BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016185
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LT47|FIE_ARATH Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM
OS=Arabidopsis thaliana GN=FIE PE=1 SV=2
Length = 369
Score = 609 bits (1571), Expect = e-174, Method: Compositional matrix adjust.
Identities = 281/392 (71%), Positives = 327/392 (83%), Gaps = 25/392 (6%)
Query: 1 MARTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRV 60
M++ +G E +VGSLTPS K+ Y+VTN++QEGK+PLYAVVFNF+D+R+F+VF T GGNR+
Sbjct: 1 MSKITLGNESIVGSLTPSNKKSYKVTNRIQEGKKPLYAVVFNFLDARFFDVFVTAGGNRI 60
Query: 61 TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL 120
T+Y CL G I+ALQSY DEDKEESFYTVSWAC V+G P++ AGG+ GIIRVIDV++E +
Sbjct: 61 TLYNCLGDGAISALQSYADEDKEESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETI 120
Query: 121 HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRL 180
HKS VGHGDS+NEIRTQPLKP LV++ASK DESVRL
Sbjct: 121 HKSLVGHGDSVNEIRTQPLKPQLVITASK-------------------------DESVRL 155
Query: 181 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSF 240
WNV+TGICILIFAGAGGHR EVLSVDFHPSDIYR ASCGMD T+KIWSMKEFWTYVEKSF
Sbjct: 156 WNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKEFWTYVEKSF 215
Query: 241 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPG 300
TWTD PSKFPTK+VQFPVF AS+H+NYVDCNRW GDFILSKSVDNEI+LWEP++KE SPG
Sbjct: 216 TWTDDPSKFPTKFVQFPVFTASIHTNYVDCNRWFGDFILSKSVDNEILLWEPQLKENSPG 275
Query: 301 EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQ 360
EG +D+L +YPVP CDIWFIKFSCD H ++ AIGN+EGK++VW+L+S PPVLI +LSH Q
Sbjct: 276 EGASDVLLRYPVPMCDIWFIKFSCDLHLSSVAIGNQEGKVYVWDLKSCPPVLITKLSHNQ 335
Query: 361 SKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
SKS IRQTAMS DGSTIL+CCEDG IWRWD I
Sbjct: 336 SKSVIRQTAMSVDGSTILACCEDGTIWRWDVI 367
>sp|Q8VZY6|FIE2_MAIZE Polycomb group protein FIE2 OS=Zea mays GN=FIE2 PE=2 SV=1
Length = 379
Score = 602 bits (1552), Expect = e-171, Method: Compositional matrix adjust.
Identities = 292/389 (75%), Positives = 321/389 (82%), Gaps = 26/389 (6%)
Query: 5 AIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQ 64
+GCE GSL PS+KREY+ K EGKRPLYA+ FNF+D+RY++VFATVGGNRVT Y+
Sbjct: 9 GLGCEAAEGSLVPSRKREYKPCGKHTEGKRPLYAIGFNFMDARYYDVFATVGGNRVTTYR 68
Query: 65 CLEGGVIAALQSYVDEDKEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEKLHKS 123
CLE G A LQ+YVDEDK+ESFYT+SWA + VDG P LVA G NGIIRVI+ + EKL KS
Sbjct: 69 CLENGSFALLQAYVDEDKDESFYTLSWARDHVDGSPLLVAAGSNGIIRVINCATEKLAKS 128
Query: 124 FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183
FVGHGDSINEIRTQPLKPSL++SASK DESVRLWNV
Sbjct: 129 FVGHGDSINEIRTQPLKPSLIISASK-------------------------DESVRLWNV 163
Query: 184 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 243
TGICILIFAGAGGHRNEVLSVDFHPSDI R ASCGMDNTVKIWSMKEFW YV+KS++WT
Sbjct: 164 HTGICILIFAGAGGHRNEVLSVDFHPSDIERFASCGMDNTVKIWSMKEFWLYVDKSYSWT 223
Query: 244 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGT 303
DLPSKFPTKYVQFPV IA+VHSNYVDC RWLGDFILSKSVDNEIVLWEPK KEQSPGEG+
Sbjct: 224 DLPSKFPTKYVQFPVLIAAVHSNYVDCTRWLGDFILSKSVDNEIVLWEPKTKEQSPGEGS 283
Query: 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKS 363
DILQKYPVPECDIWFIKFSCDFH+N AIGNREGKI+VWE+QSSPPVLIARL + Q KS
Sbjct: 284 IDILQKYPVPECDIWFIKFSCDFHFNQLAIGNREGKIYVWEVQSSPPVLIARLYNQQCKS 343
Query: 364 PIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
PIRQTA+S+DGSTIL EDG IWRWD +
Sbjct: 344 PIRQTAVSFDGSTILGAGEDGTIWRWDEV 372
>sp|Q8VZY7|FIE1_MAIZE Polycomb group protein FIE1 OS=Zea mays GN=FIE1 PE=2 SV=1
Length = 461
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/393 (61%), Positives = 294/393 (74%), Gaps = 26/393 (6%)
Query: 1 MARTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRV 60
+ R +GCE + G L PS+KREY+ +K G P+YA+ FNFID RY++VFA N V
Sbjct: 63 VPRQGLGCEVVEGLLVPSRKREYKPNSKYTVGNHPIYAIGFNFIDMRYYDVFAIASCNSV 122
Query: 61 TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEK 119
+Y+CLE G LQ+YVDEDK+ESFYT+SW + VD P LVA G N IIRVI+ + EK
Sbjct: 123 IIYRCLENGGFGLLQNYVDEDKDESFYTLSWTIDQVDSSPLLVAAGSNRIIRVINCATEK 182
Query: 120 LHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVR 179
L KS VGHG SI+EIRT KPSL++SASK DES+R
Sbjct: 183 LDKSLVGHGGSIHEIRTHASKPSLIISASK-------------------------DESIR 217
Query: 180 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS 239
LWNV TGICIL+FAGAGGHR++VLSVDFHP+++ ASCGMDNTVKIWSMKEFW YVEKS
Sbjct: 218 LWNVHTGICILVFAGAGGHRHDVLSVDFHPTEVGIFASCGMDNTVKIWSMKEFWIYVEKS 277
Query: 240 FTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSP 299
++WT PSKFPT+ +QFPV A+VHS+YVDC RWLGDFILSKSV N ++LWEPK ++ P
Sbjct: 278 YSWTGHPSKFPTRNIQFPVLTAAVHSDYVDCTRWLGDFILSKSVKNAVLLWEPKPDKRRP 337
Query: 300 GEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA 359
GEG+ D+LQKYPVP+C +WF+KFSCDF+ N AIGN +G+I+VWE+QSSPPVLI RL +
Sbjct: 338 GEGSVDVLQKYPVPKCSLWFMKFSCDFYSNQMAIGNNKGEIYVWEVQSSPPVLIDRLCNQ 397
Query: 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
+ KSPIRQTA+S+DGSTIL +DGAIWRWD +
Sbjct: 398 ECKSPIRQTAVSFDGSTILGAADDGAIWRWDEV 430
>sp|Q921E6|EED_MOUSE Polycomb protein EED OS=Mus musculus GN=Eed PE=1 SV=1
Length = 441
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 228/393 (58%), Gaps = 51/393 (12%)
Query: 20 KREYRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 79 KYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 137
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 136 TQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA 195
P P+L++S SK D ++RLWN+QT + IF G
Sbjct: 198 FHPRDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGV 232
Query: 196 GGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--- 248
GHR+EVLS D+ D+ +I SCGMD+++K+W + K +++S+ + P+K
Sbjct: 233 EGHRDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNR 287
Query: 249 -FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGE 301
F ++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P KM++ P E
Sbjct: 288 PFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSE 347
Query: 302 GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHA 359
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P L+H
Sbjct: 348 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHH 407
Query: 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
+ + IRQT+ S D S +++ C+D +IWRWD +
Sbjct: 408 KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 440
>sp|O75530|EED_HUMAN Polycomb protein EED OS=Homo sapiens GN=EED PE=1 SV=2
Length = 441
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 228/393 (58%), Gaps = 51/393 (12%)
Query: 20 KREYRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 79 KYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 137
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 136 TQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA 195
P P+L++S SK D ++RLWN+QT + IF G
Sbjct: 198 FHPRDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGV 232
Query: 196 GGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--- 248
GHR+EVLS D+ D+ +I SCGMD+++K+W + K +++S+ + P+K
Sbjct: 233 EGHRDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNR 287
Query: 249 -FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGE 301
F ++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P KM++ P E
Sbjct: 288 PFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSE 347
Query: 302 GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHA 359
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P L+H
Sbjct: 348 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHH 407
Query: 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
+ + IRQT+ S D S +++ C+D +IWRWD +
Sbjct: 408 KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 440
>sp|Q3SZ25|EED_BOVIN Polycomb protein EED OS=Bos taurus GN=EED PE=2 SV=1
Length = 441
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 228/393 (58%), Gaps = 51/393 (12%)
Query: 20 KREYRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 79 KYSFKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 137
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 138 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 197
Query: 136 TQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA 195
P P+L++S SK D ++RLWN+QT + IF G
Sbjct: 198 FHPRDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGV 232
Query: 196 GGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--- 248
GHR+EVLS D+ D+ +I SCGMD+++K+W + K +++S+ + P+K
Sbjct: 233 EGHRDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYN--PNKTNR 287
Query: 249 -FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGE 301
F ++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P KM++ P E
Sbjct: 288 PFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSE 347
Query: 302 GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHA 359
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P L+H
Sbjct: 348 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHH 407
Query: 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
+ + IRQT+ S D S +++ C+D +IWRWD +
Sbjct: 408 KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 440
>sp|Q8UUP2|EEDA_XENLA Polycomb protein eed-A OS=Xenopus laevis GN=eed-a PE=1 SV=1
Length = 438
Score = 267 bits (683), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 227/390 (58%), Gaps = 51/390 (13%)
Query: 23 YRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQSYVD 79
++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQSYVD
Sbjct: 79 FKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGDIRLLQSYVD 137
Query: 80 EDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP 138
D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P
Sbjct: 138 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 197
Query: 139 LKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGH 198
P+L++S SK D ++RLWN+QT + IF G GH
Sbjct: 198 RDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGVEGH 232
Query: 199 RNEVLSVDFHPSDIY--RIASCGMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FP 250
R+EVLS D+ D+ +I SCGMD+++K+W + T +++S+ + PSK F
Sbjct: 233 RDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSLRMKTAIKESYEYN--PSKTNRPFV 287
Query: 251 TKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTA 304
++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P KM++ P E
Sbjct: 288 SQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNV 347
Query: 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSK 362
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L++ P L++ +
Sbjct: 348 TILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEAEDPHKAKCTTLTYPKCA 407
Query: 363 SPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
S +RQT+ S D S +++ C+D IWRWD +
Sbjct: 408 SAVRQTSFSRDSSILVAVCDDATIWRWDRL 437
>sp|Q5ZKH3|EED_CHICK Polycomb protein EED OS=Gallus gallus GN=EED PE=2 SV=1
Length = 446
Score = 267 bits (682), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 228/393 (58%), Gaps = 51/393 (12%)
Query: 20 KREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 84 KYSFKCVNSLKEDHGQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 142
Query: 77 YVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 143 YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELK 202
Query: 136 TQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA 195
P P+L++S SK D ++RLWN+QT + IF G
Sbjct: 203 FHPRDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGV 237
Query: 196 GGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--- 248
GHR+EVLS D+ D+ +I SCGMD+++K+W + K +++S+ + P+K
Sbjct: 238 EGHRDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSKRMINAIKESYEYN--PNKTNR 292
Query: 249 -FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGE 301
F ++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P KM++ P E
Sbjct: 293 PFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSE 352
Query: 302 GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHA 359
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P L+H
Sbjct: 353 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEIEDPHKAKCTTLTHP 412
Query: 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
+ + IRQT+ S D S +++ C+D +IWRWD +
Sbjct: 413 KCVAAIRQTSFSRDSSILIAVCDDASIWRWDRL 445
>sp|Q566T0|EED_DANRE Polycomb protein eed OS=Danio rerio GN=eed PE=2 SV=2
Length = 443
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 221/393 (56%), Gaps = 51/393 (12%)
Query: 20 KREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQS 76
K ++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQS
Sbjct: 81 KYSFKCVNSLKEDHGQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS 139
Query: 77 YVDEDKEESFYTVSWACNVDGI-PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIR 135
YVD D +E+FYT +W + P L G GIIR+I+ + K +VGHG++INE++
Sbjct: 140 YVDADADENFYTCAWTFDCSSSHPLLAVAGSRGIIRIINHITMQCVKHYVGHGNAINELK 199
Query: 136 TQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA 195
P P+L++S SK D ++RLWN+QT + IF G
Sbjct: 200 FHPRDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGV 234
Query: 196 GGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--- 248
GHR+EVLS DF D+ +I SCGMD+++K+W + + + S+ + PSK
Sbjct: 235 EGHRDEVLSADF---DLLGEKIMSCGMDHSLKLWRLDSERLQRAIRGSYEYN--PSKTNR 289
Query: 249 -FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS-----PGE 301
F ++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P E P E
Sbjct: 290 PFVSQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGRMEDDIDRIKPNE 349
Query: 302 GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHA 359
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P L+
Sbjct: 350 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTLP 409
Query: 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
+ S IRQT+ S D S +++ C+D +IWRWD +
Sbjct: 410 RCTSAIRQTSFSRDSSILIAVCDDASIWRWDRL 442
>sp|Q6AZS2|EEDB_XENLA Polycomb protein eed-B OS=Xenopus laevis GN=eed-b PE=1 SV=2
Length = 438
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/390 (38%), Positives = 225/390 (57%), Gaps = 51/390 (13%)
Query: 23 YRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQSYVD 79
++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQSYVD
Sbjct: 79 FKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGDIRLLQSYVD 137
Query: 80 EDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP 138
D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P
Sbjct: 138 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 197
Query: 139 LKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGH 198
P+L++S SK D ++RLWN+QT + IF G GH
Sbjct: 198 RDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGVEGH 232
Query: 199 RNEVLSVDFHPSDIY--RIASCGMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FP 250
R+EVLS D+ D+ +I SCGMD+++K+W + T +++S+ + P+K F
Sbjct: 233 RDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSLRMKTAIKESYDYN--PNKTNRPFV 287
Query: 251 TKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTA 304
++ V FP F +H NYVDC RWLGD ILSKS +N IV W+P KM++ E
Sbjct: 288 SQKVHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIEKIKASESNV 347
Query: 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSK 362
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P L++ +
Sbjct: 348 TILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYPKCA 407
Query: 363 SPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
S IRQT+ S D S +++ C+D IWRWD +
Sbjct: 408 SAIRQTSFSRDSSVLIAVCDDSTIWRWDRL 437
>sp|Q28DT7|EED_XENTR Polycomb protein eed OS=Xenopus tropicalis GN=eed PE=2 SV=1
Length = 438
Score = 262 bits (670), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 224/390 (57%), Gaps = 51/390 (13%)
Query: 23 YRVTNKLQEG-KRPLYAVVFNFIDSRYFN--VFATVGGNRVTVYQCLEGGVIAALQSYVD 79
++ N L+E +PL+ V FN+ S+ + VFATVG NRVT+Y+C G I LQSYVD
Sbjct: 79 FKCVNSLKEDHNQPLFGVQFNW-HSKEGDPLVFATVGSNRVTLYECHPQGEIRLLQSYVD 137
Query: 80 EDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP 138
D +E+FYT +W + + P L G GIIR+I+ + K +VGHG++INE++ P
Sbjct: 138 ADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 197
Query: 139 LKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGH 198
P+L++S SK D ++RLWN+QT + IF G GH
Sbjct: 198 RDPNLLLSVSK-------------------------DHALRLWNIQTDTLVAIFGGVEGH 232
Query: 199 RNEVLSVDFHPSDIY--RIASCGMDNTVKIWSMKEFW--TYVEKSFTWTDLPSK----FP 250
R+EVLS D+ D+ +I SCGMD+++K+W + T + +S+ + P+K F
Sbjct: 233 RDEVLSADY---DLLGEKIMSCGMDHSLKLWRINSLRMKTAIRESYEYN--PNKTNRPFV 287
Query: 251 TKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEP-KMKEQ----SPGEGTA 304
++ + FP F +H NYVDC RWLGD ILSKS +N IV W+P KM++ E
Sbjct: 288 SQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKASESNV 347
Query: 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSK 362
IL ++ +CDIW+++FS DF A+GN+ GK++VW+L+ P L++ +
Sbjct: 348 TILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTYPKCA 407
Query: 363 SPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
S IRQT+ S D S +++ C+D IWRWD +
Sbjct: 408 SAIRQTSFSRDSSILVAVCDDATIWRWDRL 437
>sp|Q24338|ESC_DROME Polycomb protein esc OS=Drosophila melanogaster GN=esc PE=1 SV=1
Length = 425
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/393 (36%), Positives = 214/393 (54%), Gaps = 41/393 (10%)
Query: 17 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAAL 74
P + Y+ ++E ++ V FN + VFAT G NRVTVY+C G + L
Sbjct: 56 PKSRAAYKYDTHVKENHGANIFGVAFNTLLGKDEPQVFATAGSNRVTVYECPRQGGMQLL 115
Query: 75 QSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
Y D D +E FYT +W+ ++ P L A G G+IRVIDV + +++GHG +INE
Sbjct: 116 HCYADPDPDEVFYTCAWSYDLKTSSPLLAAAGYRGVIRVIDVEQNEAVGNYIGHGQAINE 175
Query: 134 IRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFA 193
++ P K L++S SK D ++RLWN+Q+ +CI I
Sbjct: 176 LKFHPHKLQLLLSGSK-------------------------DHAIRLWNIQSHVCIAILG 210
Query: 194 GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK--EFWTYVEKSFTWTDLPSK--F 249
G GHR+EVLS+DF+ RI S GMD+++K+W + EF +E S T++ S F
Sbjct: 211 GVEGHRDEVLSIDFNMRGD-RIVSSGMDHSLKLWCLNTPEFHHKIELSNTFSQEKSTLPF 269
Query: 250 PTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS-----PGEGT 303
PT FP F +H NYVDC +W G+F+LSKS +N IV W+P QS P + +
Sbjct: 270 PTVTKHFPDFSTRDIHRNYVDCVQWFGNFVLSKSCENAIVCWKPGQLHQSFEQVKPSDSS 329
Query: 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQS 361
I+ ++ EC+IWF++F + A+GN++GK++VWEL S P + L +++S
Sbjct: 330 CTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQGKVYVWELDPSDPEGAHMTTLHNSRS 389
Query: 362 KSPIRQTAMSYDGSTILSCCEDGAIWRWDAIPT 394
+ +RQ A S D S ++ C+D +WRW+ T
Sbjct: 390 VATVRQIAFSRDASVLVYVCDDATVWRWNRRQT 422
>sp|Q26458|ESC_DROVI Polycomb protein esc OS=Drosophila virilis GN=esc PE=3 SV=1
Length = 425
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 212/389 (54%), Gaps = 41/389 (10%)
Query: 17 PSKKREYRVTNKLQEGKRP-LYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAAL 74
P Y+ ++E ++ V FN + VFAT G NR TVY+C G + L
Sbjct: 56 PKSGAAYKYDTHVKENHGANIFGVSFNTLLGKDEPQVFATAGSNRCTVYECPRKGGLTLL 115
Query: 75 QSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINE 133
Y D D +E FYT +W+ ++ P L A G G+IRVID+ + +++GHG +INE
Sbjct: 116 HCYADPDPDEVFYTCAWSYDLKTSAPLLAAAGYRGVIRVIDIEQNEAVDNYIGHGQAINE 175
Query: 134 IRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFA 193
++ P K L++S SK D ++RLWN+QT +CI IF
Sbjct: 176 LKFHPHKLQLLLSGSK-------------------------DHAIRLWNIQTHVCIAIFG 210
Query: 194 GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM--KEFWTYVEKSFTWTDLPSK--F 249
G GHR+EVLS+DF+ RI S GMD+++K+W + +EF +E S T++ S F
Sbjct: 211 GVEGHRDEVLSIDFNMRGD-RIVSSGMDHSLKLWCLNTQEFQHKIELSQTFSQEKSTLPF 269
Query: 250 PTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS-----PGEGT 303
PT FP F +H NYVDC +W G+F+LSKS +N IV W+P QS P + +
Sbjct: 270 PTITKHFPDFSTRDIHRNYVDCVQWFGNFVLSKSCENAIVCWKPGQLHQSFEQLKPSDSS 329
Query: 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQS 361
I+ ++ EC+IWF++F + A+GN++GK++VWE+ S P + L + +S
Sbjct: 330 CTIIAEFEYDECEIWFVRFGFNPWQKVIALGNQQGKVYVWEMDPSDPEGAHMTTLHNLRS 389
Query: 362 KSPIRQTAMSYDGSTILSCCEDGAIWRWD 390
+ +RQ A S D S ++ C+D +WRW+
Sbjct: 390 VATVRQIAFSRDASVLVYVCDDATVWRWN 418
>sp|O16023|ESC_MUSDO Polycomb protein esc OS=Musca domestica GN=esc PE=3 SV=1
Length = 428
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/394 (36%), Positives = 220/394 (55%), Gaps = 45/394 (11%)
Query: 14 SLTPSKKREYRVTNKLQEGK-RPLYAVVFNFIDSRYFN-VFATVGGNRVTVYQCLEGGVI 71
S + +K+ Y+ L+E + ++ V FN + + + VFAT G NR +Y+C G +
Sbjct: 54 SKSKAKRPAYKYDCHLKEDHGQAIFGVSFNHLLGKDQSMVFATAGSNRCNIYECPRKGGL 113
Query: 72 AALQSYVDEDKEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDS 130
+ Y D D +E FYT SW+ ++ P L G G+IRVID+ + ++VGHG +
Sbjct: 114 KLIMCYADPDPDEVFYTCSWSYDLKTSAPLLATAGYRGVIRVIDIHRNESVGNYVGHGQA 173
Query: 131 INEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICIL 190
INE++ P + +L++S SK D ++RLWN+QT +CI
Sbjct: 174 INELKFHPRQANLLLSGSK-------------------------DHAIRLWNIQTHVCIA 208
Query: 191 IFAGAGGHRNEVLSVDFHPSDIY--RIASCGMDNTVKIWSMK--EFWTYVEKSFTWTDLP 246
IF G GHR+EVLS+DF D+ RI S GMD+++K+W + EF +E S T+
Sbjct: 209 IFGGVEGHRDEVLSIDF---DLRGERIMSSGMDHSLKLWRIDTPEFKDKIEMSRTFNPNK 265
Query: 247 SK--FPTKYVQFPVF-IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS----- 298
S+ FPT FP F +H NYVDC +W GDF+LSKS +N IV W+P Q+
Sbjct: 266 SQLPFPTIMQHFPEFSTRDIHRNYVDCVQWFGDFVLSKSCENSIVCWKPGQLHQTLSQLK 325
Query: 299 PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARL 356
P + + I+ ++ EC+IWF++F + + A+GN+ GK++VWEL S P + L
Sbjct: 326 PNDPSCTIISEFNYDECEIWFVRFGFNPWHKIVALGNQYGKVYVWELDPSDPRHTHSSTL 385
Query: 357 SHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390
++ + S +RQTA S D + ++ C+DG +WRW+
Sbjct: 386 NNIRCTSIVRQTAFSRDATVLVWVCDDGTVWRWN 419
>sp|Q9GYS1|MES6_CAEEL Polycomb protein mes-6 OS=Caenorhabditis elegans GN=mes-6 PE=1 SV=2
Length = 459
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 181/453 (39%), Gaps = 109/453 (24%)
Query: 20 KREYRVTNKL-QEGKRPLYAVVFN---FIDSRYFNVFATVGGNRVTVYQC--------LE 67
KR + +T KL ++ K+ +Y FN ID ATVGG+ + +Y L+
Sbjct: 24 KRPFVLTAKLLEDQKKAIYGCAFNQYAGIDEE--QAVATVGGSFLHMYSVPIDINNIELQ 81
Query: 68 GGVIAALQSYVDEDKEESFYTVSWACNV-----DGIPF-LVAGGINGIIRVIDVSNEKLH 121
++EES +TV+W + D PF +V GG G I VID + KL
Sbjct: 82 WSCNFPTDKSSKVEREESLFTVTWCYDTYEAENDRNPFKVVTGGTLGHIYVIDYVSRKLS 141
Query: 122 KSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLW 181
G IN+IRT P +L+V AS D+S+R+
Sbjct: 142 NRLRSVGWEINDIRTCPANSNLIVCAS-------------------------SDQSIRIH 176
Query: 182 NVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW--SMKEFWTYVE-- 237
+++ C+++ G H +LSVD+ +D I SCG D+ + W S+K+ ++E
Sbjct: 177 HIRNEACLIVIGGLECHAGTILSVDW-STDGDFILSCGFDHQLMEWDLSVKQVKEHLERA 235
Query: 238 ---------------------------KSFTWTDLPSK------------FPTKYVQFPV 258
KS ++P K P P+
Sbjct: 236 CKALHQDKINVLTQSQDIPYVSKGTMRKSAVSRNIPDKEEDQLLELHRELIPRPSCLLPI 295
Query: 259 FIAS-----VHSNYVDCNRWL--GDFILSKSVDNE--IVLWE---PKMKEQSPGEGT--- 303
+ S +HS+YVDC R+L ++ LSK NE I W PK + ++ G
Sbjct: 296 YTPSSVSTDMHSDYVDCIRFLIGTNYALSKGCGNEKAIHFWRFGPPKGEVENRIHGNVLR 355
Query: 304 ----ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA 359
+ VP WFIKF+ D G G + ++L+++
Sbjct: 356 PKSCTTKFRTMNVPSGSAWFIKFAVDPRRRWLVCGGAGGSVMFFDLRNNEETNPTHTCSV 415
Query: 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
S++ +RQ + S G ++ ++G + R+D +
Sbjct: 416 GSRT-VRQASFSTCGRFLVLVTDEGFVCRFDRV 447
>sp|P69104|GBLP_TRYBR Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei rhodesiense PE=2 SV=1
Length = 318
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 42/241 (17%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWT 234
D S+RLWN+Q G C F GH +VLSV F P D +I S G DN +++W++K
Sbjct: 88 DHSLRLWNLQNGQCQYKFL---GHTKDVLSVAFSP-DNRQIVSGGRDNALRVWNVKGECM 143
Query: 235 YVEKSFTWTDLPS--KFPTKYVQFPVFIAS---------------------VHSNYVDCN 271
+ TD S +F + + PV ++ H+NYV
Sbjct: 144 HTLSRGAHTDWVSCVRF-SPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSV 202
Query: 272 RWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 331
D L S D + V ++ + + GE +++ P+ + I FS + ++ A
Sbjct: 203 TVSPDGSLCASSDKDGV---ARLWDLTKGEALSEMAAGAPINQ-----ICFSPNRYWMCA 254
Query: 332 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQT---AMSYDGSTILSCCEDGAIWR 388
A E I +++L++ ++ H SK + + A S DGST+ S D I
Sbjct: 255 AT---EKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLYSGYTDNVIRV 311
Query: 389 W 389
W
Sbjct: 312 W 312
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 29/132 (21%)
Query: 101 LVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+V+GG + +RV +V E +H S H D ++ +R P S +I+S
Sbjct: 124 IVSGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSP-------SLDAPVIVSG---- 172
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 219
G D V++W++ TG + GH N V SV P D AS
Sbjct: 173 -------------GWDNLVKVWDLATGRLVTDLK---GHTNYVTSVTVSP-DGSLCASSD 215
Query: 220 MDNTVKIWSMKE 231
D ++W + +
Sbjct: 216 KDGVARLWDLTK 227
>sp|P69103|GBLP_TRYBB Guanine nucleotide-binding protein subunit beta-like protein
OS=Trypanosoma brucei brucei PE=2 SV=1
Length = 318
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 42/241 (17%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWT 234
D S+RLWN+Q G C F GH +VLSV F P D +I S G DN +++W++K
Sbjct: 88 DHSLRLWNLQNGQCQYKFL---GHTKDVLSVAFSP-DNRQIVSGGRDNALRVWNVKGECM 143
Query: 235 YVEKSFTWTDLPS--KFPTKYVQFPVFIAS---------------------VHSNYVDCN 271
+ TD S +F + + PV ++ H+NYV
Sbjct: 144 HTLSRGAHTDWVSCVRF-SPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSV 202
Query: 272 RWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 331
D L S D + V ++ + + GE +++ P+ + I FS + ++ A
Sbjct: 203 TVSPDGSLCASSDKDGV---ARLWDLTKGEALSEMAAGAPINQ-----ICFSPNRYWMCA 254
Query: 332 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQT---AMSYDGSTILSCCEDGAIWR 388
A E I +++L++ ++ H SK + + A S DGST+ S D I
Sbjct: 255 AT---EKGIRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLYSGYTDNVIRV 311
Query: 389 W 389
W
Sbjct: 312 W 312
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 29/132 (21%)
Query: 101 LVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+V+GG + +RV +V E +H S H D ++ +R P S +I+S
Sbjct: 124 IVSGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSP-------SLDAPVIVSG---- 172
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 219
G D V++W++ TG + GH N V SV P D AS
Sbjct: 173 -------------GWDNLVKVWDLATGRLVTDLK---GHTNYVTSVTVSP-DGSLCASSD 215
Query: 220 MDNTVKIWSMKE 231
D ++W + +
Sbjct: 216 KDGVARLWDLTK 227
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 173 GQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 232
G DE+V+LW+V+ G+CI GH +EV SV FHP D +AS D T+K+W +++
Sbjct: 703 GADENVKLWSVRDGVCIKTLT---GHEHEVFSVAFHP-DGETLASASGDKTIKLWDIQD- 757
Query: 233 WTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLW 290
+ + H+++V C + G+ + S + D+ I LW
Sbjct: 758 ----------------------GTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLW 795
Query: 291 EPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP 350
+ L+ + + FS D A+ G+R KI+ + +
Sbjct: 796 DVSQ---------GKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYH---TGE 843
Query: 351 VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390
L + H S I A S D ++S D I WD
Sbjct: 844 CLKTYIGHTNSVYSI---AYSPDSKILVSGSGDRTIKLWD 880
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 231
D+SVRLW+ TG C+ I GH N V S F P+ IA+C D TVKIW ++
Sbjct: 1083 DQSVRLWDCCTGRCVGILR---GHSNRVYSAIFSPNGEI-IATCSTDQTVKIWDWQQ 1135
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWT 234
D VR+W V++G +LI GH N V V F P D +ASCG D VK+WS+++
Sbjct: 663 DCHVRVWEVKSGKLLLI---CRGHSNWVRFVVFSP-DGEILASCGADENVKLWSVRD--- 715
Query: 235 YVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKM 294
+ K T + + VF + H + G+ + S S D I LW+ +
Sbjct: 716 ---------GVCIKTLTGH-EHEVFSVAFHPD--------GETLASASGDKTIKLWDIQ- 756
Query: 295 KEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIA 354
+GT LQ + + FS D + A++ + I +W++ S L
Sbjct: 757 ------DGTC--LQTLTGHTDWVRCVAFSPDGNTLASSAADH--TIKLWDV-SQGKCLRT 805
Query: 355 RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390
SH +R A S DG T+ S D I W+
Sbjct: 806 LKSHT---GWVRSVAFSADGQTLASGSGDRTIKIWN 838
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 174 QDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 230
D++VR+W+V TG C I GH + V SV F P D +AS D TV+IW++K
Sbjct: 1166 HDQTVRIWDVNTGKCHHICI---GHTHLVSSVAFSP-DGEVVASGSQDQTVRIWNVK 1218
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKP 141
K + + S A + DG L +G + I++ + + K+++GH +S+ I P
Sbjct: 807 KSHTGWVRSVAFSADG-QTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSK 865
Query: 142 SLVVSASKVII----------ISSL----SLICLLLFI--RSNCLRVGQDESVRLWNVQT 185
LV + I I +L + +C + F V D+SVRLWN +T
Sbjct: 866 ILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRT 925
Query: 186 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIW 227
G C+ + G+ + L V F P D +AS D TVK+W
Sbjct: 926 GQCLKAWY---GNTDWALPVAFSP-DRQILASGSNDKTVKLW 963
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 57/147 (38%), Gaps = 33/147 (22%)
Query: 86 FYTVSWACNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 142
+ WA V P L +G + +++ D K S GH D I I P +
Sbjct: 933 YGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQT 992
Query: 143 LVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEV 202
L +++ D SVRLWN+ TG C I H + V
Sbjct: 993 LASAST--------------------------DSSVRLWNISTGQCFQILL---EHTDWV 1023
Query: 203 LSVDFHPSDIYRIASCGMDNTVKIWSM 229
+V FHP IA+ D TVK+W++
Sbjct: 1024 YAVVFHPQGKI-IATGSADCTVKLWNI 1049
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 229
D++V++W+ Q G C+ GH N V + F P D +AS D TV+IW +
Sbjct: 1125 DQTVKIWDWQQGKCLKTLT---GHTNWVFDIAFSP-DGKILASASHDQTVRIWDV 1175
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 26/93 (27%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
L + + +R+ DV+ K H +GH ++ + P +V S S
Sbjct: 1160 ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSP-DGEVVASGS----------- 1207
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIF 192
QD++VR+WNV+TG C+ I
Sbjct: 1208 --------------QDQTVRIWNVKTGECLQIL 1226
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 22/150 (14%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+VAG +G IRV D+ K+ ++ +GH +I + P S V S S I +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYG-SFVASGSLDTDIKLWDVR 135
Query: 160 ---CLLLFIRSN----CLR----------VGQDESVRLWNVQTGICILIFAGAGGHRNEV 202
C+ + CLR D +V+LW++ G + F GH V
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT---GHSGPV 192
Query: 203 LSVDFHPSDIYRIASCGMDNTVKIWSMKEF 232
V+FHPS+ Y +AS D T++ W +++F
Sbjct: 193 NVVEFHPSE-YLLASGSSDRTIRFWDLEKF 221
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 45/267 (16%)
Query: 52 FATVGGNRVT-VYQCLEGGVIAAL-QSYVDEDKEES------FYTVSWACNVDGIPFLVA 103
F G N+ T V+ G ++A L +E+K+++ Y S + DG L
Sbjct: 213 FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDG-KLLAT 271
Query: 104 GGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV-SASKVIIISSL--SLIC 160
G + +IR+ D+S +++ K GH I + P LV S + + I L S
Sbjct: 272 GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS 331
Query: 161 LLLFIRSNCLRVG------------QDESVRLWNVQTGICILIF----AGAGGHRNEVLS 204
L L I V D +VR+W+ TG + GH + V S
Sbjct: 332 LTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYS 391
Query: 205 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 264
V F ++ +IAS +D TVK+W ++ +D S Y+ F+ SV
Sbjct: 392 VAF-SNNGEQIASGSLDRTVKLWHLE----------GKSDKKSTCEVTYIGHKDFVLSV- 439
Query: 265 SNYVDCNRWLGDFILSKSVDNEIVLWE 291
C ++ILS S D ++ W+
Sbjct: 440 -----CCTPDNEYILSGSKDRGVIFWD 461
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 45/267 (16%)
Query: 52 FATVGGNRVT-VYQCLEGGVIAAL-QSYVDEDKEES------FYTVSWACNVDGIPFLVA 103
F G N+ T V+ G ++A L +E+K+++ Y S + DG L
Sbjct: 214 FIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDG-KLLAT 272
Query: 104 GGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV-SASKVIIISSL--SLIC 160
G + +IR+ D+S +++ K GH I + P LV S + + I L S
Sbjct: 273 GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCS 332
Query: 161 LLLFIRSNCLRVG------------QDESVRLWNVQTGICILIF----AGAGGHRNEVLS 204
L L I V D +VR+W+ TG + GH + V S
Sbjct: 333 LTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYS 392
Query: 205 VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 264
V F ++ +IAS +D TVK+W ++ +D S Y+ F+ SV
Sbjct: 393 VAF-SNNGEQIASGSLDRTVKLWHLE----------GKSDKKSTCEVTYIGHKDFVLSV- 440
Query: 265 SNYVDCNRWLGDFILSKSVDNEIVLWE 291
C ++ILS S D ++ W+
Sbjct: 441 -----CCTPDNEYILSGSKDRGVIFWD 462
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 36/217 (16%)
Query: 41 FNFIDSRYFNVFATV-----GGNRVTVYQCLEGGVIAAL------QSYVDEDKEESFYTV 89
F+ + F + +T G ++ + C E I L QS +ED + V
Sbjct: 6 LKFVQDKVFGLISTSNSILDGSGKLAITGCGERISIWDLRKQVLNQSLYEEDIKAE---V 62
Query: 90 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
+ C L +G +G IR+ +S+ +L F GH S+ + L +++VS SK
Sbjct: 63 TNVCLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRL-GNILVSGSK 121
Query: 150 --------VIIISSL--------SLICLLLFIRSNCL-RVGQDESVRLWNVQTGICILIF 192
+I S L + + L RSN L +D +++W+ +T CI
Sbjct: 122 DTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTI 181
Query: 193 AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 229
GHRN + +D +P D R+ SC DN ++ W +
Sbjct: 182 V---GHRNPIWGIDVNP-DETRLCSCTSDNQIRFWRI 214
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIII------- 153
+VAG ++G +R+ D+ K+ ++ +GH SI+ + P+ L + I
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRK 137
Query: 154 --------SSLSLICLLLFIRSNCLRVGQDES-VRLWNVQTGICILIFAGAGGHRNEVLS 204
+ ++ CL L D+S V+LW++ G I F H + V
Sbjct: 138 GCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFT---SHTSAVNV 194
Query: 205 VDFHPSDIYRIASCGMDNTVKIWSMKEF 232
V FHP++ Y +AS D TVK+W +++F
Sbjct: 195 VQFHPNE-YLLASGSADRTVKLWDLEKF 221
>sp|Q6H8D5|COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica
GN=Os02g0209100 PE=2 SV=1
Length = 910
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 30/131 (22%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
++VAG + IRV + + K F H D I + P +P ++ S+ ++I
Sbjct: 71 WIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLI------- 123
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
+LW+ G +C IF G H + V+ V F+P D AS
Sbjct: 124 -------------------KLWDWDKGWMCTQIFEG---HSHYVMQVTFNPKDTNTFASA 161
Query: 219 GMDNTVKIWSM 229
+D TVK+WS+
Sbjct: 162 SLDRTVKVWSL 172
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 134/327 (40%), Gaps = 65/327 (19%)
Query: 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS 142
E++ Y+VS++ + I +GG + I++ S+ L K+ GH ++N + P +
Sbjct: 1113 EDAVYSVSFSPDGQTI---ASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKN 1169
Query: 143 LVVSAS----KVIIISSLSLICLLLFIRSNCLRV------------GQDESVRLWNVQTG 186
L ++S K+ +S L+ L + + V +D++V+LW+ Q G
Sbjct: 1170 LASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDG 1229
Query: 187 ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLP 246
+ GH++ V S+ F P D +AS D T+K+W + +
Sbjct: 1230 KLLKTL---NGHQDWVNSLSFSP-DGKTLASASADKTIKLWRIAD--------------- 1270
Query: 247 SKFPTKYVQFPVFIASVHSNYV-DCN-RWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTA 304
K V+ H++ V D N G I S S DN I LW E
Sbjct: 1271 ----GKLVK----TLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIE-------- 1314
Query: 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSP 364
L+ + ++ + F D + A+A + + I +W+ P LI+ L S
Sbjct: 1315 --LETFTGHSGGVYAVNFLPDSNIIASA--SLDNTIRLWQ---RP--LISPLEVLAGNSG 1365
Query: 365 IRQTAMSYDGSTILSCCEDGAIWRWDA 391
+ + +DGS I + DG I W +
Sbjct: 1366 VYAVSFLHDGSIIATAGADGNIQLWHS 1392
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 55/246 (22%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE--- 231
D++V++W V+ G + G H NEV V+F P D +AS DNTVK+W++ +
Sbjct: 1425 DKTVKIWRVRDGKALKTLIG---HDNEVNKVNFSP-DGKTLASASRDNTVKLWNVSDGKF 1480
Query: 232 -----------FW------------TYVEKSFT-WTDLPSKFPTKYVQFPVFIASVHSNY 267
FW +K+ W + SV+ N
Sbjct: 1481 KKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNP 1540
Query: 268 VDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFH 327
G + S S D + LW +L + ++ FS D
Sbjct: 1541 D------GSMLASTSADKTVKLWRSH---------DGHLLHTFSGHSNVVYSSSFSPDGR 1585
Query: 328 YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA-- 385
Y A+A ++ KI W++ L+ L Q ++ + S DG T++S D
Sbjct: 1586 YIASASEDKTVKI--WQIDGH---LLTTL--PQHQAGVMSAIFSPDGKTLISGSLDTTTK 1638
Query: 386 IWRWDA 391
IWR+D+
Sbjct: 1639 IWRFDS 1644
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 33/215 (15%)
Query: 32 GKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVS 90
G + +Y + F + ++ A+ ++ V +++ +G + L + +E + +F
Sbjct: 1403 GNKAIYGISF----TPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNF---- 1454
Query: 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV-VSASK 149
+ DG L + + +++ +VS+ K K+ GH D + + P + SA K
Sbjct: 1455 ---SPDG-KTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADK 1510
Query: 150 VI---------IISSLSLICLLLFI------RSNCLRVGQDESVRLWNVQTGICILIFAG 194
I +I SL L++ S D++V+LW G + F+G
Sbjct: 1511 TIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSG 1570
Query: 195 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 229
H N V S F P Y IAS D TVKIW +
Sbjct: 1571 ---HSNVVYSSSFSPDGRY-IASASEDKTVKIWQI 1601
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 41/215 (19%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWT 234
D++++LW+ +F GH + V SV F P D IAS G D T+K+W +
Sbjct: 1093 DKTIKLWSRDG----RLFRTLNGHEDAVYSVSFSP-DGQTIASGGSDKTIKLWQTSD--G 1145
Query: 235 YVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKM 294
+ K+ T + +V++ Y + G + S S D+ I LW+
Sbjct: 1146 TLLKTITGHE----------------QTVNNVYFSPD---GKNLASASSDHSIKLWDTT- 1185
Query: 295 KEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIA 354
+ +L + ++FS D AA G+ + + +W Q L+
Sbjct: 1186 --------SGQLLMTLTGHSAGVITVRFSPDGQTIAA--GSEDKTVKLWHRQDGK--LLK 1233
Query: 355 RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRW 389
L+ Q + + S DG T+ S D I W
Sbjct: 1234 TLNGHQDW--VNSLSFSPDGKTLASASADKTIKLW 1266
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 172 VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 231
G D +++LW+ Q G + G + + F P IAS D TVKIW +++
Sbjct: 1381 AGADGNIQLWHSQDGSLLKTLPG----NKAIYGISFTPQGDL-IASANADKTVKIWRVRD 1435
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 160 CLLLFIRSNCLRVGQ-DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
C+ SN L G D++VRLW+ Q G + +F GHR VLS+ F P+ Y +AS
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT---GHRGPVLSLAFSPNGKY-LASA 486
Query: 219 GMDNTVKIWSMKEFWTYVE 237
G D +K+W + Y E
Sbjct: 487 GEDQRLKLWDLASGTLYKE 505
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 172 VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 231
G+D+ ++LW++ +G ++ GH + + S+ F P D IAS MDN+V++W ++
Sbjct: 486 AGEDQRLKLWDLASGT---LYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVWDIRN 541
Query: 232 FW 233
+
Sbjct: 542 TY 543
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 34/131 (25%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+L + G + +++ D+++ L+K GH D+I + P L+ SAS
Sbjct: 482 YLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSGLIASAS----------- 529
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG--------GHRNEVLSVDFHPSD 211
D SVR+W+++ C G+ G + VLSV F +
Sbjct: 530 --------------MDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACN 575
Query: 212 IYRIASCGMDN 222
+ + +N
Sbjct: 576 LLLVTGITQEN 586
>sp|Q6H8D6|COB23_ORYSJ Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica
GN=Os02g0209000 PE=3 SV=2
Length = 910
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 30/131 (22%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
++VAG + IRV + + K F H D I + P +P ++ S+ ++I
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLI------- 123
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
+LW+ G +C IF G H + V+ V F+P D AS
Sbjct: 124 -------------------KLWDWDKGWMCTQIFEG---HSHYVMQVTFNPKDTNTFASA 161
Query: 219 GMDNTVKIWSM 229
+D TVK+WS+
Sbjct: 162 SLDRTVKVWSL 172
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS---KV 150
N DG L +G + +R+ D+S+ K +F GH + +N + P S++ S S V
Sbjct: 1251 NPDG-SMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP-DGSMLASGSGDQTV 1308
Query: 151 IIISSLSLICLLLFI-------------RSNCLRVG-QDESVRLWNVQTGICILIFAGAG 196
+ S CL F L G D++VRLW++ +G C+ F
Sbjct: 1309 RLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFL--- 1365
Query: 197 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 229
GH N V SV F P D +AS D TV++WS+
Sbjct: 1366 GHTNWVGSVIFSP-DGAILASGSGDQTVRLWSI 1397
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 29/162 (17%)
Query: 90 SWACNV----DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 145
SW +V DG L +G + +R+ D+S+ + K+F GH + + P L
Sbjct: 907 SWVNSVGFSQDG-KMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLAS 965
Query: 146 SASKVII----ISSLSLICLLLF-------------IRSNCLRVGQ-DESVRLWNVQTGI 187
+S + ISS CL +F + + L G D++VRLW++ +
Sbjct: 966 GSSDQTVRLWDISSGE--CLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQ 1023
Query: 188 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 229
C IF GH + V SV F SD +AS D TV++W +
Sbjct: 1024 CFYIFQ---GHTSCVRSVVF-SSDGAMLASGSDDQTVRLWDI 1061
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV------------VSAS 148
L G + I+R+ D+S++K + GH + +N + P +L +S+S
Sbjct: 1131 LANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSS 1190
Query: 149 KVIII--SSLSLICLLLF--IRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLS 204
K + I S + ++F S D++VRLW + + C+ F GH + V S
Sbjct: 1191 KCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQ---GHTSWVNS 1247
Query: 205 VDFHPSDIYRIASCGMDNTVKIWSM 229
V F+P D +AS D TV++W +
Sbjct: 1248 VVFNP-DGSMLASGSSDKTVRLWDI 1271
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 89 VSWACNVDGIP---FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV 145
SW +V P L +G + +R+ +S+ + +F+GH + + + P L
Sbjct: 1326 TSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILAS 1385
Query: 146 -SASKVIIISSLSLICLLLFIRSNCLRVG---------------QDESVRLWNVQTGICI 189
S + + + S+S L ++ + VG D++VRLWN+ +G C+
Sbjct: 1386 GSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECL 1445
Query: 190 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 230
GH N V SV F SD +AS D T+K+W +K
Sbjct: 1446 YTLH---GHINSVRSVAF-SSDGLILASGSDDETIKLWDVK 1482
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 31/140 (22%)
Query: 90 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK 149
S A N+DG L G + +R+ D+S+ + F GH + S+V S+
Sbjct: 995 SVAFNLDG-SMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVR---------SVVFSSDG 1044
Query: 150 VIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP 209
++ S D++VRLW++ +G C+ GH + V SV F P
Sbjct: 1045 AMLASG-----------------SDDQTVRLWDISSGNCLYTLQ---GHTSCVRSVVFSP 1084
Query: 210 SDIYRIASCGMDNTVKIWSM 229
D +AS G D V++W +
Sbjct: 1085 -DGAMLASGGDDQIVRLWDI 1103
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 166 RSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVK 225
R+ L +D +VRLW++QT C++ G GH V F P Y + S G D +
Sbjct: 555 RNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSPYGYYFV-SGGHDRVAR 610
Query: 226 IWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV 283
+W+ + P+ I + H V+C R+ +++ + S
Sbjct: 611 LWATDHYQ-----------------------PLRIFAGHLADVNCTRFHPNSNYVATGSA 647
Query: 284 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVW 343
D + LW+ + ++ + + I + FS + + A G +G++ +W
Sbjct: 648 DRTVRLWDVL---------NGNCVRIFTGHKGPIHSLTFSPNGRF--LATGATDGRVLLW 696
Query: 344 ELQSSPPVLIARL-SHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
++ +++ L H + +R S DG + S D + WDAI
Sbjct: 697 DIGHG--LMVGELKGHTDTVCSLR---FSRDGEILASGSMDNTVRLWDAI 741
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 32/131 (24%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+ V+GG + + R+ + + + F GH +N R P
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHP--------------------- 637
Query: 160 CLLLFIRSNCLRVGQ-DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
SN + G D +VRLW+V G C+ IF GH+ + S+ F P+ + +A+
Sbjct: 638 ------NSNYVATGSADRTVRLWDVLNGNCVRIFT---GHKGPIHSLTFSPNGRF-LATG 687
Query: 219 GMDNTVKIWSM 229
D V +W +
Sbjct: 688 ATDGRVLLWDI 698
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 160 CLLLFIRSNCLRVGQ-DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
C+ SN L G D++VRLW+ Q G + +F GHR VLS+ F P+ Y +AS
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFT---GHRGPVLSLSFSPNGKY-LASA 486
Query: 219 GMDNTVKIWSM 229
G D +K+W +
Sbjct: 487 GEDQRLKLWDL 497
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 172 VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 230
G+D+ ++LW++ +G +F GH + + S+ F P D IAS MDN+V++W ++
Sbjct: 486 AGEDQRLKLWDLASGT---LFKELRGHTDSITSLAFSP-DSGLIASASMDNSVRVWDIR 540
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 34/131 (25%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+L + G + +++ D+++ L K GH DSI + P L+ SAS
Sbjct: 482 YLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASAS----------- 529
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG--------GHRNEVLSVDFHPSD 211
D SVR+W++++ C G+ G + VLSV F +
Sbjct: 530 --------------MDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACN 575
Query: 212 IYRIASCGMDN 222
+ + +N
Sbjct: 576 LLLVTGITQEN 586
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 93/230 (40%), Gaps = 46/230 (20%)
Query: 166 RSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVK 225
R+ L +D +VRLW++QT C++ G GH V F P Y + S G D +
Sbjct: 556 RNYLLSSSEDGTVRLWSLQTFTCLV---GYKGHNYPVWDTQFSPYGYYFV-SGGHDRVAR 611
Query: 226 IWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV 283
+W+ + P+ I + H V+C R+ +++ + S
Sbjct: 612 LWATDHYQ-----------------------PLRIFAGHLADVNCTRYHPNSNYVATGSA 648
Query: 284 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVW 343
D + LW+ + ++ + + I + FS + + A G +G++ +W
Sbjct: 649 DRTVRLWDVL---------NGNCVRIFTGHKGPIHSLTFSPNGRF--LATGATDGRVLLW 697
Query: 344 ELQSSPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392
++ +++ L H + +R S DG + S D + WDA+
Sbjct: 698 DIGHG--LMVGELKGHTDTVCSLR---FSRDGEILASGSMDNTVRLWDAV 742
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 32/131 (24%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+ V+GG + + R+ + + + F GH +N R P
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHP--------------------- 638
Query: 160 CLLLFIRSNCLRVGQ-DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
SN + G D +VRLW+V G C+ IF GH+ + S+ F P+ + +A+
Sbjct: 639 ------NSNYVATGSADRTVRLWDVLNGNCVRIFT---GHKGPIHSLTFSPNGRF-LATG 688
Query: 219 GMDNTVKIWSM 229
D V +W +
Sbjct: 689 ATDGRVLLWDI 699
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+ I +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 160 ---CLLLFIRSN----CLR----------VGQDESVRLWNVQTGICILIFAGAGGHRNEV 202
C+ + + CLR D +V+LW++ G + F GH V
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP---GHTGPV 192
Query: 203 LSVDFHPSDIYRIASCGMDNTVKIWSMKEF 232
V+FHP++ Y +AS D T++ W +++F
Sbjct: 193 NVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 57/226 (25%)
Query: 174 QDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 233
Q S+R+W+++ I GH+ + S+DFHP + +AS D +K+W ++
Sbjct: 83 QSGSIRVWDLEAA---KILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLWDIRRKG 138
Query: 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWE 291
VF HS V C R+ G ++ S + D+ + LW+
Sbjct: 139 C-----------------------VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 292 ---PKMKEQSPGE-GTADILQKYPVPECDIWFIKFSCDFHYNA--AAIGNREGKIFVWEL 345
KM + PG G ++++ FH N A G+ + I W+L
Sbjct: 176 LTAGKMMSEFPGHTGPVNVVE-----------------FHPNEYLLASGSSDRTIRFWDL 218
Query: 346 QSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG-AIWRWD 390
+ V P+R + DG + S C+D ++ W+
Sbjct: 219 EKFQVVSCIE----GEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
>sp|Q9Y6I7|WSB1_HUMAN WD repeat and SOCS box-containing protein 1 OS=Homo sapiens GN=WSB1
PE=1 SV=1
Length = 421
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 120/305 (39%), Gaps = 82/305 (26%)
Query: 100 FLVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158
L+A G+N G I++ DV KL + V H + + ++ P ++VSAS+
Sbjct: 141 LLLATGLNNGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASR--------- 191
Query: 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
D+++R+W+++ ++ GH+N V S F P D + S
Sbjct: 192 ----------------DKTLRVWDLKDDGNMMKV--LRGHQNWVYSCAFSP-DSSMLCSV 232
Query: 219 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN-RWLGDF 277
G V +W+M ++ T + K + H + V C+ G
Sbjct: 233 GASKAVFLWNMDKY-TMIRK---------------------LEGHHHDVVACDFSPDGAL 270
Query: 278 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY------PVP-----ECDIWF--IKFSC 324
+ + S D + +W+P DIL ++ P P D W + FS
Sbjct: 271 LATASYDTRVYIWDPH---------NGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSH 321
Query: 325 DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 384
D + A+ ++ + W + PV +A LS+ A S DGS + + DG
Sbjct: 322 DGLHVASLADDK--MVRFWRIDEDYPVQVAPLSNGLC------CAFSTDGSVLAAGTHDG 373
Query: 385 AIWRW 389
+++ W
Sbjct: 374 SVYFW 378
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 30/131 (22%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
++VAG + IRV + + K F H D I + P P ++ S+ ++I
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLI------- 123
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
+LW+ + G +C IF G H + V+ V F+P D AS
Sbjct: 124 -------------------KLWDWEKGWLCTQIFEG---HSHYVMQVTFNPKDTNTFASA 161
Query: 219 GMDNTVKIWSM 229
+D T+KIW++
Sbjct: 162 SLDRTIKIWNL 172
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 232
D + ++W+ QT C+ G H + V +V FHP ++ I + D TV+IW +
Sbjct: 208 DHTAKVWDYQTKSCVQTLEG---HTHNVSAVSFHP-ELPIIITGSEDGTVRIWHATTY 261
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
+VAG +G IRV D+ K+ ++ +GH +I + P V S S+ I +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG-EFVASGSQDTNIKLWDIR 135
Query: 160 ---CLLLFIRSN----CLR----------VGQDESVRLWNVQTGICILIFAGAGGHRNEV 202
C+ + + CLR D +V+LW++ G + F GH V
Sbjct: 136 RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFP---GHTGPV 192
Query: 203 LSVDFHPSDIYRIASCGMDNTVKIWSMKEF 232
V+FHP++ Y +AS D T++ W +++F
Sbjct: 193 NVVEFHPNE-YLLASGSSDRTIRFWDLEKF 221
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 57/226 (25%)
Query: 174 QDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 233
Q S+R+W+++ I GH+ + S+DFHP + +AS D +K+W ++
Sbjct: 83 QSGSIRVWDLEAA---KILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLWDIRRKG 138
Query: 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWE 291
VF HS V C R+ G ++ S + D+ + LW+
Sbjct: 139 C-----------------------VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 292 ---PKMKEQSPGE-GTADILQKYPVPECDIWFIKFSCDFHYNA--AAIGNREGKIFVWEL 345
KM + PG G ++++ FH N A G+ + I W+L
Sbjct: 176 LTAGKMMSEFPGHTGPVNVVE-----------------FHPNEYLLASGSSDRTIRFWDL 218
Query: 346 QSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG-AIWRWD 390
+ V P+R + DG + S C+D ++ W+
Sbjct: 219 EKFQVVSCIE----GEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
>sp|Q5VQ78|COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica
GN=Os06g0143900 PE=2 SV=1
Length = 907
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 30/131 (22%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
++VAG + IRV + + K F H D I + P P ++ S+ ++I
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLI------- 123
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
+LW+ G +C IF G H + V+ V F+P D AS
Sbjct: 124 -------------------KLWDWDKGWMCTQIFEG---HSHYVMQVTFNPKDTNTFASA 161
Query: 219 GMDNTVKIWSM 229
+D T KIWS+
Sbjct: 162 SLDRTTKIWSL 172
>sp|Q10281|GBLP_SCHPO Guanine nucleotide-binding protein subunit beta-like protein
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rkp1 PE=1 SV=3
Length = 314
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 26/132 (19%)
Query: 120 LHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI-------------------- 159
L + GH + + T P P +++S S+ I +L+
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 160 --CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIAS 217
C L F L D+++RLW+++ G C F GH ++VLSV P D ++ S
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFV---GHTSDVLSVSISP-DNRQVVS 122
Query: 218 CGMDNTVKIWSM 229
D T+KIW++
Sbjct: 123 GSRDKTIKIWNI 134
>sp|O54927|WSB1_MOUSE WD repeat and SOCS box-containing protein 1 OS=Mus musculus GN=Wsb1
PE=1 SV=1
Length = 421
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 119/301 (39%), Gaps = 74/301 (24%)
Query: 100 FLVAGGIN-GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158
L+A G+N G I++ DV KL + V H + + ++ P L+VSAS+
Sbjct: 141 LLLATGLNNGRIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASR--------- 191
Query: 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
D+++R+W+++ ++ A H+N V S F P D + S
Sbjct: 192 ----------------DKTLRVWDLKDDGNMVKVLRA--HQNWVYSCAFSP-DCSMLCSV 232
Query: 219 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN-RWLGDF 277
G V +W+M ++ T + K + H + V C+ G
Sbjct: 233 GASKAVFLWNMDKY-TMIRK---------------------LEGHHHDVVACDFSPDGAL 270
Query: 278 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP-------ECDIWF--IKFSCDFHY 328
+ + S D + +W+P G+ + +P P D W + FS D +
Sbjct: 271 LATASYDTRVYVWDPHN-----GDLLMEFGHLFPSPTPIFAGGANDRWVRAVSFSHDGLH 325
Query: 329 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 388
A+ ++ + W + PV +A LS+ A S DGS + + DG+++
Sbjct: 326 VASLADDK--MVRFWRIDEDCPVQVAPLSNGLC------CAFSTDGSVLAAGTHDGSVYF 377
Query: 389 W 389
W
Sbjct: 378 W 378
>sp|A8XZJ9|LIS1_CAEBR Lissencephaly-1 homolog OS=Caenorhabditis briggsae GN=lis-1 PE=3
SV=2
Length = 390
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 92/231 (39%), Gaps = 57/231 (24%)
Query: 107 NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVII-------------- 152
+ I+V D +L K+ GH D++N+I LV ++ + I
Sbjct: 127 DATIKVWDYETGQLEKTLKGHTDAVNDIAIDAAGKQLVSCSTDLTIKLWDFGQSYDCLKS 186
Query: 153 -------ISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSV 205
+SS++ + F+ L +D +++ W++ TG C+ F GH + V +
Sbjct: 187 LKGHEHTVSSVTFLPTGDFV----LSASRDHTIKQWDISTGYCVFTFR---GHNDWVRMI 239
Query: 206 DFHPSDIYRIASCGMDNTVKIWSM---KEFWTYVEKSFTWTDLPSKFPTKYVQFP----- 257
D AS +D TV +WS+ + W + S W+ + + ++ F
Sbjct: 240 RI-SHDGTLFASGSLDQTVSVWSLPRKQRNWYFEIMSMRWSVSKPEGNSTHILFSGSRDR 298
Query: 258 ------------VFIASVHSNYVDCNRWL-----GDFILSKSVDNEIVLWE 291
+F S H N+V R L G +++S + D + +WE
Sbjct: 299 SIKAWNISTGEVIFTLSAHENWV---RGLAFHPKGKYLVSVADDKMMRIWE 346
>sp|Q9C827|COB22_ARATH Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2
SV=1
Length = 926
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 30/131 (22%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
++VAG + IRV + + K F H D I + P P ++ S+ ++I
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLI------- 123
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
+LW+ + G C IF G H + V+ V F+P D AS
Sbjct: 124 -------------------KLWDWEKGWACTQIFEG---HSHYVMQVTFNPKDTNTFASA 161
Query: 219 GMDNTVKIWSM 229
+D T+KIW++
Sbjct: 162 SLDRTIKIWNL 172
>sp|Q9DAW6|PRP4_MOUSE U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4
PE=2 SV=1
Length = 521
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 30/121 (24%)
Query: 173 GQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 232
G D R+W+++TG CI+ GH E+ ++F P+ Y IA+ DNT K+W +++
Sbjct: 383 GLDAFGRVWDLRTGRCIMFLE---GHLKEIYGINFSPNG-YHIATGSGDNTCKVWDLRQ- 437
Query: 233 WTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW---LGDFILSKSVDNEIVL 289
+ V+ H N V ++ GDF+L+ + DN +
Sbjct: 438 ----------------------RRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKI 475
Query: 290 W 290
W
Sbjct: 476 W 476
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 52 FATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIR 111
F G NR + +E G + L +E Y S A + DG +L G + IR
Sbjct: 313 FLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDG-KYLATGVEDQQIR 371
Query: 112 VIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSA--------------SKVIIISSLS 157
+ D++ +++++ GH I + +LV + K+I+ +
Sbjct: 372 IWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDG 431
Query: 158 LICLLLFIRSNCLRVGQ-DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIA 216
+ ++ + G D+ +R+W + + GH V SV F P Y +
Sbjct: 432 VTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLH----GHEESVYSVAFSPDGKY-LV 486
Query: 217 SCGMDNTVKIWSMK 230
S +DNT+K+W ++
Sbjct: 487 SGSLDNTIKLWELQ 500
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 35/123 (28%)
Query: 174 QDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM--KE 231
+D+++R+W+V G+C+ + GH N V + FHP Y + S D T+++W + K
Sbjct: 317 RDKTIRVWDVGVGLCLFVLT---GHDNWVRELTFHPGGKY-LVSASDDKTIRVWDLRNKR 372
Query: 232 FWT--YVEKSF-TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIV 288
F Y + F T D K P +++S SVDN +
Sbjct: 373 FMKTLYAHQHFCTSVDFHKKLP--------------------------YVISGSVDNTVK 406
Query: 289 LWE 291
+WE
Sbjct: 407 VWE 409
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 23/148 (15%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIIS----S 155
+++ + +I++ D + +S GH S+ +I + L+ S S + I
Sbjct: 122 LMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIAFDS-QGKLLASCSADLSIKLWDFQ 180
Query: 156 LSLICLLLFIRSN--------------CLRVGQDESVRLWNVQTGICILIFAGAGGHRNE 201
S C+ + + L +D+++++W V TG C+ ++ GHR
Sbjct: 181 QSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATGYCVKTYS---GHREW 237
Query: 202 VLSVDFHPSDIYRIASCGMDNTVKIWSM 229
+ V H D ASC +D++++IWS+
Sbjct: 238 IRMVRVH-MDGNIFASCSIDHSIRIWSI 264
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 30/132 (22%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158
PFL +G + IRV DV GH + + E+ P LV SAS
Sbjct: 310 PFLASGSRDKTIRVWDVGVGLCLFVLTGHDNWVRELTFHPGGKYLV-SAS---------- 358
Query: 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
D+++R+W+++ + H++ SVDFH Y I S
Sbjct: 359 ---------------DDKTIRVWDLRNKRFMKTLYA---HQHFCTSVDFHKKLPYVI-SG 399
Query: 219 GMDNTVKIWSMK 230
+DNTVK+W +
Sbjct: 400 SVDNTVKVWECR 411
>sp|Q9C1X0|YN55_SCHPO Uncharacterized WD repeat-containing protein C713.05
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC713.05 PE=3 SV=1
Length = 297
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 170 LRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 229
L G + VRLWNV++G CI +A GH +E+L +D D + ASCG D +++W +
Sbjct: 30 LAAGNERVVRLWNVKSGACIHEYA---GHGHEILDLDL-VYDSTKFASCGGDKFIQVWDV 85
>sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1
SV=2
Length = 1216
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 30/131 (22%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158
P V+GG + I+V + N + + +GH D I ++ P +VSAS
Sbjct: 64 PLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP-WIVSAS---------- 112
Query: 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
D+++R+WN Q+ C+ + GH + V+ FHP + + S
Sbjct: 113 ---------------DDQTIRIWNWQSRTCVSVLT---GHNHYVMCASFHPKEDL-VVSA 153
Query: 219 GMDNTVKIWSM 229
+D TV++W +
Sbjct: 154 SLDQTVRVWDI 164
>sp|Q8L828|COB23_ARATH Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2
SV=1
Length = 909
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 30/131 (22%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159
++VAG + IRV + + K F H D I + P P ++ S+ ++I
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLI------- 123
Query: 160 CLLLFIRSNCLRVGQDESVRLWNVQTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
+LW+ + G C IF G H + V+ V F+P D AS
Sbjct: 124 -------------------KLWDWENGWACTQIFEG---HSHYVMQVVFNPKDTNTFASA 161
Query: 219 GMDNTVKIWSM 229
+D T+KIW++
Sbjct: 162 SLDRTIKIWNL 172
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 30/214 (14%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV-SASKVIIISSLSL 158
FL G + +IR+ D+ N K+ GH I + P LV S + + I L
Sbjct: 457 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 516
Query: 159 --ICLLLFIRSNCLRVG-------------QDESVRLWNVQTGICILIF----AGAGGHR 199
L L I V D +VR+W+ +TG + GH+
Sbjct: 517 GQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK 576
Query: 200 NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 259
+ V SV F D + S +D +VK+W+++ KS + T Y+ F
Sbjct: 577 DSVYSVVF-TRDGQSVVSGSLDRSVKLWNLQNANN---KSDSKTPNSGTCEVTYIGHKDF 632
Query: 260 IASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPK 293
+ SV + D ++ILS S D ++ W+ K
Sbjct: 633 VLSVATTQND------EYILSGSKDRGVLFWDKK 660
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 54/267 (20%)
Query: 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLV--------------- 144
FL + +++ ++S+ ++ GH +N+ S+V
Sbjct: 93 FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPT 152
Query: 145 VSASKVIIISSLSLICLLLFIRSNCLRVGQ-DESVRLWNVQTGICILIFAGAGGHRNEVL 203
V +K + + + C +S+ + G DESVR+W+V+TG+C+ H + V
Sbjct: 153 VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLP---AHSDPVS 209
Query: 204 SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 263
+V F+ D I S D V+IW K+ + P P +V+F
Sbjct: 210 AVSFN-RDGSLITSGSYDGLVRIWDTAN--GQCVKTLVDDENP---PVAFVKFSPN---- 259
Query: 264 HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 323
G +ILS ++DN + LW+ G L++Y E + + I F+
Sbjct: 260 -----------GKYILSSNLDNTLKLWD---------FGKGKTLKQYQGHENNKYCI-FA 298
Query: 324 CDFHYNAAA---IGNREGKIFVWELQS 347
+F G+ + KI+VW LQ+
Sbjct: 299 -NFSVTGGKWIISGSEDCKIYVWNLQT 324
>sp|A4REK3|SEC13_MAGO7 Protein transport protein SEC13 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=SEC13 PE=3 SV=3
Length = 289
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 117/283 (41%), Gaps = 43/283 (15%)
Query: 23 YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVD-ED 81
+R+T L+ + ++ V + +Y N+ A+ G + +GG A Q D
Sbjct: 33 HRLTETLKGHEGAVWCVAW--AHPKYGNILASSGYDGKVFIWREQGG---AWQKIFDFAL 87
Query: 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL-HKSFVGHGDSINEIRTQPLK 140
+ S VSW+ + G L +G + V++ + H++F+ HG +N + P
Sbjct: 88 HKASVNIVSWSPHESGC-LLACASSDGHVSVLEFKDNSFDHQTFLAHGQGVNSVSWAP-- 144
Query: 141 PSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG---G 197
+A II ++ + F+ G D ++++W+ G G
Sbjct: 145 ----STAPGSIISTNATPAAQRRFVTG-----GSDNTLKIWSWDAASAQYRCEEGGVLSG 195
Query: 198 HRNEVLSVDFHPSDIYR--IASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV- 254
H + VL VD+ P+ + + IAS D TV+IW+ + P + ++ +
Sbjct: 196 HTDWVLDVDWSPTVLQKSYIASASQDRTVRIWTSD------------SSNPGVWQSRVLK 243
Query: 255 QFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQ 297
+F + V + G+ + S DN++ LW+ +K +
Sbjct: 244 EFDTTVWRVSWSLS------GNVLAVSSGDNKVTLWKENLKGE 280
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Pongo abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160
+V+ + I+V D ++ GH DSI +I P S + AS S+ I
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSIQDI---PFDHSGKLLAS----CSADMTIK 175
Query: 161 LLLFIRSNCLRV-----------------------GQDESVRLWNVQTGICILIFAGAGG 197
L F C+R +D+++++W VQTG C+ F G
Sbjct: 176 LWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT---G 232
Query: 198 HRNEVLSVDFHPSDIYRIASCGMDNTVKIW 227
HR V V + D IASC D TV++W
Sbjct: 233 HREWVRMVRPN-QDGTLIASCSNDQTVRVW 261
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 170 LRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSM 229
L +D+++++W+V TG+C++ GH N V V FH + I SC D T+++W
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV---GHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDY 367
Query: 230 K 230
K
Sbjct: 368 K 368
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 30/132 (22%)
Query: 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158
PFL++G + I++ DVS + VGH + + + L S K I
Sbjct: 309 PFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGV--------LFHSGGKFI------- 353
Query: 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218
L D+++R+W+ + C+ H + V S+DFH + Y + +
Sbjct: 354 -----------LSCADDKTLRVWDYKNKRCMKTL---NAHEHFVTSLDFHKTAPY-VVTG 398
Query: 219 GMDNTVKIWSMK 230
+D TVK+W +
Sbjct: 399 SVDQTVKVWECR 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,188,628
Number of Sequences: 539616
Number of extensions: 6159278
Number of successful extensions: 18506
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 720
Number of HSP's that attempted gapping in prelim test: 15211
Number of HSP's gapped (non-prelim): 3358
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)