 Sum_probs=47.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 262 SNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 262 sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
-.-+.|...-..-...+.+.+.+...++.+...|..+|..|..+++.+.........+|...
T Consensus 13 ~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLeea 74 (81)
T 1ic2_A 13 LDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLELA 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555666777888888888888888888888888888888888877777777654
No 92
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=80.82 E-value=6.2 Score=33.22 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hccc
Q 016182 252 RELKRERRKQSNRESARRSRLR--KQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA--QLGN 327 (394)
Q Consensus 252 rE~KR~RRk~sNRESARRSR~R--Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l--ql~~ 327 (394)
-|+|-.+-|++| |+.=-.| =.=+++-|..+++.++.....|+.++....++++.+......|+.++..+ ++.+
T Consensus 7 vEEKyrKAMVsn---AQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~q 83 (103)
T 4h22_A 7 VEEKYKKAMVSN---AQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQ 83 (103)
T ss_dssp -CCTHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556665 2221111 12357888999999999999999999999999999999999999999887 4666
Q ss_pred ccchhc
Q 016182 328 KQEIVL 333 (394)
Q Consensus 328 ~~E~~~ 333 (394)
-.++|.
T Consensus 84 RD~LI~ 89 (103)
T 4h22_A 84 REEMLE 89 (103)
T ss_dssp TTSCC-
T ss_pred HHHHHH
Confidence 555553
No 93
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=80.66 E-value=13 Score=30.17 Aligned_cols=8 Identities=50% Similarity=0.692 Sum_probs=3.7
Q ss_pred HHHHHHHH
Q 016182 264 RESARRSR 271 (394)
Q Consensus 264 RESARRSR 271 (394)
||+|+.-+
T Consensus 25 rEaA~Ee~ 32 (84)
T 1gmj_A 25 REQAEEER 32 (84)
T ss_dssp HHHHHHHH
T ss_pred HHHHhHHH
Confidence 44444444
No 94
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=80.60 E-value=7.2 Score=29.65 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 299 INQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 299 i~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+..|..++..|..+|..|+.++..|
T Consensus 32 ~~~Le~~v~~L~~eN~~L~~ev~~L 56 (63)
T 2dgc_A 32 MKQLEDKVEELLSKNYHLENEVARL 56 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444555555544444
No 95
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=80.54 E-value=5.8 Score=33.03 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016182 303 SENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 303 ~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+.+...++..|..|+.+|.+
T Consensus 75 r~e~~~~e~kn~~L~~qL~d 94 (97)
T 2eqb_B 75 RKEKYAIEILNKRLTEQLRE 94 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 34455566666666666654
No 96
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=80.51 E-value=6.7 Score=35.07 Aligned_cols=24 Identities=25% Similarity=0.192 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 300 NQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 300 ~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
..|+.++..|..++..|.+++..+
T Consensus 99 e~l~DEl~aLqlq~n~lE~kl~kL 122 (152)
T 3a7p_A 99 ERLNAALISGTIENNVLQQKLSDL 122 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444444444444333
No 97
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=80.49 E-value=6.4 Score=33.91 Aligned_cols=46 Identities=15% Similarity=0.117 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+.|+.+..+-....++|..||..|.+++..+..|...||.+...+.
T Consensus 60 ~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~ 105 (121)
T 3mq7_A 60 ASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLS 105 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhh
Confidence 3444444444445666777777777777777777777776666554
No 98
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=80.44 E-value=2.9 Score=33.17 Aligned_cols=28 Identities=14% Similarity=0.131 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 296 KSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 296 ~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
...|..|..++..+..+.+.|+.+|..+
T Consensus 39 d~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 39 DALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444444444555555555555444
No 99
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=80.23 E-value=7.9 Score=31.47 Aligned_cols=22 Identities=36% Similarity=0.380 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016182 283 RKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 283 ~rV~~L~~EN~~L~~ei~~L~e 304 (394)
.+|..|+++|..|..++..++.
T Consensus 23 dKVR~LEqqN~~Le~~i~~l~~ 44 (93)
T 3s4r_A 23 DKVRFLEQQNKILLAELEQLKG 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3455555555555555554443
No 100
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=80.02 E-value=22 Score=32.14 Aligned_cols=71 Identities=23% Similarity=0.281 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 249 QNERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 249 ~dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+-|+.+.-...+++ -|+=.--|+||+. .||...+..++..+..|...+..|......|..|+..|..+|..
T Consensus 10 ~LekQL~E~n~kLk-~EsE~~~rlkK~~--tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~q 80 (168)
T 3o0z_A 10 QLQKQLEEANDLLR-TESDTAVRLRKSH--TEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEA 80 (168)
T ss_dssp CTHHHHHHHHHHHH-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444 3555556677766 67777777777777777777777777777777777777666643
No 101
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=80.02 E-value=16 Score=33.98 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
+++.|..+++.++.++..|..++..+.++.+.+
T Consensus 91 E~~aL~kEie~~~~~i~~lE~eile~~e~ie~~ 123 (256)
T 3na7_A 91 ELRSLNIEEDIAKERSNQANREIENLQNEIKRK 123 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455544444444444444444443333
No 102
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=79.27 E-value=7.7 Score=43.60 Aligned_cols=31 Identities=26% Similarity=0.297 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAA 315 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~ 315 (394)
|..|+.|+..|+.++..+.+++..|+.++..
T Consensus 986 v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~ 1016 (1080)
T 2dfs_A 986 VLSLQEEIAKLRKELHQTQTEKKTIEEWADK 1016 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333333333
No 103
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=79.20 E-value=8.9 Score=29.97 Aligned_cols=33 Identities=27% Similarity=0.278 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
.+.+|+.....|..||..|+.+|..|..++..|
T Consensus 37 ~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~l 69 (70)
T 1gd2_E 37 QVVTLKELHSSTTLENDQLRQKVRQLEEELRIL 69 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345566666666666666666666666665543
No 104
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=78.77 E-value=9.4 Score=30.62 Aligned_cols=43 Identities=33% Similarity=0.466 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
++|-.+|+.|..|+..|+.++..+++-..+++..+..|.++|+
T Consensus 33 ~DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeElk 75 (77)
T 2w83_C 33 NDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEELR 75 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4666777777777777777777776666666666666665554
No 105
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=78.24 E-value=26 Score=32.14 Aligned_cols=46 Identities=13% Similarity=0.204 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+..|+.++..|+..+..|+..|..|...++.|+...+.+..-|..+
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~ 135 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDF 135 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHH
Confidence 4455555555555555555555555555555555555554444443
No 106
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=77.96 E-value=10 Score=31.01 Aligned_cols=23 Identities=13% Similarity=0.254 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 298 EINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 298 ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+.+.+..+...+..|...|..++
T Consensus 61 eyn~~~~ql~e~~dE~~Sl~~q~ 83 (96)
T 3q8t_A 61 EYSEFKRQQLELDDELKSVENQM 83 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333444444433
No 107
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=77.89 E-value=1 Score=42.45 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Q 016182 288 LIDENASLKSEINQLSE---NSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 288 L~~EN~~L~~ei~~L~e---e~~~L~~EN~~Lr~~L~~l 323 (394)
|.+||.+|+.|+..|++ ++..|+.||..||+.|...
T Consensus 24 l~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL~~~ 62 (255)
T 2j5u_A 24 TYTENQHLKERLEELAQLESEVADLKKENKDLKESLDIT 62 (255)
T ss_dssp --CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 44555555555554443 3456788999999987753
No 108
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=77.55 E-value=5.3 Score=42.02 Aligned_cols=42 Identities=17% Similarity=0.179 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
++|++++..|+.+...-...|..|+..++.++.+.+.|...|
T Consensus 113 ~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDI 154 (562)
T 3ghg_A 113 EDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDI 154 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555554444444444444444444444444444443
No 109
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=77.52 E-value=7.7 Score=30.86 Aligned_cols=49 Identities=24% Similarity=0.355 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQL------SENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L------~ee~~~L~~EN~~Lr~~L~~l 323 (394)
|.+++.|+.+++.|+.+...|..++..- -.++..|..+...|..+|..+
T Consensus 21 qrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~ 75 (89)
T 2lw1_A 21 QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQA 75 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4568899999999999999988888531 245556666666666666554
No 110
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=77.23 E-value=2.3 Score=31.74 Aligned_cols=28 Identities=14% Similarity=0.388 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
.++++...++.|..||..|+.++..|++
T Consensus 28 FLd~v~~~~~~l~~e~~~L~~~~~~l~~ 55 (57)
T 2wuj_A 28 FLAQVRKDYEIVLRKKTELEAKVNELDE 55 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455555555555555555555555443
No 111
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=77.05 E-value=11 Score=32.06 Aligned_cols=25 Identities=12% Similarity=0.229 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 299 INQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 299 i~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+..|+.++..|..+|..|+.+|..+
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReL 61 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVREL 61 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555554
No 112
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=77.00 E-value=12 Score=30.48 Aligned_cols=6 Identities=17% Similarity=0.556 Sum_probs=2.1
Q ss_pred HHHHHH
Q 016182 294 SLKSEI 299 (394)
Q Consensus 294 ~L~~ei 299 (394)
.|..++
T Consensus 48 sL~kKi 53 (101)
T 3u59_A 48 GLQKKL 53 (101)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 113
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=76.60 E-value=3.9 Score=41.35 Aligned_cols=46 Identities=20% Similarity=0.247 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.+|..++..|+.+...|..+...++.+...|..|...|+++++.+|
T Consensus 45 ~dl~~~lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee~~~l~ 90 (428)
T 4b4t_K 45 SDIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQ 90 (428)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4555555555555555555555666666666666666777776665
No 114
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=76.51 E-value=30 Score=28.27 Aligned_cols=13 Identities=23% Similarity=0.419 Sum_probs=4.6
Q ss_pred HHHHHHHHHHHHH
Q 016182 288 LIDENASLKSEIN 300 (394)
Q Consensus 288 L~~EN~~L~~ei~ 300 (394)
++.+...|..+|.
T Consensus 42 ~E~Ei~sL~kk~~ 54 (101)
T 3u1c_A 42 LEDDIVQLEKQLR 54 (101)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 3333333333333
No 115
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=76.43 E-value=28 Score=27.90 Aligned_cols=49 Identities=14% Similarity=0.166 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
..++..|+.+++.-+.+-..++.++..+.+.+..-..|...||+.|..+
T Consensus 26 e~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLakL 74 (79)
T 3cvf_A 26 EHQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLARL 74 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 4456777777777777777888888888888888888888888888764
No 116
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=76.29 E-value=23 Score=35.03 Aligned_cols=49 Identities=16% Similarity=0.070 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 270 SRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 270 SR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
-|.|.+++++....+++.|++||++|+.++..+..+..+.......+..
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (487)
T 3oja_A 429 VQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVV 477 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHH
Confidence 3444555566666666666666666666666655554444444333333
No 117
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=75.83 E-value=7.1 Score=31.33 Aligned_cols=34 Identities=24% Similarity=0.250 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEK 308 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~ 308 (394)
.+|+..|+.+...|..+...|+.+...|+.++..
T Consensus 51 ~~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~ 84 (88)
T 1nkp_A 51 TAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555555555555544444444444444433
No 118
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=75.25 E-value=12 Score=27.19 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+||.+|+.|+.-...|..++.+|-.++..- ...|+++|..+
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~ss---q~KlKqRit~l 42 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYNAT---QMKMKQRLSQL 42 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 577777777777777777777765554433 46677777665
No 119
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=75.11 E-value=18 Score=35.61 Aligned_cols=30 Identities=33% Similarity=0.331 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 295 LKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
|.+++.+-..+.++|+.|...|..+|+++.
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (471)
T 3mq9_A 434 LDAEKAQGQKKVEELEGEITTLNHKLQDAS 463 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444456666666666666666653
No 120
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=74.98 E-value=20 Score=28.15 Aligned_cols=66 Identities=23% Similarity=0.301 Sum_probs=38.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 259 RKQSNRESARRSRLRKQAEAEELSRKVDSL---IDENASL---KSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 259 Rk~sNRESARRSR~RKq~~leeLe~rV~~L---~~EN~~L---~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
|+..-..+-|+-|.+=...+.+|..-|-.. ...-.-| ..-|..|+.+...|..|+..|+.+++..+
T Consensus 6 rr~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~~~~ 77 (82)
T 1am9_A 6 KRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSK 77 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 334444555665655567777777655421 0011112 23355677788888888888888887654
No 121
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=74.72 E-value=43 Score=30.69 Aligned_cols=20 Identities=10% Similarity=0.197 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016182 303 SENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 303 ~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+.++..|..++..|+.+|..
T Consensus 94 q~el~~l~~~~~~l~~~ire 113 (189)
T 2v71_A 94 EDDLSQTRAIKEQLHKYVRE 113 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444433
No 122
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=74.67 E-value=29 Score=27.84 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 269 RSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 269 RSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
++-..=+..++.|..+|..|+-.+..+..+|..+.++...+..+...+.
T Consensus 20 q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl 68 (83)
T 2xdj_A 20 QLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS 68 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677777777777777777777777777776666665544333
No 123
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=74.61 E-value=4.5 Score=29.97 Aligned_cols=28 Identities=25% Similarity=0.421 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 297 SEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 297 ~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
..+..|..++..|+.||..|+.++..++
T Consensus 22 ~~~~~LE~~v~~L~~eN~~L~~~~~~L~ 49 (55)
T 1dh3_A 22 EYVKSLENRVAVLENQNKTLIEELKALK 49 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466777777788888888888888775
No 124
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=74.59 E-value=5.4 Score=27.47 Aligned_cols=13 Identities=31% Similarity=0.555 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHH
Q 016182 308 KLRQENAALLEKL 320 (394)
Q Consensus 308 ~L~~EN~~Lr~~L 320 (394)
.|+.+|..|.+++
T Consensus 18 dlkrQN~~Le~Qi 30 (34)
T 1a93_B 18 DLKRQNALLEQQV 30 (34)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444444
No 125
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=74.55 E-value=37 Score=28.84 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+.+.-|+.+|+.++..-..=+.--+++..+.+.|..++..|..++..+
T Consensus 62 E~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~~~l 109 (110)
T 2v4h_A 62 ETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKL 109 (110)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 478888889988888877777777778888888888888888877543
No 126
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=74.26 E-value=11 Score=29.90 Aligned_cols=45 Identities=20% Similarity=0.193 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
++|+.|+..|+.....+...|..|.+.+-....+...|+.+|..+
T Consensus 10 ~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L 54 (78)
T 3efg_A 10 QELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHL 54 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468888888888888888888888888888888888888888877
No 127
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=73.16 E-value=7.1 Score=26.13 Aligned_cols=9 Identities=56% Similarity=0.431 Sum_probs=3.6
Q ss_pred HHHHHHHHH
Q 016182 309 LRQENAALL 317 (394)
Q Consensus 309 L~~EN~~Lr 317 (394)
|..|...|+
T Consensus 21 lkfeiaalk 29 (33)
T 4dzn_A 21 LKFEIAALK 29 (33)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333444443
No 128
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=72.82 E-value=22 Score=25.81 Aligned_cols=46 Identities=11% Similarity=0.193 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+..|+..+..+..+...+..++..++.++..+..+....+..|..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~ 52 (60)
T 3htk_A 7 KKTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKK 52 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555555555555555555555555443
No 129
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=72.79 E-value=33 Score=28.98 Aligned_cols=16 Identities=25% Similarity=0.385 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHHH
Q 016182 307 EKLRQENAALLEKLKS 322 (394)
Q Consensus 307 ~~L~~EN~~Lr~~L~~ 322 (394)
.+|..+...|+.+|..
T Consensus 107 kkle~e~~~Lk~~led 122 (129)
T 2fxo_A 107 RKLEDECSELKRDIDD 122 (129)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333344444444433
No 130
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=72.77 E-value=23 Score=29.85 Aligned_cols=46 Identities=15% Similarity=0.214 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+.+-..|.+|+.|+.++.+|+.++.....-...|-.+|..|..++.
T Consensus 11 ~~~~~~e~e~~~l~~~~~el~~~l~~~~~~~~e~g~~~~~lq~~~~ 56 (125)
T 1joc_A 11 ERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHT 56 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 3444555567777777777777777666666666667777665543
No 131
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=72.52 E-value=9.4 Score=35.37 Aligned_cols=30 Identities=30% Similarity=0.281 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
+|+.++..|+.+|..|..+++.|..+++++
T Consensus 136 ~~~~~~~~L~~e~~~l~~~~~~l~~qlE~~ 165 (213)
T 1ik9_A 136 ENQAKNEHLQKENERLLRDWNDVQGRFEKA 165 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444444444443333
No 132
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=71.87 E-value=39 Score=27.53 Aligned_cols=47 Identities=19% Similarity=0.267 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.+.+.++.++..++.++..+-.+|..|+.++..|+.+...+..+|..
T Consensus 23 drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~e 69 (101)
T 3u1c_A 23 DRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHK 69 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444445555555555555555555555444444444444443
No 133
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=71.83 E-value=5.2 Score=26.46 Aligned_cols=19 Identities=32% Similarity=0.429 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 016182 283 RKVDSLIDENASLKSEINQ 301 (394)
Q Consensus 283 ~rV~~L~~EN~~L~~ei~~ 301 (394)
.-+..|+.||.+|+.+++.
T Consensus 6 allasleaenkqlkakvee 24 (31)
T 1p9i_A 6 ALLASLEAENKQLKAKVEE 24 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444443
No 134
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=71.67 E-value=26 Score=28.36 Aligned_cols=50 Identities=22% Similarity=0.324 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 263 NRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQE 312 (394)
Q Consensus 263 NRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~E 312 (394)
.+++-++-=.+=+.-.-.++.++...+..|..|..++..|++++..|..+
T Consensus 25 AKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~ 74 (81)
T 1wt6_A 25 TRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAE 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333333334445556667777788888888888888877777765443
No 135
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=71.21 E-value=39 Score=27.29 Aligned_cols=27 Identities=37% Similarity=0.576 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L 302 (394)
.++.+|..+|..+..++..|..++..|
T Consensus 56 ~~i~~Lr~~i~~~~~ek~~l~~e~dnl 82 (93)
T 3s4r_A 56 EEMRELRRQVDQLTNDKARVEVERDNL 82 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444444443
No 136
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=71.05 E-value=6.1 Score=31.17 Aligned_cols=28 Identities=21% Similarity=0.211 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L 302 (394)
-+|+.+|+.++..|+.++..|+.++...
T Consensus 49 i~YI~~Lq~~~~~L~~e~~~L~~~~~~~ 76 (82)
T 1am9_A 49 IDYIRFLQHSNQKLKQENLSLRTAVHKS 76 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5778888888888888887777776654
No 137
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=70.70 E-value=37 Score=26.75 Aligned_cols=49 Identities=16% Similarity=0.243 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
...+..|+.+++.-+.+-..++.++..+.+.+..-..|...||+.|..+
T Consensus 20 e~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~LakL 68 (72)
T 3cve_A 20 EGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLAKL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 4556777777777777777788888888888888888888888888764
No 138
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=70.68 E-value=9.7 Score=30.07 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEK 308 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~ 308 (394)
.+|+..|+.+...|..++..|+.++..|+.++..
T Consensus 46 ~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~ 79 (80)
T 1nlw_A 46 KLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEK 79 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5778888888888877777777777777766554
No 139
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=70.20 E-value=11 Score=30.03 Aligned_cols=43 Identities=16% Similarity=0.254 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
++||.+|+.|+.-...|..++.+|-.++... ...|+++|..+.
T Consensus 3 ~dlEEKv~~LE~sld~LQTrfARLLaEy~ss---Q~KLKqRit~LE 45 (74)
T 3swf_A 3 MGLEEKVTRMESSVDLLQTRFARILAEYESM---QQKLKQRLTKVE 45 (74)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 4577777777777777777777765554433 456677776653
No 140
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=70.10 E-value=7.5 Score=26.02 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENS 306 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~ 306 (394)
+..|..+|..|+..|-.-+.+++.|+.+|
T Consensus 3 vqalkkrvqalkarnyaakqkvqalrhkc 31 (33)
T 1fmh_B 3 VQALKKRVQALKARNYAAKQKVQALRHKC 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 45677777777777777777777776665
No 141
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=70.01 E-value=46 Score=27.61 Aligned_cols=49 Identities=20% Similarity=0.268 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+++..|+.++.....+...|..++..-+......+.++..|..+|.+|.
T Consensus 12 e~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLT 60 (97)
T 2eqb_B 12 EDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLT 60 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666666666666666666666666677777777776664
No 142
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=69.97 E-value=13 Score=39.26 Aligned_cols=17 Identities=12% Similarity=0.155 Sum_probs=9.2
Q ss_pred cchHHHHHHHHHHHhHH
Q 016182 249 QNERELKRERRKQSNRE 265 (394)
Q Consensus 249 ~dErE~KR~RRk~sNRE 265 (394)
.-|++.+..-.+++|..
T Consensus 57 kqErDltkrINELKnqL 73 (562)
T 3ghg_A 57 EVNQDFTNRINKLKNSL 73 (562)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHH
Confidence 34555655555555543
No 143
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=69.94 E-value=12 Score=34.95 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=7.2
Q ss_pred hhhhhhhccCCC
Q 016182 344 TENLLSRVNNSG 355 (394)
Q Consensus 344 ~e~lls~~~~~~ 355 (394)
...|+..+...|
T Consensus 146 ~k~l~~~L~k~G 157 (213)
T 4ani_A 146 YRSLVDALKKEG 157 (213)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC
Confidence 455666666555
No 144
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=69.94 E-value=6.6 Score=27.05 Aligned_cols=26 Identities=23% Similarity=0.359 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 290 DENASLKSEINQLSENSEKLRQENAA 315 (394)
Q Consensus 290 ~EN~~L~~ei~~L~ee~~~L~~EN~~ 315 (394)
.+|+.....|..|++++..|+.+.+.
T Consensus 7 rKn~a~qqDIddlkrQN~~Le~Qir~ 32 (34)
T 1a93_B 7 RKNDTHQQDIDDLKRQNALLEQQVRA 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 34444444455555555555544443
No 145
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=69.78 E-value=8.7 Score=26.87 Aligned_cols=28 Identities=25% Similarity=0.369 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 295 LKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
|-.++...-+++..|+.+|..|..+|..
T Consensus 11 LNdrlAsyidkVR~LE~~N~~Le~~i~~ 38 (39)
T 1gk7_A 11 LNDRFANYIDKVRFLEQQNKILLAELEQ 38 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444455566778888888877753
No 146
>3bbp_D GRIP and coiled-coil domain-containing protein 2; golgi complex, GRIP domain, RAB GTPase, ARL GTPase, golgin, RAB effector, clAsp protein; HET: GTP; 3.00A {Homo sapiens}
Probab=69.51 E-value=3.7 Score=32.43 Aligned_cols=49 Identities=16% Similarity=0.220 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQLGN 327 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lql~~ 327 (394)
++|.+++..++..+..|..=+..-...+..|..+|..||.+|..+...+
T Consensus 18 eel~~~L~~~~k~~~Hl~~LL~EsEatnarL~eq~~lLK~EIRRlERnq 66 (71)
T 3bbp_D 18 EELVQKLSSTTKSADHLNGLLRETEATNAILMEQIKLLKSEIRRLERNQ 66 (71)
T ss_dssp -----------CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhH
Confidence 3444455555555555555455555555566666777777766654443
No 147
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=69.44 E-value=11 Score=25.14 Aligned_cols=27 Identities=33% Similarity=0.420 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
+..|.+++..|+.|...|+-+|..|++
T Consensus 4 iaalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 4 IAALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344555555555555555555555544
No 148
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=69.00 E-value=35 Score=29.05 Aligned_cols=18 Identities=22% Similarity=0.357 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASL 295 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L 295 (394)
++.|..+|+.|+.++..|
T Consensus 17 Ie~Lkreie~lk~ele~l 34 (120)
T 3i00_A 17 IERLYREISGLKAQLENM 34 (120)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444444
No 149
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=68.86 E-value=6.8 Score=36.96 Aligned_cols=56 Identities=18% Similarity=0.197 Sum_probs=24.4
Q ss_pred HHHHHHHHHh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 254 LKRERRKQSN-------RESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 254 ~KR~RRk~sN-------RESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
.||-||.++- ||...---....++.+++..++++|..||+.|..+|+.|+++..+.
T Consensus 119 ~~Rt~~iLSalINF~~FRE~~~~~~~e~~~~~e~~~~~i~ql~~En~~le~~Ie~Lk~e~~e~ 181 (250)
T 2ve7_C 119 AKRTSRFLSGIINFIHFREACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVDED 181 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCC---------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3567776543 3333333333444455555555555555555555555555554443
No 150
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=68.03 E-value=12 Score=31.90 Aligned_cols=26 Identities=31% Similarity=0.452 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQ 301 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~ 301 (394)
.-+|+|..++..|+-||..|+.+|..
T Consensus 8 ~t~EeLaaeL~kLqmENK~LKkkl~~ 33 (110)
T 2oa5_A 8 KTYEEMVKEVERLKLENKTLKQKVKS 33 (110)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45799999999999999999999873
No 151
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=67.77 E-value=2.4 Score=40.07 Aligned_cols=9 Identities=33% Similarity=0.449 Sum_probs=3.8
Q ss_pred hhhhhhhcC
Q 016182 376 AKLHQLLDA 384 (394)
Q Consensus 376 ~kl~qll~~ 384 (394)
.||-+|+|+
T Consensus 240 ~~lw~l~~~ 248 (250)
T 2ve7_C 240 DYLWSLVDT 248 (250)
T ss_dssp HHHHTCC--
T ss_pred HHHHHHhcc
Confidence 455555553
No 152
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=67.43 E-value=28 Score=32.26 Aligned_cols=47 Identities=15% Similarity=0.039 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+++++|+.++..|+.....+..++..+..+...++.+...+++++..
T Consensus 32 ~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~ 78 (256)
T 3na7_A 32 KDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIAS 78 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444444444444444444433
No 153
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=67.00 E-value=16 Score=30.74 Aligned_cols=66 Identities=21% Similarity=0.291 Sum_probs=20.3
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHH-------------HHHH---HHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q 016182 259 RKQSNRESARRSRLRKQAEAEELSRKVD-------------SLID---ENASLKSEINQLSE---NSEKLRQENAALLEK 319 (394)
Q Consensus 259 Rk~sNRESARRSR~RKq~~leeLe~rV~-------------~L~~---EN~~L~~ei~~L~e---e~~~L~~EN~~Lr~~ 319 (394)
|+..--.+-|+-|.+=...+.+|..-|- .|.. -...|+.++..|.+ +...|+.+|..|..+
T Consensus 27 kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~~~~~k~~Ka~IL~~aieYIk~Lq~~~~~l~~~~~~~~~l~~~n~~L~~r 106 (118)
T 4ati_A 27 KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDLENRQKKLEHANRHLLLR 106 (118)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHSCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC---------------
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333345555555555566666655332 2222 22345555555543 356688889999988
Q ss_pred HHHhh
Q 016182 320 LKSAQ 324 (394)
Q Consensus 320 L~~lq 324 (394)
|++|+
T Consensus 107 iqeLE 111 (118)
T 4ati_A 107 VQELE 111 (118)
T ss_dssp -----
T ss_pred HHHHH
Confidence 88764
No 154
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=66.99 E-value=23 Score=30.62 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
.++|+.++..|+..|..|..++..++.++..|
T Consensus 52 ~~eL~~~~~~Le~~n~~L~~~lke~~~~~~~l 83 (155)
T 2oto_A 52 AEELEKAKQALEDQRKDLETKLKELQQDYDLA 83 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888888888888888888877777444
No 155
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=66.66 E-value=11 Score=31.56 Aligned_cols=29 Identities=21% Similarity=0.425 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.|+.+|..|+.++..|+.++..|..+|..
T Consensus 16 ~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 16 TLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444455555544
No 156
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=66.53 E-value=51 Score=26.78 Aligned_cols=25 Identities=12% Similarity=0.314 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L 302 (394)
+++|+.+-+.|..+...|..+...|
T Consensus 27 L~~lEke~~~l~~el~~le~E~~~L 51 (96)
T 3q8t_A 27 LEDVEKNRKVVAENLEKVQAEAERL 51 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333
No 157
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=65.68 E-value=4.1 Score=26.44 Aligned_cols=24 Identities=33% Similarity=0.415 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 286 DSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 286 ~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
..|+.||..|..+|..|+++...|
T Consensus 3 dalefendaleqkiaalkqkiasl 26 (28)
T 3ra3_A 3 DALEFENDALEQKIAALKQKIASL 26 (28)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHhccHHHHHHHHHHHHHHHHh
Confidence 456677777777776666655544
No 158
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=65.07 E-value=25 Score=29.71 Aligned_cols=46 Identities=20% Similarity=0.260 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.-|..++..++.+...|..++..|+..+..|+.|-...=.+|..+.
T Consensus 7 ~al~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIE 52 (106)
T 4e61_A 7 VAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIE 52 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555666666666666666666666666666666553
No 159
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=64.87 E-value=49 Score=26.48 Aligned_cols=52 Identities=21% Similarity=0.284 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 273 RKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 273 RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
..+++++.|.+--+.|..=-+.|..-|.+|.++...|......|+.+..++.
T Consensus 22 q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~ 73 (78)
T 3iv1_A 22 RAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELS 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777777777777777777888888888888888888888888887764
No 160
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=64.86 E-value=6 Score=26.17 Aligned_cols=22 Identities=27% Similarity=0.274 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 016182 302 LSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 302 L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
|..-+..|+.||.+|++++.++
T Consensus 4 lnallasleaenkqlkakveel 25 (31)
T 1p9i_A 4 LNALLASLEAENKQLKAKVEEL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344567888999999988775
No 161
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=64.44 E-value=7.9 Score=35.71 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQE 312 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~E 312 (394)
+..|..++..|..++.....+|..|++++..|+.+
T Consensus 22 V~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~ 56 (190)
T 4emc_A 22 VANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQ 56 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444544444444444444444444444444433
No 162
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=63.96 E-value=38 Score=26.58 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+.+.+...+..|+.+...++.++....+++..|..=.-.|-.+|...+
T Consensus 6 e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYR 53 (74)
T 2xv5_A 6 ERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYR 53 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666666666666676666667666666566666665553
No 163
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=63.91 E-value=19 Score=27.26 Aligned_cols=26 Identities=23% Similarity=0.299 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
..|..+|++|+..+.....||.+|..
T Consensus 21 ~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 21 VQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888899998888888888888754
No 164
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=63.58 E-value=9.3 Score=37.03 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAAL 316 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~L 316 (394)
+.+++.|+.+|+.|..++++|+++.+.+...|.+.
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k~n~~r 218 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANKANAER 218 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH
Confidence 45666666666666666777666665555544433
No 165
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=63.48 E-value=58 Score=26.33 Aligned_cols=48 Identities=19% Similarity=0.153 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..+.+.|+.++..++.++..+-.+|..|+.++..|..+...+..+|..
T Consensus 22 ~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~ 69 (101)
T 3u59_A 22 IDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKE 69 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555555555555555555555555544444444443
No 166
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=63.18 E-value=35 Score=27.56 Aligned_cols=10 Identities=40% Similarity=0.424 Sum_probs=4.2
Q ss_pred HHHHHHHHHH
Q 016182 311 QENAALLEKL 320 (394)
Q Consensus 311 ~EN~~Lr~~L 320 (394)
.|...|+.+|
T Consensus 54 ~El~~Lq~qL 63 (81)
T 3qh9_A 54 AEVAQLQEQV 63 (81)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444444
No 167
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=63.02 E-value=5.1 Score=32.04 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L 302 (394)
|.|..++..|...|..|..|+..|
T Consensus 18 evLKe~I~EL~e~~~qLE~EN~~L 41 (78)
T 1dip_A 18 EILKEQIRELVEKNSQLERENTLL 41 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444433
No 168
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=62.60 E-value=11 Score=31.78 Aligned_cols=22 Identities=23% Similarity=0.436 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEIN 300 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~ 300 (394)
..|+.+++.|+..+..|...|.
T Consensus 46 q~L~~el~~l~~~~~~LE~~l~ 67 (129)
T 3tnu_B 46 QRLRAEIDNVKKQCANLQNAIA 67 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHH
Confidence 3344444444444444444433
No 169
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=62.55 E-value=30 Score=25.62 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 284 KVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
++.+|..+.+.|..+|..|..+...|..+...-+
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak 38 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAARSDAQAAK 38 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555554444444444333
No 170
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=62.13 E-value=47 Score=26.43 Aligned_cols=40 Identities=20% Similarity=0.262 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEK 319 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~ 319 (394)
.|..+...|..+.......+..|...-..|+.....|.++
T Consensus 46 ~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~~r 85 (89)
T 3bas_A 46 TLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLKKL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333334444444444333
No 171
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=61.88 E-value=51 Score=25.80 Aligned_cols=53 Identities=19% Similarity=0.114 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 269 RSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 269 RSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+-|...+..+..|+.++..++.+-.....+...|-.-...|..|....|.-|.
T Consensus 5 ~e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLE 57 (74)
T 2xv5_A 5 RERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLE 57 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566677788888888888888888888888887777788888888876664
No 172
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=61.09 E-value=23 Score=34.85 Aligned_cols=44 Identities=14% Similarity=-0.011 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
++..||..|...+.+...|+..+..++.++..|..+...|+.++
T Consensus 13 ~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~~ 56 (323)
T 1lwu_C 13 EVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTC 56 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555665566666666666666555555555555555444
No 173
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=60.87 E-value=17 Score=24.99 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+|..++..|-.+...|+.|...||+-|
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 344445555555555555555555433
No 174
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=60.74 E-value=15 Score=31.53 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
+|..+|+.|..++..|..++..|+++
T Consensus 29 ~l~~~v~~l~~e~k~l~ke~~~l~~~ 54 (171)
T 2zvf_A 29 KLPKTVERFFEEWKDQRKEIERLKSV 54 (171)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555555554443
No 175
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=60.55 E-value=34 Score=24.51 Aligned_cols=24 Identities=29% Similarity=0.385 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 299 INQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 299 i~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+..|..+++.|+.....|+.+|+.
T Consensus 22 laaleselqalekklaalksklqa 45 (48)
T 1g6u_A 22 LAALESELQALEKKLAALKSKLQA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555555555555543
No 176
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.45 E-value=15 Score=37.04 Aligned_cols=43 Identities=14% Similarity=0.220 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
.++..|+++++.|..++..|+.++..+++++..++.|...|+.
T Consensus 49 ~~lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee~~~l~~ 91 (428)
T 4b4t_K 49 FKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQS 91 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4566788888888899999999999999999888888877764
No 177
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=60.30 E-value=64 Score=25.79 Aligned_cols=54 Identities=22% Similarity=0.300 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 271 RLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 271 R~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
|+|=++.+..-..+++.|+.-...|..--..|..-+.+|..|-..|...+..++
T Consensus 13 Rrrl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk 66 (78)
T 3iv1_A 13 RWRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLK 66 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456677777777777777777777777777777777777777777776654
No 178
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=59.95 E-value=30 Score=25.18 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 287 SLIDENASLKSEINQLSENSEKLRQ 311 (394)
Q Consensus 287 ~L~~EN~~L~~ei~~L~ee~~~L~~ 311 (394)
+|+..-+.|.+-|..|+.+...|+.
T Consensus 21 qlerdeqnlekiianlrdeiarlen 45 (52)
T 3he5_B 21 QLERDEQNLEKIIANLRDEIARLEN 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444433
No 179
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=59.26 E-value=34 Score=34.72 Aligned_cols=25 Identities=16% Similarity=0.275 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 297 SEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 297 ~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
.++..|++++..|+.+...|.++|.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (455)
T 2dq0_A 76 AKSREIVKRIGELENEVEELKKKID 100 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444444444444444443
No 180
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=59.22 E-value=22 Score=32.58 Aligned_cols=28 Identities=14% Similarity=0.010 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
.++-|-..+..|+.+|.+|..++.+|+.
T Consensus 146 lid~~ld~~~~L~~~n~~LqkeNeRL~~ 173 (184)
T 3w03_C 146 LICYCLDTIAENQAKNEHLQKENERLLR 173 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444433
No 181
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=59.09 E-value=66 Score=26.09 Aligned_cols=38 Identities=21% Similarity=0.325 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 263 NRESARRSRLRKQ--AEAEELSRKVDSLIDENASLKSEIN 300 (394)
Q Consensus 263 NRESARRSR~RKq--~~leeLe~rV~~L~~EN~~L~~ei~ 300 (394)
.++..+.-.+|++ .+++.-..+++.|+.+...++..|.
T Consensus 36 qkekEqL~~LKkkl~~el~~h~~ei~~le~~i~rhk~~i~ 75 (84)
T 1gmj_A 36 ARAKEQLAALKKHKENEISHHAKEIERLQKEIERHKQSIK 75 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445544 3333333334433333333333333
No 182
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=59.02 E-value=72 Score=32.95 Aligned_cols=12 Identities=17% Similarity=0.338 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q 016182 310 RQENAALLEKLK 321 (394)
Q Consensus 310 ~~EN~~Lr~~L~ 321 (394)
..|-..|+++|+
T Consensus 122 ~~~~~~l~~~i~ 133 (501)
T 1wle_A 122 RARGREIRKQLT 133 (501)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 183
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=58.96 E-value=34 Score=35.35 Aligned_cols=50 Identities=20% Similarity=0.333 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 272 LRKQAEAEELSRKVDSLIDENAS----------LKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 272 ~RKq~~leeLe~rV~~L~~EN~~----------L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+.-+.++++|+.+.+.+..+... |..++..|++++..|+.+...|.++|.
T Consensus 43 r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~ 102 (485)
T 3qne_A 43 VKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLR 102 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455555555544444432 333444444444444444444444443
No 184
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=58.63 E-value=8.4 Score=28.26 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEI 299 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei 299 (394)
.+++.|+.++..|+.+...|...|
T Consensus 44 ~~~~~L~~ri~~Le~~l~~l~~~l 67 (70)
T 1zme_C 44 KYLQQLQKDLNDKTEENNRLKALL 67 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468888888888888777776654
No 185
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=57.85 E-value=29 Score=25.81 Aligned_cols=45 Identities=24% Similarity=0.331 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+++..+..|+.+...++.++....+++..|..=.-.|-.+|...
T Consensus 3 ~~~q~~i~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EIatY 47 (59)
T 1gk6_A 3 KQLEDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATY 47 (59)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 456666777777777777777777777776665555555555544
No 186
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=57.49 E-value=85 Score=26.34 Aligned_cols=46 Identities=15% Similarity=0.246 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
++|+..++++..=..|-.++..+++.|-.++-.|+.|...|+.-++
T Consensus 62 aRlnsqQrQI~ENhkEMKq~aaqsaaLlsk~yh~ene~ar~kkl~~ 107 (114)
T 2xzr_A 62 ARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKKLIK 107 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4455555555555555555555555555555556655555554443
No 187
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=57.43 E-value=1e+02 Score=27.24 Aligned_cols=43 Identities=30% Similarity=0.375 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 282 SRKVDSLIDENASLKSEIN-------QLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~-------~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
..-|+.|+.-.-.|++++. .....+++|..||..++++|.+.+
T Consensus 111 DsMVe~LT~TiG~LrKELEdEklK~~E~MdSFE~LkvENE~vkerl~mYR 160 (167)
T 4gkw_A 111 DSMVESLTETIGILRKELENEKLKAAENMDSFEKLSMENENLKEKIAHYR 160 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHH
Confidence 3446666666666666654 333557889999999999999874
No 188
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=57.36 E-value=72 Score=26.36 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=40.1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHh
Q 016182 261 QSNRESARRSRLRKQAEAEELSRKVDSLI---DENASLKSEINQLSENSE-------KLRQENAALLEKLKSA 323 (394)
Q Consensus 261 ~sNRESARRSR~RKq~~leeLe~rV~~L~---~EN~~L~~ei~~L~ee~~-------~L~~EN~~Lr~~L~~l 323 (394)
..|-.+|-..=..|+..+++|...+..++ ..+..|+.++...++.+. ++-.|...|..+|..+
T Consensus 8 ~~~L~~aEeaL~~kq~~id~lke~~~q~~~~~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~l 80 (94)
T 3jsv_C 8 RQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQL 80 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34556677777778888888888888777 556667777766654443 3334444455555444
No 189
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=57.25 E-value=15 Score=36.98 Aligned_cols=41 Identities=22% Similarity=0.200 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEK 319 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~ 319 (394)
++|+++++.++.++..|..++.....+..+|-.+...|+..
T Consensus 20 ~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gn 60 (412)
T 3u06_A 20 EELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDN 60 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44444444444444444444444444444444444444443
No 190
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=56.49 E-value=36 Score=28.25 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSE 307 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~ 307 (394)
+.|+.+++.|+.....|+.++..+.+...
T Consensus 98 ~~l~~~~~~l~~~l~~l~~~i~~~~~~l~ 126 (133)
T 1fxk_C 98 NELESTLQKMGENLRAITDIMMKLSPQAE 126 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444333
No 191
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=56.39 E-value=25 Score=24.42 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+|..+++.|..+...|+.|-..|+.-|.
T Consensus 5 QLE~KVEeLl~~~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 5 QLKAKVEELKSKLWHLKNKVARLKKKNA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 4445555555555556666666665554
No 192
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=56.26 E-value=30 Score=26.88 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 300 NQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 300 ~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..|++++++|..|...|...|..
T Consensus 35 aKL~Rk~DKl~~ele~l~~~l~~ 57 (65)
T 3sja_C 35 TKNNRKLDSLDKEINNLKDEIQS 57 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 46778888888888888887764
No 193
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=55.82 E-value=42 Score=30.17 Aligned_cols=15 Identities=27% Similarity=0.313 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHH
Q 016182 308 KLRQENAALLEKLKS 322 (394)
Q Consensus 308 ~L~~EN~~Lr~~L~~ 322 (394)
+|..|...|+.+|..
T Consensus 117 aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 117 AVAKEMESLGQKLDE 131 (175)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344444444433
No 194
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=55.81 E-value=42 Score=32.02 Aligned_cols=54 Identities=15% Similarity=0.196 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQLGNK 328 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lql~~~ 328 (394)
..++.||..+++.|..--..+..+|..|.+.=..|+.+...++.+|..+|.-.+
T Consensus 176 ~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief~qEy~l 229 (242)
T 3uux_B 176 LSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFLEEYGL 229 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhch
Confidence 568899999999999999999999999999999999999999999998875443
No 195
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=55.57 E-value=6.3 Score=33.53 Aligned_cols=24 Identities=33% Similarity=0.526 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 299 INQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 299 i~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
++.|..++.+|..||..||.+|..
T Consensus 10 ~EeLaaeL~kLqmENK~LKkkl~~ 33 (110)
T 2oa5_A 10 YEEMVKEVERLKLENKTLKQKVKS 33 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456777788889999999999975
No 196
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=55.25 E-value=42 Score=33.49 Aligned_cols=45 Identities=13% Similarity=0.080 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+++++|+.+++.|+.++..|..++........+|-.+...|+..+
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnI 61 (403)
T 4etp_A 17 EKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNI 61 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 344555555555555555555555555555555555555555444
No 197
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=54.83 E-value=18 Score=28.24 Aligned_cols=32 Identities=19% Similarity=0.319 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 273 RKQAEAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 273 RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
.|.+.+.+||..+..-..++.+|+.++.+++.
T Consensus 22 ~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs 53 (67)
T 1zxa_A 22 LKEERIKELEKRLSEKEEEIQELKRKLHKCQS 53 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777788888877777777777766666543
No 198
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=54.78 E-value=46 Score=33.33 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.|+.++..|++++..|+.+...|.++|..
T Consensus 68 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (421)
T 1ses_A 68 ALIARGKALGEEAKRLEEALREKEARLEA 96 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555555555544
No 199
>2lz1_A Nuclear factor erythroid 2-related factor 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=54.54 E-value=0.28 Score=40.46 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHHH
Q 016182 254 LKRERRKQSNRESARRSRLRKQ 275 (394)
Q Consensus 254 ~KR~RRk~sNRESARRSR~RKq 275 (394)
.+..||+-+||.+|+++|.||.
T Consensus 65 IrdiRRRgKNkvAAqnCRKRKl 86 (90)
T 2lz1_A 65 IRDIRRRGKNKVAAQNCRKRKL 86 (90)
T ss_dssp HHHHHHHSCSCCCCCCCSCCCC
T ss_pred HHHHHHhhhhHHHHHHcchhhc
Confidence 4678899999999999999985
No 200
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=54.29 E-value=44 Score=26.75 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 287 SLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 287 ~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.|+.....|..+|..|..++..+..+...|+.+|..+
T Consensus 74 ~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~~ 110 (117)
T 2zqm_A 74 ELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQSA 110 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555556666666666666666666666666554
No 201
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=53.61 E-value=14 Score=31.26 Aligned_cols=23 Identities=22% Similarity=0.397 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQ 301 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~ 301 (394)
..|+.+++.|+..+..|...|..
T Consensus 48 q~L~~el~~l~~~~~sLE~~l~e 70 (131)
T 3tnu_A 48 QNLEIELQSQLSMKASLENSLEE 70 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHH
Confidence 33444444444444444444433
No 202
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=53.49 E-value=18 Score=23.87 Aligned_cols=25 Identities=24% Similarity=0.345 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L 302 (394)
.+.|+.++..|+...+.|.++++.|
T Consensus 3 wealekkcaalesklqalekkleal 27 (31)
T 3ljm_A 3 WEALEKKCAALESKLQALEKKLEAL 27 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666655555555544
No 203
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=53.20 E-value=13 Score=27.51 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 300 NQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 300 ~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
..+.+.+..|..||..|+.+|..++
T Consensus 30 d~v~~~~~~l~~e~~~L~~~~~~l~ 54 (57)
T 2wuj_A 30 AQVRKDYEIVLRKKTELEAKVNELD 54 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666777777777776543
No 204
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=52.99 E-value=36 Score=27.52 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHh
Q 016182 308 KLRQENAALLEKLKSA 323 (394)
Q Consensus 308 ~L~~EN~~Lr~~L~~l 323 (394)
.|+..|+.|.-++++|
T Consensus 60 ~le~~n~~l~~riqEL 75 (83)
T 4ath_A 60 KLEHANRHLLLRVQEL 75 (83)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HhhhhhHHHHHHHHHH
Confidence 3555555555555554
No 205
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=52.80 E-value=32 Score=33.80 Aligned_cols=38 Identities=26% Similarity=0.164 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 284 KVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
++..|+........+|..|+..+..+......|+++|.
T Consensus 13 ~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~ 50 (323)
T 1lwu_C 13 EVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLV 50 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334444444444444444444444443
No 206
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=52.53 E-value=35 Score=27.02 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
..++.|+..+++.|..--+-+..+|+.|.+.=..|+.+...+..+|..+|
T Consensus 20 ~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~q 69 (72)
T 2xu6_A 20 MSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFLE 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 35677788888888777777777777777776677776667766666554
No 207
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=52.28 E-value=83 Score=27.96 Aligned_cols=19 Identities=21% Similarity=0.239 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 016182 305 NSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 305 e~~~L~~EN~~Lr~~L~~l 323 (394)
+...++..|..|+.+|.+.
T Consensus 109 ~~~~~e~r~~~L~~ql~e~ 127 (154)
T 2ocy_A 109 EKYAIEILNKRLTEQLREK 127 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555443
No 208
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=52.23 E-value=1e+02 Score=25.69 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 290 DENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 290 ~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.+...|++.+..+.-....|+.+...|+++|.-+.
T Consensus 69 ~di~~lrK~lD~~~l~r~dLE~~iesL~eEl~FLK 103 (119)
T 3ol1_A 69 NTLQSFRQDVDNASLARLDLERKVESLQEEIAFLK 103 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444433333445555566666555443
No 209
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=52.11 E-value=33 Score=34.76 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
.++.++|++++..|+.....-...|..|+.-++.++.+.+.|...|
T Consensus 112 ~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 112 KQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556677777777766655544466666666666666666666665
No 210
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=51.81 E-value=29 Score=32.32 Aligned_cols=50 Identities=20% Similarity=0.274 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhcc
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQLGNKQEIVLN 334 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lql~~~~E~~~~ 334 (394)
+.+|+++--....+.+.|+....+|.+||..|+..|+.+.=...+.+.+.
T Consensus 32 ~~~~~a~~~s~~s~~~dl~~s~~~l~ae~~~L~~~l~kLeGn~se~ITfe 81 (206)
T 3oa7_A 32 LQQLRVNYGSFVSEYNDLTKSHNTLSKELDNLRSRFGNLEGNTSERITIK 81 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCGGGCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHccCCHHhccCHH
Confidence 45666666777777888888888899999999999999875555555443
No 211
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=51.66 E-value=1.1e+02 Score=25.74 Aligned_cols=41 Identities=22% Similarity=0.383 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 281 LSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
.+.++..|......|..+|..+..++...+..|..|...-.
T Consensus 67 ~EE~~~~L~~~k~eLe~~l~el~~rleeeee~~~~L~~~kk 107 (129)
T 2fxo_A 67 AEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKR 107 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444444444444444443333
No 212
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=51.16 E-value=13 Score=24.16 Aligned_cols=10 Identities=60% Similarity=0.730 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 016182 291 ENASLKSEIN 300 (394)
Q Consensus 291 EN~~L~~ei~ 300 (394)
.|..|+.+|.
T Consensus 8 knarlkqeia 17 (28)
T 3ra3_B 8 KNARLKQEIA 17 (28)
T ss_dssp HHHHHHHHHH
T ss_pred hhhHHHHHHH
Confidence 3333333333
No 213
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=50.62 E-value=19 Score=28.80 Aligned_cols=35 Identities=37% Similarity=0.599 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQ 311 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~ 311 (394)
++++|..++..|..+|..|..++..++...+.++.
T Consensus 1 Ei~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~ 35 (86)
T 3swk_A 1 EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLRE 35 (86)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
No 214
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=50.50 E-value=1e+02 Score=32.37 Aligned_cols=16 Identities=38% Similarity=0.727 Sum_probs=7.1
Q ss_pred cccCCCCCccccCCCCCC
Q 016182 198 PTSVSGKPVGPVLSPGMP 215 (394)
Q Consensus 198 p~~~~g~~vg~v~~p~~~ 215 (394)
|+..+|....+| ||++
T Consensus 213 pTarPgVysa~v--PG~p 228 (551)
T 2b5u_A 213 PTERPGVFTASI--PGAP 228 (551)
T ss_dssp ECSSTTCEEECC--TTSC
T ss_pred ccCCCceEEecc--CCCC
Confidence 344444443343 5554
No 215
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=50.08 E-value=14 Score=37.29 Aligned_cols=44 Identities=25% Similarity=0.312 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+|..+...|+.|...|+.++.++..++..|..+...+++++..+
T Consensus 29 ~l~~r~~~le~e~~~l~~e~~r~~~e~~~~~~~~~~~~~~i~~~ 72 (434)
T 4b4t_M 29 ELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIKDNKEKIKNN 72 (434)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444444445555555555555555555555666666666654
No 216
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=50.02 E-value=1.7e+02 Score=29.26 Aligned_cols=17 Identities=35% Similarity=0.245 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHh
Q 016182 307 EKLRQENAALLEKLKSA 323 (394)
Q Consensus 307 ~~L~~EN~~Lr~~L~~l 323 (394)
..|..+-..|+++|+.+
T Consensus 67 ~~l~~~~~~~~~~~~~~ 83 (421)
T 1ses_A 67 EALIARGKALGEEAKRL 83 (421)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44555555555555544
No 217
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=49.78 E-value=1.5e+02 Score=30.87 Aligned_cols=46 Identities=20% Similarity=0.203 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
++.++|+.++..|+.....-...|..|+..++.++.+.+.|..-|.
T Consensus 111 e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~ 156 (491)
T 1m1j_A 111 HVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDID 156 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666666555444335555555555555555555555543
No 218
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=49.66 E-value=46 Score=30.41 Aligned_cols=33 Identities=24% Similarity=0.207 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSE 307 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~ 307 (394)
...+.+|..++..|+.+|.+|+.+.+...++++
T Consensus 151 ld~~~~L~~~n~~LqkeNeRL~~E~n~~l~qlE 183 (184)
T 3w03_C 151 LDTIAENQAKNEHLQKENERLLRDWNDVQGRFE 183 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445566777777777777777777766655443
No 219
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=49.61 E-value=98 Score=24.97 Aligned_cols=45 Identities=29% Similarity=0.325 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLK-------SEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~-------~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+++.+|.-+|..|+.|-.+.. .+|..|++++..-..|...|..+|
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ei~rL~~~l 77 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKDAEIERLHSQL 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 344555555555544444333 344444444444444444444444
No 220
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=49.46 E-value=52 Score=34.00 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.|..++..|++++..|+.+..+|.++|..
T Consensus 120 ~l~~~~~~l~~~i~~l~~~~~~~~~~l~~ 148 (501)
T 1wle_A 120 SLRARGREIRKQLTLLYPKEAQLEEQFYL 148 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555555555555544
No 221
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=49.31 E-value=38 Score=23.51 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 295 LKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
|..++..|-.+...|+.|-..|+.-|.
T Consensus 6 LE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 6 LEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 444444444444445555555555444
No 222
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=49.19 E-value=63 Score=29.12 Aligned_cols=11 Identities=45% Similarity=0.462 Sum_probs=5.0
Q ss_pred HHHHHHHHHHh
Q 016182 313 NAALLEKLKSA 323 (394)
Q Consensus 313 N~~Lr~~L~~l 323 (394)
|..|+.+|..+
T Consensus 199 n~~L~~eLp~l 209 (251)
T 2fic_A 199 NVDLQEELPSL 209 (251)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 223
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=48.83 E-value=97 Score=24.43 Aligned_cols=43 Identities=28% Similarity=0.401 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
||+++++|-.-|. .|+.++....+-+.+|+.++.-++..+..+
T Consensus 15 Kq~EI~rLnvlvg-------slR~KLiKYtelnKKLe~~~~~~q~s~~~l 57 (74)
T 2q6q_A 15 KQNEIFELKKIAE-------TLRSKLEKYVDITKKLEDQNLNLQIKISDL 57 (74)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Confidence 4455555444444 455566666666666777766666666554
No 224
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=48.30 E-value=40 Score=27.30 Aligned_cols=29 Identities=34% Similarity=0.461 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
++-+.|..+|+.|+.|+..|+.++..|++
T Consensus 46 ~EN~~Lh~~ie~l~eEi~~lk~en~eL~e 74 (83)
T 1uii_A 46 KENEKLHKEIEQKDNEIARLKKENKELAE 74 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44456666666666666666666666654
No 225
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=48.11 E-value=38 Score=26.20 Aligned_cols=18 Identities=28% Similarity=0.213 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 016182 271 RLRKQAEAEELSRKVDSL 288 (394)
Q Consensus 271 R~RKq~~leeLe~rV~~L 288 (394)
|.+=...+++|..-|=.+
T Consensus 24 R~~in~~f~~Lr~lvP~~ 41 (80)
T 1hlo_A 24 RDHIKDSFHSLRDSVPSL 41 (80)
T ss_dssp HHHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHCcCC
Confidence 333355566666655443
No 226
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=47.86 E-value=1.7e+02 Score=30.08 Aligned_cols=9 Identities=33% Similarity=0.394 Sum_probs=5.2
Q ss_pred hhhhhhhcC
Q 016182 376 AKLHQLLDA 384 (394)
Q Consensus 376 ~kl~qll~~ 384 (394)
.+||+|-..
T Consensus 301 e~ih~LT~~ 309 (464)
T 1m1j_B 301 DKISQLTKI 309 (464)
T ss_dssp HHHHHHHTT
T ss_pred cceeeccCC
Confidence 466766543
No 227
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=47.83 E-value=84 Score=29.52 Aligned_cols=41 Identities=17% Similarity=0.292 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAAL 316 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~L 316 (394)
+++..|+++++..+.|++.+...+.+.+++..+|+.....+
T Consensus 178 ~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~~ 218 (228)
T 3q0x_A 178 GTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKH 218 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 35678888888888888888888888777666665544433
No 228
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=47.22 E-value=76 Score=22.80 Aligned_cols=23 Identities=35% Similarity=0.361 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 285 VDSLIDENASLKSEINQLSENSE 307 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~ 307 (394)
|.+|+.|...|..+.+.|+.++.
T Consensus 5 vaqlenevaslenenetlkkknl 27 (49)
T 3he5_A 5 VAQLENEVASLENENETLKKKNL 27 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccHHHHHhcc
Confidence 44455554444444444444433
No 229
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=47.13 E-value=1.3e+02 Score=25.32 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
.+...+..|+.+...++.++....++|..|.
T Consensus 81 ~~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll 111 (131)
T 3tnu_A 81 QIQEMIGSVEEQLAQLRCEMEQQNQEYKILL 111 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444444444443
No 230
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=46.92 E-value=41 Score=27.21 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENS 306 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~ 306 (394)
.+++.+++.+...|+..|..|..+|.+|..++
T Consensus 48 ~~r~~e~e~r~k~le~~n~~l~~riqELE~qa 79 (83)
T 4ath_A 48 QQRAKDLENRQKKLEHANRHLLLRVQELEMQA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 35566777788888888888888888775543
No 231
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=46.89 E-value=1.1e+02 Score=24.27 Aligned_cols=49 Identities=16% Similarity=0.159 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
...++.+...+..|+.+...++.++....++|..|..=.-.|-.+|...
T Consensus 27 ~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatY 75 (86)
T 1x8y_A 27 ARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAY 75 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4456777777777777777777777777777777665555555555544
No 232
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=46.88 E-value=1.3e+02 Score=25.19 Aligned_cols=11 Identities=18% Similarity=0.256 Sum_probs=4.8
Q ss_pred hHHHHHHHHHH
Q 016182 251 ERELKRERRKQ 261 (394)
Q Consensus 251 ErE~KR~RRk~ 261 (394)
..|....||.+
T Consensus 35 k~Ei~elrr~i 45 (129)
T 3tnu_B 35 KHEISEMNRMI 45 (129)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444433
No 233
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=46.83 E-value=23 Score=30.32 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 293 ASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 293 ~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
..|..++..|.+++..|+.|+..|+.++...
T Consensus 28 ~~l~~~v~~l~~e~k~l~ke~~~l~~~~a~~ 58 (171)
T 2zvf_A 28 AKLPKTVERFFEEWKDQRKEIERLKSVIADL 58 (171)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888888888888888888877654
No 234
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=46.66 E-value=66 Score=29.24 Aligned_cols=29 Identities=7% Similarity=0.074 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
++.|..|+.+|..|..++...++++..+.
T Consensus 134 ertV~kLqkeiD~LEDeL~~eKek~k~i~ 162 (175)
T 3mud_A 134 LDTTAKNEKSIDDLEEKVAHAKEENLNMH 162 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444443
No 235
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=46.39 E-value=78 Score=39.94 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 287 SLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 287 ~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.++.+...|..+|+.|+++++.+..|...|+.++..
T Consensus 2032 ~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~ 2067 (3245)
T 3vkg_A 2032 EIVATITALEKSIATYKEEYATLIRETEQIKTESSK 2067 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445555555555555555555555543
No 236
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=46.32 E-value=69 Score=26.90 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLRQENAAL 316 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~L 316 (394)
.|-++.-..+.|...|+.++..|+..++..+.-...|
T Consensus 8 ~~~~~~~~~e~e~~~l~~~~~el~~~l~~~~~~~~e~ 44 (125)
T 1joc_A 8 ALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQEL 44 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555555555555555555444433333
No 237
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=46.05 E-value=78 Score=24.90 Aligned_cols=28 Identities=21% Similarity=0.431 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
...|..|..|+..|..++..+.+++..+
T Consensus 3 ~k~v~~l~~E~eel~~klk~~~ee~~~~ 30 (71)
T 1uix_A 3 TSDVANLANEKEELNNKLKEAQEQLSRL 30 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444433
No 238
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=45.34 E-value=87 Score=24.61 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
+|...|..|..|+..|..++..+.+++..+.
T Consensus 3 ~L~k~i~~l~~E~eel~~klk~~~ee~~~~~ 33 (71)
T 1s1c_X 3 MLTKDIEILRRENEELTEKMKKAEEEYKLEK 33 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666677777777777776666666665554
No 239
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=45.15 E-value=54 Score=30.85 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
..+..++..|+...+.++.|++.++.++.+.+.+..+||++-
T Consensus 174 ~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~ 215 (228)
T 3q0x_A 174 SEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQY 215 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444444444443
No 240
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=44.92 E-value=81 Score=29.15 Aligned_cols=50 Identities=22% Similarity=0.291 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 271 RLRKQAEAEELSRKVDSLID-------ENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 271 R~RKq~~leeLe~rV~~L~~-------EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
|.+|+--++....+++.|+. .......++...++.++.| |..|+++|-.+
T Consensus 139 R~~KllDYD~~~~k~~kL~~K~~kd~~kl~kae~el~~Ak~~Ye~l---N~~L~eELP~l 195 (243)
T 4a3a_A 139 RSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEF---NVDLQEELPSL 195 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 45555556666666665541 2222334444444444443 55666666443
No 241
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=44.91 E-value=1.1e+02 Score=38.61 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENA 293 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~ 293 (394)
+++.+.+|+.+++.|+.+-.
T Consensus 2033 ~~~~L~~le~~l~~L~~~~~ 2052 (3245)
T 3vkg_A 2033 IVATITALEKSIATYKEEYA 2052 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444333
No 242
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=44.62 E-value=78 Score=26.09 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 300 NQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 300 ~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..|++++++|..|...|+..|..
T Consensus 52 aKL~Rk~DKl~~ele~l~~~l~~ 74 (93)
T 3sjb_C 52 TKNNRKLDSLDKEINNLKDEIQS 74 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555544
No 243
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=44.62 E-value=45 Score=22.76 Aligned_cols=24 Identities=4% Similarity=0.198 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 295 LKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
|..+++.|-.+...|+.|-..||.
T Consensus 5 LEdKvEeLl~~~~~Le~EV~RLk~ 28 (33)
T 3c3g_A 5 IEXKLXEIXSKXYHXENXLARIKX 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334444444444444444444443
No 244
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=44.57 E-value=12 Score=27.76 Aligned_cols=22 Identities=18% Similarity=0.341 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLK 296 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~ 296 (394)
..++++|+.+|+.|+.....|.
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~l~ 69 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTNLT 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888888888777665543
No 245
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=44.46 E-value=1.2e+02 Score=24.98 Aligned_cols=50 Identities=14% Similarity=0.164 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.+.+.-|+.+|..++..-..=|.--+++.++.+.|..++..|+.++..+.
T Consensus 39 ~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq~q~~~L~ 88 (94)
T 3jsv_C 39 METVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKLK 88 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 47778888888888877777777777777777777777777777765554
No 246
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=43.54 E-value=44 Score=31.27 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=14.7
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSL---IDENASLKSEINQLSENS 306 (394)
Q Consensus 278 leeLe~rV~~L---~~EN~~L~~ei~~L~ee~ 306 (394)
+.+|+.++..| -.+|..+..++..|..++
T Consensus 81 ~~~Le~~L~~Li~~A~~Ne~l~~~~~~l~l~L 112 (252)
T 3e98_A 81 NIEMRHRLSQLMDVARENDRLFDKTRRLVLDL 112 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444333 345666666666655443
No 247
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=43.31 E-value=34 Score=25.20 Aligned_cols=35 Identities=29% Similarity=0.458 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQ 311 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~ 311 (394)
+-..||.-|..|+..|..|...|..|......|+.
T Consensus 18 enaklenivarlendnanlekdianlekdianler 52 (56)
T 3he4_A 18 ENAKLENIVARLENDNANLEKDIANLEKDIANLER 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 34456667777777777777777777666655543
No 248
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=43.11 E-value=88 Score=28.84 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
-++++..|..+++.|+.++..|..++.++...
T Consensus 137 ~~~~~~~L~~e~~~l~~~~~~l~~qlE~~v~~ 168 (213)
T 1ik9_A 137 NQAKNEHLQKENERLLRDWNDVQGRFEKAVSA 168 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555555555555554433
No 249
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=43.03 E-value=42 Score=34.05 Aligned_cols=43 Identities=12% Similarity=0.269 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Q 016182 281 LSRKVDSLIDENASLKSEINQLSE---NSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~e---e~~~L~~EN~~Lr~~L~~l 323 (394)
|..+++.|+++.+.+.++|..++. +...|..+-..|+++|+.+
T Consensus 43 ~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~ 88 (455)
T 2dq0_A 43 KLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGEL 88 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444443321 1233444444444444443
No 250
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=42.39 E-value=90 Score=22.79 Aligned_cols=26 Identities=23% Similarity=0.311 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 295 LKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
|..+|..|..++..-...+..+.+.|
T Consensus 17 Lek~ID~LEdeL~~eKek~~~i~~eL 42 (52)
T 2z5i_A 17 LKKLVDDLEDELYAQKLKYKAISEEL 42 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 33333333333333333444444444
No 251
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=42.32 E-value=61 Score=25.53 Aligned_cols=33 Identities=6% Similarity=0.174 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 289 IDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 289 ~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
......|..+|..|..+...+..+...|+.+|.
T Consensus 71 ~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~ 103 (107)
T 1fxk_A 71 QEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444444444444444444444443
No 252
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=42.29 E-value=43 Score=26.10 Aligned_cols=46 Identities=9% Similarity=0.170 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+.+++..+++.|+.|-.-.-.++..+.--|+..+.++..|..+|..
T Consensus 17 Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e~e~~~l~~~I~~ 62 (75)
T 3mtu_A 17 DKENALDRAEQAEADKDFYFGKLRNIELICQENEGENDPVLQRIVD 62 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4445555555555554444445555444444444444444444443
No 253
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=41.80 E-value=52 Score=22.56 Aligned_cols=24 Identities=8% Similarity=0.214 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 295 LKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
|..+++.|-.+...|+.|-..||.
T Consensus 6 LEdKVEeLl~~~~~Le~EV~RLk~ 29 (34)
T 3c3f_A 6 IEXKLEXILSXLYHXENEXARIXK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHH
Confidence 333444444444444444444443
No 254
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=41.71 E-value=13 Score=36.52 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+++..||.+|..++.+...|+..+..++.++..|......|..++
T Consensus 4 ~~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~~~i~~l~~~~ 48 (319)
T 1fzc_C 4 EEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQC 48 (319)
T ss_dssp ------CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455566667777776666666666666666666655555554444
No 255
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=41.13 E-value=39 Score=23.05 Aligned_cols=23 Identities=26% Similarity=0.261 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 016182 301 QLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 301 ~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+|..+++.|..+|..|..++..+
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RL 26 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARL 26 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHH
Confidence 34444444455555555544443
No 256
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=41.08 E-value=2.2e+02 Score=26.34 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 251 ERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDS 287 (394)
Q Consensus 251 ErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~ 287 (394)
++...+.-+.+..|+-|-+..+++++.++.|..++..
T Consensus 99 ~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~r 135 (235)
T 2odv_A 99 EKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQM 135 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677778889999999999999999999877763
No 257
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=40.90 E-value=1.6e+02 Score=24.55 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=33.7
Q ss_pred CccccchHHHHHHHHHHHhHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 245 ETWIQNERELKRERRKQSNRESARRSRLRK-------QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 245 e~~~~dErE~KR~RRk~sNRESARRSR~RK-------q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
..+..-|.+++..||.+- .+..-|.|= +..++++..+.+.-......+..++..|+..++.+..-...|.
T Consensus 13 ~~~~~ye~~I~~LR~qid---~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~~~l~r~dLE 89 (119)
T 3ol1_A 13 RLGDLYEEEMRELRRQVD---QLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLE 89 (119)
T ss_dssp CCTHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 344455666666665542 122222222 2233333333333333333444445555555555554455555
Q ss_pred HHHHHhh
Q 016182 318 EKLKSAQ 324 (394)
Q Consensus 318 ~~L~~lq 324 (394)
.++..|+
T Consensus 90 ~~iesL~ 96 (119)
T 3ol1_A 90 RKVESLQ 96 (119)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 258
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=40.61 E-value=98 Score=24.71 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 298 EINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 298 ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
++..|+.+...|..+...|+.++
T Consensus 79 ~i~~l~~~i~~l~~~~~~l~~~~ 101 (112)
T 1l8d_A 79 TLAKLIDRKSELERELRRIDMEI 101 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 259
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=40.51 E-value=94 Score=24.78 Aligned_cols=32 Identities=34% Similarity=0.383 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 292 NASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 292 N~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
...|..++..+..+...|..+...|..++..+
T Consensus 72 ~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~l 103 (117)
T 2zqm_A 72 VAELKEKIETLEVRLNALERQEKKLNEKLKEL 103 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555554
No 260
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=40.37 E-value=54 Score=22.49 Aligned_cols=27 Identities=19% Similarity=0.284 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+|..+++.|-.+...|+.|-..|+.-|
T Consensus 5 QLEdkVEeLl~~~~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 5 QLADAVEELASANYHLANAVARLAKAV 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 344445554444444555555555443
No 261
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=40.21 E-value=45 Score=22.27 Aligned_cols=25 Identities=20% Similarity=0.279 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 299 INQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 299 i~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+.+|..+..+.+.||-+|.+++..+
T Consensus 3 vaqlekevaqaeaenyqleqevaql 27 (33)
T 1fmh_A 3 VAQLEKEVAQAEAENYQLEQEVAQL 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 3444455555566666666666544
No 262
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=40.06 E-value=60 Score=23.24 Aligned_cols=31 Identities=23% Similarity=0.400 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
+|-++++..-.|...-..+|..|+.+...|+
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455444555455555555444444443
No 263
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.06 E-value=30 Score=34.81 Aligned_cols=43 Identities=19% Similarity=0.244 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
++++++++.++..+......|..+...| ..+...|++++..++
T Consensus 24 ~~~i~~~~~~~~~~~~~~~~l~~~~~~l-------~~~~~~~~~e~~~l~ 66 (405)
T 4b4t_J 24 EQKIQETELKIRSKTENVRRLEAQRNAL-------NDKVRFIKDELRLLQ 66 (405)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhc
Confidence 3455566666665555544454444444 444455555555553
No 264
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=39.93 E-value=21 Score=36.24 Aligned_cols=44 Identities=11% Similarity=0.101 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
++..++..|+........+|..|+..+..+......|+++|..+
T Consensus 88 kml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l 131 (409)
T 1m1j_C 88 KIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQL 131 (409)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33344444444444444455556665656666666666666555
No 265
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=39.77 E-value=37 Score=34.03 Aligned_cols=27 Identities=26% Similarity=0.473 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 296 KSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 296 ~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..++..|++++..|+.+...|.++|..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (425)
T 2dq3_A 74 QNRVKELKEEIDRLEEELRKVEEELKN 100 (425)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444455555555444443
No 266
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=39.60 E-value=72 Score=21.65 Aligned_cols=31 Identities=29% Similarity=0.310 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 293 ASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 293 ~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
..|+.++..|++++.-|.-....|++++..+
T Consensus 4 salkekvsalkeqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 4 SALKEKVSALKEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455566666666666666677777766543
No 267
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=39.35 E-value=59 Score=33.59 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSE---NSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~e---e~~~L~~EN~~Lr~~L~~l 323 (394)
.-+|..+++.|+++-+.+.++|..++. +...|..|-..|+++|+.+
T Consensus 42 ~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~l 90 (485)
T 3qne_A 42 WVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEI 90 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHH
Confidence 344555555666666666665555432 1234555555666665554
No 268
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=39.34 E-value=1.9e+02 Score=25.11 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=45.5
Q ss_pred HHHHHHHhHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 256 RERRKQSNRESARRSRLRKQ---------------AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 256 R~RRk~sNRESARRSR~RKq---------------~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
|.++.+-||.-+---|+.-. ..+++..+++..++.+......+......++..|+.+...+-..|
T Consensus 38 R~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~nl 117 (147)
T 2b9c_A 38 RGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNL 117 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777776665554432 234566666777777777777777777777777777777777777
Q ss_pred HHhh
Q 016182 321 KSAQ 324 (394)
Q Consensus 321 ~~lq 324 (394)
+.+.
T Consensus 118 KsLE 121 (147)
T 2b9c_A 118 KSLE 121 (147)
T ss_dssp HHHH
T ss_pred HhhH
Confidence 7654
No 269
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=39.30 E-value=24 Score=36.91 Aligned_cols=32 Identities=9% Similarity=0.197 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
.++|+.++.+++.+......++.+..+....|
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 368 (575)
T 2i1j_A 337 QQEYQDRLRQMQEEMERSQANLLEAQDMILRL 368 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 56777778777777777666665544433333
No 270
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=38.63 E-value=2e+02 Score=30.22 Aligned_cols=7 Identities=14% Similarity=0.795 Sum_probs=0.0
Q ss_pred CChhhhh
Q 016182 30 TDWAAMQ 36 (394)
Q Consensus 30 PDWs~mQ 36 (394)
..|+.=+
T Consensus 37 sGws~~~ 43 (551)
T 2b5u_A 37 SGWSSEN 43 (551)
T ss_dssp -------
T ss_pred CCcccCC
Confidence 4566433
No 271
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=38.58 E-value=64 Score=22.02 Aligned_cols=26 Identities=15% Similarity=0.056 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEK 319 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~ 319 (394)
+|..+|+.|..+...|+.|-..|+.-
T Consensus 4 QLEdKVEell~~~~~le~EV~Rl~~l 29 (33)
T 2wq1_A 4 QLEDKIEENTSKIYHNTNEIARNTKL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34444555544444455555554443
No 272
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=38.31 E-value=1.5e+02 Score=30.06 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchh-cccccCCCCchhhhhhh
Q 016182 293 ASLKSEINQLSENSEKLRQENAALLEKLKSAQLGNKQEIV-LNEDKRVTPVSTENLLS 349 (394)
Q Consensus 293 ~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lql~~~~E~~-~~~~~~~~p~~~e~lls 349 (394)
......|..|+..+.........|++.+..+.....+... ........|..+.+++.
T Consensus 101 ~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~~~~~~~~~~~~~~~~~~~dC~~i~~ 158 (411)
T 3ghg_C 101 LTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIAN 158 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCCEESCCCCSCCBSSHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCcCCCCCHHHHHh
Confidence 3334444444444444555556666666555332222111 11122345666666664
No 273
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=38.25 E-value=26 Score=27.12 Aligned_cols=11 Identities=18% Similarity=0.214 Sum_probs=3.9
Q ss_pred HHHHHHHHHHH
Q 016182 306 SEKLRQENAAL 316 (394)
Q Consensus 306 ~~~L~~EN~~L 316 (394)
+..|..++..|
T Consensus 66 ~~~L~~e~~~L 76 (80)
T 1hlo_A 66 NHTHQQDIDDL 76 (80)
T ss_dssp HHHHHHHHHTH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 274
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=37.61 E-value=46 Score=22.85 Aligned_cols=22 Identities=14% Similarity=0.297 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016182 301 QLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 301 ~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
+|..+++.|..+|..|..++..
T Consensus 5 QLEdKvEeLl~~~~~L~~EV~R 26 (34)
T 2bni_A 5 QIEDKLEEILSKGHHICNELAR 26 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHH
Confidence 3334444444444444444443
No 275
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=37.60 E-value=1.2e+02 Score=22.36 Aligned_cols=47 Identities=30% Similarity=0.226 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+..+..|+.++..++.+-.....+...|-.-...|..|....|.-|.
T Consensus 6 q~~i~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EIatYRkLLE 52 (59)
T 1gk6_A 6 EDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATYRKLLE 52 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Confidence 45667788888888888777777777777777778888877776664
No 276
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=37.59 E-value=1.1e+02 Score=22.29 Aligned_cols=36 Identities=8% Similarity=0.092 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 265 ESARRSRLRKQAEAEELSRKVDSLIDENASLKSEIN 300 (394)
Q Consensus 265 ESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~ 300 (394)
|-|-||=.|-+..+++||.++..-+..+..+..++.
T Consensus 8 efAERsV~KLek~ID~LEdeL~~eKek~~~i~~eLD 43 (52)
T 2z5i_A 8 YHLENEVARLKKLVDDLEDELYAQKLKYKAISEELD 43 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 455566556666666666555555544444444443
No 277
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=37.37 E-value=59 Score=29.88 Aligned_cols=20 Identities=20% Similarity=0.225 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016182 284 KVDSLIDENASLKSEINQLS 303 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ 303 (394)
++..|+++|..|.+|+++|.
T Consensus 162 ~i~~L~a~N~hLqkENeRL~ 181 (186)
T 3q4f_C 162 TIAENQAKNEHLQKENERLL 181 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444443
No 278
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=37.37 E-value=54 Score=31.05 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 281 LSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
|-.+|+.++...+.|..++..+.+..+..+.....|...|.+
T Consensus 4 lnsRvd~~EErIs~le~rleei~q~eq~~ekrik~ne~sL~d 45 (233)
T 2yko_A 4 LRSRCDQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQE 45 (233)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444444444444333333333344444433
No 279
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=37.22 E-value=1.1e+02 Score=24.73 Aligned_cols=19 Identities=11% Similarity=0.272 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 016182 306 SEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 306 ~~~L~~EN~~Lr~~L~~lq 324 (394)
|..+..=-..|-.+|...+
T Consensus 50 YNeiKD~gq~L~g~iA~~r 68 (85)
T 3viq_B 50 YNEIRDIALGMIGKVAEHE 68 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HhHHHHHHHHHHHHHHHHc
Confidence 3333333344444444443
No 280
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=37.10 E-value=52 Score=28.06 Aligned_cols=36 Identities=6% Similarity=0.208 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 281 LSRKVDSLIDENASLKSEINQLSENSEKLRQENAAL 316 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~L 316 (394)
|+.+++.|+.....|...+..++++...++...+.|
T Consensus 103 l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l 138 (151)
T 2zdi_C 103 LEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEV 138 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444444444444444333333
No 281
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=36.79 E-value=97 Score=28.91 Aligned_cols=29 Identities=34% Similarity=0.461 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
++-+.|..+|+.|+.|+..|+.++..|++
T Consensus 115 eEN~~Lh~~ie~l~eEi~~LkeEn~eLke 143 (209)
T 2wvr_A 115 KENEKLHKEIEQKDNEIARLKKENKELAE 143 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455666666666666666666665544
No 282
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=36.67 E-value=83 Score=31.83 Aligned_cols=41 Identities=15% Similarity=0.010 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
+..||..+...+.+...|+..+..++.++..|.....+|..
T Consensus 93 ~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l~~ 133 (409)
T 1m1j_C 93 IIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLES 133 (409)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444444444433
No 283
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=36.63 E-value=1.9e+02 Score=26.94 Aligned_cols=16 Identities=0% Similarity=-0.014 Sum_probs=6.0
Q ss_pred HHHHHHHHHHHHHHHH
Q 016182 306 SEKLRQENAALLEKLK 321 (394)
Q Consensus 306 ~~~L~~EN~~Lr~~L~ 321 (394)
+..++.+...++.+|.
T Consensus 131 ~~~~~~~l~~~~~~l~ 146 (369)
T 4dk0_A 131 MDVVQENIKQAEIEVN 146 (369)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 284
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=36.48 E-value=30 Score=28.58 Aligned_cols=24 Identities=25% Similarity=0.321 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 301 QLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 301 ~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+|+.+...|..|...|+++|..++
T Consensus 11 ~l~~~~~~l~~~i~~lkeel~~L~ 34 (109)
T 2wg5_A 11 QLEDKVEELLSKNYHLENEVARLR 34 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444445555556666666554
No 285
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=36.47 E-value=1.1e+02 Score=24.73 Aligned_cols=26 Identities=27% Similarity=0.388 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLS 303 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ 303 (394)
-+.|..+++.+..|...|+.++..|+
T Consensus 40 N~~Lh~~ie~~~eEi~~Lk~en~~L~ 65 (83)
T 1wlq_A 40 NEKLHKEIEQKDSEIARLRKENKDLA 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555554443
No 286
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=36.41 E-value=56 Score=22.45 Aligned_cols=21 Identities=10% Similarity=0.211 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 016182 302 LSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 302 L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
|..+++.|..+|..|..++..
T Consensus 6 LEdKVEeLl~~n~~Le~EV~R 26 (34)
T 1uo4_A 6 IEDKGEEILSKLYHIENELAR 26 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHH
Confidence 334444444444444444433
No 287
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=36.28 E-value=75 Score=21.82 Aligned_cols=28 Identities=11% Similarity=0.127 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+|..+++.|-.+...|+.|-..|+.-|.
T Consensus 5 QledKvEel~~~~~~l~nEv~Rl~~lLg 32 (34)
T 2r2v_A 5 QVADKLEEVASKLYHNANELARVAKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 4445555555555555555555555443
No 288
>1dkg_A Nucleotide exchange factor GRPE; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: b.73.1.1 h.1.9.1
Probab=35.74 E-value=52 Score=29.96 Aligned_cols=13 Identities=23% Similarity=0.371 Sum_probs=8.0
Q ss_pred hhhhhhhccCCCC
Q 016182 344 TENLLSRVNNSGT 356 (394)
Q Consensus 344 ~e~lls~~~~~~~ 356 (394)
...|+..+...|=
T Consensus 127 ~~~l~~~L~~~Gv 139 (197)
T 1dkg_A 127 LKSMLDVVRKFGV 139 (197)
T ss_dssp HHHHHHHHTTTTE
T ss_pred HHHHHHHHHHCCC
Confidence 4566666666653
No 289
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=35.66 E-value=1.6e+02 Score=23.18 Aligned_cols=46 Identities=24% Similarity=0.155 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.||..+|..-+.|..+|..-+..|+.++.+-..=|..|..++..+|
T Consensus 6 KeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~~q 51 (74)
T 2q6q_A 6 KELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQ 51 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5788888888888888888888888888888777888887776654
No 290
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=35.63 E-value=1.2e+02 Score=23.89 Aligned_cols=32 Identities=13% Similarity=0.368 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 292 NASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 292 N~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
...|..++..+..+...|..+...|+.++..+
T Consensus 67 ~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~l 98 (107)
T 1fxk_A 67 TEELQEKLETLQLREKTIERQEERVMKKLQEM 98 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555554
No 291
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=35.12 E-value=1.8e+02 Score=23.56 Aligned_cols=48 Identities=19% Similarity=0.201 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+++.+...+..|+.+...++.++....++|..|..=.-.|..+|...
T Consensus 37 ~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIatY 84 (95)
T 3mov_A 37 KEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAY 84 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666667777777777777776666666665555555555544
No 292
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=34.58 E-value=92 Score=27.82 Aligned_cols=17 Identities=24% Similarity=0.227 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 016182 272 LRKQAEAEELSRKVDSL 288 (394)
Q Consensus 272 ~RKq~~leeLe~rV~~L 288 (394)
.+|++++.||..+...|
T Consensus 22 ~~K~~~LqeL~~Q~vaf 38 (155)
T 2aze_A 22 KQKQSQLQELILQQIAF 38 (155)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 46677777776665543
No 293
>1lwu_B Fibrinogen beta chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_B*
Probab=34.51 E-value=72 Score=31.23 Aligned_cols=10 Identities=10% Similarity=0.308 Sum_probs=5.1
Q ss_pred CCchhhhhhh
Q 016182 340 TPVSTENLLS 349 (394)
Q Consensus 340 ~p~~~e~lls 349 (394)
.|.++.+++.
T Consensus 72 ~~~dC~~i~~ 81 (323)
T 1lwu_B 72 SGMHCEDIYR 81 (323)
T ss_dssp CBSSHHHHHH
T ss_pred CCCCHHHHHh
Confidence 3445555553
No 294
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=34.37 E-value=2.3e+02 Score=29.74 Aligned_cols=9 Identities=22% Similarity=0.564 Sum_probs=5.2
Q ss_pred CCCCcccCC
Q 016182 58 APQPYMWGP 66 (394)
Q Consensus 58 ~phPYmWG~ 66 (394)
+-.-|||+.
T Consensus 75 T~gi~~~~~ 83 (592)
T 1f5n_A 75 TKGIWMWCV 83 (592)
T ss_dssp CCSEEEEEE
T ss_pred eeEEEEeec
Confidence 445667753
No 295
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=33.76 E-value=96 Score=20.76 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 281 LSRKVDSLIDENASLKSEINQLS 303 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~ 303 (394)
||..+..|..-.++|..++.+|.
T Consensus 4 lee~~r~l~~ivq~lq~r~drle 26 (32)
T 2akf_A 4 LEEDVRNLNAIVQKLQERLDRLE 26 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555543
No 296
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=33.66 E-value=2.7e+02 Score=25.17 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=9.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHH
Q 016182 255 KRERRKQSNRESARRSRLRKQA 276 (394)
Q Consensus 255 KR~RRk~sNRESARRSR~RKq~ 276 (394)
.+.++++.-|.-..+-++-|..
T Consensus 37 ~~l~~~e~~r~k~~~h~~~k~~ 58 (169)
T 3k29_A 37 EKLRERESERDKVKNHYMQKIR 58 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444433
No 297
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=33.61 E-value=56 Score=28.70 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..++..|+.||.....++.. ...|...|..++..
T Consensus 91 ~~ri~~Le~E~~~~~~el~~-------~v~eae~ll~~v~~ 124 (151)
T 1yke_B 91 LRKIDMLQKKLVEVEDEKIE-------AIKKKEKLLRHVDS 124 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
Confidence 34444455554444444444 44444444444443
No 298
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=33.39 E-value=2.5e+02 Score=24.72 Aligned_cols=38 Identities=24% Similarity=0.284 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 263 NRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEIN 300 (394)
Q Consensus 263 NRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~ 300 (394)
||-.--.++.|=-.+.+.|-.+|+.|+.-...|+..+.
T Consensus 8 ~R~y~~~~k~kL~~~sd~LvtkVDDLQD~VE~LRkDV~ 45 (141)
T 3okq_A 8 NRMYMEKSQTELGDLSDTLLSKVDDLQDVIEIMRKDVA 45 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 55555566666667777777777777777777776553
No 299
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=33.17 E-value=2.1e+02 Score=23.81 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 281 LSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
|...+..|-.....|..+-=.|..++..-.-|...|+.++.++
T Consensus 47 L~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL~~rV~dl 89 (107)
T 1ytz_T 47 LRDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTLRNRIDQA 89 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHh
Confidence 3333333333333333333333344444456677777777665
No 300
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=33.08 E-value=32 Score=23.92 Aligned_cols=18 Identities=33% Similarity=0.353 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 016182 283 RKVDSLIDENASLKSEIN 300 (394)
Q Consensus 283 ~rV~~L~~EN~~L~~ei~ 300 (394)
.+|..|+.+|..|..+|.
T Consensus 20 dkVR~LE~~N~~Le~~i~ 37 (39)
T 1gk7_A 20 DKVRFLEQQNKILLAELE 37 (39)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455666666666666554
No 301
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=33.04 E-value=87 Score=29.72 Aligned_cols=35 Identities=17% Similarity=0.148 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQE 312 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~E 312 (394)
+++++..+..+..+...|..++..|+++...|..+
T Consensus 94 ~~~~e~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~ 128 (357)
T 3rrk_A 94 LEEAEAVLRPVASRAEVLGKERAALEEEIQTIELF 128 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 34444444444444444444444444444444333
No 302
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=32.48 E-value=92 Score=28.88 Aligned_cols=26 Identities=15% Similarity=0.262 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLS 303 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ 303 (394)
+++|+.+++.|+....+|..++..++
T Consensus 68 l~~l~~e~~el~d~~lR~~AEfeN~R 93 (213)
T 4ani_A 68 IAELEAKLSEMEHRYLRLYADFENFR 93 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444334444443333
No 303
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=32.46 E-value=1.5e+02 Score=21.78 Aligned_cols=29 Identities=21% Similarity=0.227 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
+-.+.|..+|.+|+.....+..||.+|+.
T Consensus 11 e~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 11 QINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 33466777777777777777777777643
No 304
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=32.43 E-value=1.1e+02 Score=25.93 Aligned_cols=10 Identities=10% Similarity=0.019 Sum_probs=4.6
Q ss_pred chHHHHHHHH
Q 016182 250 NERELKRERR 259 (394)
Q Consensus 250 dErE~KR~RR 259 (394)
++.++.+.+.
T Consensus 42 ~~~dl~~l~~ 51 (142)
T 3gp4_A 42 GAEDLRWILF 51 (142)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 4444444443
No 305
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=32.00 E-value=2e+02 Score=23.22 Aligned_cols=23 Identities=22% Similarity=0.375 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L 302 (394)
.|+.+++.|+.+...|..++..+
T Consensus 5 ~L~~~i~~L~~q~~~L~~ei~~~ 27 (85)
T 3viq_B 5 QLESRVHLLEQQKEQLESSLQDA 27 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444443
No 306
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=31.99 E-value=2.3e+02 Score=23.81 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
++++.++..++..|..+...|+..+..|.++
T Consensus 10 ~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkE 40 (106)
T 4e61_A 10 QAELTKSQETIGSLNEEIEQYKGTVSTLEIE 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555666555555544
No 307
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=31.99 E-value=93 Score=26.53 Aligned_cols=24 Identities=4% Similarity=0.242 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 298 EINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 298 ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
|+..+.+++.....|...|..++.
T Consensus 100 E~~~~~~el~~~v~e~e~ll~~v~ 123 (132)
T 1ykh_B 100 KLVEVEDEKIEAIKKKEKLMRHVD 123 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334444444444444
No 308
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=31.94 E-value=72 Score=28.00 Aligned_cols=34 Identities=6% Similarity=-0.018 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQ 311 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~ 311 (394)
+..||+++..|......+..+|..|++++..|+.
T Consensus 2 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (192)
T 2gkw_A 2 TGLLESQLSRHDQMLSVHDIRLADMDLRFQVLET 35 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3456666766666666666666666666666554
No 309
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=31.88 E-value=1e+02 Score=31.77 Aligned_cols=22 Identities=14% Similarity=0.033 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016182 272 LRKQAEAEELSRKVDSLIDENA 293 (394)
Q Consensus 272 ~RKq~~leeLe~rV~~L~~EN~ 293 (394)
+.-+.++++|..+.+.+..+..
T Consensus 47 r~~~~~~~~l~~~rN~~sk~i~ 68 (484)
T 3lss_A 47 RRTQFLTEASKKLINICSKAVG 68 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444433
No 310
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=31.57 E-value=86 Score=26.59 Aligned_cols=26 Identities=31% Similarity=0.353 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQ 301 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~ 301 (394)
+++.+|+.+|+.++..+++|+.-...
T Consensus 4 ~e~~~l~~qi~~~ekr~~RLKevF~~ 29 (123)
T 4dzo_A 4 KEVAELKKQVESAELKNQRLKEVFQT 29 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666655555544433
No 311
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=31.40 E-value=1.9e+02 Score=22.61 Aligned_cols=53 Identities=19% Similarity=0.172 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 271 RLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 271 R~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
..|-...+..+...+..|+.+...++.++....+++..|..=.-.|-.+|...
T Consensus 21 e~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatY 73 (84)
T 1gk4_A 21 EENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATY 73 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33445566777778888888888888888887777777776666666666554
No 312
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=31.14 E-value=1.3e+02 Score=24.12 Aligned_cols=24 Identities=29% Similarity=0.410 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L 302 (394)
+.|..+|+.+..++..|+.++..|
T Consensus 37 ~~Lh~~ie~~~eEi~~LkeEN~~L 60 (79)
T 2zxx_A 37 EKLHKEIEQKDSEIARLRKENKDL 60 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555555555555544444
No 313
>4gif_A Polycystic kidney disease 2-like 1 protein; coiled-coil, trimer, Trp channel, transient receptor potenti channel, polycystic kidney disease (PKD); 2.80A {Homo sapiens}
Probab=31.08 E-value=1.3e+02 Score=21.70 Aligned_cols=36 Identities=22% Similarity=0.189 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
++++.-|.+||.+|+.-......+|..+..++.-++
T Consensus 6 ~eeF~~L~rRVlqlE~~l~gI~S~idav~~Kl~~~E 41 (45)
T 4gif_A 6 GEEFYMLTRRVLQLETVLEGVVSQIDAVGSKLKMLE 41 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666777777777766666666666655554443
No 314
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=30.90 E-value=1.6e+02 Score=26.94 Aligned_cols=50 Identities=26% Similarity=0.339 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 271 RLRKQAEAEELSRKVDSLID-------ENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 271 R~RKq~~leeLe~rV~~L~~-------EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
|.+|+-.++....+++.|+. .......++...++.++.| |..|+++|-.+
T Consensus 134 R~~kllDyd~~~~~~~kl~~k~~kd~~kl~kae~el~~a~~~ye~l---N~~L~~eLP~l 190 (237)
T 4avm_A 134 RGRKLVDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDL---NQELLEELPIL 190 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
No 315
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=30.59 E-value=1.6e+02 Score=24.24 Aligned_cols=39 Identities=15% Similarity=0.258 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
+.|+.+++.|+.....|...+..++++...+..+.++|.
T Consensus 91 ~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~~ 129 (133)
T 1fxk_C 91 ESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELL 129 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556666666666666666666666655555554444443
No 316
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=30.37 E-value=36 Score=28.12 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccchh
Q 016182 299 INQLSENSEKLRQENAALLEKLKSAQLGNKQEIV 332 (394)
Q Consensus 299 i~~L~ee~~~L~~EN~~Lr~~L~~lql~~~~E~~ 332 (394)
+..|++++..|+.|+..|++- =+.++...|++
T Consensus 16 ~~~l~~~i~~lkeel~~L~~~--P~~Vg~v~e~~ 47 (109)
T 2wg5_A 16 VEELLSKNYHLENEVARLRSP--PLLVGVVSDIL 47 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC--CEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CceEEEEEEEe
Confidence 333333444444455555542 23555555554
No 317
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=30.36 E-value=2.3e+02 Score=23.24 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKL----RQENAALLEKLKS 322 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L----~~EN~~Lr~~L~~ 322 (394)
++++.++..--.|.+.++..|-.|.....++ +.|...||.+|..
T Consensus 39 ~eyE~ki~~Qi~Emq~Ir~tvyeLE~~h~kmKq~YEeEI~rLr~eLe~ 86 (92)
T 3vp9_A 39 KDYDFKMNQQLAEMQQIRNTVYERELTHRKMKDAYEEEIKHLKLGLEQ 86 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566655556666666666665554444 4566777776653
No 318
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=30.36 E-value=2.4e+02 Score=23.48 Aligned_cols=58 Identities=17% Similarity=0.176 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 267 ARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 267 ARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
|+..=+++.++...--+-|..|..-...-+.+-..-..++.+|+.|...|.++|.++.
T Consensus 30 Aq~~l~~~eaQAaTCNqTV~tL~~SL~kekaq~q~qq~~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 30 TQDSLLQAETQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444432222222222223567888888999999988764
No 319
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=30.20 E-value=1.6e+02 Score=27.85 Aligned_cols=26 Identities=15% Similarity=0.313 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSE 304 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~e 304 (394)
.+|+.+++.|+.+...+..++..+.+
T Consensus 229 ~~l~~~i~~l~~~l~~~~~~l~~~~~ 254 (357)
T 3rrk_A 229 ARMKERARLAPEELVGIREEVARLSR 254 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444333
No 320
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=29.87 E-value=2.1e+02 Score=22.67 Aligned_cols=28 Identities=18% Similarity=0.251 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENASLKSEINQLS 303 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~~L~ 303 (394)
+.++.|+..++.|+..-.+|..++...+
T Consensus 7 EKv~~LE~sld~LQTrfARLLaEy~ssQ 34 (74)
T 3swf_A 7 EKVTRMESSVDLLQTRFARILAEYESMQ 34 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666667777776666666665443
No 321
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=29.57 E-value=4.1e+02 Score=27.79 Aligned_cols=8 Identities=50% Similarity=0.422 Sum_probs=3.6
Q ss_pred HHHHHHHH
Q 016182 264 RESARRSR 271 (394)
Q Consensus 264 RESARRSR 271 (394)
+|+|++-.
T Consensus 496 ~e~~~~~~ 503 (592)
T 1f5n_A 496 AESAQASA 503 (592)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 45554333
No 322
>2lq4_p Lysophosphatidic acid receptor 1; GPCR, G protein-coupled receptor, de novo protein; NMR {Artificial gene}
Probab=29.52 E-value=11 Score=29.43 Aligned_cols=44 Identities=30% Similarity=0.413 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDEN---------------------ASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 278 leeLe~rV~~L~~EN---------------------~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+..||.++.+|+.|. +.|+.++.+|+=++..|...|.+|+.+|+
T Consensus 15 lqalekelaqlekelqawncicdiencsnmaplysdqalkkklaqlkwklqalkkknaqlkkklq 79 (80)
T 2lq4_p 15 LQALEKELAQLEKELQAWNCICDIENCSNMAPLYSDQALKKKLAQLKWKLQALKKKNAQLKKKLQ 79 (80)
T ss_dssp THHHHTTHHHHHHHHTTTCSSCCCCCCCSSCCCCCSTTTHHHHHTTHHHHHHHTTTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Confidence 455666677777664 34777888888888888888888887775
No 323
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=29.49 E-value=84 Score=28.87 Aligned_cols=26 Identities=23% Similarity=0.137 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEI 299 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei 299 (394)
-..++.+|+.+..+|+.||.+|..+-
T Consensus 159 ~L~~i~~L~a~N~hLqkENeRL~~e~ 184 (186)
T 3q4f_C 159 CLDTIAENQAKNEHLQKENERLLRDW 184 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34456677777777777777776653
No 324
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=29.37 E-value=1.8e+02 Score=21.88 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 280 ELSRKVDSLIDENASLKSEINQL 302 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L 302 (394)
.|..+|..|++||..|..-++.-
T Consensus 14 aLkDqV~eL~qe~k~m~k~lEeE 36 (56)
T 2w6b_A 14 ALKDEVQELRQDNKKMKKSLEEE 36 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555666655555555443
No 325
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=29.15 E-value=3.2e+02 Score=28.08 Aligned_cols=12 Identities=33% Similarity=0.324 Sum_probs=4.3
Q ss_pred HHHHHHHHHHHH
Q 016182 309 LRQENAALLEKL 320 (394)
Q Consensus 309 L~~EN~~Lr~~L 320 (394)
|+.+...|.++|
T Consensus 123 le~~~~~~~~~~ 134 (484)
T 3lss_A 123 LAKEAQQLEEER 134 (484)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 326
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=28.81 E-value=72 Score=21.04 Aligned_cols=25 Identities=24% Similarity=0.321 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 300 NQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 300 ~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+.|..+|..|++..+.|..+|..+.
T Consensus 4 ealekkcaalesklqalekkleale 28 (31)
T 3ljm_A 4 EALEKKCAALESKLQALEKKLEALE 28 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666666666554
No 327
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=28.64 E-value=1.2e+02 Score=21.79 Aligned_cols=31 Identities=13% Similarity=0.229 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.|..+|.++-++..+.+.+...|+.++..|.
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666677777777777777777777777654
No 328
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=28.39 E-value=34 Score=28.73 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDE---NASLKSEINQLSENSEKL 309 (394)
Q Consensus 275 q~~leeLe~rV~~L~~E---N~~L~~ei~~L~ee~~~L 309 (394)
-+|+..|+.++..|+.+ +..|......|..+++.|
T Consensus 73 ieYIk~Lq~~~~~l~~~~~~~~~l~~~n~~L~~riqeL 110 (118)
T 4ati_A 73 VDYIRKLQREQQRAKDLENRQKKLEHANRHLLLRVQEL 110 (118)
T ss_dssp HHHHHHHHHHHHHHHHHCC-------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777777777766654 233444444444443333
No 329
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=27.52 E-value=45 Score=32.72 Aligned_cols=40 Identities=20% Similarity=0.095 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 284 KVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
++..|+.....+..+|..|+..+..|+.+...|+++|..+
T Consensus 5 ~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~~~i~~l 44 (319)
T 1fzc_C 5 EIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQL 44 (319)
T ss_dssp -----CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555556666666666666666666666655554
No 330
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.16 E-value=62 Score=32.70 Aligned_cols=16 Identities=19% Similarity=0.146 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHhh
Q 016182 309 LRQENAALLEKLKSAQ 324 (394)
Q Consensus 309 L~~EN~~Lr~~L~~lq 324 (394)
|..+...++++|+.++
T Consensus 84 l~~~~~~~~~~~~~l~ 99 (437)
T 4b4t_L 84 LEKLYDKTENDIKALQ 99 (437)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3333344444455443
No 331
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.05 E-value=62 Score=32.67 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 277 EAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALL 317 (394)
Q Consensus 277 ~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr 317 (394)
+.++|+.++..++ .++..|++++..+..|...|+
T Consensus 66 ~~~~~e~~~~~~~-------~~~~~l~~~~~~~~~~~~~l~ 99 (437)
T 4b4t_L 66 EHRRYDDQLKQRR-------QNIRDLEKLYDKTENDIKALQ 99 (437)
T ss_dssp -CHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhc
Confidence 3445555554444 444455555555555544443
No 332
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=27.01 E-value=3.7e+02 Score=24.70 Aligned_cols=12 Identities=8% Similarity=-0.006 Sum_probs=4.5
Q ss_pred HHHHHHHHHHHH
Q 016182 309 LRQENAALLEKL 320 (394)
Q Consensus 309 L~~EN~~Lr~~L 320 (394)
++.+...++.+|
T Consensus 133 ~~a~l~~a~a~l 144 (341)
T 3fpp_A 133 IDAQIKRNQASL 144 (341)
T ss_dssp HHHHHHHTHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 333
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=27.00 E-value=1.9e+02 Score=28.31 Aligned_cols=49 Identities=18% Similarity=0.227 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHh
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQ------LSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~------L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+++++|+.+++.|+.+...|..++.. .+.++..|..+...+..+|.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 300 (426)
T 1lrz_A 246 DEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEG 300 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666666666433321 1233344444444444444443
No 334
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=26.98 E-value=58 Score=28.48 Aligned_cols=46 Identities=22% Similarity=0.266 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+..|...+..+..+...|..++..-+......+.++..|..+|.+|
T Consensus 34 l~~l~~~l~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~L 79 (135)
T 2e7s_A 34 YNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDL 79 (135)
T ss_dssp HHHHHHHTTTHHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555555555544444444444444555555555444
No 335
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=26.84 E-value=2.2e+02 Score=28.16 Aligned_cols=42 Identities=12% Similarity=0.370 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
+.|..+++.|...-..|..++..-...+..|+.+-..|+-.|
T Consensus 208 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lkp~l 249 (373)
T 3hhm_B 208 DKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDL 249 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHH
Confidence 344444444444444444444444444444444444444444
No 336
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=26.80 E-value=3.6e+02 Score=27.28 Aligned_cols=16 Identities=6% Similarity=0.117 Sum_probs=8.9
Q ss_pred chHHHHHHHHHHHhHH
Q 016182 250 NERELKRERRKQSNRE 265 (394)
Q Consensus 250 dErE~KR~RRk~sNRE 265 (394)
-|++.+..-.+++|+.
T Consensus 61 ~er~~~~rIe~L~~~L 76 (390)
T 1deq_A 61 VDQDFTSRINKLRDSL 76 (390)
T ss_pred hhhhHHHHHHHHHHHH
Confidence 3455555555666654
No 337
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=26.77 E-value=1.9e+02 Score=30.26 Aligned_cols=27 Identities=15% Similarity=0.164 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
.+++.+-+.+++||..++++....+..
T Consensus 37 ae~~a~n~~i~aeNeaikkrNa~aka~ 63 (497)
T 3iox_A 37 AANNAANAALTAENTAIKKRNADAKAD 63 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444555555444444333
No 338
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=26.74 E-value=1.5e+02 Score=24.54 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
..|+.+++.|..+-+.|-..|..+++++..|.
T Consensus 9 ~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lt 40 (106)
T 2aze_B 9 EGLTQDLRQLQESEQQLDHLMNICTTQLRLLS 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555555555555555555555555555554
No 339
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=26.58 E-value=2e+02 Score=21.42 Aligned_cols=21 Identities=33% Similarity=0.482 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 016182 302 LSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 302 L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
|-++.+.|+.||..||.+|.+
T Consensus 8 L~~QVe~Lk~ENshLrrEL~d 28 (54)
T 1deb_A 8 LLKQVEALKMENSNLRQELED 28 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHh
Confidence 333444444455555555543
No 340
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=26.25 E-value=25 Score=25.41 Aligned_cols=24 Identities=25% Similarity=0.513 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 298 EINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 298 ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+|+.+.+..+.++.+...||.++.
T Consensus 7 ELeEa~Erae~ae~~vnkLR~k~R 30 (45)
T 3zwh_Q 7 ELEDATETADAMNREVSSLKNKLR 30 (45)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444444444455555555555553
No 341
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=26.11 E-value=1.9e+02 Score=22.61 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 276 AEAEELSRKVDSLIDENAS------LKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~------L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..|+.|+.++..|+.+... =..++..|..++..+..+...+-++=..
T Consensus 29 ~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWee 81 (89)
T 2lw1_A 29 QLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEY 81 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777776542 1245566666666666666666555433
No 342
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=26.03 E-value=26 Score=25.80 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
..+|.---.||..|..-+.+|...+..|+.....|...+.++.
T Consensus 9 knrvayklkenaklenivarlendnanlekdianlekdianle 51 (56)
T 3he4_A 9 KNRVAYKLKENAKLENIVARLENDNANLEKDIANLEKDIANLE 51 (56)
T ss_dssp --CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcchHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 3333333356777777777776666666666666666665543
No 343
>3p7i_A PHND, subunit of alkylphosphonate ABC transporter; phosphonate binding protein, transport protein; 1.71A {Escherichia coli UTI89} PDB: 3qk6_A 3quj_A* 3s4u_A
Probab=26.02 E-value=49 Score=31.21 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=35.2
Q ss_pred CccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 245 ETWIQNERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKS 297 (394)
Q Consensus 245 e~~~~dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ 297 (394)
+.+...-+++.+.+.++.-+..+..+..-|++++.+|+.++..|+.....|..
T Consensus 260 ~~dy~~ir~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (321)
T 3p7i_A 260 DLQLVPIRQLALFKEMQSVKDNKGLNEQDKLAKTTAIQAQLDDLDRLNNALSA 312 (321)
T ss_dssp GGGGHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455666666666666666655666677778888888888877766555444
No 344
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=25.56 E-value=2.1e+02 Score=23.57 Aligned_cols=41 Identities=24% Similarity=0.362 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 279 EELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 279 eeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+|+.+++.|+.+...|.. +..+...|+..-.-|..+|..+
T Consensus 50 ~eL~~EI~~L~~eI~~LE~----iqs~aK~LRnKA~~L~~eLe~F 90 (96)
T 1t3j_A 50 KHLEEEIARLSKEIDQLEK----MQNNSKLLRNKAVQLESELENF 90 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhHHHHHHHHHHHHHHHHH
Confidence 4455555555555444332 2223334444444455555443
No 345
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=25.54 E-value=1.1e+02 Score=28.58 Aligned_cols=36 Identities=17% Similarity=0.108 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 288 LIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 288 L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
.+.+...++.++..++.++..++.+...++.+|...
T Consensus 120 a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~ 155 (369)
T 4dk0_A 120 AKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYT 155 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 344444455555666666666666666666666543
No 346
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=25.42 E-value=1.8e+02 Score=26.20 Aligned_cols=39 Identities=10% Similarity=0.115 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 283 RKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 283 ~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
++-+.|...-..|...+..|.++...|..+...|+++..
T Consensus 49 ~~~~~l~~g~~~L~~~~~~Le~~~~~L~~~i~~l~~~~~ 87 (174)
T 2p22_A 49 RFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVLTANRA 87 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555555555555555555555555333
No 347
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.37 E-value=1e+02 Score=30.95 Aligned_cols=25 Identities=12% Similarity=0.283 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENS 306 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~ 306 (394)
.+.+..|+.+...|..++..+++++
T Consensus 38 ~~~~~~l~~~~~~l~~~~~~~~~e~ 62 (405)
T 4b4t_J 38 TENVRRLEAQRNALNDKVRFIKDEL 62 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555666666554433
No 348
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=25.35 E-value=9.3 Score=32.22 Aligned_cols=29 Identities=31% Similarity=0.441 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 294 SLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 294 ~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
.|..++..|..+.+.|..||..|+.++..
T Consensus 62 ~LE~e~~~L~~e~e~L~~En~~l~~E~~~ 90 (107)
T 3a5t_A 62 ELEKQKAELQQEVEKLASENASMKLELDA 90 (107)
T ss_dssp HHHHHHTTTSSTTTTTTSTTSHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444555555555555444
No 349
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=25.30 E-value=2.4e+02 Score=21.94 Aligned_cols=12 Identities=33% Similarity=0.606 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q 016182 293 ASLKSEINQLSE 304 (394)
Q Consensus 293 ~~L~~ei~~L~e 304 (394)
..|..++..++.
T Consensus 36 ~~lE~eL~~~r~ 47 (84)
T 1gk4_A 36 GRLQDEIQNMKE 47 (84)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 350
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=25.14 E-value=1.2e+02 Score=27.30 Aligned_cols=54 Identities=9% Similarity=0.031 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 270 SRLRKQAEAEELSRKV-DSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 270 SR~RKq~~leeLe~rV-~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
-|.+.++++-..+..+ ..|++....|......|+.....|+.+-..|...+..+
T Consensus 28 ~~~~~~e~l~~~q~~lq~sl~~~~~~l~~g~~~L~~~~~~Le~~~~~L~~~i~~l 82 (174)
T 2p22_A 28 DVDYVADKILTRQTVMQESIARFHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVL 82 (174)
T ss_dssp HHHHHHHHTGGGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444433333 33455555555555555555555555555555555544
No 351
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=25.10 E-value=1.3e+02 Score=23.35 Aligned_cols=24 Identities=25% Similarity=0.289 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 301 QLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 301 ~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
.|+..+..-..|++.|+.+|..++
T Consensus 29 eLE~~L~~kd~eI~eLr~~LdK~q 52 (67)
T 1zxa_A 29 ELEKRLSEKEEEIQELKRKLHKCQ 52 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444445555555554443
No 352
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=25.04 E-value=85 Score=25.90 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 300 NQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 300 ~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..|++++++|..|...|+..|..
T Consensus 59 AKL~Rk~DKl~~ele~l~~~L~s 81 (94)
T 3vlc_E 59 TKNNRKLDSLDKEINNLKDEIQS 81 (94)
T ss_dssp HHHHHHHHHHHHHTTTHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666665543
No 353
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=24.91 E-value=2.2e+02 Score=21.37 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
..+++.|+.....-...+...+.++..|+...+.|..+|..
T Consensus 34 ~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~s 74 (77)
T 3trt_A 34 KSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDA 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35555555555555555555555555555555555555544
No 354
>1hs7_A Syntaxin VAM3; UP-and-DOWN three-helix bundle insertion preceding proline in AN alpha-helix, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=24.73 E-value=1.1e+02 Score=25.11 Aligned_cols=45 Identities=27% Similarity=0.319 Sum_probs=22.3
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHh
Q 016182 279 EELSRKVD-SLIDENASLKSEINQLSE--NSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 279 eeLe~rV~-~L~~EN~~L~~ei~~L~e--e~~~L~~EN~~Lr~~L~~l 323 (394)
.+|..+|+ .|......|.+++..|.. ..++|..+-..|...+..+
T Consensus 36 ~~LR~~l~~~l~~~~~~L~k~~~~l~~l~qkeRL~~dF~~l~~~fQ~~ 83 (97)
T 1hs7_A 36 KELRYKIETELIPNCTSVRDKIESNILIHQNGKLSADFKNLKTKYQSL 83 (97)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHSTHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 34555555 555555555555553333 4455555555555544444
No 355
>3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens}
Probab=24.66 E-value=21 Score=31.09 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 267 ARRSRLRKQAEAEELSRKVDSLIDENAS 294 (394)
Q Consensus 267 ARRSR~RKq~~leeLe~rV~~L~~EN~~ 294 (394)
|-+-|.+=+.+|-.|+.++..++.|...
T Consensus 21 Ae~~k~~Leek~~~~e~~~~~~~~Elee 48 (130)
T 3cl3_D 21 ATKECQALEGRARAASEQARQLESEREA 48 (130)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3333444444555555555555555444
No 356
>2yo3_A General control protein GCN4, putative inner MEMB protein, general control protein...; HANS motif, YADA-like head, ylhead; 2.00A {Saccharomyces cerevisiae}
Probab=24.58 E-value=2e+02 Score=27.76 Aligned_cols=56 Identities=13% Similarity=0.232 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 266 SARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 266 SARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
+.......--.++.+|..+|..+..+-..+.+.++++.+....|+.|...++.-++
T Consensus 206 s~~~an~yTd~k~~~l~n~I~~V~n~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (268)
T 2yo3_A 206 SVEEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIYHIENEIARIKKLIK 261 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33444555667888888888888888888888888888888888888777765544
No 357
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=24.35 E-value=2.6e+02 Score=21.95 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
-+..+..|+.++..++.+-.....+...|-.-...|..|....|.-|
T Consensus 33 ~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLL 79 (86)
T 1x8y_A 33 SRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLL 79 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34455555666666666655555555555555555555655555444
No 358
>4dci_A Uncharacterized protein; PSI-biology, midwest center for structural genomics, MCSG, S genomics, unknown function; 2.82A {Synechococcus SP}
Probab=24.20 E-value=3.4e+02 Score=23.87 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHhh-cccccch
Q 016182 305 NSEKLRQENAALLEKLKSAQ-LGNKQEI 331 (394)
Q Consensus 305 e~~~L~~EN~~Lr~~L~~lq-l~~~~E~ 331 (394)
+..++...-..|..+|..++ |....|+
T Consensus 85 ek~~r~e~k~~l~~ql~qv~~L~lGsEv 112 (150)
T 4dci_A 85 KRSELEEQKRNLLQQQAQVRELEMDQIV 112 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcCEE
Confidence 44445555556666665553 4444444
No 359
>1hwt_C Protein (heme activator protein); transcription factor, asymmetry, GAL4, complex activator/DNA, gene regulation/DNA complex; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 2hap_C* 1qp9_A* 1pyc_A
Probab=23.61 E-value=43 Score=25.03 Aligned_cols=23 Identities=26% Similarity=0.307 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 016182 273 RKQAEAEELSRKVDSLIDENASL 295 (394)
Q Consensus 273 RKq~~leeLe~rV~~L~~EN~~L 295 (394)
.+..+++.|+.+|..|+.....|
T Consensus 55 ~~~~~~~~L~~ri~~LE~~l~~l 77 (81)
T 1hwt_C 55 LKDNELKKLRERVKSLEKTLSKV 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHTTC---
T ss_pred chHHHHHHHHHHHHHHHHHHHHh
Confidence 35567888888888877655544
No 360
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=23.52 E-value=2.8e+02 Score=21.98 Aligned_cols=52 Identities=13% Similarity=0.209 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 273 RKQAEAEELSRKVDSLID-------------------ENASLKSEINQLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 273 RKq~~leeLe~rV~~L~~-------------------EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+-..++++|+..+..|.. ....+..++..+..++..|..+...|..++..++
T Consensus 28 ~l~~~i~~l~~~l~~l~~~g~~CPvCgs~l~~~~~~~~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~ 98 (112)
T 1l8d_A 28 ELKNKIGDLKTAIEELKKAKGKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDRKSELERELRRID 98 (112)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEECTTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456666666666543 2234455556666666666666666666665553
No 361
>3m0a_A TNF receptor-associated factor 2; TRAF2: CIAP2 and the TRAF1: TRAF2: CIAP2 complexes, apoptosi coil, cytoplasm, metal-binding; 2.61A {Homo sapiens} PDB: 3m0d_A 3m06_A
Probab=23.51 E-value=2.2e+02 Score=20.87 Aligned_cols=27 Identities=15% Similarity=-0.005 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 282 SRKVDSLIDENASLKSEINQLSENSEK 308 (394)
Q Consensus 282 e~rV~~L~~EN~~L~~ei~~L~ee~~~ 308 (394)
+.-+..+..+...+..++..+.+++..
T Consensus 18 e~iv~~l~~~v~~~~~~le~~~~q~~~ 44 (66)
T 3m0a_A 18 ENIVCVLNREVERVAMTAEACSRQHRL 44 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhhH
Confidence 333333434444444444444444333
No 362
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=23.49 E-value=2.7e+02 Score=25.05 Aligned_cols=41 Identities=20% Similarity=0.304 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 281 LSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
|+..+.....+|..|-.+++.|+-++..|...-.....+|.
T Consensus 115 L~e~L~~q~~~~relERemnsLKPeL~qL~K~rD~yl~wL~ 155 (170)
T 3l4q_C 115 LEQELRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLT 155 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 33444444444445555555555554444444444444443
No 363
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=23.43 E-value=2.9e+02 Score=23.52 Aligned_cols=16 Identities=25% Similarity=0.335 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 016182 305 NSEKLRQENAALLEKL 320 (394)
Q Consensus 305 e~~~L~~EN~~Lr~~L 320 (394)
++..|..+-..++.+|
T Consensus 72 ~y~~l~k~Y~~~~keL 87 (119)
T 3etw_A 72 QYQELASKYEDALKKL 87 (119)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444333333
No 364
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=23.23 E-value=1.6e+02 Score=22.19 Aligned_cols=28 Identities=25% Similarity=0.457 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 295 LKSEINQLSENSEKLRQENAALLEKLKS 322 (394)
Q Consensus 295 L~~ei~~L~ee~~~L~~EN~~Lr~~L~~ 322 (394)
|...+=.|+.+...|..||..|+.-|.+
T Consensus 8 lVDtVYaLkDqV~eL~qe~k~m~k~lEe 35 (56)
T 2w6b_A 8 LVDTVYALKDEVQELRQDNKKMKKSLEE 35 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444445444444433
No 365
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=23.17 E-value=93 Score=31.63 Aligned_cols=47 Identities=13% Similarity=0.048 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLK 321 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~ 321 (394)
.+++..|+..+.........|+..+.....++..|+.....|..+..
T Consensus 90 l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~~~~ 136 (411)
T 3ghg_C 90 LEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQ 136 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444455555555666666666666666666666666666666543
No 366
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=23.16 E-value=1.1e+02 Score=20.52 Aligned_cols=24 Identities=21% Similarity=0.403 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 287 SLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 287 ~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
.|+.+...|..-++.|+++++.|+
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle 26 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLE 26 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555554
No 367
>3k66_A Beta-amyloid-like protein; X-RAY amyloid precursor protein, heparin binding, alternative splicing, developmental protein, differentiation; 2.70A {Caenorhabditis elegans} PDB: 3k6b_A*
Probab=23.07 E-value=4.9e+02 Score=24.68 Aligned_cols=80 Identities=15% Similarity=0.253 Sum_probs=51.0
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHH----HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcccccchhcccccCCCC
Q 016182 268 RRSRLRK-QAEAEELSRKVDSLIDENA----SLKSE-INQLSENSEKLRQENAALLEKLKSAQLGNKQEIVLNEDKRVTP 341 (394)
Q Consensus 268 RRSR~RK-q~~leeLe~rV~~L~~EN~----~L~~e-i~~L~ee~~~L~~EN~~Lr~~L~~lql~~~~E~~~~~~~~~~p 341 (394)
.|.|.-| ..++++++.++..|....- .++.+ +...++.+..|+.|+..-|++|.+..+.. -++.+++ .-.
T Consensus 29 hr~km~kVMkEW~Eae~q~k~l~kaDpk~Ae~~k~~m~~rFQ~~v~sLEqE~a~ErqqL~etH~qR-V~a~LNe---rrr 104 (239)
T 3k66_A 29 HRKKVDKVMKEWGDLETRYNEQKAKDPKGAEKFKSQMNARFQKTVSSLEEEHKRMRKEIEAVHEER-VQAMLNE---KKR 104 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHHH---HHH
Confidence 3444444 5678999999999988763 23333 34577788899999999999998764322 1222221 112
Q ss_pred chhhhhhhhc
Q 016182 342 VSTENLLSRV 351 (394)
Q Consensus 342 ~~~e~lls~~ 351 (394)
+..++|+..|
T Consensus 105 ~Ale~y~~AL 114 (239)
T 3k66_A 105 DATHDYRQAL 114 (239)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3567777666
No 368
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=22.96 E-value=1.7e+02 Score=22.54 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=24.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 254 LKRERRKQSNRESARRSRLRKQAEAEELSRKVDSL 288 (394)
Q Consensus 254 ~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L 288 (394)
+|+.+|+..-.+..||-|.|=...+++|..-|-..
T Consensus 4 ~k~~~rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~ 38 (73)
T 4h10_A 4 GRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC 38 (73)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHcccc
Confidence 34556666666777888877788888888777653
No 369
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain, protein-protein interaction, microtubule BIN cytoskeleton, protein binding; 2.30A {Homo sapiens} SCOP: a.245.1.1
Probab=22.80 E-value=1.5e+02 Score=23.74 Aligned_cols=22 Identities=27% Similarity=0.238 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEI 299 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei 299 (394)
+.+|...|+.|+.|-.-.-.+|
T Consensus 10 i~eLk~~ve~lEkERDFYF~KL 31 (82)
T 3tq7_B 10 LVDLKLTVDGLEKERDFYFSKL 31 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444433333333
No 370
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=22.71 E-value=6e+02 Score=26.10 Aligned_cols=10 Identities=10% Similarity=0.202 Sum_probs=6.4
Q ss_pred CCchhhhhhh
Q 016182 340 TPVSTENLLS 349 (394)
Q Consensus 340 ~p~~~e~lls 349 (394)
.+.++.+++.
T Consensus 212 ~~~dC~di~~ 221 (464)
T 1m1j_B 212 SGRECEDIYR 221 (464)
T ss_dssp CBSSHHHHHH
T ss_pred CCCCHHHHHh
Confidence 4556777764
No 371
>1no4_A Late, head morphogenesis protein; coiled-coil, viral protein; 2.20A {Bacillus phage PHI29} SCOP: h.1.24.1 PDB: 1noh_A
Probab=22.62 E-value=2.4e+02 Score=22.84 Aligned_cols=68 Identities=24% Similarity=0.288 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcccccchhcc--cccCCCCchhhhh
Q 016182 280 ELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA--QLGNKQEIVLN--EDKRVTPVSTENL 347 (394)
Q Consensus 280 eLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l--ql~~~~E~~~~--~~~~~~p~~~e~l 347 (394)
+-..-+.+|+...-....+...|....++|.+||..|-.--..+ |++..++-.-. ++.-.-.+..|+|
T Consensus 23 erte~lqqlr~~y~s~~se~~dlt~s~ekl~ae~~dlivsnsklfrqig~t~~~ee~~k~~~~setitiedl 94 (97)
T 1no4_A 23 ERTEALQQLRVNYGSFVSEYNDLTKSHEKLAAEKDDLIVSNSKLFRQIGLTEKQEEDHKKADISETITIEDL 94 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhccCCeeeecHHHHHHhccchhhHHHHHHHHhhcceeHHhh
No 372
>3n7n_E Monopolin complex subunit LRS4; meiosis, rDNA, replication; 3.90A {Saccharomyces cerevisiae}
Probab=22.51 E-value=18 Score=29.97 Aligned_cols=31 Identities=35% Similarity=0.431 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 288 LIDENASLKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 288 L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
+..|.-.|+.+|..|..++..+..||..||+
T Consensus 41 ~~~Etl~LQrQv~qLt~~lQ~~~~Ene~Lke 71 (95)
T 3n7n_E 41 VVDETLFLQRQIAQLNKQLQLSFQENEKLLS 71 (95)
T ss_dssp -------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666666666666666666666654
No 373
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=22.05 E-value=98 Score=27.97 Aligned_cols=31 Identities=6% Similarity=0.012 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 281 LSRKVDSLIDENASLKSEINQLSENSEKLRQ 311 (394)
Q Consensus 281 Le~rV~~L~~EN~~L~~ei~~L~ee~~~L~~ 311 (394)
|+..+..+......++.+|..|.+++..|+.
T Consensus 41 ~~~h~~~~~~~i~~~~~~i~~~~~~l~~l~~ 71 (228)
T 1flk_A 41 LESQLSRHDQMLSVHDIRLADMDLRFQVLET 71 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5555666655555566666666555555543
No 374
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=21.87 E-value=3.3e+02 Score=23.59 Aligned_cols=19 Identities=26% Similarity=0.134 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 016182 306 SEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 306 ~~~L~~EN~~Lr~~L~~lq 324 (394)
+..-.-|...|+.++.+++
T Consensus 88 vkkq~yEI~dL~~rV~Dl~ 106 (133)
T 1j1d_C 88 VTKNITEIADLTQKIFDLR 106 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHcchHHHHHHHHHHHHH
Confidence 3333456777777777664
No 375
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=21.75 E-value=3.4e+02 Score=22.36 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016182 285 VDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 285 V~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~l 323 (394)
|+.|+.+...=..+|..|++.+..+..++..|..++..+
T Consensus 56 le~lk~eL~~~~~el~~lq~~l~~~~~~~~~l~~~~~~l 94 (107)
T 2no2_A 56 LESLKQELATSQRELQVLQGSLETSAQSEANWAAEFAEL 94 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444455556666666677777777777554
No 376
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=21.46 E-value=3.5e+02 Score=28.84 Aligned_cols=19 Identities=32% Similarity=0.228 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 016182 274 KQAEAEELSRKVDSLIDEN 292 (394)
Q Consensus 274 Kq~~leeLe~rV~~L~~EN 292 (394)
+-..+++|+.++..|+.+.
T Consensus 399 ~p~~l~~~~~~~~~~~~~~ 417 (854)
T 1qvr_A 399 APEEIDALERKKLQLEIER 417 (854)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHH
Confidence 3455666666666555443
No 377
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=21.15 E-value=2.1e+02 Score=22.39 Aligned_cols=13 Identities=15% Similarity=0.488 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLID 290 (394)
Q Consensus 278 leeLe~rV~~L~~ 290 (394)
|++|+..|+.|..
T Consensus 34 l~~L~~~v~~L~~ 46 (103)
T 4i0x_B 34 LDQLESRAQKLVQ 46 (103)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 3344444444333
No 378
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=21.12 E-value=1.7e+02 Score=26.48 Aligned_cols=36 Identities=17% Similarity=0.301 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 266 SARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQ 301 (394)
Q Consensus 266 SARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~ 301 (394)
-|-|+-.+.+.+++.||.++...+.++..+..++.+
T Consensus 132 ~AertV~kLqkeiD~LEDeL~~eKek~k~i~~eLDq 167 (175)
T 3mud_A 132 YCLDTTAKNEKSIDDLEEKVAHAKEENLNMHQMLDQ 167 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555556666666666666666666665555443
No 379
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=20.90 E-value=2.9e+02 Score=27.61 Aligned_cols=45 Identities=22% Similarity=0.348 Sum_probs=22.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Q 016182 258 RRKQSNRESARRSRLRKQAEAEELSRKVDSLID------ENASLKSEINQL 302 (394)
Q Consensus 258 RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~------EN~~L~~ei~~L 302 (394)
++..+.|....+......++++.|+.++..+.. |...|..++..|
T Consensus 189 ~~~~~~~~~l~~~~~~~~~~l~~l~~ql~ei~~~~l~~~E~e~L~~~~~~L 239 (517)
T 4ad8_A 189 REAVSRLERLQASQRERARQIDLLAFQVQEISEVSPDPGEEEGLNTELSRL 239 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 344444444333333344556666666666555 445555444444
No 380
>3t97_B Nuclear pore complex protein NUP54; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=20.88 E-value=2.4e+02 Score=21.74 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSENSEKL 309 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L 309 (394)
+.+|+-++.++..|+..-.....+|.+.++++.+|
T Consensus 9 ~~~Ld~i~~el~eLq~~~~~~~aki~e~krkl~eL 43 (65)
T 3t97_B 9 QTRLDIISEDISELQKNQTTTMAKIAQYKRKLMDL 43 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555566666666666555556666655555555
No 381
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=20.82 E-value=1.2e+02 Score=21.55 Aligned_cols=15 Identities=13% Similarity=0.326 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHHHH
Q 016182 288 LIDENASLKSEINQL 302 (394)
Q Consensus 288 L~~EN~~L~~ei~~L 302 (394)
|+.....|..++..|
T Consensus 21 LE~Ri~~LE~KLd~L 35 (43)
T 2pnv_A 21 FEKRIVTLETKLETL 35 (43)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 382
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=20.82 E-value=2.4e+02 Score=23.83 Aligned_cols=33 Identities=12% Similarity=0.279 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKSEINQLSENSEKLR 310 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~ 310 (394)
++.|+.+++.|+.....|+.++..+...+.+|.
T Consensus 107 i~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~ 139 (151)
T 2zdi_C 107 LKEYDEAIKKTQGALAELEKRIGEVARKAQEVQ 139 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666666666666666666666665554
No 383
>1a93_A Coiled coil, LZ, MYC proto-oncogene protein; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Homo sapiens} SCOP: h.1.3.1 PDB: 2a93_A
Probab=20.79 E-value=1.8e+02 Score=19.87 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 016182 305 NSEKLRQENAALLEKLKS 322 (394)
Q Consensus 305 e~~~L~~EN~~Lr~~L~~ 322 (394)
+.+.|...+..|+.+|..
T Consensus 15 ekE~l~~r~eqL~~kLe~ 32 (34)
T 1a93_A 15 EEDLLRKRREQLKHKLEQ 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 333444455555555543
No 384
>4aj5_1 SKA3, spindle and kinetochore-associated protein 3; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=20.72 E-value=3.7e+02 Score=22.41 Aligned_cols=69 Identities=19% Similarity=0.144 Sum_probs=40.0
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 250 NERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKL 320 (394)
Q Consensus 250 dErE~KR~RRk~sNRESARRSR~RKq~~leeLe~rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L 320 (394)
=|+|-.|..|.+...+|--.. +-..-+-+|-.+|..|+.+.+.+..+...-.++.......-..|.++.
T Consensus 18 Le~Eta~L~~al~~edsd~E~--~~~rilhdl~seV~~LK~dv~~~L~k~~~e~qe~~~FIKa~kvL~~rn 86 (101)
T 4aj5_1 18 LDCETARLQRALDGEESDFED--YPMRILYDLHSEVQTLKDDINILLDKARLENQEGIDFIKATKVLMEKN 86 (101)
T ss_dssp HHHHHHHHHHHHHTCSSHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccchh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 456666666766666554432 444456677777777777666666655554555544444444444444
No 385
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=20.59 E-value=5.6e+02 Score=24.47 Aligned_cols=68 Identities=15% Similarity=0.221 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH----------------HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Q 016182 266 SARRSRLRKQAEAEELSRKV----------------DSL---IDENASLKSEINQLSENSEKLRQENAALLEKLKSAQ-- 324 (394)
Q Consensus 266 SARRSR~RKq~~leeLe~rV----------------~~L---~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~~L~~lq-- 324 (394)
+++++|.+=...++|++.-. ..| ...-..|+.++......|.....+-..++.+|....
T Consensus 134 ~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~~~K~lek~r~~EEea~~K~eeAd~~Y~~~V~~a~~~r~eL~~tk~~ 213 (279)
T 3qwe_A 134 ALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPGPSKQQERRRRSREEAQAKAQEAEALYQACVREANARQQDLEIAKQR 213 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCC-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 45677777777777776311 111 122233666777777777777777777777775542
Q ss_pred -cccccchhc
Q 016182 325 -LGNKQEIVL 333 (394)
Q Consensus 325 -l~~~~E~~~ 333 (394)
+....|+|+
T Consensus 214 ~v~~Lr~LI~ 223 (279)
T 3qwe_A 214 IVSHVRKLVF 223 (279)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 444445543
No 386
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=20.46 E-value=1.1e+02 Score=24.85 Aligned_cols=20 Identities=5% Similarity=0.139 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 016182 278 AEELSRKVDSLIDENASLKS 297 (394)
Q Consensus 278 leeLe~rV~~L~~EN~~L~~ 297 (394)
+..|+.++..|+.+...|..
T Consensus 6 l~~l~~~~~~l~~~l~~l~~ 25 (149)
T 1rtm_1 6 LANMEAEINTLKSKLELTNK 25 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 45555555555555444444
No 387
>1vcs_A Vesicle transport through interaction with T- snares homolog 1A; HABC domain, VTI1, UP and DOWN three helix bundle, LEFT-handed twist; NMR {Mus musculus} SCOP: a.47.2.1
Probab=20.45 E-value=3.4e+02 Score=21.82 Aligned_cols=49 Identities=12% Similarity=0.199 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHhh
Q 016182 276 AEAEELSRKVDSLIDENASLKSEIN--------QLSENSEKLRQENAALLEKLKSAQ 324 (394)
Q Consensus 276 ~~leeLe~rV~~L~~EN~~L~~ei~--------~L~ee~~~L~~EN~~Lr~~L~~lq 324 (394)
+.+.+.+..++....-...+.-|+. .+..++.....+...|+.++..++
T Consensus 38 ~~i~~ie~~l~EA~ell~qMelE~r~~p~~~R~~~~~klr~Yk~dL~~lk~elk~~~ 94 (102)
T 1vcs_A 38 QMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSR 94 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444333332 333444445555555666665544
No 388
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=20.42 E-value=1.1e+02 Score=21.39 Aligned_cols=21 Identities=24% Similarity=0.321 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASL 295 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L 295 (394)
++++..|+.+++.|+.|-..|
T Consensus 14 keQi~~l~~kl~~LkeEKHQL 34 (38)
T 2l5g_A 14 KEQILKLEEKLLALQEEKHQL 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
No 389
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=20.40 E-value=3.4e+02 Score=24.93 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 271 RLRKQAEAEELSRKVDSLIDENASLKSEINQ 301 (394)
Q Consensus 271 R~RKq~~leeLe~rV~~L~~EN~~L~~ei~~ 301 (394)
+.||.+-++-|..++..|+.+-..|..++..
T Consensus 14 ~~Kk~ELi~~L~~kL~~L~~eqe~l~ee~~~ 44 (190)
T 3thf_A 14 KQKMDELIKHLNQKIVSLKREQQTISEECSA 44 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888888888877777654
No 390
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=20.35 E-value=95 Score=29.90 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 275 QAEAEELSRKVDSLIDENASLKSEINQLSEN 305 (394)
Q Consensus 275 q~~leeLe~rV~~L~~EN~~L~~ei~~L~ee 305 (394)
.++++.|+.+.+.|+.|..+|..++..++..
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k~ 214 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANKA 214 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4577788888888888887777777666553
No 391
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=20.14 E-value=3.3e+02 Score=23.65 Aligned_cols=21 Identities=19% Similarity=0.181 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 016182 303 SENSEKLRQENAALLEKLKSA 323 (394)
Q Consensus 303 ~ee~~~L~~EN~~Lr~~L~~l 323 (394)
+.+...++..|..|+.+|.+.
T Consensus 95 r~~~~~~e~r~~~L~~ql~e~ 115 (135)
T 2e7s_A 95 RMEKYAIEILNKRLTEQLREK 115 (135)
T ss_dssp THHHHHHHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345566677777777777654
No 392
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=20.04 E-value=2.6e+02 Score=24.89 Aligned_cols=35 Identities=17% Similarity=0.129 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016182 284 KVDSLIDENASLKSEINQLSENSEKLRQENAALLE 318 (394)
Q Consensus 284 rV~~L~~EN~~L~~ei~~L~ee~~~L~~EN~~Lr~ 318 (394)
+++.|+.|...++.+|..-++++++|..+...|+.
T Consensus 6 e~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafkn 40 (155)
T 2aze_A 6 ECQNLEVERQRRLERIKQKQSQLQELILQQIAFKN 40 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555555444444433
Done!