Query 016183
Match_columns 394
No_of_seqs 362 out of 2427
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 04:33:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016183.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016183hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00495 crvDNA_42K 42K curve 100.0 8.1E-93 1.7E-97 706.7 40.3 364 6-371 6-378 (389)
2 KOG2776 Metallopeptidase [Gene 100.0 7E-83 1.5E-87 600.9 30.3 375 1-376 1-386 (398)
3 PTZ00053 methionine aminopepti 100.0 3.8E-72 8.1E-77 561.9 34.7 309 6-332 145-467 (470)
4 PRK08671 methionine aminopepti 100.0 7.8E-72 1.7E-76 539.0 33.9 288 18-331 1-291 (291)
5 TIGR00501 met_pdase_II methion 100.0 8.9E-72 1.9E-76 539.1 34.2 291 16-331 2-295 (295)
6 cd01088 MetAP2 Methionine Amin 100.0 1.7E-70 3.7E-75 529.7 33.5 287 19-331 1-291 (291)
7 COG0024 Map Methionine aminope 100.0 6.7E-60 1.4E-64 439.6 29.0 251 11-333 3-253 (255)
8 KOG2738 Putative methionine am 100.0 8.8E-52 1.9E-56 381.3 23.4 248 10-332 113-360 (369)
9 PLN03158 methionine aminopepti 100.0 4.1E-50 9E-55 399.5 29.3 248 9-333 133-382 (396)
10 PRK12897 methionine aminopepti 100.0 3.6E-49 7.7E-54 373.4 28.5 247 11-332 2-248 (248)
11 PRK07281 methionine aminopepti 100.0 1.6E-48 3.5E-53 374.4 28.4 249 10-334 1-282 (286)
12 PRK12896 methionine aminopepti 100.0 4E-48 8.6E-53 367.4 29.1 249 8-332 5-255 (255)
13 PRK12318 methionine aminopepti 100.0 6.1E-48 1.3E-52 372.1 29.4 246 12-333 42-290 (291)
14 TIGR00500 met_pdase_I methioni 100.0 1.8E-47 3.8E-52 361.4 29.6 243 12-331 2-246 (247)
15 KOG2775 Metallopeptidase [Gene 100.0 1.6E-47 3.5E-52 353.1 24.5 310 6-332 72-394 (397)
16 PRK05716 methionine aminopepti 100.0 2E-46 4.4E-51 355.1 29.4 248 10-334 2-251 (252)
17 cd01086 MetAP1 Methionine Amin 100.0 4E-42 8.7E-47 323.0 28.7 238 19-331 1-238 (238)
18 PRK09795 aminopeptidase; Provi 100.0 2E-42 4.3E-47 344.3 27.5 198 8-227 122-325 (361)
19 cd01089 PA2G4-like Related to 100.0 1.1E-41 2.3E-46 318.5 25.3 222 19-331 1-228 (228)
20 PRK15173 peptidase; Provisiona 100.0 5.7E-41 1.2E-45 328.5 27.5 196 8-227 90-289 (323)
21 PRK10879 proline aminopeptidas 100.0 1.4E-40 3E-45 338.1 30.0 243 8-353 168-433 (438)
22 COG0006 PepP Xaa-Pro aminopept 100.0 6.3E-41 1.4E-45 336.2 26.8 196 8-226 149-349 (384)
23 PRK14575 putative peptidase; P 100.0 1.2E-39 2.6E-44 328.6 28.3 196 8-227 173-372 (406)
24 cd01090 Creatinase Creatine am 100.0 1.2E-39 2.6E-44 304.5 25.8 196 19-227 1-199 (228)
25 TIGR02993 ectoine_eutD ectoine 100.0 2.9E-39 6.2E-44 324.7 26.7 204 8-227 153-358 (391)
26 cd01087 Prolidase Prolidase. E 100.0 3.9E-39 8.5E-44 303.7 25.2 188 19-229 1-210 (243)
27 PRK14576 putative endopeptidas 100.0 9.1E-39 2E-43 322.2 28.3 196 8-227 172-371 (405)
28 PRK13607 proline dipeptidase; 100.0 3.3E-37 7.1E-42 313.0 24.9 204 8-228 156-389 (443)
29 cd01092 APP-like Similar to Pr 100.0 1.9E-36 4.1E-41 278.0 24.9 185 19-227 1-188 (208)
30 PF00557 Peptidase_M24: Metall 100.0 1.6E-35 3.4E-40 272.1 23.5 184 20-227 1-189 (207)
31 cd01085 APP X-Prolyl Aminopept 100.0 1.8E-35 3.9E-40 275.4 23.6 187 21-227 6-199 (224)
32 cd01091 CDC68-like Related to 100.0 4.2E-35 9.1E-40 276.0 22.2 192 19-227 1-207 (243)
33 cd01066 APP_MetAP A family inc 100.0 1.3E-34 2.8E-39 263.8 23.9 184 19-227 1-187 (207)
34 KOG2414 Putative Xaa-Pro amino 100.0 4.8E-32 1E-36 260.2 19.6 244 8-355 223-487 (488)
35 KOG2737 Putative metallopeptid 100.0 5.8E-32 1.3E-36 257.2 18.2 275 8-358 180-484 (492)
36 KOG1189 Global transcriptional 99.9 1E-22 2.3E-27 207.5 17.2 249 9-347 133-393 (960)
37 KOG2413 Xaa-Pro aminopeptidase 99.9 2.5E-20 5.5E-25 187.8 21.9 210 8-234 302-524 (606)
38 COG5406 Nucleosome binding fac 99.7 4E-16 8.7E-21 156.9 16.2 250 8-344 165-430 (1001)
39 cd01066 APP_MetAP A family inc 96.8 0.018 4E-07 51.6 12.1 102 20-130 102-204 (207)
40 cd01091 CDC68-like Related to 96.7 0.025 5.5E-07 53.4 12.0 105 20-130 119-234 (243)
41 cd01092 APP-like Similar to Pr 96.5 0.039 8.6E-07 50.1 11.8 100 20-130 103-205 (208)
42 PRK05716 methionine aminopepti 96.2 0.073 1.6E-06 50.1 12.1 101 21-130 119-240 (252)
43 TIGR02993 ectoine_eutD ectoine 96.2 0.062 1.3E-06 54.3 12.0 101 21-129 271-373 (391)
44 cd01090 Creatinase Creatine am 96.2 0.074 1.6E-06 49.6 11.8 103 21-130 110-220 (228)
45 TIGR00500 met_pdase_I methioni 96.1 0.094 2E-06 49.3 12.3 102 21-130 117-238 (247)
46 PLN03158 methionine aminopepti 96.1 0.03 6.6E-07 56.6 9.3 101 118-228 127-232 (396)
47 PRK12318 methionine aminopepti 96.1 0.068 1.5E-06 51.9 11.4 88 21-117 159-248 (291)
48 cd01087 Prolidase Prolidase. E 96.0 0.1 2.3E-06 48.9 12.3 109 21-130 104-235 (243)
49 PRK12896 methionine aminopepti 96.0 0.1 2.2E-06 49.2 12.2 101 21-130 124-246 (255)
50 KOG2738 Putative methionine am 95.9 0.033 7.2E-07 53.2 8.1 84 136-227 124-210 (369)
51 PRK12897 methionine aminopepti 95.9 0.072 1.6E-06 50.3 10.5 102 21-130 118-239 (248)
52 cd01086 MetAP1 Methionine Amin 95.7 0.2 4.3E-06 46.7 12.4 101 21-130 109-230 (238)
53 PRK09795 aminopeptidase; Provi 95.6 0.16 3.4E-06 50.7 12.2 105 16-129 236-341 (361)
54 PRK07281 methionine aminopepti 95.6 0.12 2.6E-06 50.0 10.7 100 21-129 149-270 (286)
55 cd01088 MetAP2 Methionine Amin 95.4 0.1 2.2E-06 50.6 9.7 81 136-227 3-84 (291)
56 PRK14575 putative peptidase; P 95.3 0.19 4.1E-06 51.1 11.7 100 21-130 286-389 (406)
57 PF00557 Peptidase_M24: Metall 95.3 0.22 4.8E-06 45.2 11.1 97 21-129 103-206 (207)
58 PRK15173 peptidase; Provisiona 94.8 0.38 8.2E-06 47.4 11.9 100 20-129 202-305 (323)
59 COG0024 Map Methionine aminope 94.7 0.18 4E-06 47.8 8.9 86 136-228 13-101 (255)
60 cd01089 PA2G4-like Related to 94.6 0.34 7.3E-06 45.1 10.5 99 20-130 120-220 (228)
61 PRK08671 methionine aminopepti 94.5 0.34 7.3E-06 47.0 10.6 98 21-129 102-205 (291)
62 PRK14576 putative endopeptidas 94.4 0.53 1.2E-05 47.8 12.3 103 20-130 284-388 (405)
63 TIGR00495 crvDNA_42K 42K curve 93.8 0.52 1.1E-05 47.7 10.7 104 21-128 139-248 (389)
64 TIGR00501 met_pdase_II methion 93.6 0.54 1.2E-05 45.7 10.0 100 22-128 106-207 (295)
65 COG0006 PepP Xaa-Pro aminopept 93.4 0.84 1.8E-05 45.9 11.4 100 21-130 263-367 (384)
66 PRK10879 proline aminopeptidas 91.8 2.1 4.5E-05 44.1 11.9 107 21-129 283-410 (438)
67 PTZ00053 methionine aminopepti 91.5 1.3 2.8E-05 45.7 10.0 102 21-128 264-375 (470)
68 cd01085 APP X-Prolyl Aminopept 84.8 20 0.00042 33.3 12.3 97 22-129 113-215 (224)
69 PRK13607 proline dipeptidase; 84.4 6.1 0.00013 40.7 9.6 38 22-59 270-307 (443)
70 KOG1189 Global transcriptional 81.3 7.3 0.00016 42.1 8.6 103 21-131 258-369 (960)
71 KOG2775 Metallopeptidase [Gene 71.2 43 0.00093 32.6 10.0 111 135-261 86-201 (397)
72 cd01666 TGS_DRG_C TGS_DRG_C: 68.5 17 0.00037 27.8 5.6 20 40-59 21-40 (75)
73 KOG2776 Metallopeptidase [Gene 61.4 59 0.0013 32.4 9.1 38 136-173 23-60 (398)
74 PF00254 FKBP_C: FKBP-type pep 51.4 32 0.00069 26.7 4.7 51 99-160 3-60 (94)
75 PF11434 CHIPS: Chemotaxis-inh 38.5 27 0.00059 26.1 2.2 25 310-334 24-50 (91)
76 COG5406 Nucleosome binding fac 36.6 1.2E+02 0.0027 32.5 7.3 73 31-113 309-385 (1001)
77 PF07305 DUF1454: Protein of u 35.5 3.2E+02 0.0069 24.8 8.8 74 135-226 115-188 (200)
78 PRK01490 tig trigger factor; P 33.9 1.8E+02 0.0039 29.7 8.2 33 98-130 155-191 (435)
79 cd04938 TGS_Obg-like TGS_Obg-l 33.6 71 0.0015 24.3 3.9 47 40-109 28-74 (76)
80 cd01669 TGS_Ygr210_C TGS_Ygr21 30.5 1.1E+02 0.0023 23.4 4.5 48 40-109 27-74 (76)
81 TIGR00115 tig trigger factor. 30.3 2.1E+02 0.0046 28.8 8.0 33 98-130 144-180 (408)
82 cd06396 PB1_NBR1 The PB1 domai 29.0 55 0.0012 25.5 2.6 35 260-294 25-65 (81)
83 PF07277 SapC: SapC; InterPro 28.9 2E+02 0.0044 26.6 6.9 67 215-304 97-166 (221)
84 PRK10354 RNA chaperone/anti-te 27.6 63 0.0014 24.1 2.7 48 73-120 15-64 (70)
85 COG5562 Phage envelope protein 26.0 2.8E+02 0.006 23.8 6.5 57 257-334 8-64 (137)
86 PF00313 CSD: 'Cold-shock' DNA 25.6 98 0.0021 22.3 3.4 48 74-121 12-61 (66)
87 PRK15463 cold shock-like prote 25.5 62 0.0013 24.2 2.3 47 73-119 15-63 (70)
88 COG1504 Uncharacterized conser 25.4 64 0.0014 26.6 2.5 42 313-354 17-60 (121)
89 PRK09937 stationary phase/star 24.5 75 0.0016 24.1 2.6 47 73-119 12-60 (74)
90 PRK09890 cold shock protein Cs 24.4 77 0.0017 23.7 2.7 47 74-120 16-64 (70)
91 TIGR03516 ppisom_GldI peptidyl 23.8 4.2E+02 0.0091 23.6 7.8 53 98-161 83-141 (177)
92 PF07808 RED_N: RED-like prote 23.5 55 0.0012 30.8 2.1 29 211-245 164-193 (238)
93 PRK13032 chemotaxis-inhibiting 23.1 61 0.0013 26.3 2.0 48 270-334 59-108 (149)
94 cd03015 PRX_Typ2cys Peroxiredo 22.8 49 0.0011 28.9 1.6 51 300-354 94-155 (173)
95 PF05184 SapB_1: Saposin-like 22.6 1.9E+02 0.0041 18.3 4.0 33 25-57 3-35 (39)
96 PRK09507 cspE cold shock prote 21.6 88 0.0019 23.3 2.5 48 73-120 14-63 (69)
97 KOG2414 Putative Xaa-Pro amino 20.7 5.1E+02 0.011 26.6 8.2 88 28-115 345-438 (488)
98 PF07315 DUF1462: Protein of u 20.7 2.4E+02 0.0051 22.5 4.7 55 256-313 15-79 (93)
No 1
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=8.1e-93 Score=706.70 Aligned_cols=364 Identities=62% Similarity=0.946 Sum_probs=332.3
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCC
Q 016183 6 REEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVN 85 (394)
Q Consensus 6 ~~~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n 85 (394)
+++.+..||+++||++||+||+|++++++.+.+.++||+|+.|||+.++++|.++++..|.+.+ .++.|++||+|+|+|
T Consensus 6 ~~~~~~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~-~~~~g~afpt~vSvN 84 (389)
T TIGR00495 6 QQEQAYSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEK-EMEKGIAFPTCISVN 84 (389)
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccc-cccCCCCCCeEEecC
Confidence 4566779999999999999999999999999999999999999999999999999888776532 256799999999999
Q ss_pred CcccCCCCCCCC-CccccCCCEEEEEeeeEECceEEeEEEEEEeCC---CCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 016183 86 NTLCHFSPLASD-ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQD---GPVTGRAADVIAAANTAAEVALRLVRPGKKN 161 (394)
Q Consensus 86 ~~~~H~~P~~~~-~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~---~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~ 161 (394)
++++||+|..++ +++|++||+|+||+|+++|||++|++|||+||+ .+++++++++++++++|++++++++|||+++
T Consensus 85 ~~v~H~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~ 164 (389)
T TIGR00495 85 NCVGHFSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTN 164 (389)
T ss_pred CeeeCCCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcH
Confidence 999999997544 488999999999999999999999999999994 2367899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCC--CCCCCceeeCCcEEEEceeeecCCCCCcccCCC
Q 016183 162 KDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPD--TRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEK 239 (394)
Q Consensus 162 ~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~--~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~ 239 (394)
+||+++++++++++||.++++++|||||+++||+.+.|+++++.. .++.+.+|++||||+|||++++|+|+++..+++
T Consensus 165 ~dI~~ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~ 244 (389)
T TIGR00495 165 TQVTEAINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQR 244 (389)
T ss_pred HHHHHHHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCe
Confidence 999999999999999999999999999999999555765554432 234678999999999999999999999886664
Q ss_pred ceEEEecccccccccCchhHHHHHHHHHhhCCCCcccccc-chhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEE
Q 016183 240 QTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARA-LEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFT 318 (394)
Q Consensus 240 ~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~-~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~T 318 (394)
||||+|+.+.+|+|||++||++|++|+++|++|||++|| +|+++++|||+||++||+|.|||||++++|++||||+||
T Consensus 245 -~tiy~~~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~T 323 (389)
T TIGR00495 245 -TTIYKRDPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFT 323 (389)
T ss_pred -eEEEEECCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999 578899999999999999999999999999999999999
Q ss_pred EEEcCCCceeecCCCC--ccccCCCCCCcHHHHHHHHccccccccCCCCCcCCCC
Q 016183 319 VLLMPNGSDRITSHTL--QEIQSTKTIDDPEIKAWLALGIKTKKKGGGKKKKGKK 371 (394)
Q Consensus 319 vlvt~~G~~~lT~~~~--~~~~s~~~~~d~e~~~ll~~~~~~~~~~~~~~~~~~~ 371 (394)
|+|++||+.+||+.|+ ++++|+++++||||++||++|++++|+|||+++++++
T Consensus 324 v~v~~~g~~~~t~~~~~~~~~~s~~~~~d~~~~~~l~~~~~~~~~~~~~~~~~~~ 378 (389)
T TIGR00495 324 VLLMPNGPMRITSGEFEPDLYKSEMEVQDPEIKALLASPIKRKKQKKKAKKASKT 378 (389)
T ss_pred EEECCCCcEEeCCCCCCHhhcCCCCCCCCHHHHHHHhCccccccccccccccccc
Confidence 9999999999999764 8899999999999999999999888777777766644
No 2
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=100.00 E-value=7e-83 Score=600.90 Aligned_cols=375 Identities=56% Similarity=0.884 Sum_probs=347.6
Q ss_pred CCCcH--HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCccc
Q 016183 1 MSDDE--REEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAF 78 (394)
Q Consensus 1 ~~~~~--~~~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~af 78 (394)
||+.+ .++++..|-++..+.+||.||+|++++|+.+.+.|+||++..|||..+|.+|.++.++.|++++. ..+|++|
T Consensus 1 mss~d~~~~~~d~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~-~~KGIAf 79 (398)
T KOG2776|consen 1 MSSHDETITEKDKTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKD-FEKGIAF 79 (398)
T ss_pred CCcccccccccccccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhh-hhccccc
Confidence 56553 25678899999999999999999999999999999999999999999999999999999998654 7799999
Q ss_pred ceeecCCCcccCCCCCCCC-CccccCCCEEEEEeeeEECceEEeEEEEEEeCCC---CCCHHHHHHHHHHHHHHHHHHHH
Q 016183 79 PSCVSVNNTLCHFSPLASD-ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDG---PVTGRAADVIAAANTAAEVALRL 154 (394)
Q Consensus 79 p~~vs~n~~~~H~~P~~~~-~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~---~~s~~~~~l~~a~~~a~~a~i~~ 154 (394)
|||||+|+|+|||+|..+| +..|++||+|+||+|+|+|||++.++||++|+.. |++++.+|++.+++.|.++++++
T Consensus 80 PT~Isvnncv~h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rl 159 (398)
T KOG2776|consen 80 PTSISVNNCVCHFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRL 159 (398)
T ss_pred cceecccceeeccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999877 6899999999999999999999999999999854 48999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCC--CCCceeeCCcEEEEceeeecCCCC
Q 016183 155 VRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTR--VDDAEFEENEVYAVDIVTSTGDGK 232 (394)
Q Consensus 155 lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~--~~~~~le~GmV~aIEp~is~g~g~ 232 (394)
++||++...|+++|.+++.+++|.++.+++.|++-+++++|.+.|++++++.++ .+...+++++||+++..+++|.|.
T Consensus 160 lkpgn~n~~vT~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~ 239 (398)
T KOG2776|consen 160 LKPGNTNTQVTRAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGS 239 (398)
T ss_pred hCCCCCCchhhHHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCc
Confidence 999999999999999999999999999999999999999999999999887665 467899999999999999999998
Q ss_pred CcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCcccccc-chhhhhhhHHHHHHHCCCccccCeeeecCCce
Q 016183 233 PKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARA-LEEKRARLGLVECVNHELLQPYPVLHEKPGDY 311 (394)
Q Consensus 233 ~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~-~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~ 311 (394)
.+..++..+|+|.++.+.+|+||||+||++|++|+++|+.|||++|+ +.+.++||||+||++|+||.|||||++++|++
T Consensus 240 ~K~~~~~~~t~y~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~ 319 (398)
T KOG2776|consen 240 PKEGDDRAPTIYYKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEF 319 (398)
T ss_pred ccccccccceeEEeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcch
Confidence 88777766999999999999999999999999999999999999999 46669999999999999999999999999999
Q ss_pred eEEEEEEEEEcCCCceeecCCCC--ccccCCCCCCcHHHHHHHHccccccccCCCCCcCCCCCCccc
Q 016183 312 VAHIKFTVLLMPNGSDRITSHTL--QEIQSTKTIDDPEIKAWLALGIKTKKKGGGKKKKGKKGDKAE 376 (394)
Q Consensus 312 ~aq~e~Tvlvt~~G~~~lT~~~~--~~~~s~~~~~d~e~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 376 (394)
+|||++|||++|||..+||+.|+ ++++|+++|+|+|++.||+++.+.+++|+|++++.+..+.++
T Consensus 320 vaqfk~TvllmPng~~~l~~~p~~~~~~~sd~~Ved~e~~alL~~~i~~~~~k~k~k~~~k~~~~~~ 386 (398)
T KOG2776|consen 320 VAQFKFTVLLMPNGSLRLTGSPFKPDKYKSDLSVEDPELKALLCSGIKVKPKKKKKKKASKTAEAAT 386 (398)
T ss_pred hhheeeEEEeccCCCccccCCCCCcccccccccccCHHHHHHhhcccccCCCcccccccccccccCc
Confidence 99999999999999999999887 999999999999999999999877777777666666544443
No 3
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=3.8e-72 Score=561.94 Aligned_cols=309 Identities=27% Similarity=0.453 Sum_probs=278.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCC
Q 016183 6 REEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVN 85 (394)
Q Consensus 6 ~~~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n 85 (394)
++.+.+..++++||++||+||+|++++++.+.+.|+||+|+.|||..++..+++..... +...+++||+|+|+|
T Consensus 145 ~e~~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~------G~~~g~aFPt~vS~N 218 (470)
T PTZ00053 145 EEKRELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEAD------GLKCGWAFPTGCSLN 218 (470)
T ss_pred hhhCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhc------CCcccCCCCceeecC
Confidence 45666777899999999999999999999999999999999999999998887653210 122478999999999
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
++++||+|+.+++++|++||+|+||+|++|+||++|++|||++| ++++++++++++|++++|++++||++++||+
T Consensus 219 ~~aaH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg-----~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~ 293 (470)
T PTZ00053 219 HCAAHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN-----PKYDPLLQATKDATNTGIKEAGIDVRLSDIG 293 (470)
T ss_pred ccccCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC-----HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999866678999999999999999999999999999997 5789999999999999999999999999999
Q ss_pred HHHHHHHHHCCC---------ccccCcccccccc-ccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcc
Q 016183 166 EAIQKVAAAHDC---------KIVEGVLSHQLKQ-FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKL 235 (394)
Q Consensus 166 ~ai~~~~~~~G~---------~~~~~~~GHgiG~-~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~ 235 (394)
++|+++++++|| .++.+++|||||+ .+|++| .||++.. +...+|++||||+|||++++|+|.++.
T Consensus 294 ~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k-~iP~v~~----~~~~~LeeGmVfaIEPf~stG~G~v~~ 368 (470)
T PTZ00053 294 AAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGK-SVPIVKG----GENTRMEEGELFAIETFASTGRGYVNE 368 (470)
T ss_pred HHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCC-cCCeeCC----CCCCEecCCCEEEEcceeeCCCCeEec
Confidence 999999999996 4679999999998 677766 6766543 356799999999999999999999964
Q ss_pred cCCCceEEEecccccc-cccCchhHHHHHHHHHhhCCCCccccccc-h--hhhhhhHHHHHHHCCCccccCeeeecCCce
Q 016183 236 LDEKQTTIYKRAVDKN-YHLKMKASRFIFSEINQKFPIMPFTARAL-E--EKRARLGLVECVNHELLQPYPVLHEKPGDY 311 (394)
Q Consensus 236 ~~~~~~tv~~~~~~~~-y~lk~~~~r~~~~~i~~~~~~~pf~~r~~-~--~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~ 311 (394)
+.++|||+++.+.+ |+|||++||+||++|+++|++|||++||+ + +.+++|||+||++||+|+|||||++++|++
T Consensus 369 --~~~~siY~~~~~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~ 446 (470)
T PTZ00053 369 --DLECSHYMKDPGAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSY 446 (470)
T ss_pred --CCCceeeeEcCcCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHHHHHHHHHCCCcccCCccCccCCCE
Confidence 56699999988876 49999999999999999999999999994 3 568999999999999999999999999999
Q ss_pred eEEEEEEEEEcCCCceeecCC
Q 016183 312 VAHIKFTVLLMPNGSDRITSH 332 (394)
Q Consensus 312 ~aq~e~Tvlvt~~G~~~lT~~ 332 (394)
||||||||||+++|.++||..
T Consensus 447 VAQfehTvll~p~~~~vis~g 467 (470)
T PTZ00053 447 TSQMEHTILLRPTCKEVLSRG 467 (470)
T ss_pred EeEEEEEEEECCCCCEecCCC
Confidence 999999999999999999964
No 4
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=7.8e-72 Score=539.04 Aligned_cols=288 Identities=30% Similarity=0.488 Sum_probs=265.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCC
Q 016183 18 VVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASD 97 (394)
Q Consensus 18 EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~ 97 (394)
+|++||+|++|++++++.+.+.++||+|+.|||+.++..+.+.|+ +++||+|+|.|+..+||+|.+++
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~------------~~afp~~vs~n~~~~H~~p~~~d 68 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGA------------KPAFPCNISINEVAAHYTPSPGD 68 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCC------------ccCCCCEEeeCCCccCCCCCCCC
Confidence 489999999999999999999999999999999999999988753 57899999999999999998666
Q ss_pred CccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCC
Q 016183 98 ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDC 177 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~ 177 (394)
++.|++||+|+||+|++|+||++|++||+++| ++++++++++++|++++++++|||++++||+++++++++++||
T Consensus 69 ~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG-----~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~ 143 (291)
T PRK08671 69 ERVFPEGDVVKLDLGAHVDGYIADTAVTVDLG-----GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGF 143 (291)
T ss_pred CcccCCCCEEEEEEeEEECCEEEEEEEEEEeC-----hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 78999999999999999999999999999998 3778999999999999999999999999999999999999999
Q ss_pred ccccCcccccccc-ccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccccccccCc
Q 016183 178 KIVEGVLSHQLKQ-FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKM 256 (394)
Q Consensus 178 ~~~~~~~GHgiG~-~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~ 256 (394)
.++.+++|||||+ .+|++| .||+... +++.+|++||||+|||++++|.|+++. +.++|||++ +.+|+||+
T Consensus 144 ~~~~~~~GHgiG~~~~he~p-~ip~~~~----~~~~~le~GmV~aIEp~~t~G~G~v~~--~~~~~iy~~--~~~~~~k~ 214 (291)
T PRK08671 144 KPIRNLTGHGLERYELHAGP-SIPNYDE----GGGVKLEEGDVYAIEPFATDGEGKVVE--GPEVEIYSL--LRNRPVRL 214 (291)
T ss_pred cccCCCcccCcCCCcccCCC-ccCccCC----CCCceeCCCCEEEEcceEECCCCeEec--CCceEEEee--cCCCCCCC
Confidence 9999999999998 567776 6665422 357899999999999999999999974 356999998 46999999
Q ss_pred hhHHHHHHHHHhhCCCCcccccc-chhhhh-hhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeecC
Q 016183 257 KASRFIFSEINQKFPIMPFTARA-LEEKRA-RLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITS 331 (394)
Q Consensus 257 ~~~r~~~~~i~~~~~~~pf~~r~-~~~~~~-~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~ 331 (394)
++||++|++|+++|++|||++|| +|++.+ ++||+||++||+|.|||||++++|++||||||||+|+++|++++|.
T Consensus 215 ~~~r~~~~~i~~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 215 PAARKLLEEIEEEYNTLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred HHHHHHHHHHHHHCCCCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 99999999999999999999999 566665 8899999999999999999999999999999999999999999984
No 5
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=8.9e-72 Score=539.13 Aligned_cols=291 Identities=30% Similarity=0.493 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCC
Q 016183 16 PEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLA 95 (394)
Q Consensus 16 ~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~ 95 (394)
-+||++||+|++|++++++.+.+.++||+++.|||+.++..+.+.|+ ..+||+++|.|++++||+|.+
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~------------~~aFp~~vs~n~~~~H~~p~~ 69 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGA------------EPAFPCNISINECAAHFTPKA 69 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCC------------CCCCCcceecCCEeeCCCCCC
Confidence 36899999999999999999999999999999999999999998865 257999999999999999986
Q ss_pred CCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHC
Q 016183 96 SDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAH 175 (394)
Q Consensus 96 ~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~ 175 (394)
++++.|++||+|+||+|++++||++|++||+++|. .++++++++++|++++++++|||++++||+++++++++++
T Consensus 70 ~d~~~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~-----~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~ 144 (295)
T TIGR00501 70 GDKTVFKDGDVVKLDLGAHVDGYIADTAITVDLGD-----QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESY 144 (295)
T ss_pred CcCccCCCCCEEEEEEeEEECCEEEEEEEEEEeCc-----HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHc
Confidence 66789999999999999999999999999999984 3689999999999999999999999999999999999999
Q ss_pred CCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccccccccC
Q 016183 176 DCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLK 255 (394)
Q Consensus 176 G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk 255 (394)
||.++.+++|||+|++.+++...||+... +.+.+|++||||+|||++++|.|+++.. .++|||+++ .+|+||
T Consensus 145 G~~~i~~~~GHgig~~~~h~g~~ip~i~~----~~~~~le~GmV~aIEP~~~~G~G~v~~~--~~~~iy~~~--~~~~~k 216 (295)
T TIGR00501 145 GVKPISNLTGHSMAPYRLHGGKSIPNVKE----RDTTKLEEGDVVAIEPFATDGVGYVTDG--GEVSIYAFL--AERPVR 216 (295)
T ss_pred CCeeecCCCCcceecccccCCCccCeecC----CCCCEeCCCCEEEEceeEECCcCeEecC--CCeEEEeEC--CCCCCC
Confidence 99999999999999755444436655432 2568999999999999999999998653 359999984 349999
Q ss_pred chhHHHHHHHHHhhCCCCccccccc-hh--hhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeecC
Q 016183 256 MKASRFIFSEINQKFPIMPFTARAL-EE--KRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITS 331 (394)
Q Consensus 256 ~~~~r~~~~~i~~~~~~~pf~~r~~-~~--~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~ 331 (394)
|++||++|++|+++|++|||++||+ ++ .+++|||+||++||+|.|||||++++|++||||||||+|+++|++++|.
T Consensus 217 ~~~~r~~l~~i~~~~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 217 LDSARNLLKTIDENYGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred CHHHHHHHHHHHHHCCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 9999999999999999999999994 43 4589999999999999999999999999999999999999999999984
No 6
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.7e-70 Score=529.66 Aligned_cols=287 Identities=30% Similarity=0.525 Sum_probs=264.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCC
Q 016183 19 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDE 98 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~ 98 (394)
+++||+|++|++++++++.+.++||+|+.|||+.+++.+.+.|+ +++||+++|.|++.+||+|+.+++
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~------------~~afp~~is~n~~~~H~~p~~~d~ 68 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGA------------GPAFPVNLSINECAAHYTPNAGDD 68 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCC------------CCCCCceeccCCEeeCCCCCCCCC
Confidence 36899999999999999999999999999999999999988753 577999999999999999986567
Q ss_pred ccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCc
Q 016183 99 TVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCK 178 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~ 178 (394)
+.|++||+|+||+|++++||++|++||+++|+ +++++++++++|++++++++|||++++||+++++++++++||.
T Consensus 69 ~~l~~GDvV~iD~G~~~dGY~sD~arT~~vg~-----~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~ 143 (291)
T cd01088 69 TVLKEGDVVKLDFGAHVDGYIADSAFTVDFDP-----KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFK 143 (291)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEecCh-----hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCE
Confidence 89999999999999999999999999999983 7789999999999999999999999999999999999999999
Q ss_pred cccCcccccccc-ccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccccccccCch
Q 016183 179 IVEGVLSHQLKQ-FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMK 257 (394)
Q Consensus 179 ~~~~~~GHgiG~-~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~ 257 (394)
++.+++|||||+ .+|++| .||+.... .+.+|++||||+|||++++|.|+++. +.++|||+++.+. +||++
T Consensus 144 ~~~~~~GHgig~~~~h~~~-~ip~~~~~----~~~~le~gmV~aIEp~~s~G~G~v~~--~~~~~iy~~~~~~--~~~~~ 214 (291)
T cd01088 144 PIRNLTGHSIERYRLHAGK-SIPNVKGG----EGTRLEEGDVYAIEPFATTGKGYVHD--GPECSIYMLNRDK--PLRLP 214 (291)
T ss_pred EeecCCccCccCccccCCC-ccCccCCC----CCCEeCCCCEEEEceeEECCCCeeec--CCceEEEEEcCCC--CCCCH
Confidence 999999999997 466655 67665432 46899999999999999999999964 5679999987655 89999
Q ss_pred hHHHHHHHHHhhCCCCccccccc-hh--hhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeecC
Q 016183 258 ASRFIFSEINQKFPIMPFTARAL-EE--KRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITS 331 (394)
Q Consensus 258 ~~r~~~~~i~~~~~~~pf~~r~~-~~--~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~ 331 (394)
+||++|++|+++|++|||++||+ ++ ++++|||+||++||+|.|||||++++|++||||||||+|+++|++++|.
T Consensus 215 ~~r~~~~~i~~~~~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 215 RARKLLDVIYENFGTLPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred HHHHHHHHHHHHCCCCCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 99999999999999999999994 55 7999999999999999999999999999999999999999999999984
No 7
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.7e-60 Score=439.58 Aligned_cols=251 Identities=30% Similarity=0.473 Sum_probs=227.9
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccC
Q 016183 11 LDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCH 90 (394)
Q Consensus 11 ~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H 90 (394)
+.+|+++||++||+||+|++++++.+.+.++||+|..||+..++++++++++.+ .. .+++|++||+|+|+|+++||
T Consensus 3 i~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~p--a~--~gy~g~~~~~ciSvNe~v~H 78 (255)
T COG0024 3 ISIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYP--AF--LGYKGFPFPTCISVNEVVAH 78 (255)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCcee--hh--ccCcCCCcceEeehhheeee
Confidence 358999999999999999999999999999999999999999999999977743 22 26788999999999999999
Q ss_pred CCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHH
Q 016183 91 FSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQK 170 (394)
Q Consensus 91 ~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~ 170 (394)
|+|. ++++|++||+|+||+|+++|||++|.++||.||+. +++...+|++++++|++++|+.+|||++.++|.++|++
T Consensus 79 giP~--d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~-~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~ 155 (255)
T COG0024 79 GIPG--DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEV-SDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQE 155 (255)
T ss_pred cCCC--CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCC-ChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 9998 67999999999999999999999999999999951 33577789999999999999999999999999999999
Q ss_pred HHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEeccccc
Q 016183 171 VAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDK 250 (394)
Q Consensus 171 ~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~ 250 (394)
+++++||+++++|+|||+|+.+|++| .|+++.+ ++...+|++||||+||||+++|.+.+....+.+||+.
T Consensus 156 ~~~~~G~~vVr~~~GHgig~~~He~p-~ip~y~~---~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~------ 225 (255)
T COG0024 156 YAESRGFSVVRNLTGHGIGRELHEEP-SIPNYGK---DGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLV------ 225 (255)
T ss_pred HHHHcCCEEeecccCCccCcccCCCC-eeccccC---CCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEE------
Confidence 99999999999999999999999999 6766543 3345899999999999999999999987773448865
Q ss_pred ccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeec
Q 016183 251 NYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRIT 330 (394)
Q Consensus 251 ~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT 330 (394)
++||+++|||||||+||++|+++||
T Consensus 226 -------------------------------------------------------t~d~~~~aq~EHTv~Vt~~g~eilT 250 (255)
T COG0024 226 -------------------------------------------------------TKDGSLSAQFEHTVIVTEDGCEILT 250 (255)
T ss_pred -------------------------------------------------------eCCCCEEeEEEEEEEEeCCCcEEee
Confidence 7899999999999999999999999
Q ss_pred CCC
Q 016183 331 SHT 333 (394)
Q Consensus 331 ~~~ 333 (394)
..+
T Consensus 251 ~~~ 253 (255)
T COG0024 251 LRP 253 (255)
T ss_pred CCC
Confidence 765
No 8
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-52 Score=381.31 Aligned_cols=248 Identities=19% Similarity=0.336 Sum_probs=226.0
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCccc
Q 016183 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLC 89 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~ 89 (394)
..-|.++++|++||.|++++.++|+.+..+++||+|+.||+..+++++.+.|+ |++.. ++.+++-.+|.|+|+++|
T Consensus 113 ~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~--YPSPL--nYy~FPKS~CTSVNEviC 188 (369)
T KOG2738|consen 113 EIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGA--YPSPL--NYYGFPKSVCTSVNEVIC 188 (369)
T ss_pred ceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCC--cCCCc--ccCCCchhhhcchhheee
Confidence 46788999999999999999999999999999999999999999999999987 55542 454533349999999999
Q ss_pred CCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHH
Q 016183 90 HFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQ 169 (394)
Q Consensus 90 H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~ 169 (394)
|++|. .|+|++||+|.||+.+.++||++|..+||+||+ ++++.+++.+.++++++.||+.+|||+++.+|++.|+
T Consensus 189 HGIPD---~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~--Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~ 263 (369)
T KOG2738|consen 189 HGIPD---SRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGN--VDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQ 263 (369)
T ss_pred cCCCC---cCcCCCCCEEeEEEEEEeccccCccccceEeec--cCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 99995 799999999999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred HHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccc
Q 016183 170 KVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVD 249 (394)
Q Consensus 170 ~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~ 249 (394)
+.+.++||++++.++|||||..+|-.| .|+.+.+. ....++.+||+|+||||++.|.......+|. ||..
T Consensus 264 kha~~~g~sVVr~ycGHGig~~FH~~P-nipHya~n---~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~-WT~v----- 333 (369)
T KOG2738|consen 264 KHATKNGYSVVRSYCGHGIGRVFHCAP-NIPHYAKN---KAPGVMKPGQTFTIEPMITIGTWEDITWPDD-WTAV----- 333 (369)
T ss_pred HHhhhcCceeehhhhccccccccccCC-Cchhhccc---CCcceeecCceEEeeeeecccccccccCCCC-ceEE-----
Confidence 999999999999999999999999999 66655442 2557999999999999999998888788887 6654
Q ss_pred cccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceee
Q 016183 250 KNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRI 329 (394)
Q Consensus 250 ~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~l 329 (394)
+.||.++||||||+|||+.|+|||
T Consensus 334 --------------------------------------------------------TaDG~~sAQFEhTlLVT~tG~EIL 357 (369)
T KOG2738|consen 334 --------------------------------------------------------TADGKRSAQFEHTLLVTETGCEIL 357 (369)
T ss_pred --------------------------------------------------------ecCCceecceeeEEEEecccceeh
Confidence 579999999999999999999999
Q ss_pred cCC
Q 016183 330 TSH 332 (394)
Q Consensus 330 T~~ 332 (394)
|..
T Consensus 358 T~r 360 (369)
T KOG2738|consen 358 TKR 360 (369)
T ss_pred hcc
Confidence 975
No 9
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=4.1e-50 Score=399.50 Aligned_cols=248 Identities=19% Similarity=0.326 Sum_probs=219.9
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCC
Q 016183 9 KELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNN 86 (394)
Q Consensus 9 ~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~ 86 (394)
+.|.|||++||+.||+|++|+.++++.+.+.++||+|+.||++.++.++.++|+.. ... + ..+|| +|+|+|+
T Consensus 133 ~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~p--s~l--~--y~~fp~svcts~N~ 206 (396)
T PLN03158 133 HSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYP--SPL--N--YHFFPKSCCTSVNE 206 (396)
T ss_pred cceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcc--ccc--c--ccCCCceeeecccc
Confidence 46899999999999999999999999999999999999999999999998887632 110 1 23466 6779999
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016183 87 TLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
.+||+.|. +++|++||+|+||+|+.++||++|++|||+||+ ++++++++++++++|++++++++|||++++||++
T Consensus 207 ~i~Hgip~---~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~--~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~ 281 (396)
T PLN03158 207 VICHGIPD---ARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGN--VDEASRQLVKCTYECLEKAIAIVKPGVRYREVGE 281 (396)
T ss_pred cccCCCCC---CccCCCCCEEEEEEeEEECCEEEeEEeEEEcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence 99999997 789999999999999999999999999999997 8999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEec
Q 016183 167 AIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKR 246 (394)
Q Consensus 167 ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~ 246 (394)
++++++.++||.++++++|||||+.+|+.| .|+++.+ .....+|++||||+|||+++.|.......+|+ ||+.
T Consensus 282 ~i~~~~~~~G~~~v~~~~GHGIG~~~He~P-~i~~~~~---~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~-wt~~-- 354 (396)
T PLN03158 282 VINRHATMSGLSVVKSYCGHGIGELFHCAP-NIPHYAR---NKAVGVMKAGQVFTIEPMINAGVWRDRMWPDG-WTAV-- 354 (396)
T ss_pred HHHHHHHHcCCCccCCccCCccccccCCCC-CCCcccC---CCCCCEecCCcEEEECCeeccCcccceecCCC-ceEE--
Confidence 999999999999999999999999999998 5544322 12346999999999999999887776666776 6654
Q ss_pred ccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCc
Q 016183 247 AVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGS 326 (394)
Q Consensus 247 ~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~ 326 (394)
+.+|..+||||||||||++|+
T Consensus 355 -----------------------------------------------------------t~dG~~~aq~E~tvlVTe~G~ 375 (396)
T PLN03158 355 -----------------------------------------------------------TADGKRSAQFEHTLLVTETGV 375 (396)
T ss_pred -----------------------------------------------------------ecCCceeeEeeeEEEEeCCcc
Confidence 468999999999999999999
Q ss_pred eeecCCC
Q 016183 327 DRITSHT 333 (394)
Q Consensus 327 ~~lT~~~ 333 (394)
++||...
T Consensus 376 EiLT~~~ 382 (396)
T PLN03158 376 EVLTARL 382 (396)
T ss_pred eECCCCC
Confidence 9999743
No 10
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.6e-49 Score=373.37 Aligned_cols=247 Identities=17% Similarity=0.279 Sum_probs=215.5
Q ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccC
Q 016183 11 LDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCH 90 (394)
Q Consensus 11 ~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H 90 (394)
..|||++||++||+|++|++++++.+.+.++||+||.||++.++..+.++|+.... .++.++++++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~----~~~~~~~~~i~~g~n~~~~H 77 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQ----KGYNGYPYAICASVNDEMCH 77 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccc----cccCCCCcceEeccCCEeec
Confidence 57999999999999999999999999999999999999999999999998875311 12335555567799999999
Q ss_pred CCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHH
Q 016183 91 FSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQK 170 (394)
Q Consensus 91 ~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~ 170 (394)
+.|+ +++|++||+|++|+|++|+||++|++|||++|+ ++++++++|+++++|+++++++++||++++||++++++
T Consensus 78 ~~p~---~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~--~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~ 152 (248)
T PRK12897 78 AFPA---DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGK--VSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIES 152 (248)
T ss_pred CCCC---CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHH
Confidence 9997 789999999999999999999999999999997 89999999999999999999999999999999999999
Q ss_pred HHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEeccccc
Q 016183 171 VAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDK 250 (394)
Q Consensus 171 ~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~ 250 (394)
+++++||....+++|||||+.+||.| .++.. ..++++.+|++||||+|||+++.|........++ |++-
T Consensus 153 ~~~~~g~~~~~~~~GHgiGl~~hE~P-~i~~~---~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~-~~~~------ 221 (248)
T PRK12897 153 YVANEGFSVARDFTGHGIGKEIHEEP-AIFHF---GKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNG-WTAR------ 221 (248)
T ss_pred HHHHcCCccCCCeEECccCCcccCCC-ccCCC---CCCCCCCCcCCCCEEEECCeEecCCCceEECCCC-cEEE------
Confidence 99999999889999999999999999 44321 1223567899999999999999876665444444 4432
Q ss_pred ccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeec
Q 016183 251 NYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRIT 330 (394)
Q Consensus 251 ~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT 330 (394)
+.+|...+||||||+||++|+++||
T Consensus 222 -------------------------------------------------------~~~g~~g~r~edtv~Vt~~G~e~lt 246 (248)
T PRK12897 222 -------------------------------------------------------TMDGKLSAQYEHTIAITKDGPIILT 246 (248)
T ss_pred -------------------------------------------------------cCCCCeEeecceEEEEeCCccEEee
Confidence 4578899999999999999999999
Q ss_pred CC
Q 016183 331 SH 332 (394)
Q Consensus 331 ~~ 332 (394)
.+
T Consensus 247 ~~ 248 (248)
T PRK12897 247 KL 248 (248)
T ss_pred cC
Confidence 63
No 11
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.6e-48 Score=374.37 Aligned_cols=249 Identities=16% Similarity=0.197 Sum_probs=218.1
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhcccc--Ccccc--eeecC
Q 016183 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIER--GVAFP--SCVSV 84 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~--g~afp--~~vs~ 84 (394)
|+.|||++||++||+|++|+.+++..+.+.++||+|+.||++.++..+.+.|+.. +. +.. +.+|| +|.|.
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~-----G~~~~~~~f~~~v~~G~ 75 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQI-----GVDGAMMDYPYATCCGL 75 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCccccc-----CCCCcccCCCcceEEec
Confidence 4679999999999999999999999999999999999999999999999887643 21 222 25677 56699
Q ss_pred CCcccCCCCCCCCCccccCCCEEEEEeee---------------------------EECceEEeEEEEEEeCCCCCCHHH
Q 016183 85 NNTLCHFSPLASDETVLQEGDMIKIDLGC---------------------------HIDGFIAVVAHTHVLQDGPVTGRA 137 (394)
Q Consensus 85 n~~~~H~~P~~~~~~~L~~GDvV~iDlG~---------------------------~~dGY~ad~aRT~~vG~~~~s~~~ 137 (394)
|..++|+.|+ ++.|++||+|+||+|+ .|+||++|++|||++|+ +++++
T Consensus 76 n~~~~H~~p~---~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~--~~~~~ 150 (286)
T PRK07281 76 NDEVAHAFPR---HYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGT--PSDEV 150 (286)
T ss_pred cccccCCCCC---CcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCC--CCHHH
Confidence 9999999997 7899999999999998 48999999999999997 88999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCC
Q 016183 138 ADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEEN 217 (394)
Q Consensus 138 ~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~G 217 (394)
+++|+++++|++++++.+|||++++||+++++++++++||..+.+++|||||+.+||.| .+++ ...++.+.+|++|
T Consensus 151 ~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P-~i~~---~~~~~~~~~Le~G 226 (286)
T PRK07281 151 KNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEP-MVPN---YGTAGRGLRLREG 226 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCC-cCCC---cccCCCCCEECCC
Confidence 99999999999999999999999999999999999999999888999999999999998 4533 2233467899999
Q ss_pred cEEEEceeeecCCCCCccc-CCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCC
Q 016183 218 EVYAVDIVTSTGDGKPKLL-DEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHE 296 (394)
Q Consensus 218 mV~aIEp~is~g~g~~~~~-~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ 296 (394)
|||+|||+++.|.+.+... +|+ ||++
T Consensus 227 MV~tiEPgiy~~~~~~~~~~~~g-w~~~---------------------------------------------------- 253 (286)
T PRK07281 227 MVLTIEPMINTGTWEIDTDMKTG-WAHK---------------------------------------------------- 253 (286)
T ss_pred CEEEECCeeEcCCcceecccCCC-ceEE----------------------------------------------------
Confidence 9999999999876665433 455 7776
Q ss_pred CccccCeeeecCCceeEEEEEEEEEcCCCceeecCCCC
Q 016183 297 LLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTL 334 (394)
Q Consensus 297 ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~~~~ 334 (394)
+.+|.+.+||||||+||++|+++||..+.
T Consensus 254 ---------~~~g~~gvr~EdtvlVT~~G~e~LT~~~~ 282 (286)
T PRK07281 254 ---------TLDGGLSCQYEHQFVITKDGPVILTSQGE 282 (286)
T ss_pred ---------ecCCCcEEEeccEEEEeCCcceECCCCCc
Confidence 46899999999999999999999998653
No 12
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=4e-48 Score=367.37 Aligned_cols=249 Identities=20% Similarity=0.347 Sum_probs=221.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n 85 (394)
-|.+.|||++||++||+|++|++++++.+.+.++||+|+.||+..++..+.+.|+..+.. ....|| +|.|.|
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~------~~~~~~~~~~~~~n 78 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPE------GYYGFPGSTCISVN 78 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcc------cCCCCCcceEecCC
Confidence 456789999999999999999999999999999999999999999999999888753211 123466 667899
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
+.++|+.|+ +++|++||+|++|+|+.|+||++|++|||++|+ ++++++++|++++++++++++++|||+++++|+
T Consensus 79 ~~~~h~~p~---~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~--~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~ 153 (255)
T PRK12896 79 EEVAHGIPG---PRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGP--VSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIG 153 (255)
T ss_pred CeeEecCCC---CccCCCCCEEEEEEeEEECcEEEeeEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 999999997 689999999999999999999999999999997 789999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEe
Q 016183 166 EAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYK 245 (394)
Q Consensus 166 ~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~ 245 (394)
++++++++++|+....+++|||+|+.+||.|..+.+.. .++.+.+|++||||+|||+++.|..+++..+++ |++.
T Consensus 154 ~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p~~~~~~~---~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~-~~~~- 228 (255)
T PRK12896 154 RAIEDFAKKNGYSVVRDLTGHGVGRSLHEEPSVILTYT---DPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDG-WTVV- 228 (255)
T ss_pred HHHHHHHHHcCCEeccCcccCCcCcccccCCCccccCC---CCCCCCEecCCcEEEEeceEEcCCCceEEcCCC-CEEE-
Confidence 99999999999988889999999999999995443221 223578999999999999999999988877776 8876
Q ss_pred cccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCC
Q 016183 246 RAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNG 325 (394)
Q Consensus 246 ~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G 325 (394)
+++|.+.+||||||+||++|
T Consensus 229 ------------------------------------------------------------~~~~~~~~~~edtv~vt~~G 248 (255)
T PRK12896 229 ------------------------------------------------------------TPDKSLSAQFEHTVVVTRDG 248 (255)
T ss_pred ------------------------------------------------------------ecCCCeEEEEEEEEEEcCCc
Confidence 46789999999999999999
Q ss_pred ceeecCC
Q 016183 326 SDRITSH 332 (394)
Q Consensus 326 ~~~lT~~ 332 (394)
+++||.+
T Consensus 249 ~e~Lt~~ 255 (255)
T PRK12896 249 PEILTDR 255 (255)
T ss_pred ceecCCC
Confidence 9999963
No 13
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=6.1e-48 Score=372.13 Aligned_cols=246 Identities=19% Similarity=0.295 Sum_probs=211.8
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCCccc
Q 016183 12 DLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNNTLC 89 (394)
Q Consensus 12 ~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~~~~ 89 (394)
.|||++||++||+|++|++++++++++.++||+||.||++.++.++.+.|+..... .+.+.+|| +|.|.|+.++
T Consensus 42 ~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~----~~~~~~f~~~v~~g~n~~~~ 117 (291)
T PRK12318 42 IIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPL----NYGSPPFPKTICTSLNEVIC 117 (291)
T ss_pred EECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcccc----ccCCCCCCcceEeeccceee
Confidence 59999999999999999999999999999999999999998888887776532111 12245677 5568999999
Q ss_pred CCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHH
Q 016183 90 HFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQ 169 (394)
Q Consensus 90 H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~ 169 (394)
|+.|+ +++|++||+|++|+|+.|+||++|++|||++|+ ++++++++|+++.++++++++.+|||++++||+++++
T Consensus 118 H~~p~---~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~--~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~ 192 (291)
T PRK12318 118 HGIPN---DIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGE--VSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIE 192 (291)
T ss_pred cCCCC---CCccCCCCEEEEEEeEEECcEEEEEEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 99997 789999999999999999999999999999997 8999999999999999999999999999999999999
Q ss_pred HHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecC-CCCCcccCCCceEEEeccc
Q 016183 170 KVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTG-DGKPKLLDEKQTTIYKRAV 248 (394)
Q Consensus 170 ~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g-~g~~~~~~~~~~tv~~~~~ 248 (394)
++++++|+....+++|||||+.+||.| .|+...+ +.+.+|++||||+|||+++.+ .+.+....+ .|++-
T Consensus 193 ~~~~~~G~~~~~~~~GHgIGl~~hE~P-~i~~~~~----~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~-~~~~~---- 262 (291)
T PRK12318 193 NCADKYGFSVVDQFVGHGVGIKFHENP-YVPHHRN----SSKIPLAPGMIFTIEPMINVGKKEGVIDPIN-HWEAR---- 262 (291)
T ss_pred HHHHHcCCccCCCcccCCcCccccCCC-cccCcCC----CCCCEeCCCCEEEECCEEEcCCCceEEecCC-CcEEE----
Confidence 999999998878899999999999999 5543221 245789999999999999865 333322223 36654
Q ss_pred ccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCcee
Q 016183 249 DKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDR 328 (394)
Q Consensus 249 ~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~ 328 (394)
.+||..++||||||+||++|+++
T Consensus 263 ---------------------------------------------------------~~~g~~~~~~edtv~VTe~G~e~ 285 (291)
T PRK12318 263 ---------------------------------------------------------TCDNQPSAQWEHTILITETGYEI 285 (291)
T ss_pred ---------------------------------------------------------ecCCCeeeeeeeEEEEcCCccee
Confidence 46899999999999999999999
Q ss_pred ecCCC
Q 016183 329 ITSHT 333 (394)
Q Consensus 329 lT~~~ 333 (394)
||..|
T Consensus 286 LT~~~ 290 (291)
T PRK12318 286 LTLLD 290 (291)
T ss_pred CCCCC
Confidence 99876
No 14
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=1.8e-47 Score=361.43 Aligned_cols=243 Identities=24% Similarity=0.397 Sum_probs=215.4
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCCccc
Q 016183 12 DLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNNTLC 89 (394)
Q Consensus 12 ~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~~~~ 89 (394)
+|||++||++||+|++|++++++.+.+.++||+||.||++.++..+.+.|+..+.. + ..+|| ++.|.|+.++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~----~--~~~~~~~~~~~~n~~~~ 75 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFL----G--YYGFPGSVCISVNEVVI 75 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCcccc----C--CCCCCceeEeccccEEE
Confidence 69999999999999999999999999999999999999999999999988754221 1 23566 4568999999
Q ss_pred CCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHH
Q 016183 90 HFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQ 169 (394)
Q Consensus 90 H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~ 169 (394)
||.|+ ++.|++||+|++|+|+.|+||++|++|||++|+ ++++++++|++++++++++++.+|||++++||+++++
T Consensus 76 H~~~~---~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~--~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~ 150 (247)
T TIGR00500 76 HGIPD---KKVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGK--ISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQ 150 (247)
T ss_pred ecCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 99997 789999999999999999999999999999996 8899999999999999999999999999999999999
Q ss_pred HHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccc
Q 016183 170 KVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVD 249 (394)
Q Consensus 170 ~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~ 249 (394)
++++++|+....+++|||||+.+||.| .++++. .++++.+|++||||+|||+++.+.+.+...+++ |++.
T Consensus 151 ~~~~~~g~~~~~~~~GHgiG~~~~e~p-~i~~~~---~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~-~~~~----- 220 (247)
T TIGR00500 151 KYAEAKGFSVVREYCGHGIGRKFHEEP-QIPNYG---KKFTNVRLKEGMVFTIEPMVNTGTEEITTAADG-WTVK----- 220 (247)
T ss_pred HHHHHcCCEeccCccCCccCcccCCCC-ccCCcC---cCCCCCEecCCCEEEEeeEEEcCCCcEEECCCC-CEEE-----
Confidence 999999998888899999999999999 554332 234578999999999999999888777654444 6655
Q ss_pred cccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceee
Q 016183 250 KNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRI 329 (394)
Q Consensus 250 ~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~l 329 (394)
.++|.+.+|+|+||+||++|+++|
T Consensus 221 --------------------------------------------------------~~~~~~g~ried~v~Vt~~G~e~L 244 (247)
T TIGR00500 221 --------------------------------------------------------TKDGSLSAQFEHTIVITDNGPEIL 244 (247)
T ss_pred --------------------------------------------------------ccCCCeEEEEeEEEEEcCCccEEc
Confidence 357889999999999999999999
Q ss_pred cC
Q 016183 330 TS 331 (394)
Q Consensus 330 T~ 331 (394)
|.
T Consensus 245 t~ 246 (247)
T TIGR00500 245 TE 246 (247)
T ss_pred cC
Confidence 96
No 15
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=100.00 E-value=1.6e-47 Score=353.05 Aligned_cols=310 Identities=29% Similarity=0.494 Sum_probs=277.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCC
Q 016183 6 REEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVN 85 (394)
Q Consensus 6 ~~~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n 85 (394)
++.++...-..+...-+|+|+++..++.+.+.+.++|||+..|||..++...+....+ ++...|++||+-.|.|
T Consensus 72 eekr~ler~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e------~gl~aGi~FPtG~SlN 145 (397)
T KOG2775|consen 72 EEKRELERTESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILE------NGLNAGIGFPTGCSLN 145 (397)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHh------ccccccccCCCccccc
Confidence 3444455566778889999999999999999999999999999999987755533211 1234699999999999
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
+|..||+|+..|..+|+.+|+.+||+|.|++|-+.|++.|+.+. +....++.|+++|...+|+...-.++.+||.
T Consensus 146 ~cAAHyTpNaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F~-----p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG 220 (397)
T KOG2775|consen 146 HCAAHYTPNAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAFN-----PKYDPLLAAVREATNTGIKEAGIDVRLCDIG 220 (397)
T ss_pred chhhhcCCCCCCceeeeecceEEEeccccccCeEeeeeeEEeeC-----ccccHHHHHHHHHHhhhhhhcCceeeehhhh
Confidence 99999999988889999999999999999999999999999996 4567799999999999999999999999999
Q ss_pred HHHHHHHHHCCC---------ccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCccc
Q 016183 166 EAIQKVAAAHDC---------KIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLL 236 (394)
Q Consensus 166 ~ai~~~~~~~G~---------~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~ 236 (394)
++|++++++|.+ .+++++.||+|+++.+++.+.+|...+- +...+++|++|+||.+-|+|.|.+ .
T Consensus 221 ~aiqEVmeSyEvEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgg----e~trmee~e~yAIETFgSTGkG~v--~ 294 (397)
T KOG2775|consen 221 EAIQEVMESYEVEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGG----EQTRMEEGEIYAIETFGSTGKGYV--H 294 (397)
T ss_pred HHHHHHhhheEEEeCCceecceeccccCCCcccceEeecCcccceecCC----cceeecCCeeEEEEeeccCCccee--c
Confidence 999999999853 4678999999999999988899887653 678999999999999999999998 5
Q ss_pred CCCceEEEecccc-cccccCchhHHHHHHHHHhhCCCCcccccc---chhhhhhhHHHHHHHCCCccccCeeeecCCcee
Q 016183 237 DEKQTTIYKRAVD-KNYHLKMKASRFIFSEINQKFPIMPFTARA---LEEKRARLGLVECVNHELLQPYPVLHEKPGDYV 312 (394)
Q Consensus 237 ~~~~~tv~~~~~~-~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~---~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~ 312 (394)
+|.+++.|.++++ ....|++..++.||+-|+++|++|||+.|| +.+.++.|.|..++.+|+++|||+|...+|+++
T Consensus 295 ddmecSHymkn~~~~~vplrl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~yt 374 (397)
T KOG2775|consen 295 DDMECSHYMKNFELGHVPLRLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYT 374 (397)
T ss_pred CCcccchhhhhccccccccccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCccee
Confidence 7788999999987 467889999999999999999999999999 477899999999999999999999999999999
Q ss_pred EEEEEEEEEcCCCceeecCC
Q 016183 313 AHIKFTVLLMPNGSDRITSH 332 (394)
Q Consensus 313 aq~e~Tvlvt~~G~~~lT~~ 332 (394)
||||||||+.+.+.+|++..
T Consensus 375 AQfEHTIll~pt~KEVvsrG 394 (397)
T KOG2775|consen 375 AQFEHTILLSPTGKEVVSRG 394 (397)
T ss_pred eeeceeeEecchhcchhccc
Confidence 99999999999999999864
No 16
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2e-46 Score=355.05 Aligned_cols=248 Identities=24% Similarity=0.377 Sum_probs=217.6
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCCc
Q 016183 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNNT 87 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~~ 87 (394)
+..|||++||+.||+|++|++++++.+.+.++||+|+.||++.++..+.+.|...... + ..+|| ++.|.|+.
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~----~--~~~~~~~~~~g~~~~ 75 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPL----G--YHGFPKSICTSVNEV 75 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEeccc----C--CCCCCcCeEecccce
Confidence 4579999999999999999999999999999999999999999999998887643211 1 12354 55689999
Q ss_pred ccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHH
Q 016183 88 LCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEA 167 (394)
Q Consensus 88 ~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~a 167 (394)
++|+.|+ ++.|++||+|++|+|+.|+||++|++||+++|+ +++++++++++++++++++++++|||++++||+++
T Consensus 76 ~~h~~~~---~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~--~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~ 150 (252)
T PRK05716 76 VCHGIPS---DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGE--ISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHA 150 (252)
T ss_pred eecCCCC---CcccCCCCEEEEEEEEEECCEEEEeEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999987 789999999999999999999999999999997 88999999999999999999999999999999999
Q ss_pred HHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecc
Q 016183 168 IQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRA 247 (394)
Q Consensus 168 i~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~ 247 (394)
++++++++|+....+++|||||+.+||.| .+++ +..++++.+|++||||+|||+++.+.+.++..+++ |.+.
T Consensus 151 ~~~~~~~~g~~~~~~~~GHgiG~~~~e~p-~~~~---~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~-~~~~--- 222 (252)
T PRK05716 151 IQKYAEAEGFSVVREYCGHGIGRKFHEEP-QIPH---YGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDG-WTVV--- 222 (252)
T ss_pred HHHHHHHcCCeeecCccccccCCccCCCC-ccCc---CCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCC-CEEE---
Confidence 99999999998888899999999999998 4433 22345678999999999999999888887665555 5554
Q ss_pred cccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCce
Q 016183 248 VDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSD 327 (394)
Q Consensus 248 ~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~ 327 (394)
.++|...+++|+||+||++|++
T Consensus 223 ----------------------------------------------------------~~~g~~g~~~ed~v~Vt~~G~e 244 (252)
T PRK05716 223 ----------------------------------------------------------TKDGSLSAQYEHTVAVTEDGPE 244 (252)
T ss_pred ----------------------------------------------------------ccCCCcEEeeeeEEEEcCCccE
Confidence 3578889999999999999999
Q ss_pred eecCCCC
Q 016183 328 RITSHTL 334 (394)
Q Consensus 328 ~lT~~~~ 334 (394)
+||..|.
T Consensus 245 ~Lt~~~~ 251 (252)
T PRK05716 245 ILTLRPE 251 (252)
T ss_pred EeeCCCC
Confidence 9998774
No 17
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=4e-42 Score=322.97 Aligned_cols=238 Identities=23% Similarity=0.371 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCC
Q 016183 19 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDE 98 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~ 98 (394)
|++||+|++|++++++.+.+.++||+|+.||+..+...+.+.|...+.. ...+++..++.|.|+..+|+.|+ +
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~h~~~~---~ 73 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPL----GYYGFPKSICTSVNEVVCHGIPD---D 73 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccc----cCCCCCcceecCCCCceeCCCCC---C
Confidence 5799999999999999999999999999999999999999888754221 11232233566899999999987 7
Q ss_pred ccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCc
Q 016183 99 TVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCK 178 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~ 178 (394)
++|++||+|++|+|+.++||++|++|||++|+ ++++++++|+++.++++++++++|||++++||++++++++++.|+.
T Consensus 74 ~~l~~Gd~v~id~g~~~~GY~ad~~RT~~~G~--~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~ 151 (238)
T cd01086 74 RVLKDGDIVNIDVGVELDGYHGDSARTFIVGE--VSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYS 151 (238)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcc
Confidence 99999999999999999999999999999997 7899999999999999999999999999999999999999999998
Q ss_pred cccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccccccccCchh
Q 016183 179 IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKA 258 (394)
Q Consensus 179 ~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~ 258 (394)
...+++|||+|+.+||.|. ++. +..++.+.+|++||||+|||+++.+.+.++...++ |.+.
T Consensus 152 ~~~~~~GHgiG~~~~e~p~-~~~---~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~-~~~~-------------- 212 (238)
T cd01086 152 VVREFGGHGIGRKFHEEPQ-IPN---YGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDG-WTVV-------------- 212 (238)
T ss_pred eecCccccCCCCccccCCC-cCC---ccCCCCCCEecCCCEEEEeeEEECCCCceEECCCC-CEEE--------------
Confidence 8788999999999999984 321 22334678999999999999999877666543333 3322
Q ss_pred HHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeecC
Q 016183 259 SRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITS 331 (394)
Q Consensus 259 ~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~ 331 (394)
.++|...+++|+||+||++|+++||.
T Consensus 213 -----------------------------------------------~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 213 -----------------------------------------------TKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred -----------------------------------------------cCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 45788899999999999999999984
No 18
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=2e-42 Score=344.33 Aligned_cols=198 Identities=17% Similarity=0.256 Sum_probs=176.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
++.|+|||++||++||+|++|+++++..+.+.++||+||.||++.++..+.+.|+ .+.+|++++ +.|
T Consensus 122 ~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~-----------~~~~f~~iv~sG~~ 190 (361)
T PRK09795 122 DVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGA-----------EKASFDTIVASGWR 190 (361)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCC-----------CcCCCCeEEEEecc
Confidence 6789999999999999999999999999999999999999999999999888765 356787665 689
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCH---HHHHHHHHHHHHHHHHHHHcCCCCChh
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTG---RAADVIAAANTAAEVALRLVRPGKKNK 162 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~---~~~~l~~a~~~a~~a~i~~lkPG~~~~ 162 (394)
...+|+.|+ +++|++||+|.+|+|+.|+||++|++|||++|..+++. +++++|+++.+|++++++++|||++++
T Consensus 191 ~~~ph~~~~---~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~ 267 (361)
T PRK09795 191 GALPHGKAS---DKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQ 267 (361)
T ss_pred ccccCCCCC---CceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 999999987 78999999999999999999999999999997321233 378999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCcc-ccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 163 DVTEAIQKVAAAHDCKI-VEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 163 dV~~ai~~~~~~~G~~~-~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
||++++++++++.||.. ..+.+|||||+.+||.| .+ .+ +.+.+|++||||+|||+++
T Consensus 268 ~v~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p-~i--~~-----~~~~~l~~gmv~~iEpgiy 325 (361)
T PRK09795 268 QVDDAARRVITEAGYGDYFGHNTGHAIGIEVHEDP-RF--SP-----RDTTTLQPGMLLTVEPGIY 325 (361)
T ss_pred HHHHHHHHHHHHcCCCccCCCCCCccCCccccCCC-Cc--CC-----CCCCCcCCCCEEEECCEEE
Confidence 99999999999999974 46789999999999998 33 12 2568999999999999886
No 19
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=1.1e-41 Score=318.46 Aligned_cols=222 Identities=55% Similarity=0.873 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCC-CC
Q 016183 19 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLA-SD 97 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~-~~ 97 (394)
+++||+|++|++++++.+.+.++||+|+.||+..++.++.+.....|.... .+..+++||+|++.|+.++||+|.+ ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~-~g~~g~~~~~~v~~n~~~~H~~p~~~~~ 79 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEK-KLEKGIAFPTCISVNNCVCHFSPLKSDA 79 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcc-cccCCCCcCeEeccCceeecCCCCCCCC
Confidence 468999999999999999999999999999999999999988766665311 2567899999999999999999864 25
Q ss_pred CccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCC-----HHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHH
Q 016183 98 ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVT-----GRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVA 172 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s-----~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~ 172 (394)
+++|++||+|+||+|++|+||++|++|||++|+ ++ +++++++++++++++++++++|||++++||++++++++
T Consensus 80 ~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~--~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~ 157 (228)
T cd01089 80 TYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGA--EAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVI 157 (228)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEEEEEEEeCC--cCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 688999999999999999999999999999996 44 48999999999999999999999999999999999999
Q ss_pred HHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEeccccccc
Q 016183 173 AAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNY 252 (394)
Q Consensus 173 ~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y 252 (394)
+++||.++.+++||++|+.+.-+|... . -...|++||||++||++.
T Consensus 158 ~~~G~~~~~~~~~h~~g~~~~~~~~~~-----~----~~~~l~~gmvf~~ep~~~------------------------- 203 (228)
T cd01089 158 VDYGCTPVEGVLSHQLKRVVSSGEGKA-----K----LVECVKHGLLFPYPVLYE------------------------- 203 (228)
T ss_pred HHcCCEEecCccccCcCceEecCCCCc-----c----chhhccCCcccccceeEc-------------------------
Confidence 999999999999999999654433110 0 246799999999999763
Q ss_pred ccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeecC
Q 016183 253 HLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITS 331 (394)
Q Consensus 253 ~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~ 331 (394)
.+|..++||++||+||++|+++||+
T Consensus 204 ------------------------------------------------------~~g~~~~~~~~Tv~vt~~G~e~lt~ 228 (228)
T cd01089 204 ------------------------------------------------------KEGEVVAQFKLTVLLTPNGVTVLTG 228 (228)
T ss_pred ------------------------------------------------------cCCCeEEEEEEEEEEcCCCCeeCCC
Confidence 4677889999999999999999995
No 20
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=5.7e-41 Score=328.54 Aligned_cols=196 Identities=20% Similarity=0.228 Sum_probs=170.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcc-cceeecCCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVA-FPSCVSVNN 86 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~a-fp~~vs~n~ 86 (394)
++.|.|||++||+.||+|++|++.++..+.+.++||+||.||.+.+...+.+.+.. +++ |+++.+..+
T Consensus 90 ~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~-----------~~~~~~~i~~G~~ 158 (323)
T PRK15173 90 NELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSET-----------HFSRFHLISVGAD 158 (323)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCC-----------CCCCCcEEEECCC
Confidence 67999999999999999999999999999999999999999999987777665331 222 343333344
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016183 87 TLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
..+|+.|+ ++.|++||+|++|+|+.|+||++|++|||++|+ ++++++++|++++++++++++++|||+++++|++
T Consensus 159 ~~~h~~~~---~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~--p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~ 233 (323)
T PRK15173 159 FSPKLIPS---NTKACSGDLIKFDCGVDVDGYGADIARTFVVGE--PPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFD 233 (323)
T ss_pred CccCCCCC---CCccCCCCEEEEEeCccCCCEeeeeEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 66898886 789999999999999999999999999999997 8899999999999999999999999999999999
Q ss_pred HHHHHHHHCCCc-cccCcccccccc--ccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 167 AIQKVAAAHDCK-IVEGVLSHQLKQ--FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 167 ai~~~~~~~G~~-~~~~~~GHgiG~--~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
+++++++++|+. ...+++|||+|+ .+||.| .+. + +.+.+|++||||+|||+++
T Consensus 234 a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P-~i~--~-----~~~~~Le~GMV~tiEPgiy 289 (323)
T PRK15173 234 STMEVIKKSGLPNYNRGHLGHGNGVFLGLEESP-FVS--T-----HATESFTSGMVLSLETPYY 289 (323)
T ss_pred HHHHHHHHcCCccccCCCCCCcCCCCCCcCCCC-CCC--C-----CCCCccCCCCEEEECCEEE
Confidence 999999999986 456789999997 678888 331 1 2457999999999999875
No 21
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=1.4e-40 Score=338.12 Aligned_cols=243 Identities=21% Similarity=0.295 Sum_probs=200.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|.|||++||+.||+|++|++.++..+++.++||+||.||.+.+...+.+.|+ ...+|++++ |.|
T Consensus 168 ~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~-----------~~~~~~~iv~~G~n 236 (438)
T PRK10879 168 HEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGA-----------RYPSYNTIVGSGEN 236 (438)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC-----------CCCCCCcEEEEcCc
Confidence 4589999999999999999999999999999999999999999998888877653 345676444 789
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEe-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVL-QDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDV 164 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~v-G~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV 164 (394)
.+++||.|+ ++.|++||+|++|+|+.|+||++|++|||+| |+ ++++++++|++++++++++++++|||+++++|
T Consensus 237 a~~~H~~~~---~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~--~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v 311 (438)
T PRK10879 237 GCILHYTEN---ESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGK--FTPAQREIYDIVLESLETSLRLYRPGTSIREV 311 (438)
T ss_pred cccccCCCC---ccccCCCCEEEEEeCeEECCEEEEeEEEEEECCc--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHH
Confidence 999999997 7899999999999999999999999999999 55 89999999999999999999999999999999
Q ss_pred HHHHHHHHH------------------HCCCc-cccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEcee
Q 016183 165 TEAIQKVAA------------------AHDCK-IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIV 225 (394)
Q Consensus 165 ~~ai~~~~~------------------~~G~~-~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~ 225 (394)
+.++.+++. +.++. ...|.+||++|+.+||.|. + . ++.+.+|++||||+|||+
T Consensus 312 ~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~-~---~----~~~~~~L~~GmV~tvEPg 383 (438)
T PRK10879 312 TGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGV-Y---G----QDRSRILEPGMVLTVEPG 383 (438)
T ss_pred HHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCC-c---C----CCCCCcCCCCCEEEECCE
Confidence 999886643 23332 2356689999999998772 1 1 124679999999999999
Q ss_pred eecCCCCCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeee
Q 016183 226 TSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLH 305 (394)
Q Consensus 226 is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~ 305 (394)
++..... ++-
T Consensus 384 iY~~~~~---------~~~------------------------------------------------------------- 393 (438)
T PRK10879 384 LYIAPDA---------DVP------------------------------------------------------------- 393 (438)
T ss_pred EEECCCc---------Ccc-------------------------------------------------------------
Confidence 9743211 000
Q ss_pred ecCCceeEEEEEEEEEcCCCceeecC-CCCccccCCCCCCcHHHHHHHH
Q 016183 306 EKPGDYVAHIKFTVLLMPNGSDRITS-HTLQEIQSTKTIDDPEIKAWLA 353 (394)
Q Consensus 306 ~~~g~~~aq~e~Tvlvt~~G~~~lT~-~~~~~~~s~~~~~d~e~~~ll~ 353 (394)
.+.+.+.+|+|+||+||++|+++||. .|.+ -+||.+|.+
T Consensus 394 ~~~~~~GiRiED~VlVT~~G~e~LT~~~pk~---------~~~iE~~m~ 433 (438)
T PRK10879 394 EQYRGIGIRIEDDIVITETGNENLTASVVKK---------PDEIEALMA 433 (438)
T ss_pred cccCccEEEeccEEEECCCcCeEcCccCCCC---------HHHHHHHHH
Confidence 12234579999999999999999996 5553 477877774
No 22
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-41 Score=336.17 Aligned_cols=196 Identities=22% Similarity=0.369 Sum_probs=177.8
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
+++|.|||+.||+.||+|++|++.++..+++.+++|+||.||.+.++..+.+.|+ .+.+|++++ +.|
T Consensus 149 ~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~-----------~~~sf~~iv~~G~n 217 (384)
T COG0006 149 DRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGA-----------EGPSFDTIVASGEN 217 (384)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCC-----------CccCcCcEEecccc
Confidence 6799999999999999999999999999999999999999999999999988753 345788666 799
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
.+++||.|+ ++.+++||+|+||+|+.|+||++|+||||++|+ ++++++++|+++++|++++++++|||+++++|+
T Consensus 218 ~a~pH~~~~---~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~--~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd 292 (384)
T COG0006 218 AALPHYTPS---DRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGK--PSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVD 292 (384)
T ss_pred ccCcCCCCC---cccccCCCEEEEEeeeEECCccccceeEEecCC--CCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 999999998 788999999999999999999999999999996 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCcc-ccCccccccc--cccccCCceecccCCCCCCCCCceeeCCcEEEEceee
Q 016183 166 EAIQKVAAAHDCKI-VEGVLSHQLK--QFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVT 226 (394)
Q Consensus 166 ~ai~~~~~~~G~~~-~~~~~GHgiG--~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~i 226 (394)
.++++++.+.|+.. ..+.+|||+| +.+||.|..+ .++...+|++||||++||++
T Consensus 293 ~~ar~~i~~~g~~~~~~h~~GHgvG~~l~vhE~p~~~-------~~~~~~~L~~GMv~t~Epg~ 349 (384)
T COG0006 293 AAARQVLEKAGYGLYFLHGTGHGVGFVLDVHEHPQYL-------SPGSDTTLEPGMVFSIEPGI 349 (384)
T ss_pred HHHHHHHHhcCCcccccCCccccCCCCcccCcCcccc-------CCCCCccccCCcEEEecccc
Confidence 99999999977753 4556899999 9999999411 12357899999999999984
No 23
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=1.2e-39 Score=328.62 Aligned_cols=196 Identities=20% Similarity=0.228 Sum_probs=170.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcc-cceeecCCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVA-FPSCVSVNN 86 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~a-fp~~vs~n~ 86 (394)
.+.|.|||++||+.||+|++|++++++.+.+.++||+||.||.+.+...+...+.. +++ |+++.+..+
T Consensus 173 ~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~-----------~~~~~~~v~~G~~ 241 (406)
T PRK14575 173 NELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSET-----------HFSRFHLISVGAD 241 (406)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCC-----------cCCcCceEEECCC
Confidence 57999999999999999999999999999999999999999999998877665431 222 333333334
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016183 87 TLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
..+|+.|+ ++.|++||+|.+|+|+.|+||++|++|||++|+ ++++++++|++++++++++++++|||++++||++
T Consensus 242 ~~~h~~~~---~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~--~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~ 316 (406)
T PRK14575 242 FSPKLIPS---NTKACSGDLIKFDCGVDVDGYGADIARTFVVGE--PPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFD 316 (406)
T ss_pred cccCCCCC---CCcCCCCCEEEEEeceEECCEeeeeEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 66899887 789999999999999999999999999999997 8999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCc-cccCcccccccc--ccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 167 AIQKVAAAHDCK-IVEGVLSHQLKQ--FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 167 ai~~~~~~~G~~-~~~~~~GHgiG~--~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
++++++++.|+. ...+++|||+|. .+|+.| .+. . +.+.+|++||||+|||+++
T Consensus 317 a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P-~i~--~-----~~~~~Le~GMv~tiEpgiy 372 (406)
T PRK14575 317 STMEVIKKSGLPNYNRGHLGHGNGVFLGLEESP-FVS--T-----HATESFTSGMVLSLETPYY 372 (406)
T ss_pred HHHHHHHHcCCccccCCCCCCcccCCCCCccCC-CCC--C-----CCCCCcCCCCEEEECCeee
Confidence 999999999996 346789999996 778888 332 1 2467999999999999885
No 24
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.2e-39 Score=304.46 Aligned_cols=196 Identities=17% Similarity=0.192 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCccc-c-eeecCCCcccCCCCCCC
Q 016183 19 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAF-P-SCVSVNNTLCHFSPLAS 96 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~af-p-~~vs~n~~~~H~~P~~~ 96 (394)
|++||+|++|++++++.+.+.++||+||.||++.+...+.+.|+..|... ....+ | +..|.|...+|+.|+
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~-----~~~~~~~~v~~G~~~~~~H~~~~-- 73 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEV-----ELMDTWTWFQSGINTDGAHNPVT-- 73 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcc-----cccCcceEEEeeccccccCCCCC--
Confidence 57899999999999999999999999999999999998888775322110 00011 2 334799999999886
Q ss_pred CCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCC
Q 016183 97 DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHD 176 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G 176 (394)
+++|++||+|.+|+|+.++||++|++|||++|+ ++++++++|+++.+|++++++++|||++++||+++++++++++|
T Consensus 74 -~r~l~~GD~v~~d~g~~~~GY~ad~~RT~~vG~--~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G 150 (228)
T cd01090 74 -NRKVQRGDILSLNCFPMIAGYYTALERTLFLDE--VSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHD 150 (228)
T ss_pred -CcccCCCCEEEEEEeEEECCEeeeeEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Confidence 789999999999999999999999999999997 89999999999999999999999999999999999999999999
Q ss_pred Cccc-cCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 177 CKIV-EGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 177 ~~~~-~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
+... .+.+|||+|+..||.|..+.. ....+.+.+|++||||+|||+++
T Consensus 151 ~~~~~~~~~GHgiGl~~he~~~~~g~---~~~~~~~~~Le~GMV~~iEP~i~ 199 (228)
T cd01090 151 LLRYRTFGYGHSFGVLSHYYGREAGL---ELREDIDTVLEPGMVVSMEPMIM 199 (228)
T ss_pred CCcccccccCcccccccccCCCcccc---ccCCCCCCccCCCCEEEECCEEe
Confidence 8754 456899999999987732110 01123568999999999999987
No 25
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=2.9e-39 Score=324.66 Aligned_cols=204 Identities=13% Similarity=0.051 Sum_probs=168.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
++.|+|||++||++||+|++|++++++.+.+.++||+||.||.+.+...... +. .. .+....+|.+++ +.|
T Consensus 153 ~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~-~~---~~---~g~~~~~~~~iv~sG~~ 225 (391)
T TIGR02993 153 NWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIR-GV---DG---FGGDYPAIVPLLPSGAD 225 (391)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhh-cc---cC---cCCCcCCcccccccCcc
Confidence 6789999999999999999999999999999999999999999876533221 10 00 011122344333 578
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
...+|+.|+ ++.|++||+|.+|+|+.|+||++|++|||++|+ ++++++++|+++++|++++++++|||++++||+
T Consensus 226 ~a~pH~~~~---~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~--p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~ 300 (391)
T TIGR02993 226 ASAPHLTWD---DSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGK--PTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIA 300 (391)
T ss_pred ccCCCCCCC---CCcccCCCEEEEEeeeecccCccceeEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 889999987 789999999999999999999999999999997 889999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 166 EAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 166 ~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
++++++++++|+.. .+.+|||||+.+|+.+... .| .-.++.+.+|++||||+|||+++
T Consensus 301 ~~~~~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~--~~-~l~~~~~~~L~~GMv~tvEpgiy 358 (391)
T TIGR02993 301 NAFFAVLKKYGIHK-DSRTGYPIGLSYPPDWGER--TM-SLRPGDNTVLKPGMTFHFMTGLW 358 (391)
T ss_pred HHHHHHHHHcCCcc-CCCceeeeccCcCCCCCCc--cc-cccCCCCceecCCCEEEEcceeE
Confidence 99999999999965 5789999999887432110 00 01224568999999999999875
No 26
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=3.9e-39 Score=303.74 Aligned_cols=188 Identities=19% Similarity=0.255 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCCcccCCCCCCC
Q 016183 19 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNNTLCHFSPLAS 96 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~~~~H~~P~~~ 96 (394)
|++||+|++|++++++.+.+.++||+||.||++.++..+.+.|+. .+|+ ++.|.|...+|+.|+
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~------------~~~~~~v~~g~~~~~~H~~~~-- 66 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGAR------------LAYSYIVAAGSNAAILHYVHN-- 66 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCC------------cCCCCeEEECCCccccCCCcC--
Confidence 579999999999999999999999999999999999988887652 2354 555899999999997
Q ss_pred CCccccCCCEEEEEeeeEECceEEeEEEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHC
Q 016183 97 DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQ-DGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAH 175 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG-~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~ 175 (394)
+++|++||+|++|+|+.|+||++|++|||++| + ++++++++|+++.++++++++.+|||++++||++++++++++.
T Consensus 67 -~~~l~~Gd~v~vD~g~~~~GY~ad~~Rt~~vgg~--~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~ 143 (243)
T cd01087 67 -DQPLKDGDLVLIDAGAEYGGYASDITRTFPVNGK--FTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEG 143 (243)
T ss_pred -CCcCCCCCEEEEEeCceECCEeeeeeEEEEeCCc--CCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999994 5 8899999999999999999999999999999999999998765
Q ss_pred CC-------------------ccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecC
Q 016183 176 DC-------------------KIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTG 229 (394)
Q Consensus 176 G~-------------------~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g 229 (394)
|+ ....+.+|||+|+.+||.|. +... ++.+.+|++||||+|||+++..
T Consensus 144 ~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~-~~~~-----~~~~~~l~~GMv~~iEp~iy~~ 210 (243)
T cd01087 144 LKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDVGG-YLRY-----LRRARPLEPGMVITIEPGIYFI 210 (243)
T ss_pred HHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccCcc-cccc-----CCCCCCCCCCCEEEECCEEEeC
Confidence 32 23345689999999999883 2111 2356899999999999999743
No 27
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=9.1e-39 Score=322.17 Aligned_cols=196 Identities=19% Similarity=0.176 Sum_probs=169.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee-cCCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV-SVNN 86 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v-s~n~ 86 (394)
.+.|+|||++||+.||+|++|++.++..+.+.++||+||.||.+.++..+.+.|.. ++++.+++ +..+
T Consensus 172 ~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~-----------~~~~~~~v~~G~~ 240 (405)
T PRK14576 172 NEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPET-----------NFSRFNLISVGDN 240 (405)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCC-----------cCCCCCEEEECCc
Confidence 57899999999999999999999999999999999999999999998877765421 22222344 3333
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016183 87 TLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
..+|+.|+ ++.|++||+|++|+|+.|+||++|++|||++|+ ++++++++|+++.++++++++++|||++++||++
T Consensus 241 ~~~h~~~~---~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~--p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~ 315 (405)
T PRK14576 241 FSPKIIAD---TTPAKVGDLIKFDCGIDVAGYGADLARTFVLGE--PDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFD 315 (405)
T ss_pred ccCCCCCC---CcccCCCCEEEEEeceeECCEEeeeeEEEECCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 66899887 789999999999999999999999999999997 8899999999999999999999999999999999
Q ss_pred HHHHHHHHCCCc-cccCccccccc--cccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 167 AIQKVAAAHDCK-IVEGVLSHQLK--QFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 167 ai~~~~~~~G~~-~~~~~~GHgiG--~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
+++++++++|+. ...+++|||+| ..+|+.| .+ .+ +.+.+|++||||+|||+++
T Consensus 316 a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~P-~i--~~-----~~~~~Le~GMv~~vEp~~y 371 (405)
T PRK14576 316 STMAVIKTSGLPHYNRGHLGHGDGVFLGLEEVP-FV--ST-----QATETFCPGMVLSLETPYY 371 (405)
T ss_pred HHHHHHHHcCCccccCCCCCCCCCCCCCcCcCC-Cc--CC-----CCCCccCCCCEEEECCcee
Confidence 999999999986 34578999999 6778887 33 11 2467999999999998654
No 28
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=3.3e-37 Score=313.01 Aligned_cols=204 Identities=15% Similarity=0.144 Sum_probs=164.8
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.+.|+|||++||+.||+|++|++++++.+++.++||+||.||.+.. +...+. +..+++|++|+ +.|
T Consensus 156 ~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~---~~~~~~---------~~~~~~y~~iva~G~n 223 (443)
T PRK13607 156 HYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAY---LTATGQ---------RDNDVPYGNIVALNEH 223 (443)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHH---HHHhCC---------CCcCCCCCcEEEecCc
Confidence 5789999999999999999999999999999999999999998753 222221 22357788777 578
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..++||.|+ +.+.+++||+|+||+|+.++||++|+||||+ |. +++++.++|+++++|++++++++|||+++.||+
T Consensus 224 aa~~H~~~~--~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~--~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~ 298 (443)
T PRK13607 224 AAVLHYTKL--DHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AK--EDNDFAALIKDVNKEQLALIATMKPGVSYVDLH 298 (443)
T ss_pred ceEecCCcc--CCCCCCCCCEEEEEeeEEECCEEecceEEEe-cC--CCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHH
Confidence 899999987 2357899999999999999999999999999 64 789999999999999999999999999999999
Q ss_pred HHHHHHH----HHCCCc----------------cccCccccccccccccCCceecc------cCCCCCC--CCCceeeCC
Q 016183 166 EAIQKVA----AAHDCK----------------IVEGVLSHQLKQFVIDGNKVVLS------VSNPDTR--VDDAEFEEN 217 (394)
Q Consensus 166 ~ai~~~~----~~~G~~----------------~~~~~~GHgiG~~~~e~p~~I~~------~~~~~~~--~~~~~le~G 217 (394)
.++.+++ .+.|+. ...+.+||+||+.+||.+..... .+....+ ....+|++|
T Consensus 299 ~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~G 378 (443)
T PRK13607 299 IQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPG 378 (443)
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCC
Confidence 9988766 344443 24567899999999997521100 0000001 135799999
Q ss_pred cEEEEceeeec
Q 016183 218 EVYAVDIVTST 228 (394)
Q Consensus 218 mV~aIEp~is~ 228 (394)
|||||||+++.
T Consensus 379 mV~TvEPGiY~ 389 (443)
T PRK13607 379 MVLTIEPGLYF 389 (443)
T ss_pred cEEEECCeeee
Confidence 99999999984
No 29
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.9e-36 Score=278.05 Aligned_cols=185 Identities=23% Similarity=0.349 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCCCcccCCCCCCC
Q 016183 19 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVNNTLCHFSPLAS 96 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n~~~~H~~P~~~ 96 (394)
|++||+|++|++.++..+.+.++||+|+.||++.+...+.+.|+ .+++||+++ +.|...+|+.|+
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~-----------~~~~~~~~v~~g~~~~~~h~~~~-- 67 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGA-----------EGPSFDTIVASGPNSALPHGVPS-- 67 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCC-----------CCCCCCcEEEECccccccCCCCC--
Confidence 57999999999999999999999999999999999888877643 356788666 578888999987
Q ss_pred CCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCC
Q 016183 97 DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHD 176 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G 176 (394)
+++|++||+|++|+|++|+||++|++||+++|+ ++++++++++++.++++++++.+|||++++||+++++++++++|
T Consensus 68 -~~~l~~gd~v~id~g~~~~gy~~d~~RT~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g 144 (208)
T cd01092 68 -DRKIEEGDLVLIDFGAIYDGYCSDITRTVAVGE--PSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAG 144 (208)
T ss_pred -CcCcCCCCEEEEEeeeeECCEeccceeEEECCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcC
Confidence 688999999999999999999999999999997 78999999999999999999999999999999999999999999
Q ss_pred Ccc-ccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 177 CKI-VEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 177 ~~~-~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
+.. ..+.+||++|...||.| .| .+ +.+.+|++||||+|||+++
T Consensus 145 ~~~~~~~~~Gh~iG~~~~e~p-~i--~~-----~~~~~l~~gmv~~iep~~~ 188 (208)
T cd01092 145 YGEYFIHRTGHGVGLEVHEAP-YI--SP-----GSDDVLEEGMVFTIEPGIY 188 (208)
T ss_pred ccccCCCCCccccCcccCcCC-Cc--CC-----CCCCCcCCCCEEEECCeEE
Confidence 863 35668999999999988 33 11 2568999999999999875
No 30
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.6e-35 Score=272.14 Aligned_cols=184 Identities=27% Similarity=0.365 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH-HHHhhcccchhhhhccccCcccc--eeecCCCcccCCCCCCC
Q 016183 20 TKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSF-IREQTGNMYKNVKKKIERGVAFP--SCVSVNNTLCHFSPLAS 96 (394)
Q Consensus 20 ~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~-i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~~~~H~~P~~~ 96 (394)
++||+|++|++.+++.+++.++||+|+.||++.+.+. +.+.| ..+++|| ++.+.|...+|+.|.
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g-----------~~~~~~~~~~~~g~~~~~~~~~~~-- 67 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHG-----------GEEPAFPPIVGSGPNTDLPHYTPT-- 67 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTT-----------TTEESSESEEEECCCCGETTTBCC--
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcC-----------CCcccCCceEecCCcceecceecc--
Confidence 5899999999999999999999999999999999987 44443 2356677 344789999999885
Q ss_pred CCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCC
Q 016183 97 DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHD 176 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G 176 (394)
++.|++||+|++|+|++|+||++|++||+++| +++++++++++++++++.+++.+|||++++||++++.++++++|
T Consensus 68 -~~~l~~gd~v~id~~~~~~gy~~d~~Rt~~~G---~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g 143 (207)
T PF00557_consen 68 -DRRLQEGDIVIIDFGPRYDGYHADIARTFVVG---PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYG 143 (207)
T ss_dssp -SSBESTTEEEEEEEEEEETTEEEEEEEEEESS---SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTT
T ss_pred -ceeeecCCcceeeccceeeeeEeeeeeEEEEe---ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhc
Confidence 78999999999999999999999999999998 68899999999999999999999999999999999999999999
Q ss_pred C-ccccCccccccccccccC-CceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 177 C-KIVEGVLSHQLKQFVIDG-NKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 177 ~-~~~~~~~GHgiG~~~~e~-p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
+ ....+.+||+||+.+|+. | .|.. .+.+.+|++||||+|||++.
T Consensus 144 ~~~~~~~~~GH~iG~~~~~~~P-~i~~------~~~~~~l~~gmv~~iep~~~ 189 (207)
T PF00557_consen 144 LEEPYPHGLGHGIGLEFHEPGP-NIAR------PGDDTVLEPGMVFAIEPGLY 189 (207)
T ss_dssp EGEEBTSSSEEEESSSSSEEEE-EESS------TTTSSB--TTBEEEEEEEEE
T ss_pred ccceeeecccccccccccccce-eeec------ccccceecCCCceeEeeeEE
Confidence 9 677889999999999986 7 4421 12578999999999999764
No 31
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=1.8e-35 Score=275.43 Aligned_cols=187 Identities=13% Similarity=0.132 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC--CcHHHHHHHHHHHHHHhhcccchhhhhccccCcccce--eecCCCcccCCCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPG--VKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPS--CVSVNNTLCHFSPLAS 96 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG--~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~--~vs~n~~~~H~~P~~~ 96 (394)
.+|.+..+ .++++.+.+.++|| +||.||++.+++++...+ ++.+.+||+ |+|.|.+++|+.|++.
T Consensus 6 ~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g----------~~~~~~f~~~v~~g~n~~~~H~~p~~~ 74 (224)
T cd01085 6 HIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQK----------GYVGLSFDTISGFGPNGAIVHYSPTEE 74 (224)
T ss_pred HHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcC----------CCcCCCcceEEEecCccCcCCCCcCcc
Confidence 45555544 69999999999999 999999999998776543 223566874 4479999999999743
Q ss_pred CCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCCChhHHHHHHHHHHHHC
Q 016183 97 DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLV-RPGKKNKDVTEAIQKVAAAH 175 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~l-kPG~~~~dV~~ai~~~~~~~ 175 (394)
++++|++||+|++|+|+.++||++|++|||++|+ ++++++++|+++++++.++++.+ +||+.+++|++++++++.+.
T Consensus 75 ~~r~l~~GD~V~iD~g~~~~gY~aD~~RT~~vG~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~ 152 (224)
T cd01085 75 SNRKISPDGLYLIDSGGQYLDGTTDITRTVHLGE--PTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKA 152 (224)
T ss_pred cCcccCCCCEEEEEeCccCCCcccccEEeecCCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999999999997 88999999999999999999988 59999999999999999999
Q ss_pred CCccccCcccccccc--ccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 176 DCKIVEGVLSHQLKQ--FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 176 G~~~~~~~~GHgiG~--~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
|+. ..+.+|||||+ .+||.| .++.. ++.+.+|++||||+|||+++
T Consensus 153 g~~-~~h~~GHgIG~~l~~hE~P-~i~~~-----~~~~~~L~~GmvftiEP~iy 199 (224)
T cd01085 153 GLD-YGHGTGHGVGSFLNVHEGP-QSISP-----APNNVPLKAGMILSNEPGYY 199 (224)
T ss_pred CCC-CCCCCCCCCCCCCcCCCCC-CcCCc-----CCCCCCcCCCCEEEECCEeE
Confidence 985 34679999994 779998 33211 23567999999999999986
No 32
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=4.2e-35 Score=275.98 Aligned_cols=192 Identities=16% Similarity=0.181 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----hccCC--CcHHHHHHHHHHHHHHhhccc--chhhhhccccCcccceee--cCCC-
Q 016183 19 VTKYKSAAEIANKALQLVVS-----ECKPG--VKIVDLCEKGDSFIREQTGNM--YKNVKKKIERGVAFPSCV--SVNN- 86 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~-----~i~pG--~te~el~~~~~~~i~~~g~~~--f~~~~~~~~~g~afp~~v--s~n~- 86 (394)
++.+|+|++++..+|+.... .+.+| +|+.+|+..++..|.+.+... +.. ..-+++||+++ +.|.
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~----~~~~~~y~~iv~sG~~~~ 76 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDP----EQLDWCYPPIIQSGGNYD 76 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCH----HHcCcccCCeEeECcCcc
Confidence 36899999999999976665 89999 999999999999999876321 111 11367898666 4666
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016183 87 TLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
..+|+.++ ++.+..||+|.+|+|+.|+|||+|++|||++| ++++++++|++++++++++++.+|||+++++|++
T Consensus 77 ~l~h~~~s---~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~---p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~ 150 (243)
T cd01091 77 LLKSSSSS---DKLLYHFGVIICSLGARYKSYCSNIARTFLID---PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQ 150 (243)
T ss_pred cCCCCCCC---ccccCCCCEEEEEeCcccCCEeecceEEEEcC---CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHH
Confidence 57888876 67899999999999999999999999999997 6899999999999999999999999999999999
Q ss_pred HHHHHHHHCCCccc---cCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 167 AIQKVAAAHDCKIV---EGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 167 ai~~~~~~~G~~~~---~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
++.+++++.|.... .+.+|||||+.+||.|..+ . + +.+.+|++||||+|||+++
T Consensus 151 ~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~~l-~-~-----~~~~~L~~GMvf~vepGi~ 207 (243)
T cd01091 151 KTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSLII-N-A-----KNDRKLKKGMVFNLSIGFS 207 (243)
T ss_pred HHHHHHHHhChhHHHhCcCCcccccCcccccCcccc-C-C-----CCCCCcCCCCEEEEeCCcc
Confidence 99999999875443 3458999999999987322 1 1 2457999999999999986
No 33
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.3e-34 Score=263.76 Aligned_cols=184 Identities=27% Similarity=0.373 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCCCCCCC
Q 016183 19 VTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFSPLAS 96 (394)
Q Consensus 19 I~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~P~~~ 96 (394)
|+.||+|++|++.++..+...++||+|+.||++.+.+.+.+.|+ +++|+++++.|. ..+|+.|.
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~------------~~~~~~~v~~g~~~~~~h~~~~-- 66 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGG------------YPAGPTIVGSGARTALPHYRPD-- 66 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCC------------CCCCCcEEEECccccCcCCCCC--
Confidence 47899999999999999999999999999999999988887653 456788887665 79999987
Q ss_pred CCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCC
Q 016183 97 DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHD 176 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G 176 (394)
+++|++||+|++|+|+.++||++|++||+++|+ ++++++++++++.++++++++.+|||+++.||+++++++++++|
T Consensus 67 -~~~i~~gd~v~~d~g~~~~gy~~d~~rt~~~g~--~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g 143 (207)
T cd01066 67 -DRRLQEGDLVLVDLGGVYDGYHADLTRTFVIGE--PSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHG 143 (207)
T ss_pred -CCCcCCCCEEEEEeceeECCCccceeceeEcCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcC
Confidence 689999999999999999999999999999997 78999999999999999999999999999999999999999999
Q ss_pred C-ccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 177 C-KIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 177 ~-~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
+ ....+.+||++|+..||.|. + . +..+.+|++||||+|||+++
T Consensus 144 ~~~~~~~~~Gh~iG~~~~e~~~-~--~-----~~~~~~l~~gmv~~iep~~~ 187 (207)
T cd01066 144 LGPNFGHRTGHGIGLEIHEPPV-L--K-----AGDDTVLEPGMVFAVEPGLY 187 (207)
T ss_pred ccccCCCCCccccCcccCCCCC-c--C-----CCCCCCcCCCCEEEECCEEE
Confidence 8 46778899999999999883 2 1 12567999999999999875
No 34
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-32 Score=260.21 Aligned_cols=244 Identities=17% Similarity=0.246 Sum_probs=202.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
++.|.||||.|++.||+||.|+.+++-..+-.-+++..|..|++.++..++..|+ .-.|||+.| |.|
T Consensus 223 ~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGa-----------d~~AYpPVVAgG~n 291 (488)
T KOG2414|consen 223 ERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGA-----------DRLAYPPVVAGGKN 291 (488)
T ss_pred HHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCc-----------cccccCCeeecCcc
Confidence 7899999999999999999999999999999999999999999999888777654 456898777 688
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCC--CCChhH
Q 016183 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRP--GKKNKD 163 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkP--G~~~~d 163 (394)
..+.||+-+ +..|++||+|++|.||.+.||++|++|||.+. +..|+.|+++|+++++.++.+|..++| |.+..+
T Consensus 292 a~tIHY~~N---nq~l~d~emVLvDaGcelgGYvSDITRTWP~s-GkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~ 367 (488)
T KOG2414|consen 292 ANTIHYVRN---NQLLKDDEMVLVDAGCELGGYVSDITRTWPIS-GKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQ 367 (488)
T ss_pred cceEEEeec---ccccCCCcEEEEecCcccCceEccceeccCCC-CccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHH
Confidence 888999987 68899999999999999999999999999993 459999999999999999999999999 999999
Q ss_pred HHHHHHHHH----HHCCCc------------cccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016183 164 VTEAIQKVA----AAHDCK------------IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 164 V~~ai~~~~----~~~G~~------------~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
|+....+.+ ++.|+. ...+..||-+|..+||-|. + + .+..|+|||||||||+++
T Consensus 368 l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~-v---~------r~~pL~pg~ViTIEPGvY 437 (488)
T KOG2414|consen 368 LFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPT-V---S------RDIPLQPGMVITIEPGVY 437 (488)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCC-C---C------CCccCCCCceEEecCcee
Confidence 987665544 444532 3356679999999999983 2 2 347899999999999998
Q ss_pred cCCCCCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeec
Q 016183 228 TGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEK 307 (394)
Q Consensus 228 ~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~ 307 (394)
-+... ..+--|
T Consensus 438 IP~d~------d~P~~F--------------------------------------------------------------- 448 (488)
T KOG2414|consen 438 IPEDD------DPPEEF--------------------------------------------------------------- 448 (488)
T ss_pred cCccC------CCchHh---------------------------------------------------------------
Confidence 54221 101111
Q ss_pred CCceeEEEEEEEEEcCCCceeecCC-CCccccCCCCCCcHHHHHHHHcc
Q 016183 308 PGDYVAHIKFTVLLMPNGSDRITSH-TLQEIQSTKTIDDPEIKAWLALG 355 (394)
Q Consensus 308 ~g~~~aq~e~Tvlvt~~G~~~lT~~-~~~~~~s~~~~~d~e~~~ll~~~ 355 (394)
.++..++|+.|+|+++|+++||.. |.+ -.||.+|..+.
T Consensus 449 -rGIGiRIEDDV~i~edg~evLT~a~pKe---------i~~ie~l~~~~ 487 (488)
T KOG2414|consen 449 -RGIGIRIEDDVAIGEDGPEVLTAACPKE---------IIEIERLMKQA 487 (488)
T ss_pred -cCceEEeecceEeccCCceeehhcccCC---------HHHHHHHHhcc
Confidence 236689999999999999999985 333 46777777653
No 35
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=5.8e-32 Score=257.16 Aligned_cols=275 Identities=22% Similarity=0.239 Sum_probs=212.9
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc-eee-cCC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP-SCV-SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp-~~v-s~n 85 (394)
.+-|.||++.||+.||.|++|+++++.+++.+++||+.|.++...........|+ -+..+|. +|. +.|
T Consensus 180 ~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GG----------cRh~sYtcIc~sG~n 249 (492)
T KOG2737|consen 180 AECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGG----------CRHLSYTCICASGDN 249 (492)
T ss_pred hhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCC----------ccccccceeeecCCC
Confidence 5678999999999999999999999999999999999999999887666555543 2344563 444 689
Q ss_pred CcccCC----CCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 016183 86 NTLCHF----SPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKN 161 (394)
Q Consensus 86 ~~~~H~----~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~ 161 (394)
..+.|| .|+ ++.|++||+.++|+|+.|.+|.+|+|++|+.. ++.+.+|+.+|++++.++.+++.++|||+.+
T Consensus 250 s~vLHYgha~apN---d~~iqdgd~cLfDmGaey~~yaSDITcsFP~n-GKFTadqk~VYnaVLda~navm~a~KpGv~W 325 (492)
T KOG2737|consen 250 SAVLHYGHAGAPN---DRTIQDGDLCLFDMGAEYHFYASDITCSFPVN-GKFTADQKLVYNAVLDASNAVMEAMKPGVWW 325 (492)
T ss_pred cceeeccccCCCC---CcccCCCCEEEEecCcceeeeecccceeccCC-CccchhHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999 776 89999999999999999999999999999994 5699999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH----CC---------------CccccCccccccccccccCCceecccCCCCCC-----CCCceeeCC
Q 016183 162 KDVTEAIQKVAAA----HD---------------CKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTR-----VDDAEFEEN 217 (394)
Q Consensus 162 ~dV~~ai~~~~~~----~G---------------~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~-----~~~~~le~G 217 (394)
.|++....+++-+ .| +-...+-+||-+|+.+||-.......+....| ...+.|++|
T Consensus 326 ~Dmh~La~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~ 405 (492)
T KOG2737|consen 326 VDMHKLAEKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEG 405 (492)
T ss_pred ccHHHHHHHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcC
Confidence 9998877665433 33 22335667999999999865332222222222 245789999
Q ss_pred cEEEEceeeecCCCCCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCC
Q 016183 218 EVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHEL 297 (394)
Q Consensus 218 mV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~l 297 (394)
||++|||+++.-.. ++ ++--+.-...|+++..+
T Consensus 406 MviTvEPGcYFi~~------------------------------Ll-----------------~ealadp~~~~f~n~e~ 438 (492)
T KOG2737|consen 406 MVITVEPGCYFIDF------------------------------LL-----------------DEALADPARAEFLNREV 438 (492)
T ss_pred cEEEecCChhHHHH------------------------------HH-----------------HHHhcChHhhhhhhHHH
Confidence 99999999873111 11 11122223345555555
Q ss_pred ccccCeeeecCCceeEEEEEEEEEcCCCceeecCCCCccccCCCCCCcHHHHHHHHccccc
Q 016183 298 LQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLALGIKT 358 (394)
Q Consensus 298 l~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~~~~~~~~s~~~~~d~e~~~ll~~~~~~ 358 (394)
++.|. --.| +++|+.|+||.+|++.||..|.. -|||.+..+...++
T Consensus 439 ~~rfr---~~GG---VRIEdDv~vt~~G~enlt~vprt---------veeIEa~ma~g~~~ 484 (492)
T KOG2737|consen 439 LQRFR---GFGG---VRIEDDVVVTKSGIENLTCVPRT---------VEEIEACMAGGDKA 484 (492)
T ss_pred HHHhh---ccCc---eEeeccEEEeccccccccCCCCC---------HHHHHHHHhcCCCC
Confidence 66563 2233 89999999999999999999974 68999999876544
No 36
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.89 E-value=1e-22 Score=207.51 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=197.3
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHH-----HHhccCC--CcHHHHHHHHHHHHHHhhcccchhhhhccccCccccee
Q 016183 9 KELDLTSPEVVTKYKSAAEIANKALQLV-----VSECKPG--VKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSC 81 (394)
Q Consensus 9 ~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v-----~~~i~pG--~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~ 81 (394)
.+..+|++.||+.+|.|+.++..+|... ..++-.| +|..-|...++..|.+.-..+=.. .-.-.++||++
T Consensus 133 ~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~---~~~~d~cY~PI 209 (960)
T KOG1189|consen 133 KLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLD---PDLLDMCYPPI 209 (960)
T ss_pred hheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccC---ccccccccChh
Confidence 4668999999999999999999999843 3344444 688889988888887632211000 01135788877
Q ss_pred e-cCCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 016183 82 V-SVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKK 160 (394)
Q Consensus 82 v-s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~ 160 (394)
+ |....-..++.. +++..| | +|++.+|++|++||++++||+.|. |+.++++.|+..+.++++++..||||..
T Consensus 210 iqSGg~ydlk~sa~-s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Lid---pssemq~nY~fLl~aqe~il~~lrpG~k 282 (960)
T KOG1189|consen 210 IQSGGKYDLKPSAV-SDDNHL--H-VILCSLGIRYNSYCSNVSRTYLID---PSSEMQENYEFLLAAQEEILKLLRPGTK 282 (960)
T ss_pred hhcCCccccccccc-cccccc--c-eEEeeccchhhhhhccccceeeec---chHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 7 766666666554 456778 4 999999999999999999999996 8999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHCCCccccCc---cccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccC
Q 016183 161 NKDVTEAIQKVAAAHDCKIVEGV---LSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLD 237 (394)
Q Consensus 161 ~~dV~~ai~~~~~~~G~~~~~~~---~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~ 237 (394)
.++||.++..++++.+...+.++ +|.|||+.+.|.. .+++.. .+.+|++||||.|..++++-...
T Consensus 283 i~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREss-l~inaK------nd~~lk~gmvFni~lGf~nl~n~----- 350 (960)
T KOG1189|consen 283 IGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESS-LVINAK------NDRVLKKGMVFNISLGFSNLTNP----- 350 (960)
T ss_pred hhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeeccc-cccccc------chhhhccCcEEEEeeccccccCc-----
Confidence 99999999999999998766554 5999999999988 444443 45899999999999887632211
Q ss_pred CCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEE
Q 016183 238 EKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKF 317 (394)
Q Consensus 238 ~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~ 317 (394)
+..+.|..++-+
T Consensus 351 --------------------------------------------------------------------~~~~~yaL~l~D 362 (960)
T KOG1189|consen 351 --------------------------------------------------------------------ESKNSYALLLSD 362 (960)
T ss_pred --------------------------------------------------------------------ccccchhhhccc
Confidence 122347788899
Q ss_pred EEEEcCCCc-eeecCCCCccccCCCCCCcHH
Q 016183 318 TVLLMPNGS-DRITSHTLQEIQSTKTIDDPE 347 (394)
Q Consensus 318 Tvlvt~~G~-~~lT~~~~~~~~s~~~~~d~e 347 (394)
||||+++++ ++||..+....+..+.+.|+|
T Consensus 363 Tvlv~e~~p~~vLT~~~K~~~dv~~~f~~ee 393 (960)
T KOG1189|consen 363 TVLVGEDPPAEVLTDSAKAVKDVSYFFKDEE 393 (960)
T ss_pred eeeecCCCcchhhcccchhhcccceeeccch
Confidence 999999998 999998887777888887655
No 37
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.5e-20 Score=187.85 Aligned_cols=210 Identities=15% Similarity=0.157 Sum_probs=170.5
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHH----HHHHHhccCC--CcHHHHHHHHHHHHHHhhcccchhhhhccccCccccee
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKAL----QLVVSECKPG--VKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSC 81 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l----~~v~~~i~pG--~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~ 81 (394)
....++|+++|++.||.|----..|+ ..+-..+..| +||.+++..++++=..+ .++.|.+|+|+
T Consensus 302 ~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~----------~~fmglSFeTI 371 (606)
T KOG2413|consen 302 SRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQ----------DHFMGLSFETI 371 (606)
T ss_pred HHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhh----------ccccCcCccee
Confidence 45679999999999998754444444 4444455667 89999999988765443 25678999998
Q ss_pred e---cCCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-
Q 016183 82 V---SVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRP- 157 (394)
Q Consensus 82 v---s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkP- 157 (394)
. |+|..+.||+|.+..++.+.+-.+.++|.|++|.-=.+|+|||+.+|+ ||.+.++.|..++..+-+..+++-|
T Consensus 372 S~s~G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hfge--Ps~eek~~yT~VLkGhi~la~~vFP~ 449 (606)
T KOG2413|consen 372 SSSVGPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGE--PTAEEKEAYTLVLKGHIALARAVFPK 449 (606)
T ss_pred eccCCCCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCC--CCHHHHHHHHHHHHhhhHhhhcccCC
Confidence 8 689999999998766789999999999999999888999999999998 8999999999999999999998876
Q ss_pred CCChhHHHHHHHHHHHHCCCccccCccccccccc--cccCCceecccCCCCCCCCCceeeCCcEEEEceeee-cCCCCCc
Q 016183 158 GKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQF--VIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS-TGDGKPK 234 (394)
Q Consensus 158 G~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~--~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is-~g~g~~~ 234 (394)
|.....+...++..+.+.|... .+-+|||+|.+ +||+|..|.+.+- .....|+.||++++||+.+ .|.+++|
T Consensus 450 ~t~g~~lD~laR~~LW~~gLDy-~HgTGHGVG~fLnVhE~P~~is~r~~----~~~~~l~ag~~~s~EPGYY~dg~fGIR 524 (606)
T KOG2413|consen 450 GTKGSVLDALARSALWKAGLDY-GHGTGHGVGSFLNVHEGPIGIGYRPY----SSNFPLQAGMVFSIEPGYYKDGEFGIR 524 (606)
T ss_pred CCCcchhHHHHHHHHHhhcccc-CCCCCcccccceEeccCCceeeeeec----CCCchhcCceEeccCCcccccCcceEE
Confidence 7788888888999999999854 66789999975 6999976654432 2567899999999999986 3344443
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.69 E-value=4e-16 Score=156.94 Aligned_cols=250 Identities=12% Similarity=0.134 Sum_probs=183.5
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH---hccCC---CcHHHHHHHHHHHHHHhhcccchhh--h----hccccC
Q 016183 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVS---ECKPG---VKIVDLCEKGDSFIREQTGNMYKNV--K----KKIERG 75 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~---~i~pG---~te~el~~~~~~~i~~~g~~~f~~~--~----~~~~~g 75 (394)
..+..+|+..||+.+|.+++.+...|..+.. .+..| +|...+...++..|.+.-. |... + +.-.-.
T Consensus 165 sk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f--~q~~s~~l~~~~~d~le 242 (1001)
T COG5406 165 SKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEF--FQTKSLKLGDIDLDQLE 242 (1001)
T ss_pred hHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhh--hhhcCccccccchhhhh
Confidence 4577899999999999999999999985443 33344 4666777776665544311 1110 0 001124
Q ss_pred cccceee-cCCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016183 76 VAFPSCV-SVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRL 154 (394)
Q Consensus 76 ~afp~~v-s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~ 154 (394)
|.|.+++ |........+.- +++..| .||+|++.+|.+|+|||+.++||+++. |+.++++-|+.++.++...+..
T Consensus 243 w~ytpiiqsg~~~Dl~psa~-s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~d---p~~e~~~Ny~fl~~lQk~i~~~ 317 (1001)
T COG5406 243 WCYTPIIQSGGSIDLTPSAF-SFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILTD---PDSEQQKNYEFLYMLQKYILGL 317 (1001)
T ss_pred hhcchhhccCceeecccccc-cCchhh-cCceEEEEeeeeeccccccccceEEeC---CchHhhhhHHHHHHHHHHHHhh
Confidence 5676555 555544433222 334555 489999999999999999999999996 7899999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHCCCccccCc---cccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCC
Q 016183 155 VRPGKKNKDVTEAIQKVAAAHDCKIVEGV---LSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDG 231 (394)
Q Consensus 155 lkPG~~~~dV~~ai~~~~~~~G~~~~~~~---~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g 231 (394)
+|||...++|+..+.+++.+.|.....+| +|-+||..+.+.. .+.+.. .+++|+.||+|.|..++.
T Consensus 318 ~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~-~~~nvk------n~r~lq~g~~fnis~gf~---- 386 (1001)
T COG5406 318 VRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQ-KPFNVK------NGRVLQAGCIFNISLGFG---- 386 (1001)
T ss_pred cCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccc-cceecc------CCceeccccEEEEeeccc----
Confidence 99999999999999999999998877766 4899999998876 444544 348999999998876542
Q ss_pred CCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCce
Q 016183 232 KPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDY 311 (394)
Q Consensus 232 ~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~ 311 (394)
.. ++|.| .+.|
T Consensus 387 nl----------------------------------------------------------------~~~~~-----~Nny 397 (1001)
T COG5406 387 NL----------------------------------------------------------------INPHP-----KNNY 397 (1001)
T ss_pred cc----------------------------------------------------------------CCCCc-----ccch
Confidence 22 11221 2336
Q ss_pred eEEEEEEEEEcCCCceeecCCCCccccCCCCCC
Q 016183 312 VAHIKFTVLLMPNGSDRITSHTLQEIQSTKTID 344 (394)
Q Consensus 312 ~aq~e~Tvlvt~~G~~~lT~~~~~~~~s~~~~~ 344 (394)
..++-+|+-|+-+-|.++|..|...-+.+|.+.
T Consensus 398 al~l~dt~qi~ls~p~~~t~~~kaq~~isf~fg 430 (1001)
T COG5406 398 ALLLIDTEQISLSNPIVFTDSPKAQGDISFLFG 430 (1001)
T ss_pred hhhhccceEeecCCceecccCcccccceeEEec
Confidence 778889999998889999998875445555553
No 39
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=96.85 E-value=0.018 Score=51.63 Aligned_cols=102 Identities=14% Similarity=0.204 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCCc
Q 016183 20 TKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET 99 (394)
Q Consensus 20 ~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~ 99 (394)
..+|++.+++.++++.+++.++||++..||...+.+.+.+.+...+.. ....+.+-....+.-. ..+ ..+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~------~~~Gh~iG~~~~e~~~-~~~--~~~~ 172 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFG------HRTGHGIGLEIHEPPV-LKA--GDDT 172 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCC------CCCccccCcccCCCCC-cCC--CCCC
Confidence 578899999999999999999999999999999999999876521110 0111211111111100 112 2357
Q ss_pred cccCCCEEEEEeeeEEC-ceEEeEEEEEEeCC
Q 016183 100 VLQEGDMIKIDLGCHID-GFIAVVAHTHVLQD 130 (394)
Q Consensus 100 ~L~~GDvV~iDlG~~~d-GY~ad~aRT~~vG~ 130 (394)
+|++|.++.|+.+.... ++..-+..|++|.+
T Consensus 173 ~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 173 VLEPGMVFAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred CcCCCCEEEECCEEEECCCcEEEeeeEEEEeC
Confidence 89999999999999887 58899999999963
No 40
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.67 E-value=0.025 Score=53.38 Aligned_cols=105 Identities=13% Similarity=0.324 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCCc
Q 016183 20 TKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET 99 (394)
Q Consensus 20 ~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~ 99 (394)
+..|++-+++.++.+.+++.++||++..||...+.+++.+.+...... ...++++.+-+...+.-....| .+++
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~----~~~~~GHgiGle~hE~~~~l~~--~~~~ 192 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPN----FTKNLGFGIGLEFRESSLIINA--KNDR 192 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHh----CcCCcccccCcccccCccccCC--CCCC
Confidence 356778889999999999999999999999999999998864221100 1123334444433332111122 2358
Q ss_pred cccCCCEEEEEeeeE-EC----------ceEEeEEEEEEeCC
Q 016183 100 VLQEGDMIKIDLGCH-ID----------GFIAVVAHTHVLQD 130 (394)
Q Consensus 100 ~L~~GDvV~iDlG~~-~d----------GY~ad~aRT~~vG~ 130 (394)
+|++|-++.|..|.. +. .|-.-++.|++|.+
T Consensus 193 ~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 193 KLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 899999999999986 32 57888999999964
No 41
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=96.50 E-value=0.039 Score=50.07 Aligned_cols=100 Identities=22% Similarity=0.282 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCC--CCC
Q 016183 20 TKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPL--ASD 97 (394)
Q Consensus 20 ~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~--~~~ 97 (394)
+.+|++.+.+.++++.+++.++||++..||.+.+.+.+.+.|...|.. ....+.+... .|-.|. +.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~------~~~Gh~iG~~-----~~e~p~i~~~~ 171 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFI------HRTGHGVGLE-----VHEAPYISPGS 171 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCC------CCCccccCcc-----cCcCCCcCCCC
Confidence 466788899999999999999999999999999999998876432110 0111222111 122221 124
Q ss_pred CccccCCCEEEEEeeeEECce-EEeEEEEEEeCC
Q 016183 98 ETVLQEGDMIKIDLGCHIDGF-IAVVAHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dGY-~ad~aRT~~vG~ 130 (394)
+..|++|.++.|+.+....|+ -.-+.-|++|.+
T Consensus 172 ~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~vt~ 205 (208)
T cd01092 172 DDVLEEGMVFTIEPGIYIPGKGGVRIEDDVLVTE 205 (208)
T ss_pred CCCcCCCCEEEECCeEEecCCCEEEeeeEEEECC
Confidence 688999999999999877655 444788888853
No 42
>PRK05716 methionine aminopeptidase; Validated
Probab=96.18 E-value=0.073 Score=50.11 Aligned_cols=101 Identities=20% Similarity=0.306 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCC-CCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHF-SPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~-~P~~~~ 97 (394)
..|++.+++.++.+.+++.++||++..||.+.+.+.+.+.|-..+.. ..++.+-+...+ .+.++ .| .+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~~~-------~~GHgiG~~~~e~p~~~~~~~~--~~ 189 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVVRE-------YCGHGIGRKFHEEPQIPHYGAP--GD 189 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeecC-------ccccccCCccCCCCccCcCCCC--CC
Confidence 45677888889999999999999999999999999999876543211 111222111111 11222 22 24
Q ss_pred CccccCCCEEEEEeeeEE------------------CceEEeEEEEEEeCC
Q 016183 98 ETVLQEGDMIKIDLGCHI------------------DGFIAVVAHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~------------------dGY~ad~aRT~~vG~ 130 (394)
+.+|++|.++.|+.+..+ +++..-+..|++|.+
T Consensus 190 ~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 190 GPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 678999999999988764 335667889999963
No 43
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.16 E-value=0.062 Score=54.34 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCC--CCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSP--LASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P--~~~~~ 98 (394)
.+|++-+++.++.+.+++.++||++..||...+.+.+.+.|-... .+..+++-++......+..| .+.++
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--------h~~GhgiGl~~~~~~~e~~~~l~~~~~ 342 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--------SRTGYPIGLSYPPDWGERTMSLRPGDN 342 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--------CCceeeeccCcCCCCCCccccccCCCC
Confidence 466788899999999999999999999999999999988763210 12223332221110001111 11245
Q ss_pred ccccCCCEEEEEeeeEECceEEeEEEEEEeC
Q 016183 99 TVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQ 129 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG 129 (394)
.+|++|-++.|.-|..+.|+-.-+..|++|.
T Consensus 343 ~~L~~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 343 TVLKPGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred ceecCCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 8899999999999998888767788899995
No 44
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.15 E-value=0.074 Score=49.63 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCC-CC--CCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHF-SP--LASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~-~P--~~~~ 97 (394)
..|++-+++.++++.+++.++||++-.||.+.+.+.+.+.|-..+.. .++.+.+-+..++. .|+ .| ...+
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~------~~~GHgiGl~~he~-~~~~g~~~~~~~ 182 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT------FGYGHSFGVLSHYY-GREAGLELREDI 182 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc------cccCcccccccccC-CCccccccCCCC
Confidence 46788889999999999999999999999999999998876433211 11222222222221 111 00 1123
Q ss_pred CccccCCCEEEEEeeeEEC----ce-EEeEEEEEEeCC
Q 016183 98 ETVLQEGDMIKIDLGCHID----GF-IAVVAHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~d----GY-~ad~aRT~~vG~ 130 (394)
+.+|++|.++.|+-+..+. |. -.-+..|++|.+
T Consensus 183 ~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 183 DTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCccCCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 5889999999999998763 32 233788988863
No 45
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.10 E-value=0.094 Score=49.30 Aligned_cols=102 Identities=16% Similarity=0.209 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCc--ccCCCCCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNT--LCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~--~~H~~P~~~~~ 98 (394)
..|++.+++.++++.+++.++||++..||...+.+.+.+.|-..+.. ..++.+.++..+. +.++.. ..++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~~~-------~~GHgiG~~~~e~p~i~~~~~-~~~~ 188 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVVRE-------YCGHGIGRKFHEEPQIPNYGK-KFTN 188 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEeccC-------ccCCccCcccCCCCccCCcCc-CCCC
Confidence 45677778888999999999999999999999999998876543211 1112222222111 111111 1236
Q ss_pred ccccCCCEEEEEeeeEE------------------CceEEeEEEEEEeCC
Q 016183 99 TVLQEGDMIKIDLGCHI------------------DGFIAVVAHTHVLQD 130 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~------------------dGY~ad~aRT~~vG~ 130 (394)
.+|++|.++.|+.+..+ +++..-+..|++|.+
T Consensus 189 ~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 189 VRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 78999999999988765 235666788999953
No 46
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.08 E-value=0.03 Score=56.60 Aligned_cols=101 Identities=13% Similarity=0.170 Sum_probs=65.9
Q ss_pred eEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccc-cCccccc----ccccc
Q 016183 118 FIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIV-EGVLSHQ----LKQFV 192 (394)
Q Consensus 118 Y~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~-~~~~GHg----iG~~~ 192 (394)
..++..++..|.+..--...+++.+.+.++++++.+.++||++-.||..++...+.++|..+. .++.++. .|.+
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N- 205 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVN- 205 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccc-
Confidence 345667777886411114567788888999999999999999999999999999888774321 1111110 1111
Q ss_pred ccCCceecccCCCCCCCCCceeeCCcEEEEceeeec
Q 016183 193 IDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTST 228 (394)
Q Consensus 193 ~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~ 228 (394)
+ .+.. +.+ ++..|++|+++.||.++..
T Consensus 206 -~---~i~H----gip-~~r~L~~GDiV~iDvg~~~ 232 (396)
T PLN03158 206 -E---VICH----GIP-DARKLEDGDIVNVDVTVYY 232 (396)
T ss_pred -c---cccC----CCC-CCccCCCCCEEEEEEeEEE
Confidence 0 1111 111 3568999999999998863
No 47
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.08 E-value=0.068 Score=51.86 Aligned_cols=88 Identities=14% Similarity=0.154 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCCCCCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~P~~~~~ 98 (394)
..|++.+++.++++.+++.++||++..||...+.+++.+.|-..+.. ...+.+-++..+ .+.++.+ +++
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~-------~~GHgIGl~~hE~P~i~~~~~--~~~ 229 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVVDQ-------FVGHGVGIKFHENPYVPHHRN--SSK 229 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCC-------cccCCcCccccCCCcccCcCC--CCC
Confidence 46778888999999999999999999999999999998876432111 111222222211 1222222 235
Q ss_pred ccccCCCEEEEEeeeEECc
Q 016183 99 TVLQEGDMIKIDLGCHIDG 117 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~dG 117 (394)
.+|++|.++.|.-+..+++
T Consensus 230 ~~L~~GMV~~iEP~i~~~~ 248 (291)
T PRK12318 230 IPLAPGMIFTIEPMINVGK 248 (291)
T ss_pred CEeCCCCEEEECCEEEcCC
Confidence 7899999999998877653
No 48
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.05 E-value=0.1 Score=48.85 Aligned_cols=109 Identities=16% Similarity=0.189 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chh----------h-hhccccCcccceeecCCCcc
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKN----------V-KKKIERGVAFPSCVSVNNTL 88 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~----------~-~~~~~~g~afp~~vs~n~~~ 88 (394)
..+++.+++.++++.+++.++||++..||.+.+.+.+.+.+.+. |.. . ......++.+.+-++..+ .
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~ 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-V 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-C
Confidence 56677888899999999999999999999999999888764321 100 0 000001122222222222 1
Q ss_pred cCCCCCCCCCccccCCCEEEEEeeeEECc-----------eEEeEEEEEEeCC
Q 016183 89 CHFSPLASDETVLQEGDMIKIDLGCHIDG-----------FIAVVAHTHVLQD 130 (394)
Q Consensus 89 ~H~~P~~~~~~~L~~GDvV~iDlG~~~dG-----------Y~ad~aRT~~vG~ 130 (394)
+++.+.+.++.+|++|-++.|..|..+.| +-.-+..|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 22211223468999999999999998765 5666889999953
No 49
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.03 E-value=0.1 Score=49.24 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC---cccCC-CCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN---TLCHF-SPLAS 96 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~---~~~H~-~P~~~ 96 (394)
.++++.+.+.++++.+++.++||++..+|.+.+++.+.+.|-..+.. ...+.+-....+ .+.++ .| .
T Consensus 124 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~~~~-------~~GHgiG~~~he~p~~~~~~~~~--~ 194 (255)
T PRK12896 124 EAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVVRD-------LTGHGVGRSLHEEPSVILTYTDP--L 194 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEeccC-------cccCCcCcccccCCCccccCCCC--C
Confidence 35667778888999999999999999999999999998876532211 111211111111 11111 12 2
Q ss_pred CCccccCCCEEEEEeeeEE------------------CceEEeEEEEEEeCC
Q 016183 97 DETVLQEGDMIKIDLGCHI------------------DGFIAVVAHTHVLQD 130 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~------------------dGY~ad~aRT~~vG~ 130 (394)
++.+|++|.++.|+.+... +++..-+..|++|.+
T Consensus 195 ~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~ 246 (255)
T PRK12896 195 PNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTR 246 (255)
T ss_pred CCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcC
Confidence 4578999999999977742 345666889999964
No 50
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.92 E-value=0.033 Score=53.16 Aligned_cols=84 Identities=15% Similarity=0.236 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccc-cCcccc--ccccccccCCceecccCCCCCCCCCc
Q 016183 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIV-EGVLSH--QLKQFVIDGNKVVLSVSNPDTRVDDA 212 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~-~~~~GH--giG~~~~e~p~~I~~~~~~~~~~~~~ 212 (394)
.++.+.+.+++++++|..++|||++..||++++...+-++|+-+. .++.|. ++=..+.| .|-. +-| +.+
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNE---viCH----GIP-D~R 195 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNE---VICH----GIP-DSR 195 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhh---eeec----CCC-CcC
Confidence 456677788899999999999999999999999998888876432 122111 00001100 1100 011 457
Q ss_pred eeeCCcEEEEceeee
Q 016183 213 EFEENEVYAVDIVTS 227 (394)
Q Consensus 213 ~le~GmV~aIEp~is 227 (394)
.||.|..+.|++.++
T Consensus 196 pLedGDIvNiDVtvY 210 (369)
T KOG2738|consen 196 PLEDGDIVNIDVTVY 210 (369)
T ss_pred cCCCCCEEeEEEEEE
Confidence 999999999999997
No 51
>PRK12897 methionine aminopeptidase; Reviewed
Probab=95.89 E-value=0.072 Score=50.27 Aligned_cols=102 Identities=19% Similarity=0.255 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCCCCCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~P~~~~~ 98 (394)
..|++-+++..+++.+++.++||++..|+...+++.+.+.|-..+... ..+.+-++..+ .+.++.+. .++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~~~~-------~GHgiGl~~hE~P~i~~~~~~-~~~ 189 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVARDF-------TGHGIGKEIHEEPAIFHFGKQ-GQG 189 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccCCCe-------EECccCCcccCCCccCCCCCC-CCC
Confidence 456677888899999999999999999999999999988865432211 11221122211 11222211 234
Q ss_pred ccccCCCEEEEEeeeE-----------------ECc-eEEeEEEEEEeCC
Q 016183 99 TVLQEGDMIKIDLGCH-----------------IDG-FIAVVAHTHVLQD 130 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~-----------------~dG-Y~ad~aRT~~vG~ 130 (394)
..|++|.++.+.-|.. ++| +-.-+..|+.|.+
T Consensus 190 ~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 190 PELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 6899999999998887 355 6778889999863
No 52
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=95.66 E-value=0.2 Score=46.71 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cc-cCCCCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TL-CHFSPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~-~H~~P~~~~ 97 (394)
.+|++.+++.++.+.+++.++||++-.||.+.+++.+.+.|-..+... .++.+-....+ .+ .+..|. +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~-------~GHgiG~~~~e~p~~~~~~~~~--~ 179 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREF-------GGHGIGRKFHEEPQIPNYGRPG--T 179 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCc-------cccCCCCccccCCCcCCccCCC--C
Confidence 467788888999999999999999999999999999988865432111 11111111110 00 112232 4
Q ss_pred CccccCCCEEEEEeeeEE------------------CceEEeEEEEEEeCC
Q 016183 98 ETVLQEGDMIKIDLGCHI------------------DGFIAVVAHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~------------------dGY~ad~aRT~~vG~ 130 (394)
+.+|++|.++.++.+..+ +.+-.-+..|++|.+
T Consensus 180 ~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte 230 (238)
T cd01086 180 GPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITE 230 (238)
T ss_pred CCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcC
Confidence 688999999999988764 224555677999863
No 53
>PRK09795 aminopeptidase; Provisional
Probab=95.62 E-value=0.16 Score=50.74 Aligned_cols=105 Identities=19% Similarity=0.238 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCC
Q 016183 16 PEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLA 95 (394)
Q Consensus 16 ~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~ 95 (394)
+++.+.++++-+++.++.+.+++.++||++-.||.+.+.+.+.+.|-..|.. .+..+.+-+...+ .+...|.
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~------h~~GHgiGl~~he-~p~i~~~- 307 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFG------HNTGHAIGIEVHE-DPRFSPR- 307 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCC------CCCCccCCccccC-CCCcCCC-
Confidence 4444568889999999999999999999999999999999998876432110 1122222222211 1112232
Q ss_pred CCCccccCCCEEEEEeeeEECce-EEeEEEEEEeC
Q 016183 96 SDETVLQEGDMIKIDLGCHIDGF-IAVVAHTHVLQ 129 (394)
Q Consensus 96 ~~~~~L~~GDvV~iDlG~~~dGY-~ad~aRT~~vG 129 (394)
++.+|++|-++.|+-|..+.|+ -.-+..|++|.
T Consensus 308 -~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 308 -DTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred -CCCCcCCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 4588999999999999988765 34568889985
No 54
>PRK07281 methionine aminopeptidase; Reviewed
Probab=95.56 E-value=0.12 Score=50.04 Aligned_cols=100 Identities=13% Similarity=0.214 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCC-CCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHF-SPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~-~P~~~~ 97 (394)
..|++.+++.++++.+++.++||++..||...+.+.+.+.|-..|.. ..++.+-+...+ .+.++ .+ .+
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~-------~~GHGIGl~~hE~P~i~~~~~~--~~ 219 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRD-------LVGHGVGPTMHEEPMVPNYGTA--GR 219 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCC-------eeeeeCCCccCCCCcCCCcccC--CC
Confidence 46789999999999999999999999999999999988765432211 111222222221 12222 12 23
Q ss_pred CccccCCCEEEEEeeeEEC----------ce---------EEeEEEEEEeC
Q 016183 98 ETVLQEGDMIKIDLGCHID----------GF---------IAVVAHTHVLQ 129 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~d----------GY---------~ad~aRT~~vG 129 (394)
+.+|++|.++.|.-+.... || ..-+..|++|.
T Consensus 220 ~~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT 270 (286)
T PRK07281 220 GLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVIT 270 (286)
T ss_pred CCEECCCCEEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEe
Confidence 5789999999999988642 22 35678888885
No 55
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=95.39 E-value=0.1 Score=50.61 Aligned_cols=81 Identities=14% Similarity=0.188 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccccCccccccccccccCCceecc-cCCCCCCCCCcee
Q 016183 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLS-VSNPDTRVDDAEF 214 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~-~~~~~~~~~~~~l 214 (394)
..+++.+.+..+++++++.++||++..||...+++.+.+.|..+ ++..+....+ .+++ .|+ .+++..|
T Consensus 3 ~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~-----afp~~is~n~---~~~H~~p~---~~d~~~l 71 (291)
T cd01088 3 KYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP-----AFPVNLSINE---CAAHYTPN---AGDDTVL 71 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCceeccCC---EeeCCCCC---CCCCccc
Confidence 56778888999999999999999999999999999999988532 2222211111 1111 111 1245789
Q ss_pred eCCcEEEEceeee
Q 016183 215 EENEVYAVDIVTS 227 (394)
Q Consensus 215 e~GmV~aIEp~is 227 (394)
++|+++.||.++.
T Consensus 72 ~~GDvV~iD~G~~ 84 (291)
T cd01088 72 KEGDVVKLDFGAH 84 (291)
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999875
No 56
>PRK14575 putative peptidase; Provisional
Probab=95.30 E-value=0.19 Score=51.12 Aligned_cols=100 Identities=12% Similarity=0.160 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccc-hhhhhccccCcccceeecCCCcccCCCCC--CCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMY-KNVKKKIERGVAFPSCVSVNNTLCHFSPL--ASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f-~~~~~~~~~g~afp~~vs~n~~~~H~~P~--~~~ 97 (394)
..|++.+++.++.+.+++.++||++..||.+.+.+.+.+.|-..| ... ...|+.+++ +. |-.|. ..+
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~---~GHGiG~~l--g~-----~e~P~i~~~~ 355 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH---LGHGNGVFL--GL-----EESPFVSTHA 355 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC---CCCcccCCC--CC-----ccCCCCCCCC
Confidence 456788889999999999999999999999999999988765322 111 111222211 11 11121 123
Q ss_pred CccccCCCEEEEEeeeEECc-eEEeEEEEEEeCC
Q 016183 98 ETVLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG~ 130 (394)
+.+|++|-++.|..|....| +-.-+..|++|.+
T Consensus 356 ~~~Le~GMv~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 356 TESFTSGMVLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred CCCcCCCCEEEECCeeecCCCcEEEEEeEEEEcC
Confidence 57899999999999987655 3466889999963
No 57
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=95.30 E-value=0.22 Score=45.21 Aligned_cols=97 Identities=26% Similarity=0.361 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcc-cchhhhhccccCcccceeecCCCcccCCC-CC---C
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGN-MYKNVKKKIERGVAFPSCVSVNNTLCHFS-PL---A 95 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~-~f~~~~~~~~~g~afp~~vs~n~~~~H~~-P~---~ 95 (394)
..+++.+.+..+++.+++.++||++..||.+.+.+.+.+.|-. .+.. .+.+ .++. ..|.. |. .
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~-------~~GH--~iG~---~~~~~~P~i~~~ 170 (207)
T PF00557_consen 103 EQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPH-------GLGH--GIGL---EFHEPGPNIARP 170 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTS-------SSEE--EESS---SSSEEEEEESST
T ss_pred cccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeee-------cccc--cccc---cccccceeeecc
Confidence 3778888888999999999999999999999999999987641 1111 1111 1111 11111 21 2
Q ss_pred CCCccccCCCEEEEEeeeE-ECce-EEeEEEEEEeC
Q 016183 96 SDETVLQEGDMIKIDLGCH-IDGF-IAVVAHTHVLQ 129 (394)
Q Consensus 96 ~~~~~L~~GDvV~iDlG~~-~dGY-~ad~aRT~~vG 129 (394)
.++.+|++|-++.|+.+.. ..|+ -.-+..|++|.
T Consensus 171 ~~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~Vt 206 (207)
T PF00557_consen 171 GDDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVLVT 206 (207)
T ss_dssp TTSSB--TTBEEEEEEEEEEETTSEEEEEBEEEEEE
T ss_pred cccceecCCCceeEeeeEEccCCCcEEEEEEEEEEC
Confidence 2468999999999999876 5565 66777777763
No 58
>PRK15173 peptidase; Provisional
Probab=94.81 E-value=0.38 Score=47.39 Aligned_cols=100 Identities=12% Similarity=0.194 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccc-hhhhhccccCcccceeecCCCcccCCCCCC--C
Q 016183 20 TKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMY-KNVKKKIERGVAFPSCVSVNNTLCHFSPLA--S 96 (394)
Q Consensus 20 ~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f-~~~~~~~~~g~afp~~vs~n~~~~H~~P~~--~ 96 (394)
+..|++-+++.++++.+++.++||++..||...+.+.+.+.|...| ... ...|+.+. ++. |..|.. .
T Consensus 202 ~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~---~GHGiG~~--lg~-----~E~P~i~~~ 271 (323)
T PRK15173 202 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH---LGHGNGVF--LGL-----EESPFVSTH 271 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC---CCCcCCCC--CCc-----CCCCCCCCC
Confidence 3567788899999999999999999999999999999988764322 110 11122211 111 222221 2
Q ss_pred CCccccCCCEEEEEeeeEECce-EEeEEEEEEeC
Q 016183 97 DETVLQEGDMIKIDLGCHIDGF-IAVVAHTHVLQ 129 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY-~ad~aRT~~vG 129 (394)
++.+|++|-++.|..|....|. -.-+..|++|.
T Consensus 272 ~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 272 ATESFTSGMVLSLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred CCCccCCCCEEEECCEEEcCCCcEEEEeeEEEEc
Confidence 3578999999999998875543 35678999995
No 59
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=94.70 E-value=0.18 Score=47.77 Aligned_cols=86 Identities=15% Similarity=0.143 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccc-cCccc--cccccccccCCceecccCCCCCCCCCc
Q 016183 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIV-EGVLS--HQLKQFVIDGNKVVLSVSNPDTRVDDA 212 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~-~~~~G--HgiG~~~~e~p~~I~~~~~~~~~~~~~ 212 (394)
..+++-+.+.++++.+...++||++..||.+.+++++.+.|.-+. .++.| -.+...+.+- ... +.|.++.
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~--v~H-----giP~d~~ 85 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEV--VAH-----GIPGDKK 85 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhhe--eee-----cCCCCCc
Confidence 456666777788888889999999999999999999998765321 22222 1111111110 000 1222568
Q ss_pred eeeCCcEEEEceeeec
Q 016183 213 EFEENEVYAVDIVTST 228 (394)
Q Consensus 213 ~le~GmV~aIEp~is~ 228 (394)
+|++|.++.|+.++..
T Consensus 86 vlk~GDiv~IDvg~~~ 101 (255)
T COG0024 86 VLKEGDIVKIDVGAHI 101 (255)
T ss_pred ccCCCCEEEEEEEEEE
Confidence 9999999999999863
No 60
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=94.62 E-value=0.34 Score=45.11 Aligned_cols=99 Identities=16% Similarity=0.107 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCC-CCC
Q 016183 20 TKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLA-SDE 98 (394)
Q Consensus 20 ~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~-~~~ 98 (394)
...+++.+.+.++++.+++.++||++..||...+.+.+.+.|..++.... ..++.+ .+ ++.|.+ .-.
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~---~h~~g~--~~-------~~~~~~~~~~ 187 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVL---SHQLKR--VV-------SSGEGKAKLV 187 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCcc---ccCcCc--eE-------ecCCCCccch
Confidence 36778888889999999999999999999999999999998744332210 011112 11 111111 013
Q ss_pred ccccCCCEEEEEeeeEECc-eEEeEEEEEEeCC
Q 016183 99 TVLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQD 130 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG~ 130 (394)
..|++|-++.+..+...+| +.+-+..||+|.+
T Consensus 188 ~~l~~gmvf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 188 ECVKHGLLFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred hhccCCcccccceeEccCCCeEEEEEEEEEEcC
Confidence 5799999999999998877 8889999999963
No 61
>PRK08671 methionine aminopeptidase; Provisional
Probab=94.51 E-value=0.34 Score=47.00 Aligned_cols=98 Identities=19% Similarity=0.277 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCC-----C
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPL-----A 95 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~-----~ 95 (394)
..+.+.+.+.++++.+++.++||++..||.+.+++.+.+.|-..+.+. .++ |..-...|..|. .
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~-------~GH----giG~~~~he~p~ip~~~~ 170 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL-------TGH----GLERYELHAGPSIPNYDE 170 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC-------ccc----CcCCCcccCCCccCccCC
Confidence 456778888889999999999999999999999999998865432211 111 111111222211 1
Q ss_pred CCCccccCCCEEEEEeeeE-ECceEEeEEEEEEeC
Q 016183 96 SDETVLQEGDMIKIDLGCH-IDGFIAVVAHTHVLQ 129 (394)
Q Consensus 96 ~~~~~L~~GDvV~iDlG~~-~dGY~ad~aRT~~vG 129 (394)
.++.+|++|.++.|+..+. -.|+..+..+|-+..
T Consensus 171 ~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 171 GGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred CCCceeCCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 2357899999999997754 377888877776664
No 62
>PRK14576 putative endopeptidase; Provisional
Probab=94.43 E-value=0.53 Score=47.83 Aligned_cols=103 Identities=12% Similarity=0.139 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccch-hhhhccccCcccceeecCCCcccCCCCCCCCC
Q 016183 20 TKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYK-NVKKKIERGVAFPSCVSVNNTLCHFSPLASDE 98 (394)
Q Consensus 20 ~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~-~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~ 98 (394)
+..+++-+++.++.+.++++++||++..||...+.+.+.+.|-..|. .. ...|+..+ ++..+ .+...|. ++
T Consensus 284 ~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~---~GHgiG~~--l~~~e-~P~i~~~--~~ 355 (405)
T PRK14576 284 KLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGH---LGHGDGVF--LGLEE-VPFVSTQ--AT 355 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC---CCCCCCCC--CCcCc-CCCcCCC--CC
Confidence 35677888899999999999999999999999999999887643221 10 00111111 12111 1122222 35
Q ss_pred ccccCCCEEEEEeeeEECc-eEEeEEEEEEeCC
Q 016183 99 TVLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQD 130 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG~ 130 (394)
.+|++|-++.++.|....| .-.-+..|++|.+
T Consensus 356 ~~Le~GMv~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 356 ETFCPGMVLSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred CccCCCCEEEECCceeecCCCEEEEeeEEEECC
Confidence 7899999999998776555 3445789999953
No 63
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=93.85 E-value=0.52 Score=47.67 Aligned_cols=104 Identities=12% Similarity=0.129 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee-cCCCcccCCCCC---CC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV-SVNNTLCHFSPL---AS 96 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v-s~n~~~~H~~P~---~~ 96 (394)
..+.+...+..+++.+++.++||++..||...+++.+.+.|..+..+. ...++.- -.+ +.-..+.++.+. ..
T Consensus 139 ~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G~~~v~~~---~gH~igr-~~~~g~~~Ii~~~~~~~~~~~ 214 (389)
T TIGR00495 139 RKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTPVEGM---LSHQLKQ-HVIDGEKVIISNPSDSQKKDH 214 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeecCCc---eeecccc-eeccCCCeeeecCCccccCCC
Confidence 455677778889999999999999999999999999999876544332 1111111 111 111223444321 11
Q ss_pred CCccccCCCEEEEEeeeEE-CceEEeEE-EEEEe
Q 016183 97 DETVLQEGDMIKIDLGCHI-DGFIAVVA-HTHVL 128 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~-dGY~ad~a-RT~~v 128 (394)
++..|++|+++.||..+.- .|+.-+.. ||-+.
T Consensus 215 ~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy 248 (389)
T TIGR00495 215 DTAEFEENEVYAVDILVSTGEGKAKDADQRTTIY 248 (389)
T ss_pred CCCEecCCCEEEEeeeecCCCceEEECCCeeEEE
Confidence 3468999999999988763 56665554 34333
No 64
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=93.62 E-value=0.54 Score=45.71 Aligned_cols=100 Identities=18% Similarity=0.283 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcc-cceeecCCCcccCCCCCCCCCcc
Q 016183 22 YKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVA-FPSCVSVNNTLCHFSPLASDETV 100 (394)
Q Consensus 22 ~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~a-fp~~vs~n~~~~H~~P~~~~~~~ 100 (394)
.+...+.+..+++.+++.++||++..||.+.+++.+.+.|-..+.+. ...++. |. +-..-.++...+ .++.+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~~~---~GHgig~~~--~h~g~~ip~i~~--~~~~~ 178 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPISNL---TGHSMAPYR--LHGGKSIPNVKE--RDTTK 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeecCC---CCcceeccc--ccCCCccCeecC--CCCCE
Confidence 46778888899999999999999999999999999998875543221 111111 10 000111122222 23578
Q ss_pred ccCCCEEEEEeeeE-ECceEEeEEEEEEe
Q 016183 101 LQEGDMIKIDLGCH-IDGFIAVVAHTHVL 128 (394)
Q Consensus 101 L~~GDvV~iDlG~~-~dGY~ad~aRT~~v 128 (394)
|++|+++.|+.+.. -.|+..+..+|-+.
T Consensus 179 le~GmV~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 179 LEEGDVVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred eCCCCEEEEceeEECCcCeEecCCCeEEE
Confidence 99999999997654 35777666655444
No 65
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=93.42 E-value=0.84 Score=45.91 Aligned_cols=100 Identities=19% Similarity=0.260 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCCcccCCCC---CCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNNTLCHFSP---LAS 96 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~~P---~~~ 96 (394)
..|+.-.++.++.++++++++||++-.++...+.+.|.+.|... |... ...|+.++..+ |-.| .+.
T Consensus 263 ~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h~---~GHgvG~~l~v-------hE~p~~~~~~ 332 (384)
T COG0006 263 EQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLHG---TGHGVGFVLDV-------HEHPQYLSPG 332 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccCC---ccccCCCCccc-------CcCccccCCC
Confidence 45677889999999999999999999999999999999875443 2221 12233333333 2223 112
Q ss_pred CCccccCCCEEEEEeeeEE-CceEEeEEEEEEeCC
Q 016183 97 DETVLQEGDMIKIDLGCHI-DGFIAVVAHTHVLQD 130 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~-dGY~ad~aRT~~vG~ 130 (394)
.+..|++|-++.++.|..+ +++-.-+..+++|.+
T Consensus 333 ~~~~L~~GMv~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 333 SDTTLEPGMVFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred CCccccCCcEEEeccccccCCCceEEEEEEEEEcC
Confidence 4688999999999999765 458888999999964
No 66
>PRK10879 proline aminopeptidase P II; Provisional
Probab=91.79 E-value=2.1 Score=44.08 Aligned_cols=107 Identities=13% Similarity=0.155 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-c-hhh-----hhccccCcccceee--cCCCcccCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-Y-KNV-----KKKIERGVAFPSCV--SVNNTLCHF 91 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f-~~~-----~~~~~~g~afp~~v--s~n~~~~H~ 91 (394)
..|++-+++.++.+.+++.++||++..+|...+.+.+.+...+. + ++. ...+. +.-|+-.+ +.. .-.|-
T Consensus 283 ~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~-~~~~~Hg~GH~iG-ldvHd 360 (438)
T PRK10879 283 AQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAH-RPFFMHGLSHWLG-LDVHD 360 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccC-ccccCCCCccccC-cCcCc
Confidence 35677778888999999999999999999998887765432110 0 000 00011 11122111 111 11232
Q ss_pred CCCC--CCCccccCCCEEEEEeeeEEC----------ceEEeEEEEEEeC
Q 016183 92 SPLA--SDETVLQEGDMIKIDLGCHID----------GFIAVVAHTHVLQ 129 (394)
Q Consensus 92 ~P~~--~~~~~L~~GDvV~iDlG~~~d----------GY~ad~aRT~~vG 129 (394)
.|.. .++++|++|-++.|.-|..+. |+-.-+..|++|.
T Consensus 361 ~~~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 361 VGVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred CCCcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 2321 245899999999999998763 4666788899996
No 67
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=91.54 E-value=1.3 Score=45.74 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhc----ccchhhhhccccCcccceeecCCCcccCC---CC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTG----NMYKNVKKKIERGVAFPSCVSVNNTLCHF---SP 93 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~----~~f~~~~~~~~~g~afp~~vs~n~~~~H~---~P 93 (394)
.++...+++.+|+..+++.++||++..||...+++.|.+.|- +.|.-. .+..-+.-++.-...|. .|
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k------~I~nltGHgIG~y~iHe~k~iP 337 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIK------SIRNLNGHSIGPYIIHGGKSVP 337 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccc------cccCCcccCCCCccccCCCcCC
Confidence 567788889999999999999999999999999999998763 111000 00000111222223343 33
Q ss_pred CC--CCCccccCCCEEEEEeeeE-ECceEEeEEEEEEe
Q 016183 94 LA--SDETVLQEGDMIKIDLGCH-IDGFIAVVAHTHVL 128 (394)
Q Consensus 94 ~~--~~~~~L~~GDvV~iDlG~~-~dGY~ad~aRT~~v 128 (394)
.. .+...|++|+++.|+..+. -+||..+-.++-+.
T Consensus 338 ~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY 375 (470)
T PTZ00053 338 IVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHY 375 (470)
T ss_pred eeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceee
Confidence 21 2347899999999997654 57888886555554
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=84.78 E-value=20 Score=33.29 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHhc-cCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCC----CCC
Q 016183 22 YKSAAEIANKALQLVVSEC-KPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSP----LAS 96 (394)
Q Consensus 22 ~R~Aa~Ia~~~l~~v~~~i-~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P----~~~ 96 (394)
.|++..++.++...++..+ +||+.-.+|.+.+.+.+.+.+.. |.. +..+.+-.+ .-.|-.| ...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h-------~~GHgIG~~---l~~hE~P~i~~~~~ 181 (224)
T cd01085 113 QKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGH-------GTGHGVGSF---LNVHEGPQSISPAP 181 (224)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCC-------CCCCCCCCC---CcCCCCCCcCCcCC
Confidence 3444455556666666666 58999999999998887766531 211 111211100 0122222 112
Q ss_pred CCccccCCCEEEEEeeeEECc-eEEeEEEEEEeC
Q 016183 97 DETVLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQ 129 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG 129 (394)
++.+|++|.++.|.-+..+.| +-.-+..|++|.
T Consensus 182 ~~~~L~~GmvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 182 NNVPLKAGMILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CCCCcCCCCEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 457899999999999998765 456688899885
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=84.42 E-value=6.1 Score=40.69 Aligned_cols=38 Identities=26% Similarity=0.328 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH
Q 016183 22 YKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIRE 59 (394)
Q Consensus 22 ~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~ 59 (394)
.++.-+++.++.+.+++.++||++-.||...+.+.|.+
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~ 307 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAK 307 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHH
Confidence 44677888999999999999999999999998877754
No 70
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=81.28 E-value=7.3 Score=42.10 Aligned_cols=103 Identities=17% Similarity=0.331 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCCCcccCCCCCCCCC
Q 016183 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVNNTLCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n~~~~H~~P~~~~~ 98 (394)
.|..|-...-.+.++++..|+||....+|-..+..++....-..-.+. .+.++|.+.+ -.++.+. ..- ++
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~----~k~lG~~iGlEFREssl~i-naK---nd 329 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNF----TKNLGFGIGLEFRESSLVI-NAK---ND 329 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhh----hhhcccccceeeecccccc-ccc---ch
Confidence 355666677778889999999999999999999999987754321111 1122233333 1222221 111 36
Q ss_pred ccccCCCEEEEEeeeE-------ECceEEeEEEEEEeCCC
Q 016183 99 TVLQEGDMIKIDLGCH-------IDGFIAVVAHTHVLQDG 131 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~-------~dGY~ad~aRT~~vG~~ 131 (394)
++|+.|.+..|.+|.. -+-|.--++-|+.||+.
T Consensus 330 ~~lk~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~ 369 (960)
T KOG1189|consen 330 RVLKKGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGED 369 (960)
T ss_pred hhhccCcEEEEeeccccccCcccccchhhhccceeeecCC
Confidence 8999999999999973 24577778999999864
No 71
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=71.24 E-value=43 Score=32.57 Aligned_cols=111 Identities=15% Similarity=0.215 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHH----HCCCccccCcccccccccccc-CCceecccCCCCCCC
Q 016183 135 GRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAA----AHDCKIVEGVLSHQLKQFVID-GNKVVLSVSNPDTRV 209 (394)
Q Consensus 135 ~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~----~~G~~~~~~~~GHgiG~~~~e-~p~~I~~~~~~~~~~ 209 (394)
...++..++-+.+...+.+.++||++.-||.+.++...+ +.|...- .|..-|..+.. .-.+ -||. |
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG---i~FPtG~SlN~cAAHy---TpNa---G 156 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG---IGFPTGCSLNHCAAHY---TPNA---G 156 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc---ccCCCcccccchhhhc---CCCC---C
Confidence 445666666677778888899999999999887766554 4554321 12222222211 1111 1232 4
Q ss_pred CCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccccccccCchhHHH
Q 016183 210 DDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRF 261 (394)
Q Consensus 210 ~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~ 261 (394)
+..+|+.+.|.-|+-+... +|.+ .+.- .||- ++..|.-=+.++|.
T Consensus 157 d~tVLqydDV~KiDfGthi-~GrI--iDsA-FTv~---F~p~~d~Ll~Avre 201 (397)
T KOG2775|consen 157 DKTVLKYDDVMKIDFGTHI-DGRI--IDSA-FTVA---FNPKYDPLLAAVRE 201 (397)
T ss_pred CceeeeecceEEEeccccc-cCeE--eeee-eEEe---eCccccHHHHHHHH
Confidence 6799999999999987642 2333 3333 3332 46666655555553
No 72
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=68.49 E-value=17 Score=27.76 Aligned_cols=20 Identities=20% Similarity=0.381 Sum_probs=15.5
Q ss_pred ccCCCcHHHHHHHHHHHHHH
Q 016183 40 CKPGVKIVDLCEKGDSFIRE 59 (394)
Q Consensus 40 i~pG~te~el~~~~~~~i~~ 59 (394)
++.|.|..|+|..+..-|.+
T Consensus 21 L~~GaTV~D~a~~iH~di~~ 40 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVK 40 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHH
Confidence 46799999999988765544
No 73
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=61.35 E-value=59 Score=32.41 Aligned_cols=38 Identities=13% Similarity=0.195 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHH
Q 016183 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAA 173 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~ 173 (394)
..+..-+.+..++...+..+.||++..||...-...+.
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~ 60 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLIL 60 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHH
Confidence 45566677788888999999999999998655554443
No 74
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=51.43 E-value=32 Score=26.65 Aligned_cols=51 Identities=25% Similarity=0.304 Sum_probs=37.6
Q ss_pred ccccCCCEEEEEeeeEE-CceEEeEE------EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 016183 99 TVLQEGDMIKIDLGCHI-DGFIAVVA------HTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKK 160 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~-dGY~ad~a------RT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~ 160 (394)
+..+.||.|.|++-+.. +|-.-|.+ .+|.+|.+. ...+++.++..+++|-+
T Consensus 3 ~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~~-----------~i~g~e~al~~m~~Ge~ 60 (94)
T PF00254_consen 3 RTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSGQ-----------VIPGLEEALIGMKVGEK 60 (94)
T ss_dssp SSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSSS-----------SSHHHHHHHTTSBTTEE
T ss_pred ccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccCc-----------cccchhhhcccccCCCE
Confidence 56889999999999987 88777766 788888532 23366777777777743
No 75
>PF11434 CHIPS: Chemotaxis-inhibiting protein CHIPS; InterPro: IPR020986 Chemotaxis inhibitory protein (also knows as CHIPS) is a Staphylococcus aureus-secreted virulence factor that impairs the response of neutrophils and monocytes to FPR and C5a []. CHIPS has been shown to reduce neutrophil recruitment toward C5a in mouse models (its activity is more potent on human than on mouse cells). As such, its properties may make it a candidate new anti-inflammatory therapeutic compound []. CHIPS also plays an key role in bacterial invasion, by inhibiting FMLP- and C5a-induced calcium moblisation []. By influencing 2 related receptors with very different ligand specificities (C5aR and FPR), the protein has a unique role; nevertheless, neither the manner in which it binds such structurally different molecules nor how its expression is regulated are currently unknown []. The structure of a CHIPS fragment (residues 31-121) has been solved by NMR spectroscopy []. This fragment has the same activity in blocking the C5aR relative to full-length CHIPS, but lacks FPR antagonism []. The protein has a compact fold comprising 2 short alpha-helices packed onto a 4-stranded anti-parallel beta-sheet: strands-2 and -3 are joined by a loop with a well-defined conformation []. The protein shares a high degree of structural similarity with a number of proteins, including the C-terminal domain of staphylococcal superantigen-like proteins (SSLs) 5 and 7, staphyloccocal and streptococcal superantigens TSST-1 and SPE-C, and various domains of the staphylococcal extracellullar adherence protein (EAP) [].; PDB: 2K3U_A 1XEE_A.
Probab=38.54 E-value=27 Score=26.07 Aligned_cols=25 Identities=20% Similarity=0.143 Sum_probs=15.5
Q ss_pred ceeEEEEEEEEEcCCC--ceeecCCCC
Q 016183 310 DYVAHIKFTVLLMPNG--SDRITSHTL 334 (394)
Q Consensus 310 ~~~aq~e~Tvlvt~~G--~~~lT~~~~ 334 (394)
.-+||||-.|++|+|- ..+.-..|.
T Consensus 24 knsaqfekmviltenkgyytvylntpl 50 (91)
T PF11434_consen 24 KNSAQFEKMVILTENKGYYTVYLNTPL 50 (91)
T ss_dssp S-GCCEEEEEEEESTT-EEEEETTS--
T ss_pred cchhhheeEEEEEcCCceEEEEEcCcc
Confidence 3459999999999875 233334443
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=36.56 E-value=1.2e+02 Score=32.51 Aligned_cols=73 Identities=16% Similarity=0.272 Sum_probs=43.6
Q ss_pred HHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc----eeecCCCcccCCCCCCCCCccccCCCE
Q 016183 31 KALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP----SCVSVNNTLCHFSPLASDETVLQEGDM 106 (394)
Q Consensus 31 ~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp----~~vs~n~~~~H~~P~~~~~~~L~~GDv 106 (394)
..-+.+...|+||.+..+|...+..+|...+-.. +..|- ..++..-.-....-+..++|+|+.|++
T Consensus 309 ~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel----------~pnF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~ 378 (1001)
T COG5406 309 MLQKYILGLVRPGTDSGIIYSEAEKYISSNGPEL----------GPNFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCI 378 (1001)
T ss_pred HHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCcc----------CchHhhhhhhhccccccccccceeccCCceeccccE
Confidence 3446677799999999999999999998875432 11121 111111111111111123588888888
Q ss_pred EEEEeee
Q 016183 107 IKIDLGC 113 (394)
Q Consensus 107 V~iDlG~ 113 (394)
..|.+|.
T Consensus 379 fnis~gf 385 (1001)
T COG5406 379 FNISLGF 385 (1001)
T ss_pred EEEeecc
Confidence 8888863
No 77
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=35.50 E-value=3.2e+02 Score=24.81 Aligned_cols=74 Identities=18% Similarity=0.156 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCcee
Q 016183 135 GRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEF 214 (394)
Q Consensus 135 ~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~l 214 (394)
++++..-..+.+=+-+.++..-|..+..+..+.+++.+.+..- ..+..|.+|-- ++|. ..+ =
T Consensus 115 ~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk~---~~yy~q~~GAi-----RYVv-ad~---------g 176 (200)
T PF07305_consen 115 PEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGKG---SRYYSQTEGAI-----RYVV-ADN---------G 176 (200)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCCC---CcceeeccCce-----EEEE-ecC---------C
Confidence 5666666667777788889999999999999999998876543 23445555531 1111 111 1
Q ss_pred eCCcEEEEceee
Q 016183 215 EENEVYAVDIVT 226 (394)
Q Consensus 215 e~GmV~aIEp~i 226 (394)
+.|.+|+|||.=
T Consensus 177 ekglTFAVEPIK 188 (200)
T PF07305_consen 177 EKGLTFAVEPIK 188 (200)
T ss_pred CceeEEEeeeee
Confidence 348999999963
No 78
>PRK01490 tig trigger factor; Provisional
Probab=33.88 E-value=1.8e+02 Score=29.65 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=24.4
Q ss_pred CccccCCCEEEEEeeeEECceEEe----EEEEEEeCC
Q 016183 98 ETVLQEGDMIKIDLGCHIDGFIAV----VAHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dGY~ad----~aRT~~vG~ 130 (394)
++.++.||.|.+|+-...+|-.-+ -..++.+|.
T Consensus 155 ~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~~~lg~ 191 (435)
T PRK01490 155 ERPAENGDRVTIDFVGSIDGEEFEGGKAEDFSLELGS 191 (435)
T ss_pred cccCCCCCEEEEEEEEEECCEECcCCCCCceEEEEcC
Confidence 467899999999998888874433 236777775
No 79
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=33.58 E-value=71 Score=24.33 Aligned_cols=47 Identities=17% Similarity=0.270 Sum_probs=28.7
Q ss_pred ccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCCccccCCCEEEE
Q 016183 40 CKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKI 109 (394)
Q Consensus 40 i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~~L~~GDvV~i 109 (394)
++.|.|..++|..++.-+.+ ++.|....+ ..-. +.+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~---------------~F~~A~v~~-----~~~v---g~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEK---------------GFIEAVGGR-----RRLE---GKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHh---------------ccEEEEEcc-----CEEE---CCCEEecCCCEEEE
Confidence 45699999999887754432 222322222 1111 23678999999987
No 80
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=30.51 E-value=1.1e+02 Score=23.36 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=28.5
Q ss_pred ccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCCccccCCCEEEE
Q 016183 40 CKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKI 109 (394)
Q Consensus 40 i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~~L~~GDvV~i 109 (394)
++.|.|..|+|..++.-+... | .+. +...| ....+. +..|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~----f-----------~~A-i~~k~---~~~vg~---~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG----F-----------LHA-IDART---GRRVGE---DYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc----c-----------eee-EEeeC---CEEeCC---CcEecCCCEEEE
Confidence 456999999998876544322 1 111 11111 223343 678999999976
No 81
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=30.28 E-value=2.1e+02 Score=28.83 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=24.1
Q ss_pred CccccCCCEEEEEeeeEECceEEeE----EEEEEeCC
Q 016183 98 ETVLQEGDMIKIDLGCHIDGFIAVV----AHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dGY~ad~----aRT~~vG~ 130 (394)
++.++.||.|.+|+-...+|=..+. ..++.+|.
T Consensus 144 ~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~~~~lg~ 180 (408)
T TIGR00115 144 RRAAEKGDRVTIDFEGFIDGEAFEGGKAENFSLELGS 180 (408)
T ss_pred ccccCCCCEEEEEEEEEECCEECcCCCCCCeEEEECC
Confidence 3578999999999988777755433 24677774
No 82
>cd06396 PB1_NBR1 The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The NBR1 protein contains a type I PB1 domain.
Probab=28.97 E-value=55 Score=25.45 Aligned_cols=35 Identities=9% Similarity=0.147 Sum_probs=28.8
Q ss_pred HHHHHHHHhhCCCCccccccchhh------hhhhHHHHHHH
Q 016183 260 RFIFSEINQKFPIMPFTARALEEK------RARLGLVECVN 294 (394)
Q Consensus 260 r~~~~~i~~~~~~~pf~~r~~~~~------~~~~g~~e~~~ 294 (394)
..|..+|.+.|+.=||++.|.|+. ...+-+.||++
T Consensus 25 ~~L~~ev~~rf~l~~f~lKYlDde~e~v~lssd~eLeE~~r 65 (81)
T cd06396 25 ASVEAMVKVSFGLNDIQIKYVDEENEEVSVNSQGEYEEALK 65 (81)
T ss_pred HHHHHHHHHHhCCCcceeEEEcCCCCEEEEEchhhHHHHHH
Confidence 678999999999779999995432 56778899987
No 83
>PF07277 SapC: SapC; InterPro: IPR010836 This family contains a number of bacterial SapC proteins approximately 250 residues long. In Campylobacter fetus, SapC forms part of a paracrystalline surface layer (S-layer) that confers serum resistance [].
Probab=28.91 E-value=2e+02 Score=26.60 Aligned_cols=67 Identities=18% Similarity=0.337 Sum_probs=39.5
Q ss_pred eCCcEEEEc---eeeecCCCCCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHH
Q 016183 215 EENEVYAVD---IVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVE 291 (394)
Q Consensus 215 e~GmV~aIE---p~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e 291 (394)
+...++||| |.++..+|..-..++|..|=| ++...++|..+.. +....+-=+.+
T Consensus 97 ~~~~~v~iD~~s~~v~~~~G~~LFd~~G~~T~~-----------l~~~~~~L~~~~~------------~~~~T~~f~~~ 153 (221)
T PF07277_consen 97 EDQLVVCIDEDSPLVSEDEGEPLFDEDGEPTEY-----------LQQVLNFLQQYQQ------------GRQQTQAFIKA 153 (221)
T ss_pred CCceEEEEECCCCCcCCCCCccCcCCCCCcCHH-----------HHHHHHHHHHHHH------------HHHHHHHHHHH
Confidence 345677777 445544554433355544444 2334455555543 23345566899
Q ss_pred HHHCCCccccCee
Q 016183 292 CVNHELLQPYPVL 304 (394)
Q Consensus 292 ~~~~~ll~~y~v~ 304 (394)
+.+||||.|+.+-
T Consensus 154 L~~~~Ll~~~~l~ 166 (221)
T PF07277_consen 154 LAELGLLEPWTLT 166 (221)
T ss_pred HHHcCCCcccEEE
Confidence 9999999999543
No 84
>PRK10354 RNA chaperone/anti-terminator; Provisional
Probab=27.64 E-value=63 Score=24.09 Aligned_cols=48 Identities=23% Similarity=0.435 Sum_probs=32.6
Q ss_pred ccCcccceee-cCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceEE
Q 016183 73 ERGVAFPSCV-SVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 73 ~~g~afp~~v-s~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~a 120 (394)
.+|+.|-..- +..+...|.+...... +.|++||.|.+++...-+|..+
T Consensus 15 ~kGfGFI~~~~g~~dvfvH~s~l~~~g~~~l~~G~~V~f~~~~~~~G~~A 64 (70)
T PRK10354 15 DKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAA 64 (70)
T ss_pred CCCcEEEecCCCCccEEEEEeeccccCCCCCCCCCEEEEEEEECCCCcee
Confidence 3566663222 3456778887764333 6799999999999887777644
No 85
>COG5562 Phage envelope protein [General function prediction only]
Probab=25.99 E-value=2.8e+02 Score=23.76 Aligned_cols=57 Identities=16% Similarity=0.243 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeecCCCC
Q 016183 257 KASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITSHTL 334 (394)
Q Consensus 257 ~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~~~~ 334 (394)
..+.+.+..+.+.-+.+|| +.||.+|+... -+.+..+| -.++.-+.+|+..+++.|.
T Consensus 8 ~~a~~~aeqvR~~vnf~~f-------------~~elkr~~~~~--yiy~~at~------n~~iv~~~~~~Il~~g~k~ 64 (137)
T COG5562 8 QIAQKIAEQVRKDVNFFPF-------------LSELKRHNGVH--YIYYLATG------NQSIVTTSDGVILIKGVKK 64 (137)
T ss_pred HHHHHHHHHhccCCCCcHH-------------HHHHHhhCceE--EEEEEccC------ceEEEEecCCEEEeecccc
Confidence 3567788888888889998 57999998654 22234444 2356667777777777765
No 86
>PF00313 CSD: 'Cold-shock' DNA-binding domain; InterPro: IPR002059 When Escherichia coli is exposed to a temperature drop from 37 to 10 degrees centigrade, a 4-5 hour lag phase occurs, after which growth is resumed at a reduced rate []. During the lag phase, the expression of around 13 proteins, which contain specific DNA-binding regions [], is increased 2-10 fold. These so-called 'cold shock' proteins are thought to help the cell to survive in temperatures lower than optimum growth temperature, by contrast with heat shock proteins, which help the cell to survive in temperatures greater than the optimum, possibly by condensation of the chromosome and organisation of the prokaryotic nucleoid []. A conserved domain of about 70 amino acids has been found in prokaryotic and eukaryotic DNA-binding proteins [, , ]. This domain is known as the 'cold-shock domain' (CSD), part of which is highly similar [] to the RNP-1 RNA-binding motif.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1HZC_A 1I5F_A 1HZ9_B 1C9O_B 1HZB_B 1HZA_A 2HAX_B 2L15_A 2LSS_A 3I2Z_B ....
Probab=25.62 E-value=98 Score=22.34 Aligned_cols=48 Identities=25% Similarity=0.382 Sum_probs=30.6
Q ss_pred cCcccceeecCC-CcccCCCCCCCCC-ccccCCCEEEEEeeeEECceEEe
Q 016183 74 RGVAFPSCVSVN-NTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIAV 121 (394)
Q Consensus 74 ~g~afp~~vs~n-~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~ad 121 (394)
+|+.|-.+-..+ +...|.+-..... +.|+.||.|.+++...-.|+.|.
T Consensus 12 kgyGFI~~~~~~~diFfh~s~~~~~~~~~l~~G~~V~F~~~~~~~g~~A~ 61 (66)
T PF00313_consen 12 KGYGFITSDDGGEDIFFHISDLSGNGFRSLKEGDRVEFEVEEGKKGPQAV 61 (66)
T ss_dssp TTEEEEEETTSSSEEEEEGGGBCSSSSTS--TTSEEEEEEEECTTSEEEE
T ss_pred CCceEEEEcccceeEEeccccccccccccCCCCCEEEEEEEECCCCCEEE
Confidence 455564444433 5667776554344 68999999999998877777654
No 87
>PRK15463 cold shock-like protein CspF; Provisional
Probab=25.50 E-value=62 Score=24.24 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=32.8
Q ss_pred ccCcccceee-cCCCcccCCCCCCCC-CccccCCCEEEEEeeeEECceE
Q 016183 73 ERGVAFPSCV-SVNNTLCHFSPLASD-ETVLQEGDMIKIDLGCHIDGFI 119 (394)
Q Consensus 73 ~~g~afp~~v-s~n~~~~H~~P~~~~-~~~L~~GDvV~iDlG~~~dGY~ 119 (394)
.+|+.|-..- +..+...|.+..... .+.|++|+.|.+++.-.-+|+.
T Consensus 15 ~kGfGFI~~~~g~~DvFvH~sal~~~g~~~l~~G~~V~f~v~~~~~G~~ 63 (70)
T PRK15463 15 KSGKGLITPSDGRKDVQVHISALNLRDAEELTTGLRVEFCRINGLRGPT 63 (70)
T ss_pred CCceEEEecCCCCccEEEEehhhhhcCCCCCCCCCEEEEEEEECCCCce
Confidence 3566664333 356777898776432 4679999999999988777753
No 88
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=25.44 E-value=64 Score=26.63 Aligned_cols=42 Identities=10% Similarity=0.224 Sum_probs=32.0
Q ss_pred EEEEEEEEEcCCCceeec--CCCCccccCCCCCCcHHHHHHHHc
Q 016183 313 AHIKFTVLLMPNGSDRIT--SHTLQEIQSTKTIDDPEIKAWLAL 354 (394)
Q Consensus 313 aq~e~Tvlvt~~G~~~lT--~~~~~~~~s~~~~~d~e~~~ll~~ 354 (394)
=.|+|.|+|.++|..--- ......+-.++.+..||+..||..
T Consensus 17 k~f~~DIvi~~dG~v~rr~K~lskrK~GTSHkl~~eEle~~lee 60 (121)
T COG1504 17 KDFEHDIVIRPDGKVERREKELSKRKYGTSHKLALEELEELLEE 60 (121)
T ss_pred EeccccEEEecCCceehhhhhhhhhhcCcccccCHHHHHHHHhc
Confidence 478999999999953211 122367788999999999999984
No 89
>PRK09937 stationary phase/starvation inducible regulatory protein CspD; Provisional
Probab=24.48 E-value=75 Score=24.10 Aligned_cols=47 Identities=19% Similarity=0.338 Sum_probs=33.1
Q ss_pred ccCcccceee-cCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceE
Q 016183 73 ERGVAFPSCV-SVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFI 119 (394)
Q Consensus 73 ~~g~afp~~v-s~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~ 119 (394)
.+|+.|-+.- +..+...|.+....+. +.|++|+.|.+++.-.-+|..
T Consensus 12 ~KGfGFI~~~~gg~dVFvH~s~i~~~g~~~l~~G~~V~f~~~~~~~G~~ 60 (74)
T PRK09937 12 AKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNH 60 (74)
T ss_pred CCCeEEEeeCCCCccEEEEEeeccccCCCCCCCCCEEEEEEEECCCCce
Confidence 3566663222 4567778987764333 789999999999988777763
No 90
>PRK09890 cold shock protein CspG; Provisional
Probab=24.39 E-value=77 Score=23.66 Aligned_cols=47 Identities=21% Similarity=0.383 Sum_probs=32.0
Q ss_pred cCcccceee-cCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceEE
Q 016183 74 RGVAFPSCV-SVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 74 ~g~afp~~v-s~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~a 120 (394)
+|+.|-..- +..+...|.+....+. +.|++||.|.+++.---.|..+
T Consensus 16 kGfGFI~~~~g~~dvFvH~s~l~~~~~~~l~~G~~V~f~~~~~~~G~~A 64 (70)
T PRK09890 16 KGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAA 64 (70)
T ss_pred CCcEEEecCCCCceEEEEEeeeccCCCCCCCCCCEEEEEEEECCCCcee
Confidence 566664333 3456778887664333 6799999999998876667643
No 91
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=23.79 E-value=4.2e+02 Score=23.57 Aligned_cols=53 Identities=17% Similarity=0.293 Sum_probs=35.5
Q ss_pred CccccCCCEEEEEeeeE-ECceEEeEE-----EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 016183 98 ETVLQEGDMIKIDLGCH-IDGFIAVVA-----HTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKN 161 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~-~dGY~ad~a-----RT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~ 161 (394)
....+.||.|.+..-.. .+|-.-|.+ .+|.+|.+ ....+++.++..|++|-++
T Consensus 83 g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~~-----------~vi~Gl~e~L~~Mk~Ge~~ 141 (177)
T TIGR03516 83 GTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQQ-----------DLFSGLRDGLKLMKEGETA 141 (177)
T ss_pred CCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCCc-----------chhHHHHHHHcCCCCCCEE
Confidence 34567899999997554 577665555 36677631 1345677788888888654
No 92
>PF07808 RED_N: RED-like protein N-terminal region; InterPro: IPR012916 This domain contains sequences that are similar to the N-terminal region of Red protein (Q13123 from SWISSPROT). This and related proteins contain a RED repeat which consists of a number of RE and RD sequence elements []. The region in question has several conserved NLS sequences and a putative trimeric coiled-coil region [], suggesting that these proteins are expressed in the nucleus []. The function of Red protein is unknown, but efficient sequestration to nuclear bodies suggests that its expression may be tightly regulated, or that the protein self-aggregates extremely efficiently []. ; GO: 0005634 nucleus
Probab=23.53 E-value=55 Score=30.82 Aligned_cols=29 Identities=17% Similarity=0.305 Sum_probs=17.2
Q ss_pred CceeeCC-cEEEEceeeecCCCCCcccCCCceEEEe
Q 016183 211 DAEFEEN-EVYAVDIVTSTGDGKPKLLDEKQTTIYK 245 (394)
Q Consensus 211 ~~~le~G-mV~aIEp~is~g~g~~~~~~~~~~tv~~ 245 (394)
+..|.|| |.|.+|.--..+. .|-+|||++
T Consensus 164 nelF~pGRMaYvfdL~~e~~~------~DIPTTliR 193 (238)
T PF07808_consen 164 NELFLPGRMAYVFDLDDEYAE------SDIPTTLIR 193 (238)
T ss_pred ccccCCcceEEEEecCCCccc------ccCCCeeec
Confidence 3567888 9898885332211 233577774
No 93
>PRK13032 chemotaxis-inhibiting protein CHIPS; Reviewed
Probab=23.14 E-value=61 Score=26.32 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=29.7
Q ss_pred CCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCC--ceeecCCCC
Q 016183 270 FPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNG--SDRITSHTL 334 (394)
Q Consensus 270 ~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G--~~~lT~~~~ 334 (394)
-..+|-++--+||+ +...++.| + .-+||||-.|++|+|- ..+.-..|.
T Consensus 59 nsglpttlgklder-----lrnylkkg---------t---knsaqfekmviltenkgyytvylntpl 108 (149)
T PRK13032 59 NSGLPTTLGKLDER-----LRNYLKKG---------T---KNSAQFEKMVILTENKGYYTVYLNTPL 108 (149)
T ss_pred cCCCCchhHHHHHH-----HHHHHHhc---------c---cchhhhheeEEEecCCceEEEEecCcc
Confidence 36788887666654 33344443 3 3459999999999875 233334443
No 94
>cd03015 PRX_Typ2cys Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric
Probab=22.81 E-value=49 Score=28.92 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=30.7
Q ss_pred ccCeeeecCCceeEEE-----------EEEEEEcCCCceeecCCCCccccCCCCCCcHHHHHHHHc
Q 016183 300 PYPVLHEKPGDYVAHI-----------KFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLAL 354 (394)
Q Consensus 300 ~y~v~~~~~g~~~aq~-----------e~Tvlvt~~G~~~lT~~~~~~~~s~~~~~d~e~~~ll~~ 354 (394)
+||++.+.++...-+| -+|++|.++|..+.......-..+ +.++|+++|+.
T Consensus 94 ~f~~l~D~~~~~~~~~gv~~~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~----~~~~il~~l~~ 155 (173)
T cd03015 94 NFPLLADPKKKISRDYGVLDEEEGVALRGTFIIDPEGIIRHITVNDLPVGR----SVDETLRVLDA 155 (173)
T ss_pred ceeEEECCchhHHHHhCCccccCCceeeEEEEECCCCeEEEEEecCCCCCC----CHHHHHHHHHH
Confidence 6777776665433222 379999999987776543211111 23678888864
No 95
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=22.63 E-value=1.9e+02 Score=18.26 Aligned_cols=33 Identities=6% Similarity=-0.020 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH
Q 016183 25 AAEIANKALQLVVSECKPGVKIVDLCEKGDSFI 57 (394)
Q Consensus 25 Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i 57 (394)
.+.++..++..+...+....|+.+|...+++..
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C 35 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKAC 35 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHH
Confidence 356788899999999999999999998877654
No 96
>PRK09507 cspE cold shock protein CspE; Reviewed
Probab=21.58 E-value=88 Score=23.28 Aligned_cols=48 Identities=21% Similarity=0.413 Sum_probs=32.1
Q ss_pred ccCcccceee-cCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceEE
Q 016183 73 ERGVAFPSCV-SVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 73 ~~g~afp~~v-s~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~a 120 (394)
.+|+.|-..- +..+...|.+...... +.|++||.|.+++.-.-.|+.+
T Consensus 14 ~kGyGFI~~~~g~~dvfvH~s~l~~~g~~~l~~G~~V~f~~~~~~~G~~A 63 (69)
T PRK09507 14 SKGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 63 (69)
T ss_pred CCCcEEEecCCCCeeEEEEeecccccCCCCCCCCCEEEEEEEECCCCccc
Confidence 3566663222 3456778887664333 6799999999998877677633
No 97
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=20.74 E-value=5.1e+02 Score=26.59 Aligned_cols=88 Identities=23% Similarity=0.346 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHhccC--CCcHHHHHHHHHHHHHHhhccc--chhhhh-ccccCcccceeecCC-CcccCCCCCCCCCccc
Q 016183 28 IANKALQLVVSECKP--GVKIVDLCEKGDSFIREQTGNM--YKNVKK-KIERGVAFPSCVSVN-NTLCHFSPLASDETVL 101 (394)
Q Consensus 28 Ia~~~l~~v~~~i~p--G~te~el~~~~~~~i~~~g~~~--f~~~~~-~~~~g~afp~~vs~n-~~~~H~~P~~~~~~~L 101 (394)
..-++-+..+..|.+ |.|..+|-...-..|-+...+. -+.... ......-+|.-||-+ ....|-.|..+.+.+|
T Consensus 345 avL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r~~pL 424 (488)
T KOG2414|consen 345 AVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSRDIPL 424 (488)
T ss_pred HHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCCCccC
Confidence 344556677788888 9999888777655554332111 000000 000011145444311 1235777776678999
Q ss_pred cCCCEEEEEeeeEE
Q 016183 102 QEGDMIKIDLGCHI 115 (394)
Q Consensus 102 ~~GDvV~iDlG~~~ 115 (394)
++|-++.|.-|..+
T Consensus 425 ~pg~ViTIEPGvYI 438 (488)
T KOG2414|consen 425 QPGMVITIEPGVYI 438 (488)
T ss_pred CCCceEEecCceec
Confidence 99999999998865
No 98
>PF07315 DUF1462: Protein of unknown function (DUF1462); InterPro: IPR009190 There are currently no experimental data for members of this group of bacterial proteins or their homologues. A crystal structure of Q7A6J8 from SWISSPROT revealed a thioredoxin-like fold, its core consisting of three layers alpha/beta/alpha.; PDB: 1XG8_A.
Probab=20.71 E-value=2.4e+02 Score=22.47 Aligned_cols=55 Identities=22% Similarity=0.373 Sum_probs=28.5
Q ss_pred chhHHHHHH----HHHhhCCCCccccccch---h---hhhhhHHHHHHHCCCccccCeeeecCCceeE
Q 016183 256 MKASRFIFS----EINQKFPIMPFTARALE---E---KRARLGLVECVNHELLQPYPVLHEKPGDYVA 313 (394)
Q Consensus 256 ~~~~r~~~~----~i~~~~~~~pf~~r~~~---~---~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~a 313 (394)
+++|+..|. -+.+|||.-||+.+..| . ..-+-=+..+++-.+. || |+.-+|++|+
T Consensus 15 ~PsSkeTyeWL~aal~RKyp~~~f~~~YiDi~~p~~~~~~~~~a~~I~ede~f--YP-lV~i~~eiV~ 79 (93)
T PF07315_consen 15 APSSKETYEWLEAALKRKYPDQPFEFTYIDIENPPENDHDQQFAERILEDELF--YP-LVVINDEIVA 79 (93)
T ss_dssp S--HHHHHHHHHHHHHHH-TTS-EEEEEEETTT----HHHHHHHHHHHTTSS---SS-EEEETTEEEE
T ss_pred CCCchhHHHHHHHHHhCcCCCCceEEEEEecCCCCccHHHHHHHHHHHhcccc--cc-eEEECCEEEe
Confidence 467777665 56799999999999811 1 1112223334444444 33 4456776665
Done!