Query 016185
Match_columns 394
No_of_seqs 633 out of 1795
Neff 11.7
Searched_HMMs 29240
Date Mon Mar 25 09:20:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.4E-51 8.2E-56 364.3 35.4 287 26-392 101-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 3E-50 1E-54 345.2 39.4 293 26-392 25-320 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 2.5E-49 8.7E-54 342.8 39.7 289 21-390 43-340 (340)
4 2ynn_A Coatomer subunit beta'; 100.0 1.4E-48 4.6E-53 332.9 38.3 292 23-393 3-302 (304)
5 2pbi_B Guanine nucleotide-bind 100.0 5.4E-48 1.8E-52 336.0 39.6 290 22-390 53-354 (354)
6 3iz6_a 40S ribosomal protein R 100.0 2.4E-49 8.1E-54 348.2 29.5 301 21-393 54-375 (380)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-47 4E-52 333.0 39.2 313 22-393 4-335 (345)
8 4gqb_B Methylosome protein 50; 100.0 2.3E-48 7.9E-53 335.9 34.5 289 30-393 27-331 (344)
9 4g56_B MGC81050 protein; prote 100.0 1.8E-48 6.1E-53 339.3 30.5 290 30-393 39-343 (357)
10 3frx_A Guanine nucleotide-bind 100.0 3.7E-47 1.3E-51 326.1 37.3 294 21-393 5-317 (319)
11 2hes_X YDR267CP; beta-propelle 100.0 6.9E-47 2.4E-51 326.1 38.0 304 22-393 3-328 (330)
12 1nr0_A Actin interacting prote 100.0 2.6E-46 8.8E-51 348.7 42.6 339 4-392 163-610 (611)
13 4ery_A WD repeat-containing pr 100.0 2.1E-46 7.3E-51 321.0 38.7 293 20-392 10-311 (312)
14 3k26_A Polycomb protein EED; W 100.0 3.8E-47 1.3E-51 333.0 34.6 336 29-393 14-366 (366)
15 2xzm_R RACK1; ribosome, transl 100.0 2.4E-46 8.2E-51 324.7 38.5 298 21-393 9-340 (343)
16 1erj_A Transcriptional repress 100.0 4.7E-46 1.6E-50 328.7 38.6 304 31-393 62-389 (393)
17 1nr0_A Actin interacting prote 100.0 8.7E-46 3E-50 345.1 41.5 337 28-393 142-567 (611)
18 4aow_A Guanine nucleotide-bind 100.0 1.8E-44 6.1E-49 312.8 37.5 305 17-393 22-337 (340)
19 2ymu_A WD-40 repeat protein; u 100.0 5.4E-44 1.8E-48 332.0 42.5 323 4-390 236-577 (577)
20 2ymu_A WD-40 repeat protein; u 100.0 4.2E-44 1.4E-48 332.7 41.2 308 24-392 7-374 (577)
21 1r5m_A SIR4-interacting protei 100.0 1.9E-44 6.3E-49 322.2 37.1 314 30-392 42-424 (425)
22 2ynn_A Coatomer subunit beta'; 100.0 3.9E-43 1.3E-47 299.2 35.9 246 81-393 11-259 (304)
23 3dm0_A Maltose-binding peripla 100.0 1.7E-43 5.8E-48 334.9 36.9 296 22-393 371-693 (694)
24 3ow8_A WD repeat-containing pr 100.0 2.3E-43 7.7E-48 302.5 33.6 267 3-345 50-319 (321)
25 3zwl_B Eukaryotic translation 100.0 3.8E-42 1.3E-46 301.5 40.7 291 22-393 21-346 (369)
26 1gxr_A ESG1, transducin-like e 100.0 3.2E-42 1.1E-46 298.2 39.5 285 29-392 47-336 (337)
27 3ei3_B DNA damage-binding prot 100.0 2.1E-42 7.2E-47 304.8 36.8 305 21-394 61-383 (383)
28 3odt_A Protein DOA1; ubiquitin 100.0 7.9E-42 2.7E-46 292.7 38.4 286 20-393 5-296 (313)
29 3i2n_A WD repeat-containing pr 100.0 8.6E-43 3E-47 304.3 32.7 301 24-393 9-353 (357)
30 1k8k_C P40, ARP2/3 complex 41 100.0 2.2E-42 7.7E-47 303.4 35.5 306 29-393 4-361 (372)
31 1sq9_A Antiviral protein SKI8; 100.0 7.3E-43 2.5E-47 309.3 32.5 293 23-393 6-395 (397)
32 1vyh_C Platelet-activating fac 100.0 1.1E-42 3.8E-47 308.7 33.2 265 4-346 123-410 (410)
33 4gqb_B Methylosome protein 50; 100.0 2.2E-42 7.5E-47 298.5 32.6 249 31-348 80-332 (344)
34 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.1E-41 1.4E-45 302.5 41.9 310 22-393 107-442 (445)
35 2pm9_A Protein WEB1, protein t 100.0 2.1E-43 7.3E-48 314.7 24.2 316 8-394 42-415 (416)
36 1pgu_A Actin interacting prote 100.0 1.2E-40 4.3E-45 311.6 41.0 337 24-393 151-614 (615)
37 4aez_A CDC20, WD repeat-contai 100.0 6.2E-41 2.1E-45 297.0 36.0 282 30-393 88-380 (401)
38 2pm9_A Protein WEB1, protein t 100.0 2E-42 6.8E-47 308.4 25.5 289 32-393 11-337 (416)
39 3dwl_C Actin-related protein 2 100.0 1E-42 3.4E-47 306.3 22.8 306 29-391 7-377 (377)
40 2oaj_A Protein SNI1; WD40 repe 100.0 5.4E-40 1.9E-44 316.8 42.2 340 30-393 14-605 (902)
41 1got_B GT-beta; complex (GTP-b 100.0 3.1E-40 1.1E-44 285.8 36.5 243 81-393 53-301 (340)
42 4gga_A P55CDC, cell division c 100.0 3E-40 1E-44 294.4 37.3 281 35-393 107-395 (420)
43 4e54_B DNA damage-binding prot 100.0 7E-42 2.4E-46 306.2 26.6 308 22-393 108-430 (435)
44 3v7d_B Cell division control p 100.0 1.1E-39 3.9E-44 294.8 40.7 307 25-391 113-461 (464)
45 4ggc_A P55CDC, cell division c 100.0 9.2E-40 3.2E-44 280.5 37.5 282 36-393 28-315 (318)
46 3vl1_A 26S proteasome regulato 100.0 7.8E-40 2.7E-44 292.1 37.9 313 4-393 71-419 (420)
47 2pm7_B Protein transport prote 100.0 3.2E-40 1.1E-44 280.2 33.1 254 81-392 7-284 (297)
48 2hes_X YDR267CP; beta-propelle 100.0 3.9E-40 1.3E-44 283.9 33.7 280 3-347 26-328 (330)
49 4h5i_A Guanine nucleotide-exch 100.0 1.3E-40 4.4E-45 290.5 30.9 288 33-393 14-343 (365)
50 3fm0_A Protein CIAO1; WDR39,SG 100.0 6.9E-40 2.3E-44 284.1 35.1 296 3-349 30-337 (345)
51 1p22_A F-BOX/WD-repeat protein 100.0 3.9E-40 1.3E-44 295.1 34.5 277 30-393 130-414 (435)
52 3gre_A Serine/threonine-protei 100.0 1.2E-40 4E-45 298.9 30.5 300 23-390 52-437 (437)
53 3sfz_A APAF-1, apoptotic pepti 100.0 5.2E-40 1.8E-44 330.6 38.7 346 3-393 629-1034(1249)
54 2oaj_A Protein SNI1; WD40 repe 100.0 4.9E-40 1.7E-44 317.1 36.1 359 3-391 112-659 (902)
55 4g56_B MGC81050 protein; prote 100.0 2.1E-40 7.1E-45 288.4 30.3 254 26-348 87-344 (357)
56 3mkq_A Coatomer beta'-subunit; 100.0 9.5E-40 3.3E-44 315.4 37.5 292 23-393 3-302 (814)
57 3vl1_A 26S proteasome regulato 100.0 1.4E-40 4.7E-45 296.9 29.3 302 34-393 57-365 (420)
58 3sfz_A APAF-1, apoptotic pepti 100.0 2.9E-40 1E-44 332.4 33.9 337 4-393 716-1158(1249)
59 2j04_B YDR362CP, TAU91; beta p 100.0 6.8E-41 2.3E-45 303.2 26.0 293 32-393 132-517 (524)
60 2pbi_B Guanine nucleotide-bind 100.0 3.3E-39 1.1E-43 280.7 35.1 244 81-393 62-315 (354)
61 1gxr_A ESG1, transducin-like e 100.0 1.3E-39 4.5E-44 281.8 30.8 279 32-393 8-296 (337)
62 2pm7_B Protein transport prote 100.0 2.1E-39 7.3E-44 275.1 31.3 258 27-348 3-286 (297)
63 3bg1_A Protein SEC13 homolog; 100.0 4.8E-40 1.6E-44 281.6 27.0 257 28-347 8-293 (316)
64 4a11_B DNA excision repair pro 100.0 1.2E-38 4E-43 283.2 36.5 317 24-393 34-365 (408)
65 3iz6_a 40S ribosomal protein R 100.0 4.3E-40 1.5E-44 289.3 26.7 262 60-393 48-329 (380)
66 3frx_A Guanine nucleotide-bind 100.0 9.5E-39 3.2E-43 273.9 34.2 240 81-393 15-267 (319)
67 1pgu_A Actin interacting prote 100.0 6.1E-39 2.1E-43 300.2 35.4 301 31-391 16-364 (615)
68 3mmy_A MRNA export factor; mRN 100.0 4.4E-39 1.5E-43 281.9 31.7 298 17-390 23-343 (368)
69 3bg1_A Protein SEC13 homolog; 100.0 7.1E-40 2.4E-44 280.5 25.3 252 81-392 11-292 (316)
70 3dw8_B Serine/threonine-protei 100.0 4.9E-39 1.7E-43 289.3 31.5 289 32-392 27-445 (447)
71 4ery_A WD repeat-containing pr 100.0 2.1E-38 7.1E-43 271.4 33.5 267 3-346 37-311 (312)
72 1erj_A Transcriptional repress 100.0 3.3E-38 1.1E-42 278.6 35.6 255 35-348 125-390 (393)
73 1yfq_A Cell cycle arrest prote 100.0 2.4E-38 8.3E-43 274.5 31.9 282 26-385 4-315 (342)
74 2xzm_R RACK1; ribosome, transl 100.0 6.3E-38 2.2E-42 271.8 33.9 277 3-348 41-341 (343)
75 3jrp_A Fusion protein of prote 100.0 6E-38 2E-42 275.9 32.2 252 81-392 9-286 (379)
76 3f3f_A Nucleoporin SEH1; struc 100.0 3.9E-38 1.3E-42 273.7 29.6 295 26-393 4-337 (351)
77 2aq5_A Coronin-1A; WD40 repeat 100.0 4.2E-38 1.4E-42 279.1 29.5 287 34-393 35-342 (402)
78 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-36 7.6E-41 291.9 38.9 315 3-392 27-385 (814)
79 1sq9_A Antiviral protein SKI8; 100.0 1.1E-36 3.6E-41 269.7 32.5 281 3-348 28-396 (397)
80 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-36 6.3E-41 263.4 32.3 298 25-393 11-336 (355)
81 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.5E-36 1.2E-40 270.6 33.7 295 33-392 4-390 (450)
82 2xyi_A Probable histone-bindin 100.0 3.7E-36 1.2E-40 268.7 32.9 251 81-392 126-409 (430)
83 3jrp_A Fusion protein of prote 100.0 2.4E-36 8.1E-41 265.6 30.8 260 25-347 3-287 (379)
84 4aow_A Guanine nucleotide-bind 100.0 1.7E-35 5.7E-40 256.4 32.4 280 3-349 53-339 (340)
85 1k8k_C P40, ARP2/3 complex 41 100.0 1.8E-35 6.1E-40 259.5 31.7 256 81-393 6-274 (372)
86 3v7d_B Cell division control p 100.0 4.8E-35 1.6E-39 264.5 35.2 261 81-393 119-381 (464)
87 1r5m_A SIR4-interacting protei 100.0 2.9E-35 9.9E-40 262.7 33.3 281 60-392 27-360 (425)
88 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-34 5.3E-39 259.6 38.2 285 3-348 131-443 (445)
89 3dm0_A Maltose-binding peripla 100.0 1.5E-35 5.2E-40 280.5 33.0 244 81-393 380-632 (694)
90 4aez_A CDC20, WD repeat-contai 100.0 3E-35 1E-39 260.5 32.5 268 4-349 106-382 (401)
91 3k26_A Polycomb protein EED; W 100.0 5.2E-36 1.8E-40 262.2 27.0 262 32-346 68-365 (366)
92 4gga_A P55CDC, cell division c 100.0 6.7E-35 2.3E-39 259.9 34.5 267 4-349 119-397 (420)
93 3dwl_C Actin-related protein 2 100.0 4.4E-37 1.5E-41 270.3 19.5 252 82-392 10-280 (377)
94 3i2n_A WD repeat-containing pr 100.0 1.7E-35 5.7E-40 258.1 28.5 287 5-349 35-355 (357)
95 3ei3_B DNA damage-binding prot 100.0 1.2E-34 4.2E-39 255.2 33.8 286 3-347 88-382 (383)
96 4e54_B DNA damage-binding prot 100.0 2.7E-36 9.2E-41 270.0 22.8 294 3-350 134-433 (435)
97 2j04_B YDR362CP, TAU91; beta p 100.0 6.9E-36 2.4E-40 270.5 24.9 285 7-348 179-518 (524)
98 3jro_A Fusion protein of prote 100.0 1.3E-35 4.3E-40 282.6 27.8 253 81-393 7-285 (753)
99 3dw8_B Serine/threonine-protei 100.0 4.6E-35 1.6E-39 263.3 28.1 254 81-393 26-373 (447)
100 1p22_A F-BOX/WD-repeat protein 100.0 7.6E-35 2.6E-39 260.8 28.7 268 3-349 145-416 (435)
101 4gq1_A NUP37; propeller, trans 100.0 3.8E-35 1.3E-39 258.8 26.1 320 34-391 16-387 (393)
102 3zwl_B Eukaryotic translation 100.0 1E-33 3.5E-38 247.9 34.9 252 81-393 30-304 (369)
103 3odt_A Protein DOA1; ubiquitin 100.0 1.2E-33 4E-38 241.8 33.6 264 3-350 31-299 (313)
104 3gre_A Serine/threonine-protei 100.0 2.7E-34 9.2E-39 257.6 30.6 308 3-344 78-437 (437)
105 4a11_B DNA excision repair pro 100.0 2.3E-34 8E-39 255.5 29.6 318 4-392 59-404 (408)
106 3bws_A Protein LP49; two-domai 100.0 1.6E-33 5.6E-38 252.2 34.7 293 22-393 112-432 (433)
107 2xyi_A Probable histone-bindin 100.0 2.8E-34 9.5E-39 256.5 29.5 259 28-348 123-411 (430)
108 1yfq_A Cell cycle arrest prote 100.0 5.9E-34 2E-38 246.9 29.1 252 81-393 9-282 (342)
109 3mmy_A MRNA export factor; mRN 100.0 2E-33 7E-38 245.8 32.6 246 81-393 37-304 (368)
110 4h5i_A Guanine nucleotide-exch 100.0 5.6E-34 1.9E-38 248.6 28.0 252 28-348 68-344 (365)
111 4ggc_A P55CDC, cell division c 100.0 9E-33 3.1E-37 236.9 34.9 267 4-349 39-317 (318)
112 3jro_A Fusion protein of prote 100.0 1.3E-34 4.4E-39 275.6 25.6 259 26-347 2-285 (753)
113 3lrv_A PRE-mRNA-splicing facto 100.0 4.8E-34 1.6E-38 247.4 26.9 262 48-390 47-330 (343)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.8E-34 6.1E-39 255.2 24.5 272 30-392 12-296 (588)
115 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-34 1.1E-38 254.2 26.3 273 6-350 52-345 (402)
116 2j04_A TAU60, YPL007P, hypothe 100.0 3.5E-34 1.2E-38 253.3 22.9 284 4-382 30-350 (588)
117 2w18_A PALB2, fancn, partner a 100.0 4E-32 1.4E-36 225.8 32.5 294 21-392 23-356 (356)
118 1l0q_A Surface layer protein; 100.0 2.2E-31 7.6E-36 235.1 37.6 265 49-393 2-275 (391)
119 3vu4_A KMHSV2; beta-propeller 100.0 3.5E-32 1.2E-36 236.5 30.5 259 62-393 3-271 (355)
120 4gq1_A NUP37; propeller, trans 100.0 1.4E-32 4.9E-37 242.3 23.1 258 48-347 100-389 (393)
121 3lrv_A PRE-mRNA-splicing facto 100.0 6E-32 2E-36 234.2 24.2 230 94-393 45-292 (343)
122 2w18_A PALB2, fancn, partner a 100.0 1E-30 3.5E-35 217.4 29.5 276 5-345 58-355 (356)
123 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5E-31 1.7E-35 237.0 30.1 243 84-391 5-337 (450)
124 3f3f_A Nucleoporin SEH1; struc 100.0 2.6E-31 8.8E-36 230.6 27.1 274 3-349 25-339 (351)
125 1l0q_A Surface layer protein; 100.0 1.4E-29 4.8E-34 223.5 37.3 305 4-393 5-342 (391)
126 1nir_A Nitrite reductase; hemo 100.0 5.3E-28 1.8E-32 220.6 33.5 302 20-393 166-514 (543)
127 3bws_A Protein LP49; two-domai 100.0 2.9E-27 9.8E-32 211.6 33.9 249 28-347 164-432 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-27 5.7E-32 211.2 24.5 277 34-393 63-387 (415)
129 1nir_A Nitrite reductase; hemo 100.0 5.6E-26 1.9E-30 207.3 34.3 280 40-393 144-458 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.9E-26 1.3E-30 202.4 29.5 267 26-375 110-410 (415)
131 3u4y_A Uncharacterized protein 100.0 4.2E-25 1.4E-29 190.3 32.5 279 48-393 9-304 (331)
132 1ri6_A Putative isomerase YBHE 99.9 8.9E-25 3E-29 189.1 32.4 279 49-392 5-307 (343)
133 3vgz_A Uncharacterized protein 99.9 2.7E-24 9.2E-29 186.9 31.7 270 32-383 39-334 (353)
134 1k32_A Tricorn protease; prote 99.9 1.3E-24 4.6E-29 214.3 32.3 310 26-393 45-461 (1045)
135 2ojh_A Uncharacterized protein 99.9 3.8E-25 1.3E-29 187.2 23.5 255 56-384 19-293 (297)
136 1pby_B Quinohemoprotein amine 99.9 1.4E-24 4.8E-29 187.4 26.5 275 50-393 2-310 (337)
137 2ecf_A Dipeptidyl peptidase IV 99.9 5.7E-25 1.9E-29 210.1 25.2 282 33-392 36-412 (741)
138 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-23 3.7E-28 187.3 27.9 306 33-392 36-404 (434)
139 2ecf_A Dipeptidyl peptidase IV 99.9 1E-23 3.5E-28 201.4 28.8 302 34-392 109-458 (741)
140 2z3z_A Dipeptidyl aminopeptida 99.9 7.8E-24 2.7E-28 201.1 26.1 305 34-393 82-435 (706)
141 1xfd_A DIP, dipeptidyl aminope 99.9 4E-24 1.4E-28 203.6 20.1 281 34-392 17-392 (723)
142 1k32_A Tricorn protease; prote 99.9 6.1E-23 2.1E-27 202.6 28.2 282 32-393 294-637 (1045)
143 3hfq_A Uncharacterized protein 99.9 2E-21 7E-26 168.4 33.4 269 60-392 18-316 (347)
144 1jmx_B Amine dehydrogenase; ox 99.9 2.8E-22 9.7E-27 173.8 26.4 294 39-393 5-325 (349)
145 1ri6_A Putative isomerase YBHE 99.9 9.1E-22 3.1E-26 170.2 29.0 298 9-375 13-335 (343)
146 3o4h_A Acylamino-acid-releasin 99.9 1.1E-22 3.7E-27 188.8 22.9 268 32-392 20-314 (582)
147 1xfd_A DIP, dipeptidyl aminope 99.9 9.2E-22 3.2E-26 187.4 28.8 310 23-380 47-427 (723)
148 3u4y_A Uncharacterized protein 99.9 4.6E-21 1.6E-25 165.0 29.7 261 23-348 30-305 (331)
149 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-21 3.7E-26 174.4 25.4 244 85-390 38-330 (434)
150 2z3z_A Dipeptidyl aminopeptida 99.9 7.1E-22 2.4E-26 187.6 24.8 282 35-392 27-390 (706)
151 3vgz_A Uncharacterized protein 99.9 8.9E-21 3.1E-25 164.6 29.6 241 84-393 41-303 (353)
152 2ojh_A Uncharacterized protein 99.9 1.1E-21 3.9E-26 165.7 21.7 237 28-337 36-292 (297)
153 3hfq_A Uncharacterized protein 99.9 8.7E-20 3E-24 158.1 31.4 253 31-347 37-317 (347)
154 3scy_A Hypothetical bacterial 99.9 1.8E-19 6E-24 157.1 33.0 274 59-392 28-336 (361)
155 3pe7_A Oligogalacturonate lyas 99.9 6.1E-20 2.1E-24 161.6 26.8 306 25-391 22-380 (388)
156 1z68_A Fibroblast activation p 99.9 4.8E-21 1.7E-25 182.2 21.2 284 37-392 19-390 (719)
157 1pby_B Quinohemoprotein amine 99.9 1.7E-19 5.8E-24 155.4 27.8 272 5-357 5-318 (337)
158 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.7E-19 5.9E-24 157.2 27.3 274 59-393 15-341 (365)
159 3o4h_A Acylamino-acid-releasin 99.9 2.4E-20 8.2E-25 173.0 20.5 233 83-391 21-274 (582)
160 3scy_A Hypothetical bacterial 99.9 2.7E-18 9.4E-23 149.5 31.9 273 32-371 48-360 (361)
161 1z68_A Fibroblast activation p 99.9 6E-20 2E-24 174.7 22.2 314 25-392 48-442 (719)
162 4a5s_A Dipeptidyl peptidase 4 99.9 9.1E-20 3.1E-24 173.6 23.1 286 33-392 16-352 (740)
163 3azo_A Aminopeptidase; POP fam 99.8 3.9E-18 1.3E-22 160.7 27.4 292 28-392 18-368 (662)
164 3c5m_A Oligogalacturonate lyas 99.8 6.8E-19 2.3E-23 155.3 20.1 287 36-391 38-380 (396)
165 1q7f_A NHL, brain tumor CG1071 99.8 1.1E-16 3.7E-21 134.6 31.2 238 83-393 29-280 (286)
166 2oiz_A Aromatic amine dehydrog 99.8 6.4E-17 2.2E-21 140.3 29.7 263 59-393 32-334 (361)
167 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.1E-17 7.1E-22 144.0 26.3 253 32-348 38-342 (365)
168 3fvz_A Peptidyl-glycine alpha- 99.8 5.8E-17 2E-21 139.0 26.9 243 83-392 23-321 (329)
169 2oiz_A Aromatic amine dehydrog 99.8 5.4E-17 1.8E-21 140.8 26.5 289 22-375 40-360 (361)
170 3pe7_A Oligogalacturonate lyas 99.8 1.8E-17 6.2E-22 145.8 23.0 257 61-393 13-329 (388)
171 2dg1_A DRP35, lactonase; beta 99.8 1.4E-16 4.8E-21 137.0 26.7 276 34-383 6-300 (333)
172 3fvz_A Peptidyl-glycine alpha- 99.8 4.3E-16 1.5E-20 133.6 29.6 244 33-348 23-323 (329)
173 1q7f_A NHL, brain tumor CG1071 99.8 9.5E-16 3.3E-20 128.8 31.1 245 31-349 27-282 (286)
174 1jmx_B Amine dehydrogenase; ox 99.8 1.3E-16 4.4E-21 138.1 26.2 259 23-357 31-333 (349)
175 3azo_A Aminopeptidase; POP fam 99.8 2.3E-16 8E-21 148.6 25.9 250 27-349 61-371 (662)
176 2gop_A Trilobed protease; beta 99.8 3.4E-15 1.2E-19 129.1 30.1 261 60-391 45-329 (347)
177 2z2n_A Virginiamycin B lyase; 99.8 4.6E-14 1.6E-18 119.2 36.4 281 29-393 10-295 (299)
178 3dsm_A Uncharacterized protein 99.7 5.1E-15 1.7E-19 126.7 28.2 262 59-392 18-301 (328)
179 3c5m_A Oligogalacturonate lyas 99.7 1.4E-16 4.9E-21 140.3 19.0 257 61-393 13-329 (396)
180 4a5s_A Dipeptidyl peptidase 4 99.7 3.6E-15 1.2E-19 142.0 27.8 324 26-392 49-448 (740)
181 3e5z_A Putative gluconolactona 99.7 1E-14 3.5E-19 123.1 27.4 236 84-392 28-285 (296)
182 1qks_A Cytochrome CD1 nitrite 99.7 1.4E-13 4.7E-18 125.5 36.5 278 48-393 166-477 (567)
183 2xdw_A Prolyl endopeptidase; a 99.7 4.8E-14 1.6E-18 133.7 33.7 245 82-393 123-414 (710)
184 2bkl_A Prolyl endopeptidase; m 99.7 6.6E-15 2.3E-19 139.2 27.1 244 81-393 118-397 (695)
185 3no2_A Uncharacterized protein 99.7 2.3E-14 7.8E-19 119.1 26.5 219 96-380 4-230 (276)
186 1qks_A Cytochrome CD1 nitrite 99.7 1.6E-13 5.5E-18 125.0 34.1 307 23-393 187-538 (567)
187 3e5z_A Putative gluconolactona 99.7 3.6E-14 1.2E-18 119.8 27.6 252 28-348 22-287 (296)
188 1rwi_B Serine/threonine-protei 99.7 1.7E-14 5.9E-19 120.0 25.1 237 85-393 25-264 (270)
189 2dg1_A DRP35, lactonase; beta 99.7 6.2E-14 2.1E-18 120.5 29.0 246 27-337 38-300 (333)
190 1rwi_B Serine/threonine-protei 99.7 2.1E-14 7.2E-19 119.5 22.6 237 35-349 25-266 (270)
191 2qc5_A Streptogramin B lactona 99.7 1.4E-12 4.8E-17 110.1 34.0 278 31-392 17-299 (300)
192 2bkl_A Prolyl endopeptidase; m 99.7 2.6E-15 9E-20 141.9 18.8 248 31-352 118-402 (695)
193 3dsm_A Uncharacterized protein 99.7 5.6E-13 1.9E-17 114.0 30.9 252 34-370 44-319 (328)
194 2gop_A Trilobed protease; beta 99.7 6.3E-14 2.1E-18 121.1 25.0 222 34-346 59-330 (347)
195 2xdw_A Prolyl endopeptidase; a 99.6 9.2E-14 3.2E-18 131.8 26.1 248 31-349 122-416 (710)
196 2mad_H Methylamine dehydrogena 99.6 4.3E-12 1.5E-16 110.0 33.8 260 59-393 48-350 (373)
197 1yr2_A Prolyl oligopeptidase; 99.6 5.8E-13 2E-17 126.8 30.0 258 84-393 163-441 (741)
198 2z2n_A Virginiamycin B lyase; 99.6 3.3E-12 1.1E-16 107.7 31.5 237 82-391 13-253 (299)
199 3no2_A Uncharacterized protein 99.6 1.3E-12 4.3E-17 108.6 27.7 248 48-369 4-272 (276)
200 3sjl_D Methylamine dehydrogena 99.6 1.6E-12 5.3E-17 111.4 26.7 269 48-393 43-363 (386)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 8.4E-12 2.9E-16 106.1 28.0 247 32-348 16-300 (314)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 5.8E-12 2E-16 107.1 26.2 241 86-393 20-299 (314)
203 1yr2_A Prolyl oligopeptidase; 99.5 7.2E-13 2.5E-17 126.2 22.1 248 31-349 160-443 (741)
204 3g4e_A Regucalcin; six bladed 99.5 1.4E-10 4.8E-15 97.7 33.2 235 29-327 8-254 (297)
205 3c75_H MADH, methylamine dehyd 99.5 4.4E-12 1.5E-16 110.6 24.4 267 59-393 100-402 (426)
206 1xip_A Nucleoporin NUP159; bet 99.5 1.1E-12 3.8E-17 112.7 20.0 149 35-232 39-192 (388)
207 3hrp_A Uncharacterized protein 99.5 1.2E-11 4E-16 108.9 26.8 259 34-345 131-408 (409)
208 3hrp_A Uncharacterized protein 99.5 1.8E-11 6.3E-16 107.6 27.8 251 85-392 132-409 (409)
209 2qc5_A Streptogramin B lactona 99.5 1.1E-10 3.6E-15 98.5 31.1 238 83-392 19-259 (300)
210 1xip_A Nucleoporin NUP159; bet 99.5 1.5E-12 5.2E-17 111.9 18.5 174 130-379 39-230 (388)
211 3sjl_D Methylamine dehydrogena 99.5 3.3E-11 1.1E-15 103.2 23.6 288 21-373 67-384 (386)
212 3g4e_A Regucalcin; six bladed 99.4 3.6E-10 1.2E-14 95.2 28.4 228 88-381 17-260 (297)
213 2mad_H Methylamine dehydrogena 99.4 4.8E-10 1.6E-14 97.2 29.6 268 23-355 57-356 (373)
214 2qe8_A Uncharacterized protein 99.4 3.8E-11 1.3E-15 103.3 21.1 270 34-383 17-311 (343)
215 3q7m_A Lipoprotein YFGL, BAMB; 99.4 6.5E-09 2.2E-13 90.6 34.4 260 49-390 104-375 (376)
216 2ghs_A AGR_C_1268P; regucalcin 99.4 4.5E-09 1.5E-13 89.6 31.9 224 34-327 49-284 (326)
217 3dr2_A Exported gluconolactona 99.4 4.3E-10 1.5E-14 95.1 25.0 231 86-390 47-303 (305)
218 2ghs_A AGR_C_1268P; regucalcin 99.4 2.7E-09 9.2E-14 91.0 28.6 224 88-381 53-290 (326)
219 1mda_H Methylamine dehydrogena 99.3 2.5E-10 8.6E-15 97.9 21.9 255 59-393 47-346 (368)
220 3iuj_A Prolyl endopeptidase; h 99.3 2.6E-10 8.9E-15 107.6 24.1 247 30-350 125-408 (693)
221 3iuj_A Prolyl endopeptidase; h 99.3 4.2E-10 1.4E-14 106.3 24.6 256 82-393 127-405 (693)
222 3q7m_A Lipoprotein YFGL, BAMB; 99.3 8.4E-09 2.9E-13 89.9 30.9 271 51-393 55-337 (376)
223 2ece_A 462AA long hypothetical 99.3 3.4E-09 1.2E-13 91.5 27.3 272 59-381 44-399 (462)
224 1kb0_A Quinohemoprotein alcoho 99.3 8.4E-10 2.9E-14 103.3 25.2 297 49-393 78-507 (677)
225 3dr2_A Exported gluconolactona 99.3 3.8E-09 1.3E-13 89.2 25.9 246 29-344 40-303 (305)
226 3hxj_A Pyrrolo-quinoline quino 99.3 4.6E-10 1.6E-14 96.0 20.3 264 33-392 59-323 (330)
227 1yiq_A Quinohemoprotein alcoho 99.3 1.2E-09 4.1E-14 102.6 24.5 300 49-393 71-505 (689)
228 3c75_H MADH, methylamine dehyd 99.3 1.1E-09 3.6E-14 95.7 21.4 274 20-356 106-409 (426)
229 1npe_A Nidogen, entactin; glyc 99.2 1.5E-07 5E-12 77.8 31.3 252 50-375 2-263 (267)
230 1kb0_A Quinohemoprotein alcoho 99.2 1.4E-08 4.7E-13 95.2 26.5 298 50-378 129-535 (677)
231 1yiq_A Quinohemoprotein alcoho 99.2 2.3E-08 7.7E-13 93.9 27.9 173 50-235 122-342 (689)
232 2hz6_A Endoplasmic reticulum t 99.2 2.4E-11 8.1E-16 105.5 7.0 205 96-375 8-216 (369)
233 2hz6_A Endoplasmic reticulum t 99.2 7.2E-12 2.5E-16 108.8 3.0 178 49-296 9-194 (369)
234 2qe8_A Uncharacterized protein 99.2 2.6E-09 9E-14 91.8 18.7 234 85-391 18-276 (343)
235 1mda_H Methylamine dehydrogena 99.2 2.5E-09 8.6E-14 91.7 17.9 275 21-372 54-366 (368)
236 4a2l_A BT_4663, two-component 99.1 1.1E-06 3.9E-11 84.3 36.9 310 36-392 175-525 (795)
237 4a2l_A BT_4663, two-component 99.1 3.4E-06 1.2E-10 81.1 39.2 312 33-392 214-570 (795)
238 1npe_A Nidogen, entactin; glyc 99.1 8.2E-07 2.8E-11 73.2 29.1 226 100-393 3-238 (267)
239 2iwa_A Glutamine cyclotransfer 99.1 7.3E-08 2.5E-12 78.2 22.0 193 87-348 24-238 (266)
240 2iwa_A Glutamine cyclotransfer 99.1 2.1E-07 7.1E-12 75.5 24.3 208 119-392 10-236 (266)
241 3nol_A Glutamine cyclotransfer 99.0 2.1E-07 7.3E-12 74.5 22.5 192 119-382 32-244 (262)
242 1fwx_A Nitrous oxide reductase 99.0 7E-08 2.4E-12 86.4 21.1 276 52-392 18-360 (595)
243 1kv9_A Type II quinohemoprotei 99.0 1.2E-07 4.1E-12 88.8 23.9 298 49-393 67-488 (668)
244 3hxj_A Pyrrolo-quinoline quino 99.0 5.4E-08 1.8E-12 83.0 19.6 217 49-348 108-325 (330)
245 3v9f_A Two-component system se 99.0 3.1E-06 1E-10 81.2 32.9 314 34-392 211-567 (781)
246 2ece_A 462AA long hypothetical 99.0 3.4E-07 1.2E-11 79.2 23.3 182 175-392 105-351 (462)
247 3nol_A Glutamine cyclotransfer 99.0 4E-07 1.4E-11 73.0 21.8 180 96-335 52-244 (262)
248 3v65_B Low-density lipoprotein 98.9 7.7E-06 2.6E-10 71.2 31.1 229 50-349 88-320 (386)
249 3nok_A Glutaminyl cyclase; bet 98.9 8.1E-07 2.8E-11 71.2 22.3 192 119-381 44-253 (268)
250 3v64_C Agrin; beta propeller, 98.9 1.5E-05 5.1E-10 68.3 31.7 241 33-349 33-277 (349)
251 3mbr_X Glutamine cyclotransfer 98.9 1.6E-06 5.6E-11 68.8 23.3 194 119-382 10-223 (243)
252 3v9f_A Two-component system se 98.9 2.4E-05 8.2E-10 75.0 35.7 314 33-392 257-610 (781)
253 1fwx_A Nitrous oxide reductase 98.9 5.5E-07 1.9E-11 80.7 21.7 280 48-357 100-441 (595)
254 3nok_A Glutaminyl cyclase; bet 98.9 1.2E-06 4E-11 70.3 20.9 185 87-335 58-254 (268)
255 3mbr_X Glutamine cyclotransfer 98.8 2.5E-06 8.6E-11 67.8 22.5 189 86-336 23-224 (243)
256 2ad6_A Methanol dehydrogenase 98.8 4E-06 1.4E-10 76.9 27.2 118 49-193 63-193 (571)
257 1kv9_A Type II quinohemoprotei 98.8 8.3E-06 2.9E-10 76.4 29.3 171 51-235 119-337 (668)
258 1w6s_A Methanol dehydrogenase 98.8 4.9E-06 1.7E-10 76.3 25.6 122 49-194 63-200 (599)
259 1k3i_A Galactose oxidase precu 98.8 1.5E-06 5E-11 81.6 22.6 281 38-382 190-530 (656)
260 2p4o_A Hypothetical protein; p 98.8 3.5E-05 1.2E-09 64.8 29.0 238 86-382 34-277 (306)
261 1ijq_A LDL receptor, low-densi 98.8 5.5E-05 1.9E-09 63.9 30.3 225 101-391 4-236 (316)
262 1ijq_A LDL receptor, low-densi 98.8 5.7E-05 1.9E-09 63.8 33.3 230 51-349 3-240 (316)
263 3v64_C Agrin; beta propeller, 98.7 0.00011 3.7E-09 63.0 29.7 223 100-390 46-272 (349)
264 3v65_B Low-density lipoprotein 98.7 3.9E-05 1.3E-09 66.8 27.0 202 34-296 116-320 (386)
265 2ad6_A Methanol dehydrogenase 98.7 3.5E-05 1.2E-09 70.6 27.7 169 51-236 117-340 (571)
266 2fp8_A Strictosidine synthase; 98.7 5E-05 1.7E-09 64.3 26.6 257 34-348 19-314 (322)
267 1flg_A Protein (quinoprotein e 98.6 8.2E-06 2.8E-10 74.9 22.4 74 48-126 68-145 (582)
268 3qqz_A Putative uncharacterize 98.6 6.1E-05 2.1E-09 60.7 24.3 218 124-390 22-250 (255)
269 3p5b_L Low density lipoprotein 98.6 0.00022 7.5E-09 62.3 30.4 225 100-390 85-317 (400)
270 3qqz_A Putative uncharacterize 98.6 0.00015 5.1E-09 58.5 25.9 211 81-345 24-251 (255)
271 3p5b_L Low density lipoprotein 98.6 0.0003 1E-08 61.4 34.1 231 50-349 84-322 (400)
272 2fp8_A Strictosidine synthase; 98.5 6.8E-05 2.3E-09 63.5 24.4 236 88-392 23-312 (322)
273 1k3i_A Galactose oxidase precu 98.5 8.6E-06 3E-10 76.3 20.0 251 95-393 195-497 (656)
274 3sov_A LRP-6, low-density lipo 98.5 0.00031 1.1E-08 59.1 28.7 228 51-349 6-240 (318)
275 3m0c_C LDL receptor, low-densi 98.5 0.00056 1.9E-08 64.9 31.2 230 51-349 397-634 (791)
276 2xe4_A Oligopeptidase B; hydro 98.5 8.3E-05 2.8E-09 70.8 25.4 112 87-231 175-304 (751)
277 2p4o_A Hypothetical protein; p 98.5 0.00042 1.4E-08 58.1 28.9 238 22-335 21-276 (306)
278 3sov_A LRP-6, low-density lipo 98.4 0.00053 1.8E-08 57.8 26.9 202 34-296 35-240 (318)
279 1w6s_A Methanol dehydrogenase 98.4 0.00047 1.6E-08 63.3 27.7 168 52-237 124-348 (599)
280 1flg_A Protein (quinoprotein e 98.4 0.0005 1.7E-08 63.2 27.9 59 176-237 291-361 (582)
281 3m0c_C LDL receptor, low-densi 98.3 0.0016 5.6E-08 61.8 29.8 220 107-391 403-630 (791)
282 3tc9_A Hypothetical hydrolase; 98.3 0.00096 3.3E-08 58.9 26.4 155 35-231 138-301 (430)
283 2xe4_A Oligopeptidase B; hydro 98.3 0.00012 4.1E-09 69.7 22.0 157 35-231 175-354 (751)
284 1n7d_A LDL receptor, low-densi 98.3 8.1E-06 2.8E-10 76.7 12.5 228 52-348 380-615 (699)
285 3kya_A Putative phosphatase; s 98.2 0.0021 7.2E-08 57.0 26.5 160 36-231 141-341 (496)
286 4hw6_A Hypothetical protein, I 98.2 0.0026 9E-08 56.0 26.9 159 35-231 140-304 (433)
287 3tc9_A Hypothetical hydrolase; 98.2 0.0025 8.5E-08 56.2 26.5 243 87-392 140-429 (430)
288 1n7d_A LDL receptor, low-densi 98.2 1.8E-05 6E-10 74.4 12.5 220 107-391 385-612 (699)
289 2vpj_A Kelch-like protein 12; 98.1 0.0017 5.7E-08 54.3 23.0 243 48-357 14-288 (301)
290 3ii7_A Kelch-like protein 7; p 98.1 0.0026 8.9E-08 53.2 25.3 243 49-357 12-282 (306)
291 2vpj_A Kelch-like protein 12; 98.1 0.00087 3E-08 56.0 21.0 178 176-393 78-278 (301)
292 3amr_A 3-phytase; beta-propell 98.1 0.0018 6.1E-08 54.4 21.7 191 175-392 49-262 (355)
293 2p9w_A MAL S 1 allergenic prot 98.1 0.0032 1.1E-07 52.3 22.7 167 31-231 10-215 (334)
294 3s94_A LRP-6, low-density lipo 98.1 0.0071 2.4E-07 56.0 32.8 161 34-231 40-202 (619)
295 3ii7_A Kelch-like protein 7; p 98.0 0.0029 9.9E-08 52.9 22.6 230 100-393 14-272 (306)
296 2xn4_A Kelch-like protein 2; s 98.0 0.0015 5.3E-08 54.5 20.6 178 176-393 77-276 (302)
297 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0093 3.2E-07 55.3 31.5 229 50-349 7-239 (628)
298 3amr_A 3-phytase; beta-propell 98.0 0.0046 1.6E-07 51.9 22.4 197 41-293 33-262 (355)
299 2xzh_A Clathrin heavy chain 1; 98.0 0.0045 1.5E-07 51.1 32.3 260 60-391 51-330 (365)
300 2xbg_A YCF48-like protein; pho 98.0 0.006 2.1E-07 51.6 25.8 198 32-292 120-320 (327)
301 4hw6_A Hypothetical protein, I 97.9 0.0087 3E-07 52.7 26.1 245 87-392 142-432 (433)
302 3s94_A LRP-6, low-density lipo 97.9 0.012 4.2E-07 54.4 26.6 228 51-349 11-245 (619)
303 2xbg_A YCF48-like protein; pho 97.9 0.0079 2.7E-07 50.8 33.3 279 33-390 35-319 (327)
304 2xn4_A Kelch-like protein 2; s 97.9 0.0076 2.6E-07 50.2 23.2 230 49-349 16-278 (302)
305 1zgk_A Kelch-like ECH-associat 97.9 0.0054 1.9E-07 51.3 21.7 178 176-393 90-287 (308)
306 1bpo_A Protein (clathrin); cla 97.8 0.012 4.2E-07 50.6 32.3 260 60-391 50-329 (494)
307 1zgk_A Kelch-like ECH-associat 97.8 0.012 3.9E-07 49.3 21.6 243 48-357 24-297 (308)
308 4a0p_A LRP6, LRP-6, low-densit 97.7 0.027 9.1E-07 52.2 36.5 199 34-296 37-239 (628)
309 3kya_A Putative phosphatase; s 97.7 0.022 7.5E-07 50.6 26.6 259 87-393 142-475 (496)
310 4asc_A Kelch repeat and BTB do 97.7 0.013 4.6E-07 49.1 21.3 237 100-393 7-277 (315)
311 3ei3_A DNA damage-binding prot 97.7 0.052 1.8E-06 54.0 32.0 177 175-389 863-1058(1158)
312 4asc_A Kelch repeat and BTB do 97.7 0.018 6.1E-07 48.3 22.3 142 176-353 117-283 (315)
313 3ott_A Two-component system se 97.5 0.075 2.6E-06 50.7 34.5 289 34-391 146-446 (758)
314 2ism_A Putative oxidoreductase 97.5 0.038 1.3E-06 47.2 24.1 104 34-148 31-153 (352)
315 2uvk_A YJHT; unknown function, 97.4 0.044 1.5E-06 46.8 22.3 66 48-119 19-97 (357)
316 2woz_A Kelch repeat and BTB do 97.4 0.047 1.6E-06 45.8 22.9 106 273-393 157-287 (318)
317 2p9w_A MAL S 1 allergenic prot 97.3 0.056 1.9E-06 45.0 23.0 176 127-347 11-215 (334)
318 1xi4_A Clathrin heavy chain; a 97.2 0.04 1.4E-06 54.9 19.9 226 60-357 50-299 (1630)
319 2ism_A Putative oxidoreductase 97.1 0.1 3.5E-06 44.5 28.1 61 316-381 269-333 (352)
320 2uvk_A YJHT; unknown function, 97.1 0.1 3.4E-06 44.6 19.9 51 339-393 286-342 (357)
321 2woz_A Kelch repeat and BTB do 97.0 0.12 4E-06 43.3 23.9 140 177-352 128-292 (318)
322 3pbp_A Nucleoporin NUP82; beta 96.8 0.17 6E-06 43.6 18.0 153 175-343 40-208 (452)
323 2xzh_A Clathrin heavy chain 1; 96.7 0.19 6.6E-06 41.6 29.9 242 48-348 77-333 (365)
324 3a9g_A Putative uncharacterize 96.6 0.3 1E-05 41.6 29.1 64 315-381 259-330 (354)
325 3a9g_A Putative uncharacterize 96.4 0.36 1.2E-05 41.1 29.2 115 22-148 18-153 (354)
326 3ei3_A DNA damage-binding prot 96.4 0.89 3.1E-05 45.4 33.9 138 57-231 491-636 (1158)
327 1bpo_A Protein (clathrin); cla 96.2 0.55 1.9E-05 40.7 29.0 241 48-348 76-332 (494)
328 3ott_A Two-component system se 96.2 0.94 3.2E-05 43.1 35.3 277 34-388 324-622 (758)
329 3sre_A PON1, serum paraoxonase 96.1 0.57 2E-05 39.7 18.8 158 34-228 112-295 (355)
330 2zwa_A Leucine carboxyl methyl 96.0 1 3.5E-05 42.3 21.4 189 176-393 412-635 (695)
331 1tl2_A L10, protein (tachylect 96.0 0.22 7.5E-06 38.7 12.6 156 200-386 41-203 (236)
332 3sre_A PON1, serum paraoxonase 95.7 0.84 2.9E-05 38.7 21.8 172 106-335 81-285 (355)
333 1xi4_A Clathrin heavy chain; a 95.7 0.57 2E-05 47.1 16.8 220 107-393 47-289 (1630)
334 2g8s_A Glucose/sorbosone dehyd 95.6 0.9 3.1E-05 38.6 27.8 74 315-391 271-350 (353)
335 2be1_A Serine/threonine-protei 95.6 0.89 3E-05 38.2 21.1 113 100-238 12-137 (339)
336 2be1_A Serine/threonine-protei 95.5 0.055 1.9E-06 45.5 8.2 117 166-296 10-132 (339)
337 2zwa_A Leucine carboxyl methyl 95.2 2.1 7.1E-05 40.3 19.9 53 177-232 469-523 (695)
338 3pbp_A Nucleoporin NUP82; beta 95.2 1.4 4.8E-05 38.1 19.0 119 267-388 67-207 (452)
339 3qhy_B Beta-lactamase inhibito 94.1 2 6.8E-05 35.1 17.6 165 175-391 80-244 (282)
340 3das_A Putative oxidoreductase 93.7 2.8 9.5E-05 35.4 27.8 61 316-381 264-326 (347)
341 3sbq_A Nitrous-oxide reductase 93.3 4.4 0.00015 36.5 20.6 97 51-149 72-196 (638)
342 2g8s_A Glucose/sorbosone dehyd 93.0 3.7 0.00013 34.8 24.4 106 34-148 18-148 (353)
343 3das_A Putative oxidoreductase 92.9 3.8 0.00013 34.5 29.9 269 32-338 30-330 (347)
344 4gq2_M Nucleoporin NUP120; bet 90.1 11 0.00039 36.8 15.9 36 89-125 239-274 (950)
345 1cru_A Protein (soluble quinop 89.9 9.8 0.00034 33.5 15.2 110 264-382 25-163 (454)
346 1tl2_A L10, protein (tachylect 89.2 6.6 0.00023 30.6 14.7 97 100-231 6-116 (236)
347 3uc1_A DNA gyrase subunit A; D 85.8 14 0.00049 30.8 19.4 118 83-231 94-228 (327)
348 4gq2_M Nucleoporin NUP120; bet 84.1 34 0.0011 33.6 16.6 34 316-351 237-270 (950)
349 2wg3_C Hedgehog-interacting pr 83.1 24 0.00082 31.1 14.3 114 267-383 15-159 (463)
350 3qhy_B Beta-lactamase inhibito 83.1 17 0.00059 29.5 17.1 147 175-375 119-266 (282)
351 1q47_A Semaphorin 3A; beta pro 81.3 9.6 0.00033 34.0 9.5 73 316-388 405-487 (495)
352 3sbq_A Nitrous-oxide reductase 81.2 20 0.00069 32.4 11.2 72 130-231 324-408 (638)
353 3al9_A Plexin-A2; beta-propell 80.6 8.1 0.00028 34.9 8.9 73 316-388 401-476 (539)
354 4fhn_B Nucleoporin NUP120; pro 78.7 9.5 0.00033 38.2 9.7 30 95-125 247-276 (1139)
355 1cru_A Protein (soluble quinop 77.1 38 0.0013 29.8 32.7 57 329-387 370-430 (454)
356 4gz8_A Semaphorin-3A; multi-do 72.0 33 0.0011 31.9 10.5 72 317-388 414-495 (667)
357 3ol2_B Plexin-B1; beta-propell 69.9 25 0.00086 31.5 9.1 72 316-388 388-461 (528)
358 1olz_A Semaphorin 4D; developm 67.8 44 0.0015 31.1 10.5 73 316-388 398-477 (663)
359 3nvq_A Semaphorin-7A; beta-pro 60.7 39 0.0013 30.8 8.5 61 328-388 380-444 (590)
360 3f7f_A Nucleoporin NUP120; nuc 60.1 41 0.0014 31.5 8.7 30 96-126 230-259 (729)
361 1sqj_A OXG-RCBH, oligoxylogluc 58.7 1.3E+02 0.0044 28.8 15.8 112 33-149 14-141 (789)
362 3f7f_A Nucleoporin NUP120; nuc 58.5 31 0.0011 32.2 7.6 31 266-296 222-252 (729)
363 3b7f_A Glycosyl hydrolase, BNR 58.2 86 0.0029 26.6 27.1 26 200-225 177-202 (394)
364 3oky_B Putative uncharacterize 58.0 1.1E+02 0.0037 27.8 10.9 73 316-388 404-495 (565)
365 3uc1_A DNA gyrase subunit A; D 56.3 86 0.003 26.0 22.8 174 199-392 94-278 (327)
366 3no0_A DNA gyrase subunit A; D 55.9 79 0.0027 25.5 20.8 150 175-347 89-246 (276)
367 3zwu_A Alkaline phosphatase PH 55.4 33 0.0011 31.4 7.2 59 317-380 478-548 (592)
368 3oky_A Plexin-A2; transmembran 55.1 33 0.0011 32.0 7.3 73 316-388 400-475 (681)
369 4a9v_A PHOX; hydrolase, beta-p 54.5 48 0.0016 30.1 7.9 60 316-380 477-548 (592)
370 3s25_A Hypothetical 7-bladed b 54.1 89 0.003 25.5 22.5 121 60-231 90-216 (302)
371 2wg3_C Hedgehog-interacting pr 53.3 1.2E+02 0.004 26.7 27.0 67 315-381 276-354 (463)
372 1zi0_A DNA gyrase subunit A; b 52.0 98 0.0033 25.4 24.1 173 199-391 94-275 (307)
373 3s25_A Hypothetical 7-bladed b 49.1 1.1E+02 0.0037 25.0 23.8 48 175-231 128-176 (302)
374 3l6v_A GYRA, DNA gyrase subuni 42.9 1.5E+02 0.0053 25.1 23.6 148 175-347 16-180 (370)
375 1suu_A DNA gyrase subunit A; t 41.1 1.5E+02 0.0051 24.4 22.3 197 172-392 14-230 (312)
376 3zwu_A Alkaline phosphatase PH 40.1 98 0.0033 28.3 7.8 39 177-218 510-548 (592)
377 4fhn_B Nucleoporin NUP120; pro 37.7 25 0.00084 35.3 3.9 27 167-193 250-276 (1139)
378 3q6k_A 43.2 kDa salivary prote 36.0 2E+02 0.007 24.5 20.9 175 109-336 124-343 (381)
379 3b7f_A Glycosyl hydrolase, BNR 35.1 2E+02 0.007 24.2 24.5 49 100-149 24-75 (394)
380 4a9v_A PHOX; hydrolase, beta-p 30.5 2.5E+02 0.0085 25.6 8.6 39 177-218 510-548 (592)
381 4fww_A Macrophage-stimulating 28.7 1.6E+02 0.0054 26.4 7.3 74 314-388 404-479 (527)
382 3mvd_K Regulator of chromosome 28.5 2.8E+02 0.0096 23.7 30.2 182 199-391 178-372 (423)
383 2cn3_A Xyloglucanase, beta-1,4 27.7 3.9E+02 0.013 25.1 14.5 111 34-148 23-151 (737)
384 1wp5_A Topoisomerase IV; broke 27.7 2.6E+02 0.0089 23.1 23.3 175 200-392 92-276 (323)
385 3no0_A DNA gyrase subunit A; D 24.9 2.7E+02 0.0091 22.3 21.8 203 34-295 24-247 (276)
386 3nvn_B Plexin-C1; beta-propell 24.4 3.7E+02 0.012 23.7 8.6 71 316-389 341-417 (476)
387 3l6v_A GYRA, DNA gyrase subuni 23.9 3.3E+02 0.011 23.0 25.3 174 199-390 98-313 (370)
388 1olz_A Semaphorin 4D; developm 20.8 2.9E+02 0.0099 25.7 7.5 57 168-226 417-477 (663)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-51 Score=364.29 Aligned_cols=287 Identities=22% Similarity=0.390 Sum_probs=262.1
Q ss_pred eeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEe
Q 016185 26 TNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~ 104 (394)
...+.+|.++|++++|+| ++.+|++|+.|+ |+|||+.+++....+. .|...|.+++|+ |+++ +|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p----~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~-----~h~~~V~~v~~~--~~~~-~l~sg 168 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHP----VFSVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISFD--HSGK-LLASC 168 (410)
T ss_dssp SCEEECCSSCEEEEEECS----SSSEEEEEESSSCEEEEETTTCCCCEEEC-----CCSSCEEEEEEC--TTSS-EEEEE
T ss_pred eEeecccCCcEEEEEEcC----CCCEEEEEeCCCeEEEEECCCCcEEEEEe-----ccCCcEEEEEEc--CCCC-EEEEE
Confidence 456789999999999999 789999999998 9999999999888887 688899999988 8998 99999
Q ss_pred ecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEec
Q 016185 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ 184 (394)
Q Consensus 105 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~ 184 (394)
+.|+.|++||+.+++++..+.+|...|.+++|+| ++.+|++++. |+.|++||++
T Consensus 169 s~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~-------------------------D~~i~~wd~~ 222 (410)
T 1vyh_C 169 SADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASR-------------------------DKTIKMWEVQ 222 (410)
T ss_dssp ETTSCCCEEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEET-------------------------TSEEEEEETT
T ss_pred eCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeC-CCCEEEEEeC-------------------------CCeEEEEECC
Confidence 9999999999999999999999999999999999 7889999999 9999999999
Q ss_pred CCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecC
Q 016185 185 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 264 (394)
Q Consensus 185 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (394)
+++.+..+. +|...|.++.++| ++.+|++|+.|+.|++||+++ ......+..|
T Consensus 223 ~~~~~~~~~---~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~-----------------------~~~~~~~~~h 275 (410)
T 1vyh_C 223 TGYCVKTFT---GHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVAT-----------------------KECKAELREH 275 (410)
T ss_dssp TCCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------CCEEEEECCC
T ss_pred CCcEEEEEe---CCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCC-----------------------CceeeEecCC
Confidence 999999998 8999999999999 999999999999999999988 3346677889
Q ss_pred CCceEEEEEe----------------------CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEE
Q 016185 265 SNYVDCNRWL----------------------GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKF 322 (394)
Q Consensus 265 ~~~i~~~~~~----------------------~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 322 (394)
...|.+++|+ +.++++++.|+.|++||+++++ .+..+.+|...|.+++|
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~---------~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM---------CLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE---------EEEEEECCSSCEEEEEE
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc---------eEEEEECCCCcEEEEEE
Confidence 9999999996 3489999999999999999775 67778889999999999
Q ss_pred eecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 323 SCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 323 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
+|++ .+|++|+.|+.|++||+.+++ .+..+. +|...|++++|+|++.+|++|+.||.|++|+++
T Consensus 347 ~~~g--~~l~s~s~D~~i~vwd~~~~~--~~~~~~--~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 347 HSGG--KFILSCADDKTLRVWDYKNKR--CMKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CSSS--SCEEEEETTTEEEEECCTTSC--CCEEEE--CCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred cCCC--CEEEEEeCCCeEEEEECCCCc--eEEEEc--CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999 689999999999999998874 566677 888999999999999999999999999999974
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-50 Score=345.23 Aligned_cols=293 Identities=14% Similarity=0.179 Sum_probs=257.7
Q ss_pred eeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEe
Q 016185 26 TNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~ 104 (394)
.+.+++|.++|++++|+|+...++.+|++|+.|+ |+||++..++...... ..+|...|.+++|+ +++. +++++
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~---l~gh~~~v~~~~~~--~~~~-~l~s~ 98 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWS---LEGHQLGVVSVDIS--HTLP-IAASS 98 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEE---ECCCSSCEEEEEEC--SSSS-EEEEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeee---eccCCCCEEEEEEC--CCCC-EEEEE
Confidence 3566899999999999984334578999999999 9999988765422211 12788999999888 8898 99999
Q ss_pred ecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEec
Q 016185 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ 184 (394)
Q Consensus 105 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~ 184 (394)
+.|+.|++||+.+++.+..+..|...+.+++|+| ++.+|++++. |+.|++||++
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~-------------------------dg~v~i~~~~ 152 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTH-------------------------VGKVNIFGVE 152 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECT-------------------------TSEEEEEETT
T ss_pred eCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcC-------------------------CCcEEEEEcC
Confidence 9999999999999999999999999999999999 7899999999 9999999999
Q ss_pred CCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecC
Q 016185 185 TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 264 (394)
Q Consensus 185 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (394)
+++....+. .|...|.+++|+| ++++|++|+.||.|++||+++ ...+..+.+|
T Consensus 153 ~~~~~~~~~---~~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~-----------------------~~~~~~~~~h 205 (321)
T 3ow8_A 153 SGKKEYSLD---TRGKFILSIAYSP-DGKYLASGAIDGIINIFDIAT-----------------------GKLLHTLEGH 205 (321)
T ss_dssp TCSEEEEEE---CSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------TEEEEEECCC
T ss_pred CCceeEEec---CCCceEEEEEECC-CCCEEEEEcCCCeEEEEECCC-----------------------CcEEEEEccc
Confidence 999988887 7889999999999 999999999999999999998 3457778899
Q ss_pred CCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEE
Q 016185 265 SNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFV 342 (394)
Q Consensus 265 ~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i 342 (394)
...|.+++|+ +++|++++.|+.|++||+++.+ ....+.+|...|.+++|+|++ .+|++++.|+.|++
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~~~~sp~~--~~l~s~s~D~~v~i 274 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN---------LAGTLSGHASWVLNVAFCPDD--THFVSSSSDKSVKV 274 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC---------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc---------eeEEEcCCCCceEEEEECCCC--CEEEEEeCCCcEEE
Confidence 9999999998 7799999999999999998765 567788899999999999999 68999999999999
Q ss_pred EEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 343 WELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 343 wd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
||+.++ ..+..+. +|...|.+++|+|++++|++++.||.|+|||+.
T Consensus 275 wd~~~~--~~~~~~~--~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 275 WDVGTR--TCVHTFF--DHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EETTTT--EEEEEEC--CCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EeCCCC--EEEEEEc--CCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999887 4677777 888999999999999999999999999999963
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.5e-49 Score=342.84 Aligned_cols=289 Identities=18% Similarity=0.329 Sum_probs=256.2
Q ss_pred cccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCc
Q 016185 21 REYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIP 99 (394)
Q Consensus 21 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (394)
..++..+.+++|.++|++++|+| ++++|++++.|+ |++||+.+++.+..+. .|...|.+++|+ |+++
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~----d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-----~~~~~v~~~~~s--~~~~- 110 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGT----DSRLLLSASQDGKLIIWDSYTTNKVHAIP-----LRSSWVMTCAYA--PSGN- 110 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECT----TSSEEEEEETTTEEEEEETTTCCEEEEEE-----CSSSCEEEEEEC--TTSS-
T ss_pred ccchhheeecCCCCceEEEEECC----CCCEEEEEeCCCcEEEEECCCCCcceEee-----cCCccEEEEEEC--CCCC-
Confidence 34667788999999999999999 789999999999 9999999998888877 577889999888 9999
Q ss_pred EEEEeecCCeEEEEECCCC----eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 100 FLVAGGINGIIRVIDVSNE----KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
+|++|+.|+.|++|++.+. +....+.+|.+.|.++.|++ ++ .+++++. |
T Consensus 111 ~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~-------------------------d 163 (340)
T 1got_B 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSG-------------------------D 163 (340)
T ss_dssp EEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TT-EEEEEET-------------------------T
T ss_pred EEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECC-CC-cEEEEEC-------------------------C
Confidence 9999999999999999865 45677889999999999998 44 4788888 9
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccc
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 255 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (394)
+.|++||+++++.+..+. +|...|.+++|+| ++.+|++|+.|+.|++||+++ .
T Consensus 164 ~~i~~wd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~-----------------------~ 216 (340)
T 1got_B 164 TTCALWDIETGQQTTTFT---GHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVRE-----------------------G 216 (340)
T ss_dssp SCEEEEETTTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------C
T ss_pred CcEEEEECCCCcEEEEEc---CCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCC-----------------------C
Confidence 999999999999998888 8999999999999 999999999999999999998 3
Q ss_pred cceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc--cCCCCCeEEEEEeecCCcceE
Q 016185 256 FPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY--PVPECDIWFIKFSCDFHYNAA 331 (394)
Q Consensus 256 ~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l 331 (394)
..+..+..|...|.+++|+ ++++++++.||.|++||+++.+ .+..+ ..+...|.+++|+|++ .+|
T Consensus 217 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~---------~~~~~~~~~~~~~v~~~~~s~~g--~~l 285 (340)
T 1got_B 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ---------ELMTYSHDNIICGITSVSFSKSG--RLL 285 (340)
T ss_dssp SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EEEEECCTTCCSCEEEEEECTTS--SEE
T ss_pred eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc---------EEEEEccCCcccceEEEEECCCC--CEE
Confidence 4567788999999999998 7899999999999999998764 22222 2334579999999999 699
Q ss_pred EEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 332 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 332 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
++|+.|+.|++||+.+++ ....+. +|..+|.+++|+|++.+|++|+.||.|+|||
T Consensus 286 ~~g~~d~~i~vwd~~~~~--~~~~~~--~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 286 LAGYDDFNCNVWDALKAD--RAGVLA--GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSEEEEEETTTCC--EEEEEE--CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCCeEEEEEcccCc--EeeEee--cCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999998874 566677 8999999999999999999999999999997
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.4e-48 Score=332.89 Aligned_cols=292 Identities=19% Similarity=0.252 Sum_probs=253.5
Q ss_pred cceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEE
Q 016185 23 YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFL 101 (394)
Q Consensus 23 ~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 101 (394)
+++.++|++|.+.|++++|+| ++++|++++.|+ |++||+.++..+..+. .|..+|.+++|. |+++ +|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp----~~~~l~s~~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~--~~~~-~l 70 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP----TEPWVLTTLYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFI--ARKN-WI 70 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS----SSSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEE--GGGT-EE
T ss_pred ceeEEeecCCCCceEEEEECC----CCCEEEEEcCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEe--CCCC-EE
Confidence 566788999999999999999 799999999998 9999999998888887 678899999988 8898 99
Q ss_pred EEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEE
Q 016185 102 VAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLW 181 (394)
Q Consensus 102 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vw 181 (394)
++|+.|+.|++||+.+++.+..+.+|...|.+++|+| ++.+|++|+. |++|++|
T Consensus 71 ~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~-------------------------D~~v~lW 124 (304)
T 2ynn_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSD-------------------------DLTVKLW 124 (304)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEET-------------------------TSCEEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECC-------------------------CCeEEEE
Confidence 9999999999999999999999999999999999999 7789999999 9999999
Q ss_pred EecCCc-EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceee
Q 016185 182 NVQTGI-CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 260 (394)
Q Consensus 182 d~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (394)
|++++. ....+. +|...|.+++|+|.++.+|++|+.|++|++||++.... ....
T Consensus 125 d~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~----------------------~~~~ 179 (304)
T 2ynn_A 125 NWENNWALEQTFE---GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP----------------------NFTL 179 (304)
T ss_dssp EGGGTTEEEEEEC---CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC----------------------SEEE
T ss_pred ECCCCcchhhhhc---ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc----------------------ccee
Confidence 999874 445566 89999999999996678999999999999999987321 1223
Q ss_pred eecCCCceEEEEEe----CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeC
Q 016185 261 ASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 336 (394)
Q Consensus 261 ~~~~~~~i~~~~~~----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 336 (394)
...|...+..+.|. +.++++++.|+.|++||+++++ .+..+.+|...|.+++|+|++ .+|++|+.
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~---------~~~~~~~h~~~v~~~~~~p~~--~~l~s~s~ 248 (304)
T 2ynn_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS---------CVATLEGHMSNVSFAVFHPTL--PIIISGSE 248 (304)
T ss_dssp ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE---------EEEEEECCSSCEEEEEECSSS--SEEEEEET
T ss_pred ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc---------cceeeCCCCCCEEEEEECCCC--CEEEEEcC
Confidence 34566778888885 5699999999999999999775 678888999999999999999 69999999
Q ss_pred CCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC--EEEEeccCCeEEEEEcCC
Q 016185 337 EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS--TILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 337 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~dg~i~iwd~~~ 393 (394)
||.|++||+.+++ ....+. .|...+.+++|+|++. ++++|+.| .+.+|++..
T Consensus 249 Dg~i~iWd~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 249 DGTLKIWNSSTYK--VEKTLN--VGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp TSCEEEEETTTCC--EEEEEC--CSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred CCeEEEEECCCCc--eeeecc--CCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 9999999999874 667777 7788999999999875 57777654 577887754
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.4e-48 Score=336.02 Aligned_cols=290 Identities=19% Similarity=0.265 Sum_probs=254.5
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcE
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPF 100 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 100 (394)
..+..+.+++|.++|++++|+| ++++||+|+.|+ |+|||..+++....+. .|...|.+++|+ |+|. +
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~----d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-----~~~~~v~~~~~s--p~g~-~ 120 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCK----DKRRIVSSSQDGKVIVWDSFTTNKEHAVT-----MPCTWVMACAYA--PSGC-A 120 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECT----TSSEEEEEETTSEEEEEETTTCCEEEEEE-----CSSSCCCEEEEC--TTSS-E
T ss_pred ccEEEEEecCCCCeEEEEEECC----CCCEEEEEeCCCeEEEEECCCCCcceEEe-----cCCCCEEEEEEC--CCCC-E
Confidence 3566788999999999999999 789999999999 9999999988877776 566788888887 9999 9
Q ss_pred EEEeecCCeEEEEECCCC------eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeecc
Q 016185 101 LVAGGINGIIRVIDVSNE------KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 101 l~s~~~dg~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
+++|+.|+.+++|++... .....+.+|...|.+++|+| ++..|++++.
T Consensus 121 lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~------------------------- 174 (354)
T 2pbi_B 121 IACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASG------------------------- 174 (354)
T ss_dssp EEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEET-------------------------
T ss_pred EEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeC-------------------------
Confidence 999999999999998643 34677889999999999999 7788999999
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCC-CCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
|++|++||+++++.+..+. +|...|.+++|+|. ++++|++|+.||.|++||+++
T Consensus 175 D~~v~lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---------------------- 229 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSFH---GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS---------------------- 229 (354)
T ss_dssp TSEEEEEETTTCCEEEEEE---CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT----------------------
T ss_pred CCcEEEEeCCCCeEEEEEc---CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC----------------------
Confidence 9999999999999999998 89999999999873 357999999999999999998
Q ss_pred cccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccccc--CCCCCeEEEEEeecCCcc
Q 016185 254 VQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP--VPECDIWFIKFSCDFHYN 329 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~ 329 (394)
..++..+..|...|.+++|+ ++++++++.|++|++||++..+ .+..+. .+...+.+++|+|++ .
T Consensus 230 -~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~---------~~~~~~~~~~~~~~~~~~~s~~g--~ 297 (354)
T 2pbi_B 230 -GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR---------EVAIYSKESIIFGASSVDFSLSG--R 297 (354)
T ss_dssp -CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EEEEECCTTCCSCEEEEEECTTS--S
T ss_pred -CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---------EEEEEcCCCcccceeEEEEeCCC--C
Confidence 34567788999999999997 7899999999999999998764 222222 234578999999999 6
Q ss_pred eEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 330 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 330 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
+|++|+.|+.|++||+.+++ .+..+. +|...|++++|+|++++|++|+.||.|+||+
T Consensus 298 ~l~~g~~d~~i~vwd~~~~~--~~~~l~--~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 298 LLFAGYNDYTINVWDVLKGS--RVSILF--GHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEETTSCEEEEETTTCS--EEEEEC--CCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCcEEEEECCCCc--eEEEEE--CCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999998874 556666 8999999999999999999999999999996
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.4e-49 Score=348.22 Aligned_cols=301 Identities=20% Similarity=0.306 Sum_probs=257.1
Q ss_pred cccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCc
Q 016185 21 REYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIP 99 (394)
Q Consensus 21 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (394)
..+...+.|++|.++|++++|+| ++++|++|+.|+ |+|||+.+++....+. .|...|.+++|+ |+|+
T Consensus 54 ~~~~~~~~l~gH~~~V~~~~~sp----~~~~l~s~s~D~~v~iWd~~~~~~~~~~~-----~h~~~v~~~~~s--~~g~- 121 (380)
T 3iz6_a 54 TDLVCCRTLQGHSGKVYSLDWTP----EKNWIVSASQDGRLIVWNALTSQKTHAIK-----LHCPWVMECAFA--PNGQ- 121 (380)
T ss_dssp CCCEEEEEECCCSSCEEEEEECT----TSSCEEEEETTSEEEEEETTTTEEEEEEE-----CCCTTCCCCEEC--TTSS-
T ss_pred ceeEEeecccccccEEEEEEEcC----CCCEEEEEeCCCeEEEEECCCCccceEEe-----cCCCCEEEEEEC--CCCC-
Confidence 34567788999999999999999 789999999999 9999999999888887 577788888887 9999
Q ss_pred EEEEeecCCeEEEEECCCC-------eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeee
Q 016185 100 FLVAGGINGIIRVIDVSNE-------KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRV 172 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~ 172 (394)
+|++|+.|+.+++||+.+. .....+.+|.+.|.++.|+|+++..|++|+.
T Consensus 122 ~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~----------------------- 178 (380)
T 3iz6_a 122 SVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG----------------------- 178 (380)
T ss_dssp EEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT-----------------------
T ss_pred EEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC-----------------------
Confidence 9999999999999998653 2345678999999999999976778999999
Q ss_pred ccCCcEEEEEecCCcEEEEeec--cCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCC
Q 016185 173 GQDESVRLWNVQTGICILIFAG--AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 173 ~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
|++|++||+++++.+..+.. ..+|...|.+++|++.++++|++|+.|+.|++||++..
T Consensus 179 --D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~------------------ 238 (380)
T 3iz6_a 179 --DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT------------------ 238 (380)
T ss_dssp --TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT------------------
T ss_pred --CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC------------------
Confidence 99999999999998887732 13789999999998767899999999999999999852
Q ss_pred ccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC-------CCCCeEEEE
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-------PECDIWFIK 321 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~ 321 (394)
..++..+.+|...|.+++|+ +++|++++.|++|++||+++++. +..+.. +...+++++
T Consensus 239 ----~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~ 305 (380)
T 3iz6_a 239 ----SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ---------LQVYNREPDRNDNELPIVTSVA 305 (380)
T ss_dssp ----CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE---------EEEECCCCSSSCCSSCSCSEEE
T ss_pred ----CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE---------EEEecccccccccccCceEEEE
Confidence 23566788999999999998 78999999999999999998752 222221 223588999
Q ss_pred EeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec--cCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 322 FSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS--HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 322 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
|+|++ .+|++|+.||.|++||+..++ ....+. ..+|.+.|++++|+|++++|++|+.||.|+||++..
T Consensus 306 ~s~~g--~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 306 FSISG--RLLFAGYSNGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp ECSSS--SEEEEECTTSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ECCCC--CEEEEEECCCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 99999 699999999999999998875 344442 248999999999999999999999999999999864
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=332.99 Aligned_cols=313 Identities=17% Similarity=0.247 Sum_probs=252.6
Q ss_pred ccceeeeeccCcc-ceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCc
Q 016185 22 EYRVTNKLQEGKR-PLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIP 99 (394)
Q Consensus 22 ~~~~~~~~~~h~~-~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (394)
.+.+...+.+|.+ .|++++|+| +|++||+|+.|+ |+|||+.++....... ...+|...|.+++|+ |+|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp----~g~~las~~~D~~i~iw~~~~~~~~~~~~--~~~~h~~~v~~~~~s--p~g~- 74 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNP----AGTLLASCGGDRRIRIWGTEGDSWICKSV--LSEGHQRTVRKVAWS--PCGN- 74 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECT----TSSCEEEEETTSCEEEEEEETTEEEEEEE--ECSSCSSCEEEEEEC--TTSS-
T ss_pred cEEEeeeecCCCCCcEEEEEECC----CCCEEEEEcCCCeEEEEEcCCCcceeeee--eccccCCcEEEEEEC--CCCC-
Confidence 4567788999988 999999999 799999999998 9999998776432221 123688999999998 9999
Q ss_pred EEEEeecCCeEEEEECCCC--eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCc
Q 016185 100 FLVAGGINGIIRVIDVSNE--KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDES 177 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~ 177 (394)
+|++|+.|+.|++||+..+ +++..+.+|...|.+++|+| ++++|++++. |+.
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~-------------------------D~~ 128 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSR-------------------------DKS 128 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEET-------------------------TSC
T ss_pred EEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEEC-------------------------CCe
Confidence 9999999999999998766 46778889999999999999 7899999999 999
Q ss_pred EEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccc
Q 016185 178 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 257 (394)
Q Consensus 178 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (394)
|++||++++.....+....+|...|.+++|+| ++.+|++++.|+.|++||.+... ...
T Consensus 129 v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~---------------------~~~ 186 (345)
T 3fm0_A 129 VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDD---------------------WVC 186 (345)
T ss_dssp EEEEEECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTE---------------------EEE
T ss_pred EEEEECCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCC---------------------EEE
Confidence 99999987654332222238999999999999 99999999999999999998732 123
Q ss_pred eeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCC------CcceecccccC-CCCCeEEEEEeecCCc
Q 016185 258 VFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE------GTADILQKYPV-PECDIWFIKFSCDFHY 328 (394)
Q Consensus 258 ~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~------~~~~~~~~~~~-~~~~i~~~~~~~~~~~ 328 (394)
...+.+|...|.+++|+ +++|++++.|++|++||.......... .....+..+.. |...|++++|+|++
T Consensus 187 ~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-- 264 (345)
T 3fm0_A 187 CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT-- 264 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT--
T ss_pred EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC--
Confidence 56778999999999998 789999999999999997543221110 01122333333 77889999999999
Q ss_pred ceEEEEeCCCcEEEEEecCCCc----eeeEEe-ccCCccCCeeEEEeccCC-CEEEEeccCCeEEEEEcCC
Q 016185 329 NAAAIGNREGKIFVWELQSSPP----VLIARL-SHAQSKSPIRQTAMSYDG-STILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 329 ~~l~~~~~dg~i~iwd~~~~~~----~~~~~~-~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~ 393 (394)
..|++++.|+.|++|+...... ...... ...+|...|++++|+|++ .+||+|+.||.|++|++.+
T Consensus 265 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 265 GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 6899999999999999976431 111111 134899999999999997 5999999999999999875
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-48 Score=335.87 Aligned_cols=289 Identities=13% Similarity=0.130 Sum_probs=233.3
Q ss_pred ccCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeE----Eeeec--ccCCcccceEEEEEEEcCCCCcEEEE
Q 016185 30 QEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIA----ALQSY--VDEDKEESFYTVSWACNVDGIPFLVA 103 (394)
Q Consensus 30 ~~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~----~~~~~--~~~~~~~~v~~~~~~~~~~~~~~l~s 103 (394)
..|...|.+++|+| +|++|++++++.+++||........ ....+ ....++..|.+++|+ |++ .|++
T Consensus 27 ~~~~~~v~~~~fs~----dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~d~--~l~~ 98 (344)
T 4gqb_B 27 ACMERQLEAARYRS----DGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWV--GER--GILV 98 (344)
T ss_dssp SSCCSEEEEEEECT----TSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEE--TTT--EEEE
T ss_pred ccccCCEEEEEECC----CCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEe--CCC--eEEE
Confidence 45788899999999 8999999986668888732110000 00000 001345679999998 876 5889
Q ss_pred eecCCeEEEEECCCCeeEEE----EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEE
Q 016185 104 GGINGIIRVIDVSNEKLHKS----FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVR 179 (394)
Q Consensus 104 ~~~dg~i~vwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 179 (394)
|+.||.|+|||+.+++.... +.+|.+.|.+++|+| ++++|++|+. |++|+
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~-------------------------d~~i~ 152 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSK-------------------------DICIK 152 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEET-------------------------TSCEE
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeC-------------------------CCeEE
Confidence 99999999999998865443 448999999999999 8899999999 99999
Q ss_pred EEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccccccee
Q 016185 180 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 259 (394)
Q Consensus 180 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (394)
+||+++++.+..+. +|...|++++|+|++..+|++++.|++|++||+++++ +..
T Consensus 153 iwd~~~~~~~~~~~---~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-----------------------~~~ 206 (344)
T 4gqb_B 153 VWDLAQQVVLSSYR---AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK-----------------------PAS 206 (344)
T ss_dssp EEETTTTEEEEEEC---CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS-----------------------CEE
T ss_pred EEECCCCcEEEEEc---CcCCceEEEEecCCCCCceeeeccccccccccccccc-----------------------eee
Confidence 99999999999998 8999999999999344678999999999999999843 233
Q ss_pred ee--ecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEE
Q 016185 260 IA--SVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 334 (394)
Q Consensus 260 ~~--~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 334 (394)
.+ ..|...+.+++|+ ++++++|+.||.|++||+++++ .+..+..|...|++++|+|++. .+|++|
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~---------~~~~~~~h~~~v~~v~fsp~g~-~~lasg 276 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS---------CVLSSAVHSQCVTGLVFSPHSV-PFLASL 276 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----------CCEEEECCSSCEEEEEECSSSS-CCEEEE
T ss_pred eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc---------EEEEEcCCCCCEEEEEEccCCC-eEEEEE
Confidence 33 3456678899997 5689999999999999999876 5778889999999999999985 589999
Q ss_pred eCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC-EEEEeccCCeEEEEEcCC
Q 016185 335 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 335 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 393 (394)
+.|++|++||+.+++ +..+. +|.+.|++++|+|+++ +|++++.||+|++|++.+
T Consensus 277 s~D~~i~vwd~~~~~---~~~~~--~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 277 SEDCSLAVLDSSLSE---LFRSQ--AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp ETTSCEEEECTTCCE---EEEEC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred eCCCeEEEEECCCCc---EEEEc--CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 999999999998873 34455 8999999999999986 577999999999999864
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.8e-48 Score=339.29 Aligned_cols=290 Identities=16% Similarity=0.157 Sum_probs=233.2
Q ss_pred ccCccceeEEEEEeeCCCcceEEEEecC------Cc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEE
Q 016185 30 QEGKRPLYAVVFNFIDSRYFNVFATVGG------NR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLV 102 (394)
Q Consensus 30 ~~h~~~v~~i~~sp~~~~~~~~las~~~------d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 102 (394)
.+|.+.|++++||| ||++||+++. |+ |++|+..++.....+.... ..|...|.+++|+ |++. ++
T Consensus 39 ~~H~~~V~~v~fSp----DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~s--~d~~--~l 109 (357)
T 4g56_B 39 ACMEVQIGAVRYRR----DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAG-VQTEAGVTDVAWV--SEKG--IL 109 (357)
T ss_dssp -CCCSEEEEEEECS----SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEE-EECSSCEEEEEEE--TTTE--EE
T ss_pred ccccCCEEEEEECC----CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEeccc-CCCCCCEEEEEEc--CCCC--EE
Confidence 57999999999999 8999999997 55 8888877765433322111 1577889999998 8885 66
Q ss_pred EeecCCeEEEEECCCCeeEE----EEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcE
Q 016185 103 AGGINGIIRVIDVSNEKLHK----SFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESV 178 (394)
Q Consensus 103 s~~~dg~i~vwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i 178 (394)
+++.||.|+|||+.+++... ...+|...|.+++|+| ++++|++++. |+.|
T Consensus 110 ~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~-------------------------dg~v 163 (357)
T 4g56_B 110 VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGK-------------------------DFSV 163 (357)
T ss_dssp EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEET-------------------------TSCE
T ss_pred EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeC-------------------------CCeE
Confidence 78889999999998876432 3447999999999999 7899999999 9999
Q ss_pred EEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccce
Q 016185 179 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 258 (394)
Q Consensus 179 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (394)
++||+++++.+..+. +|...|++++|+|.+..++++++.||.|++||+++++. ...
T Consensus 164 ~iwd~~~~~~~~~~~---~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~---------------------~~~ 219 (357)
T 4g56_B 164 KVWDLSQKAVLKSYN---AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP---------------------ATR 219 (357)
T ss_dssp EEEETTTTEEEEEEC---CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC---------------------BCB
T ss_pred EEEECCCCcEEEEEc---CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce---------------------eee
Confidence 999999999999998 89999999999994446899999999999999988432 112
Q ss_pred eeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEe
Q 016185 259 FIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 259 ~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 335 (394)
.....|...+.+++|+ +.++++++.|+.|++||+++++ .+..+..|...|++++|+|++. .+|++|+
T Consensus 220 ~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~---------~~~~~~~~~~~v~~l~~sp~~~-~~lasgs 289 (357)
T 4g56_B 220 IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD---------SAQTSAVHSQNITGLAYSYHSS-PFLASIS 289 (357)
T ss_dssp CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG---------GCEEECCCSSCEEEEEECSSSS-CCEEEEE
T ss_pred eeeccccccccchhhhhcccceEEEeecccceeEEECCCCc---------EeEEEeccceeEEEEEEcCCCC-CEEEEEe
Confidence 2334567789999997 5689999999999999999876 5677888999999999999985 5899999
Q ss_pred CCCcEEEEEecCCCceeeEEeccCCccCCeeEEEecc-CCCEEEEeccCCeEEEEEcCC
Q 016185 336 REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY-DGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.|++|+|||+.+++ .+. .. +|.+.|++++|+| ++++|++++.||.|++|++..
T Consensus 290 ~D~~i~iwd~~~~~--~~~-~~--~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 290 EDCTVAVLDADFSE--VFR-DL--SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp TTSCEEEECTTSCE--EEE-EC--CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCCEEEEEECCCCc--EeE-EC--CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 99999999998873 333 33 7889999999998 799999999999999999864
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.7e-47 Score=326.14 Aligned_cols=294 Identities=20% Similarity=0.348 Sum_probs=247.6
Q ss_pred cccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc-----eeEEeeecccCCcccceEEEEEEEc
Q 016185 21 REYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG-----VIAALQSYVDEDKEESFYTVSWACN 94 (394)
Q Consensus 21 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~ 94 (394)
+.+.+..+|++|.++|++++|+|. .+++|++|+.|+ |++|++.... .+..+. +|...|.+++|+
T Consensus 5 ~~~~l~~~l~gH~~~V~~l~~~~~---~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~s-- 74 (319)
T 3frx_A 5 EVLVLRGTLEGHNGWVTSLATSAG---QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-----GHSHIVQDCTLT-- 74 (319)
T ss_dssp EEEEEEEEECCCSSCEEEEEECSS---CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-----CCSSCEEEEEEC--
T ss_pred eEEEEEEEEccccceEEEEEccCC---CccEEEEecCCccEEEecCCCCCccccccceEEe-----CCcccEEEEEEC--
Confidence 346677889999999999999982 358999999999 9999986432 234444 788999999988
Q ss_pred CCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeecc
Q 016185 95 VDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 95 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
|+++ +|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.
T Consensus 75 ~dg~-~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~------------------------- 127 (319)
T 3frx_A 75 ADGA-YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSR------------------------- 127 (319)
T ss_dssp TTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEET-------------------------
T ss_pred CCCC-EEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeC-------------------------
Confidence 9999 999999999999999999999999999999999999999 7899999999
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCC-----CCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCC
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS-----DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKF 249 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 249 (394)
|+.|++||++ ++.+..+. +|...|.++.+.|. ++..|++++.|+.|++||+++.
T Consensus 128 D~~i~vwd~~-~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~----------------- 186 (319)
T 3frx_A 128 DKTIKVWTIK-GQCLATLL---GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF----------------- 186 (319)
T ss_dssp TSCEEEEETT-SCEEEEEC---CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT-----------------
T ss_pred CCeEEEEECC-CCeEEEEe---ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc-----------------
Confidence 9999999996 55666666 79999999999982 2348999999999999999883
Q ss_pred CccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCC
Q 016185 250 PTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFH 327 (394)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (394)
.....+.+|...|.+++|+ +++|++++.||.|++||+.+.+ .+..+.. ...+.+++|+|++
T Consensus 187 ------~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~-~~~v~~~~~sp~~- 249 (319)
T 3frx_A 187 ------QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK---------AMYTLSA-QDEVFSLAFSPNR- 249 (319)
T ss_dssp ------EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE---------EEEEEEC-CSCEEEEEECSSS-
T ss_pred ------hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------EEEEecC-CCcEEEEEEcCCC-
Confidence 3456778899999999998 7899999999999999999775 4444444 4579999999999
Q ss_pred cceEEEEeCCCcEEEEEecCCCceeeEEec------cCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 328 YNAAAIGNREGKIFVWELQSSPPVLIARLS------HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 328 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.++++++. +.+++|++.... ....+. ...|...+.+++|+|||++|++|+.||.|+|||+.+
T Consensus 250 -~~la~~~~-~~i~v~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 250 -YWLAAATA-TGIKVFSLDPQY--LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp -SEEEEEET-TEEEEEEETTEE--EEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred -CEEEEEcC-CCcEEEEeCcCe--eeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 57777765 559999998753 333332 123567899999999999999999999999999875
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-47 Score=326.06 Aligned_cols=304 Identities=17% Similarity=0.234 Sum_probs=237.8
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc--eeEEeeecccCCcccceEEEEEEEcCCCC
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG--VIAALQSYVDEDKEESFYTVSWACNVDGI 98 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (394)
.+++.+.+++|.++|++++|+| + +||+++.|+ |++||+..+. .+..+. ...|...|.+++|+ |+++
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~----~--~las~~~D~~i~lw~~~~~~~~~~~~~~---~~~h~~~v~~v~~s--p~~~ 71 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQ----G--ILATGSTDRKIKLVSVKYDDFTLIDVLD---ETAHKKAIRSVAWR--PHTS 71 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEET----T--EEEEEESSSCEEEEECSSSCCEEEEEEC---TTCCCSCEEEEEEC--TTSS
T ss_pred ccccceeeccCCCceeeeccCC----C--EEEEEcCCCEEEEEEecCCCeEEEEEEe---cCCccCCEEEEEEC--CCCC
Confidence 4556778999999999999997 4 899999998 9999998753 233331 12488999999988 9998
Q ss_pred cEEEEeecCCeEEEEECCC-------CeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceee
Q 016185 99 PFLVAGGINGIIRVIDVSN-------EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLR 171 (394)
Q Consensus 99 ~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~ 171 (394)
+|++|+.|+.|++||+.. .+++..+.+|...|.+++|+| ++.+|++++.
T Consensus 72 -~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~---------------------- 127 (330)
T 2hes_X 72 -LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSR---------------------- 127 (330)
T ss_dssp -EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEET----------------------
T ss_pred -EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeC----------------------
Confidence 999999999999999853 356778889999999999999 7899999999
Q ss_pred eccCCcEEEEEecCC----cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCC
Q 016185 172 VGQDESVRLWNVQTG----ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPS 247 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 247 (394)
|+.|++||++.. +.+..+. +|...|.+++|+| ++.+|++++.|++|++||.....
T Consensus 128 ---D~~v~iwd~~~~~~~~~~~~~~~---~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~-------------- 186 (330)
T 2hes_X 128 ---DKSVWIWETDESGEEYECISVLQ---EHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDD-------------- 186 (330)
T ss_dssp ---TSCEEEEECCTTCCCCEEEEEEC---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTE--------------
T ss_pred ---CCEEEEEeccCCCCCeEEEEEec---cCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCC--------------
Confidence 999999999532 4556666 8999999999999 99999999999999999987631
Q ss_pred CCCccccccceeeeecCCCceEEEEEeC----cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC-CCCCeEEEEE
Q 016185 248 KFPTKYVQFPVFIASVHSNYVDCNRWLG----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIWFIKF 322 (394)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~ 322 (394)
..++..+.+|...|.+++|++ .++++++.|++|++||++...... .........+.. |...|.+++|
T Consensus 187 -------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~ 258 (330)
T 2hes_X 187 -------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDD-QQEWVCEAILPDVHKRQVYNVAW 258 (330)
T ss_dssp -------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTS-CEEEEEEEECCSCCSSCEEEEEE
T ss_pred -------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccc-cceeEEeeecccccccceEEEEE
Confidence 135677889999999999983 479999999999999997653211 001123334444 7889999999
Q ss_pred eecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccC-CeeEEEecc--CCCEEEEeccCCeEEEEEcCC
Q 016185 323 SCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKS-PIRQTAMSY--DGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 323 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-~v~~~~~s~--~~~~l~s~~~dg~i~iwd~~~ 393 (394)
++++ +|++++.||.|++||..+++....... ..+|.. .|.+++|+| ++++||+|+.||.|+|||+++
T Consensus 259 s~~~---~l~s~~~dg~v~iw~~~~~~~~~~~~~-~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 259 GFNG---LIASVGADGVLAVYEEVDGEWKVFAKR-ALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CTTS---CEEEEETTSCEEEEEEETTEEEEEEEE-SCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cCCC---EEEEEeCCCEEEEEEcCCCceEEEecc-ccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 9665 799999999999999987642223222 126766 899999999 789999999999999999875
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.6e-46 Score=348.66 Aligned_cols=339 Identities=15% Similarity=0.246 Sum_probs=271.8
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeee--cccC
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQS--YVDE 80 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~--~~~~ 80 (394)
.++|..+....+.. ..+.+....+.+|.+.|++++|+| ++++||+++.|+ |++||+.+++.+..+.. ....
T Consensus 163 l~s~s~D~~v~lwd--~~~~~~~~~l~~H~~~V~~v~fsp----dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~ 236 (611)
T 1nr0_A 163 IISGSDDNTVAIFE--GPPFKFKSTFGEHTKFVHSVRYNP----DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV 236 (611)
T ss_dssp EEEEETTSCEEEEE--TTTBEEEEEECCCSSCEEEEEECT----TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSC
T ss_pred EEEEeCCCeEEEEE--CCCCeEeeeeccccCceEEEEECC----CCCEEEEEECCCcEEEEECCCCcEeeeecccccccc
Confidence 56677777766664 345667788999999999999999 799999999999 99999999988776632 1112
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEE-------------------------------------
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS------------------------------------- 123 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~------------------------------------- 123 (394)
.|.+.|.+++|+ |+|+ +|++++.|++|++||+.+++++.+
T Consensus 237 ~h~~~V~~v~~s--pdg~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 237 AHSGSVFGLTWS--PDGT-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp SSSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred ccCCCEEEEEEC--CCCC-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence 588999999998 9999 999999999999999988765443
Q ss_pred ------EEecCCceeEEEEcCCCCcEEEEcee--eeEEeeccc---------------eeeeeeeccceeeeccCCcEEE
Q 016185 124 ------FVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLSL---------------ICLLLFIRSNCLRVGQDESVRL 180 (394)
Q Consensus 124 ------~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~~---------------~~~~~~~~~~~~~~~~d~~i~v 180 (394)
+.+|...|.+++|+| ++.+|++++. .+++|+... .++.+.+++.+++++.|+.+++
T Consensus 314 ~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~ 392 (611)
T 1nr0_A 314 GSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV 392 (611)
T ss_dssp TEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEE
Confidence 347889999999999 7889999886 899998632 2233445678999999999999
Q ss_pred EEecCCcE-----------------------------------------EEEeeccCCCcccEEEEEecCCCCeeEEeec
Q 016185 181 WNVQTGIC-----------------------------------------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCG 219 (394)
Q Consensus 181 wd~~~~~~-----------------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~ 219 (394)
|++..+.. +..+ .|...+.+++|+| ++++|++|+
T Consensus 393 w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~----~~~~~v~~va~sp-dg~~lasgs 467 (611)
T 1nr0_A 393 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV----PISYNSSCVALSN-DKQFVAVGG 467 (611)
T ss_dssp ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE----ECSSCEEEEEECT-TSCEEEEEE
T ss_pred eecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee----ecCCCceEEEEeC-CCCEEEEeC
Confidence 99754321 1111 1456789999999 999999999
Q ss_pred cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCC
Q 016185 220 MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQ 297 (394)
Q Consensus 220 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~ 297 (394)
.|++|++||+..... ..... ..|...|.+++|+ +++|++++.|++|++||+.+...
T Consensus 468 ~D~~v~lwd~~~~~~---------------------~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~ 525 (611)
T 1nr0_A 468 QDSKVHVYKLSGASV---------------------SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE 525 (611)
T ss_dssp TTSEEEEEEEETTEE---------------------EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE
T ss_pred CCCeEEEEEccCCce---------------------eeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCc
Confidence 999999999987321 11223 6799999999998 88999999999999999986221
Q ss_pred CCCCCcceecc--cccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCc-cCCeeEEEeccCC
Q 016185 298 SPGEGTADILQ--KYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQS-KSPIRQTAMSYDG 374 (394)
Q Consensus 298 ~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~ 374 (394)
... .+..|...|++++|+|++ .+|++|+.|++|++||+.++.......+. +| ...|++++|+|++
T Consensus 526 --------~~~~~~~~~H~~~V~~v~fspdg--~~lasgs~D~~v~lW~~~~~~~~~~~~~~--~h~~~~v~~v~fs~d~ 593 (611)
T 1nr0_A 526 --------LAHTNSWTFHTAKVACVSWSPDN--VRLATGSLDNSVIVWNMNKPSDHPIIIKG--AHAMSSVNSVIWLNET 593 (611)
T ss_dssp --------ESCCCCCCCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTCTTSCCEEETT--SSTTSCEEEEEEEETT
T ss_pred --------eeeeeeeeecccceeEEEECCCC--CEEEEEECCCcEEEEECCCcccccchhhc--cCcccCeeEEEEcCCC
Confidence 222 234588999999999999 69999999999999999876532324454 78 7999999999999
Q ss_pred CEEEEeccCCeEEEEEcC
Q 016185 375 STILSCCEDGAIWRWDAI 392 (394)
Q Consensus 375 ~~l~s~~~dg~i~iwd~~ 392 (394)
+ |++++.|++|++|++.
T Consensus 594 ~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 594 T-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp E-EEEEETTSCEEEEECC
T ss_pred E-EEEecCCCCEEEEecc
Confidence 8 9999999999999983
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-46 Score=320.97 Aligned_cols=293 Identities=24% Similarity=0.415 Sum_probs=254.3
Q ss_pred ccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCC
Q 016185 20 KREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGI 98 (394)
Q Consensus 20 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (394)
.+.+.+...+.+|.++|++++|+| ++++|++++.|+ |++|+..+++....+. .|...|.+++|+ |+++
T Consensus 10 ~~~~~~~~~~~gh~~~v~~~~~s~----~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-----~h~~~v~~~~~~--~~~~ 78 (312)
T 4ery_A 10 KPNYALKFTLAGHTKAVSSVKFSP----NGEWLASSSADKLIKIWGAYDGKFEKTIS-----GHKLGISDVAWS--SDSN 78 (312)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECT----TSSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEEC--TTSS
T ss_pred CCCceeEEEEcccCCcEEEEEECC----CCCEEEEeeCCCeEEEEeCCCcccchhhc-----cCCCceEEEEEc--CCCC
Confidence 345778888999999999999999 789999999998 9999999988877776 688899999988 9998
Q ss_pred cEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcE
Q 016185 99 PFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESV 178 (394)
Q Consensus 99 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i 178 (394)
+|++++.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++. |+.|
T Consensus 79 -~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~-------------------------d~~i 131 (312)
T 4ery_A 79 -LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSF-------------------------DESV 131 (312)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEET-------------------------TSCE
T ss_pred -EEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeC-------------------------CCcE
Confidence 999999999999999999999999999999999999999 7889999999 9999
Q ss_pred EEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccce
Q 016185 179 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 258 (394)
Q Consensus 179 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (394)
++||+++++.+..+. .|..+|.+++|+| ++.+|++++.||.|++||+++.+ .+
T Consensus 132 ~iwd~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~-----------------------~~ 184 (312)
T 4ery_A 132 RIWDVKTGKCLKTLP---AHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQ-----------------------CL 184 (312)
T ss_dssp EEEETTTCCEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC-----------------------EE
T ss_pred EEEECCCCEEEEEec---CCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCc-----------------------ee
Confidence 999999999998887 7999999999999 99999999999999999998833 23
Q ss_pred ee-eecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeE--EEEEe-ecCCcceEE
Q 016185 259 FI-ASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW--FIKFS-CDFHYNAAA 332 (394)
Q Consensus 259 ~~-~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~-~~~~~~~l~ 332 (394)
.. ...+...+..++|+ ++++++++.|+.|++||+++++ .+..+..|..... ...++ +++ .+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ 253 (312)
T 4ery_A 185 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK---------CLKTYTGHKNEKYCIFANFSVTGG--KWIV 253 (312)
T ss_dssp EEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE---------EEEEECSSCCSSSCCCEEEECSSS--CEEE
T ss_pred eEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc---------EEEEEEecCCceEEEEEEEEeCCC--cEEE
Confidence 32 23456678899997 7899999999999999998775 4555555544322 23444 444 6899
Q ss_pred EEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEec--cCCeEEEEEcC
Q 016185 333 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC--EDGAIWRWDAI 392 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~ 392 (394)
+|+.||.|++||+.+++ .+..+. +|...|.+++|+|++++|++++ .|+.|++|+..
T Consensus 254 sg~~dg~i~vwd~~~~~--~~~~~~--~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 254 SGSEDNLVYIWNLQTKE--IVQKLQ--GHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ECCTTSCEEEEETTTCC--EEEEEC--CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EECCCCEEEEEECCCch--hhhhhh--ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999998874 667777 8999999999999999999986 69999999964
No 14
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.8e-47 Score=332.97 Aligned_cols=336 Identities=41% Similarity=0.783 Sum_probs=266.0
Q ss_pred eccCccceeEEEEEeeCC-CcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCC--CCcEEEEee
Q 016185 29 LQEGKRPLYAVVFNFIDS-RYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD--GIPFLVAGG 105 (394)
Q Consensus 29 ~~~h~~~v~~i~~sp~~~-~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~l~s~~ 105 (394)
..+|.++|++++|+|... .+..++++++.+.|++||+.+++.+..++.+....|...|.+++|+++.. ++ +|++|+
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~ 92 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP-LLAVAG 92 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE-EEEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC-EEEEec
Confidence 358999999999998311 12346777766679999999999888888877767889999999994322 66 999999
Q ss_pred cCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC
Q 016185 106 INGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT 185 (394)
Q Consensus 106 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~ 185 (394)
.||.|++||+.+++.+..+.+|...|.+++|+|.++.+|++++. ||.|++||+++
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-------------------------dg~i~iwd~~~ 147 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-------------------------DHALRLWNIQT 147 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-------------------------TSCEEEEETTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-------------------------CCeEEEEEeec
Confidence 99999999999999999999999999999999977789999999 99999999999
Q ss_pred CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccc--cccCCCCCC---CCccccccceee
Q 016185 186 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS--FTWTDLPSK---FPTKYVQFPVFI 260 (394)
Q Consensus 186 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~ 260 (394)
++.+..+....+|...|.+++|+| ++.+|++++.||.|++||+++.+...... ..+.+.... ............
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred CeEEEEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 999888843337999999999999 99999999999999999999854321110 111110000 001111122345
Q ss_pred eecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCC-----CCCCcceecccccCCCCCeEEEEEeec--CCcceEEE
Q 016185 261 ASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQS-----PGEGTADILQKYPVPECDIWFIKFSCD--FHYNAAAI 333 (394)
Q Consensus 261 ~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~l~~ 333 (394)
...|...|.+++|+++++++++.|+.|++||+.+.+.. ........+..+..|...|++++|+|+ + .+|++
T Consensus 227 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~--~~l~~ 304 (366)
T 3k26_A 227 RDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ--KMLAL 304 (366)
T ss_dssp CSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS--SEEEE
T ss_pred ccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC--cEEEE
Confidence 55699999999999999999999999999999876531 111122346677788889999999999 6 79999
Q ss_pred EeCCCcEEEEEecCCCce--eeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 334 GNREGKIFVWELQSSPPV--LIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 334 ~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
++.||.|++||+.+++.. ....+....|...|++++|+|++++|++++.||.|++||+.+
T Consensus 305 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 305 GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 999999999999987543 334555223379999999999999999999999999999864
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.4e-46 Score=324.69 Aligned_cols=298 Identities=17% Similarity=0.269 Sum_probs=243.4
Q ss_pred cccceeeeeccCccceeEEEE-----EeeCCCcceEEEEecCCc-EEEEEcCCCc-------eeEEeeecccCCcccceE
Q 016185 21 REYRVTNKLQEGKRPLYAVVF-----NFIDSRYFNVFATVGGNR-VTVYQCLEGG-------VIAALQSYVDEDKEESFY 87 (394)
Q Consensus 21 ~~~~~~~~~~~h~~~v~~i~~-----sp~~~~~~~~las~~~d~-i~vw~~~~~~-------~~~~~~~~~~~~~~~~v~ 87 (394)
..+++...|++|.+.|++++| +| .++++|++|+.|+ |++||+.+++ ....+. +|...|.
T Consensus 9 ~~~~~~~~l~gH~~~V~~~~~~~s~~~~---~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-----~h~~~V~ 80 (343)
T 2xzm_R 9 IQVVKRGILEGHSDWVTSIVAGFSQKEN---EDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-----GHNHFVS 80 (343)
T ss_dssp EEEEEEEEEECCSSCEEEEEECCCSSTT---CCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-----CCSSCEE
T ss_pred eEeeeeeeeccchhhhhheeeEEEeecC---CCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc-----cCCCceE
Confidence 345667789999999999999 44 2688999999998 9999987543 233333 6889999
Q ss_pred EEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeecc
Q 016185 88 TVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRS 167 (394)
Q Consensus 88 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~ 167 (394)
+++|+ |++. ++++|+.|+.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.
T Consensus 81 ~~~~~--~~~~-~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~------------------ 138 (343)
T 2xzm_R 81 DLALS--QENC-FAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGA------------------ 138 (343)
T ss_dssp EEEEC--SSTT-EEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEET------------------
T ss_pred EEEEC--CCCC-EEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcC------------------
Confidence 99988 8998 999999999999999999999999999999999999999 7889999999
Q ss_pred ceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCC----------eeEEeeccCCcEEEEEccccceeec
Q 016185 168 NCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI----------YRIASCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 168 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~l~s~~~dg~v~iwd~~~~~~~~~ 237 (394)
|+.|++||+. ++.........+|...|.+++|+| ++ .+|++++.||.|++||...
T Consensus 139 -------d~~i~~wd~~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~------ 203 (343)
T 2xzm_R 139 -------EREIKLWNIL-GECKFSSAEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTNF------ 203 (343)
T ss_dssp -------TSCEEEEESS-SCEEEECCTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETTT------
T ss_pred -------CCEEEEEecc-CCceeeeecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCCC------
Confidence 9999999997 444444433346889999999999 65 6899999999999999433
Q ss_pred cccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCC
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC 315 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
.....+..|...|.+++|+ +++|++++.||.|++||+..... ....+ .+..
T Consensus 204 ------------------~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~--------~~~~~-~~~~ 256 (343)
T 2xzm_R 204 ------------------QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY--------PQREF-DAGS 256 (343)
T ss_dssp ------------------EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS--------CSEEE-ECSS
T ss_pred ------------------ceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc--------cceee-cCCC
Confidence 2355678899999999998 78999999999999999954431 11222 2345
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec---------cCCccCCeeEEEeccCCCEEEEeccCCeE
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS---------HAQSKSPIRQTAMSYDGSTILSCCEDGAI 386 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 386 (394)
.|.+++|+|++ .+++ ++.|+.|++||+.+++...+..+. ..+|...|.+++|+|++++|++|+.||.|
T Consensus 257 ~v~~v~~sp~~--~~la-~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v 333 (343)
T 2xzm_R 257 TINQIAFNPKL--QWVA-VGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVI 333 (343)
T ss_dssp CEEEEEECSSS--CEEE-EEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEE
T ss_pred cEEEEEECCCC--CEEE-EECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceE
Confidence 69999999998 4565 456888999999887544433433 12678899999999999999999999999
Q ss_pred EEEEcCC
Q 016185 387 WRWDAIP 393 (394)
Q Consensus 387 ~iwd~~~ 393 (394)
++|++++
T Consensus 334 ~~w~~~~ 340 (343)
T 2xzm_R 334 RTFSFET 340 (343)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999864
No 16
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.7e-46 Score=328.72 Aligned_cols=304 Identities=20% Similarity=0.311 Sum_probs=246.8
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccC-------------CcccceEEEEEEEcCCC
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDE-------------DKEESFYTVSWACNVDG 97 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~ 97 (394)
+|.+.|++++|+| +|++||+++++.+++|++.+++.+..+..+... .+...|.+++|+ |+|
T Consensus 62 ~h~~~V~~v~fsp----dg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s--~dg 135 (393)
T 1erj_A 62 DHTSVVCCVKFSN----DGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS--PDG 135 (393)
T ss_dssp ECSSCCCEEEECT----TSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC--TTS
T ss_pred CCCCEEEEEEECC----CCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEEC--CCC
Confidence 6999999999999 799999998766999999999887776643211 122347788877 999
Q ss_pred CcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCc
Q 016185 98 IPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDES 177 (394)
Q Consensus 98 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~ 177 (394)
+ +|++|+.|+.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++. |+.
T Consensus 136 ~-~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~-------------------------d~~ 188 (393)
T 1erj_A 136 K-FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSG-------------------------DRT 188 (393)
T ss_dssp S-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEET-------------------------TSE
T ss_pred C-EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecC-------------------------CCc
Confidence 9 999999999999999999999999999999999999999 7789999999 999
Q ss_pred EEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccc
Q 016185 178 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 257 (394)
Q Consensus 178 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (394)
|++||+++++....+. +...+.+++|+|.++.+|++|+.|+.|++||++++...... ...
T Consensus 189 v~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~----------------~~~ 248 (393)
T 1erj_A 189 VRIWDLRTGQCSLTLS----IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL----------------DSE 248 (393)
T ss_dssp EEEEETTTTEEEEEEE----CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE----------------C--
T ss_pred EEEEECCCCeeEEEEE----cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee----------------ccc
Confidence 9999999999888876 67889999999877899999999999999999884321100 001
Q ss_pred eeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCC---CcceecccccCCCCCeEEEEEeecCCcceEE
Q 016185 258 VFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE---GTADILQKYPVPECDIWFIKFSCDFHYNAAA 332 (394)
Q Consensus 258 ~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 332 (394)
.....+|...|.+++|+ ++++++++.|+.|++||+++....... ........+.+|...|.+++|+|++ .+|+
T Consensus 249 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~ 326 (393)
T 1erj_A 249 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND--EYIL 326 (393)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG--CEEE
T ss_pred ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC--CEEE
Confidence 12235799999999997 789999999999999999875421110 0112345667888999999999999 6899
Q ss_pred EEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEecc------CCCEEEEeccCCeEEEEEcCC
Q 016185 333 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY------DGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+|+.|+.|++||+.+++ .+..+. +|...|.+++|++ ++++|++|+.||.|+||++..
T Consensus 327 sgs~D~~v~iwd~~~~~--~~~~l~--~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 327 SGSKDRGVLFWDKKSGN--PLLMLQ--GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEETTSEEEEEETTTCC--EEEEEE--CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEeCCCeEEEEECCCCe--EEEEEC--CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 99999999999999885 566677 8999999999986 688999999999999999863
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.7e-46 Score=345.09 Aligned_cols=337 Identities=13% Similarity=0.142 Sum_probs=261.9
Q ss_pred eeccCccceeEEEEEeeCCCcce-EEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFN-VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~-~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
.+.+|.+.|++++|+| ++. +|++++.|+ |++||..+++.+..+. .|...|.+++|+ |+|+ +|++|+
T Consensus 142 ~l~gh~~~v~~v~f~p----~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-----~H~~~V~~v~fs--pdg~-~las~s 209 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKP----SRPFRIISGSDDNTVAIFEGPPFKFKSTFG-----EHTKFVHSVRYN--PDGS-LFASTG 209 (611)
T ss_dssp CCCCCSSCEEEEEECS----SSSCEEEEEETTSCEEEEETTTBEEEEEEC-----CCSSCEEEEEEC--TTSS-EEEEEE
T ss_pred eecCCCCCceEEEECC----CCCeEEEEEeCCCeEEEEECCCCeEeeeec-----cccCceEEEEEC--CCCC-EEEEEE
Confidence 4567778888888887 444 699999998 9999988888777776 688899999988 9999 999999
Q ss_pred cCCeEEEEECCCCeeEEEEE-------ecCCceeEEEEcCCCCcEEEEcee--eeEEeeccce----------------e
Q 016185 106 INGIIRVIDVSNEKLHKSFV-------GHGDSINEIRTQPLKPSLVVSASK--VIIISSLSLI----------------C 160 (394)
Q Consensus 106 ~dg~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~~~----------------~ 160 (394)
.|+.|++||+.+++....+. +|.+.|.+++|+| ++.+|++++. .+++|+..-. .
T Consensus 210 ~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~ 288 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 288 (611)
T ss_dssp TTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEE
T ss_pred CCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeE
Confidence 99999999999999888884 7999999999999 7789999886 8999987321 1
Q ss_pred eeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccc-
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS- 239 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~- 239 (394)
.+.+....+++++.|+.+++||.+.++....+. +|...|++++|+| ++++|++++.|++|++||+.+++......
T Consensus 289 ~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~---gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~ 364 (611)
T 1nr0_A 289 GIIWTKQALVSISANGFINFVNPELGSIDQVRY---GHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPD 364 (611)
T ss_dssp EEEECSSCEEEEETTCCEEEEETTTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSC
T ss_pred EEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEc---CCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeeccc
Confidence 122356678999999999999999888777777 8999999999999 99999999999999999998754321100
Q ss_pred --------cc------------------cCCCCCCCCc----------ccc-----------------------ccceee
Q 016185 240 --------FT------------------WTDLPSKFPT----------KYV-----------------------QFPVFI 260 (394)
Q Consensus 240 --------~~------------------~~~~~~~~~~----------~~~-----------------------~~~~~~ 260 (394)
+. |......... ... ...+..
T Consensus 365 ~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~ 444 (611)
T 1nr0_A 365 VHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTE 444 (611)
T ss_dssp SCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEE
T ss_pred CCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceee
Confidence 00 0000000000 000 000111
Q ss_pred eecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCC
Q 016185 261 ASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 338 (394)
Q Consensus 261 ~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 338 (394)
+ .|...+.+++|+ ++++++++.|+.|++||+..... ..+.. ..|...|++++|+|++ .+|++++.|+
T Consensus 445 ~-~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~-------~~~~~-~~h~~~v~~v~fspdg--~~las~s~d~ 513 (611)
T 1nr0_A 445 V-PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV-------SEVKT-IVHPAEITSVAFSNNG--AFLVATDQSR 513 (611)
T ss_dssp E-ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE-------EEEEE-EECSSCEEEEEECTTS--SEEEEEETTS
T ss_pred e-ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCce-------eeeec-cCCCCceEEEEECCCC--CEEEEEcCCC
Confidence 1 256678899998 88999999999999999976431 11233 5688899999999999 6999999999
Q ss_pred cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 339 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.|++||+.+.. ..........|...|.+++|+||+++||+|+.|++|++||+.+
T Consensus 514 ~v~~w~~~~~~-~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 514 KVIPYSVANNF-ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp CEEEEEGGGTT-EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred CEEEEEcCCCC-ceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 99999998732 2222211225889999999999999999999999999999864
No 18
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.8e-44 Score=312.85 Aligned_cols=305 Identities=18% Similarity=0.274 Sum_probs=249.0
Q ss_pred cccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcC
Q 016185 17 PSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNV 95 (394)
Q Consensus 17 ~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 95 (394)
....+.+.+..+|+||.+.|++|+|+|+ .+++||||+.|+ |+|||+.+++...........+|...|.+++|+ |
T Consensus 22 ~~~~~~~~l~~tL~GH~~~V~~v~~sp~---~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s--~ 96 (340)
T 4aow_A 22 SMMTEQMTLRGTLKGHNGWVTQIATTPQ---FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVIS--S 96 (340)
T ss_dssp ----CEEEEEEEECCCSSCEEEEEECTT---CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEEC--T
T ss_pred EccCCceEEEEEECCccCCEEEEEEeCC---CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEEC--C
Confidence 3344667788899999999999999992 368999999998 999999876532222211122788999999988 9
Q ss_pred CCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 96 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
+|+ +|++++.|+.|++|+............+...+..+.+++ .+.+|++++. |
T Consensus 97 dg~-~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~-------------------------d 149 (340)
T 4aow_A 97 DGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSR-------------------------D 149 (340)
T ss_dssp TSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEET-------------------------T
T ss_pred CCC-EEEEEcccccceEEeecccceeeeecCCCCceeEEEEee-cCccceeecC-------------------------C
Confidence 999 999999999999999999988888888889999999999 7789999999 9
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCC-CeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccc
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 254 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (394)
+.+++||+.......... .+|...+..++|++.. ..++++++.|+.|++||+++
T Consensus 150 ~~~~~~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~----------------------- 204 (340)
T 4aow_A 150 KTIKLWNTLGVCKYTVQD--ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN----------------------- 204 (340)
T ss_dssp SCEEEECTTSCEEEEECS--SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-----------------------
T ss_pred CeEEEEEeCCCceEEEEe--ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC-----------------------
Confidence 999999987665443322 3789999999998722 35678999999999999998
Q ss_pred ccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEE
Q 016185 255 QFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 332 (394)
Q Consensus 255 ~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 332 (394)
...+..+.+|...|.+++|+ +++|++++.|+.|++||+++.+ .+..+.. ...+.++.|+|++ .++
T Consensus 205 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~---------~~~~~~~-~~~v~~~~~~~~~---~~~ 271 (340)
T 4aow_A 205 CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK---------HLYTLDG-GDIINALCFSPNR---YWL 271 (340)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE---------EEEEEEC-SSCEEEEEECSSS---SEE
T ss_pred CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc---------eeeeecC-CceEEeeecCCCC---cee
Confidence 34567788899999999998 7899999999999999999775 4444444 3579999999987 467
Q ss_pred EEeCCCcEEEEEecCCCceeeEEec-------cCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 333 IGNREGKIFVWELQSSPPVLIARLS-------HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+++.|+.|++||++.+. .+..+. ..+|...|++++|+|++++|++|+.||.|+|||+++
T Consensus 272 ~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 272 CAATGPSIKIWDLEGKI--IVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp EEEETTEEEEEETTTTE--EEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred eccCCCEEEEEECCCCe--EEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 77789999999998763 333322 236889999999999999999999999999999975
No 19
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.4e-44 Score=331.96 Aligned_cols=323 Identities=22% Similarity=0.322 Sum_probs=272.1
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCc
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDK 82 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~ 82 (394)
.++|..+....+... ..+....+.+|...|++++|+| +++++++++.++ |++|+. +++.+..+. .|
T Consensus 236 l~~~~~d~~i~~w~~---~~~~~~~~~~~~~~v~~v~~~~----d~~~l~~~~~d~~i~~w~~-~~~~~~~~~-----~h 302 (577)
T 2ymu_A 236 IASASDDKTVKLWNR---NGQLLQTLTGHSSSVNGVAFRP----DGQTIASASDDKTVKLWNR-NGQLLQTLT-----GH 302 (577)
T ss_dssp EEEEETTSCEEEECT---TSCEEEEECCCSSCEEEEEECT----TSSEEEEEETTSCEEEEET-TSCEEEEEC-----CC
T ss_pred EEEEeCCCEEEEEeC---CCCEEEEEecCCCCEEEEEEcC----CCCEEEEEeCCCEEEEEeC-CCcEEEEEe-----cC
Confidence 455666666665543 2345667889999999999999 789999999988 999995 556666665 67
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeeccc--
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLSL-- 158 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~~-- 158 (394)
...|.+++|+ |+++ ++++++.|+.|++||.. ++.+..+.+|...|.+++|+| ++..+++++. .+++|+...
T Consensus 303 ~~~v~~~~~~--~~~~-~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~~~~ 377 (577)
T 2ymu_A 303 SSSVWGVAFS--PDGQ-TIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQL 377 (577)
T ss_dssp SSCEEEEEEC--TTSS-EEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTCCE
T ss_pred CCCeEEEEEC--CCCC-EEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcCCCCE
Confidence 8899999887 9999 99999999999999975 556678889999999999999 7788888876 788887622
Q ss_pred -----------eeeeeeec-cceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEE
Q 016185 159 -----------ICLLLFIR-SNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 226 (394)
Q Consensus 159 -----------~~~~~~~~-~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~i 226 (394)
.++.+.++ ..+++++.|+.|++||. +++.+..+. +|...|++++|+| ++.+|++++.|+.|++
T Consensus 378 ~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~---~~~~~v~~~~~s~-d~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 378 LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVWGVAFSP-DDQTIASASDDKTVKL 452 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred EEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEec---CCCCCeEEEEECC-CCCEEEEEcCCCEEEE
Confidence 23334444 45778889999999995 677778887 8999999999999 9999999999999999
Q ss_pred EEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcc
Q 016185 227 WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTA 304 (394)
Q Consensus 227 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 304 (394)
||... ..+..+..|...|.+++|+ +++|++++.|+.|++||.. ++
T Consensus 453 w~~~~------------------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~-------- 499 (577)
T 2ymu_A 453 WNRNG------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ-------- 499 (577)
T ss_dssp EETTS------------------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC--------
T ss_pred EECCC------------------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC--------
Confidence 99654 2356778899999999998 7899999999999999964 33
Q ss_pred eecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCC
Q 016185 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 384 (394)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 384 (394)
.+..+.+|...|++++|+|++ .+|++++.||.|++||.. + ..+..+. +|.+.|++++|+||+++|++++.|+
T Consensus 500 -~~~~~~~h~~~v~~l~~s~dg--~~l~s~~~dg~v~lwd~~-~--~~~~~~~--~h~~~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 500 -LLQTLTGHSSSVRGVAFSPDG--QTIASASDDKTVKLWNRN-G--QLLQTLT--GHSSSVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp -EEEEEECCSSCEEEEEECTTS--SCEEEEETTSEEEEECTT-S--CEEEEEE--CCSSCEEEEEECTTSSCEEEEETTS
T ss_pred -EEEEEeCCCCCEEEEEEcCCC--CEEEEEECcCEEEEEeCC-C--CEEEEEc--CCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 577888999999999999999 689999999999999964 3 3567777 8999999999999999999999999
Q ss_pred eEEEEE
Q 016185 385 AIWRWD 390 (394)
Q Consensus 385 ~i~iwd 390 (394)
.|++||
T Consensus 572 ~i~~Wd 577 (577)
T 2ymu_A 572 TVKLWN 577 (577)
T ss_dssp CEEEEC
T ss_pred EEEEeC
Confidence 999997
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.2e-44 Score=332.68 Aligned_cols=308 Identities=23% Similarity=0.381 Sum_probs=263.0
Q ss_pred ceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEE
Q 016185 24 RVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLV 102 (394)
Q Consensus 24 ~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 102 (394)
+..+.|+||+++|++|+|+| +|++||+++.|+ |+||| .+++.+..+. +|...|.+++|+ |+|+ +|+
T Consensus 7 ~e~~~L~GH~~~V~~~a~sp----dg~~las~~~d~~v~iWd-~~~~~~~~l~-----gh~~~V~~l~fs--pdg~-~la 73 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSP----DGQTIASASDDKTVKLWN-RNGQLLQTLT-----GHSSSVWGVAFS--PDGQ-TIA 73 (577)
T ss_dssp CEEEEECCCSSCEEEEEECT----TSSCEEEEETTSEEEEEC-TTSCEEEEEE-----CCSSCEEEEEEC--TTSS-EEE
T ss_pred EEeeEECCCCCcEEEEEECC----CCCEEEEEeCCCEEEEEE-CCCCEEEEEe-----CCCCCEEEEEEC--CCCC-EEE
Confidence 44567999999999999999 899999999998 99999 5778888877 688999999988 9999 999
Q ss_pred EeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeecc-----------------------
Q 016185 103 AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLS----------------------- 157 (394)
Q Consensus 103 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~----------------------- 157 (394)
+++.|+.|+|||+ +++++..+.+|...|.+++|+| ++.+|++++. .+++|+..
T Consensus 74 s~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 151 (577)
T 2ymu_A 74 SASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG 151 (577)
T ss_dssp EEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTS
T ss_pred EEeCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECC-CCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCC
Confidence 9999999999995 6788999999999999999999 7788888875 55555430
Q ss_pred -------------------------------ceeeeeee-ccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEE
Q 016185 158 -------------------------------LICLLLFI-RSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSV 205 (394)
Q Consensus 158 -------------------------------~~~~~~~~-~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~ 205 (394)
+..+.+.+ ...+++++.|+.|++||. +++.+..+. +|...|.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~---~~~~~v~~~ 227 (577)
T 2ymu_A 152 QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVRGV 227 (577)
T ss_dssp SCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE---CCSSCEEEE
T ss_pred ccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe---cCCCCEEEE
Confidence 01122222 235778899999999995 577777777 799999999
Q ss_pred EecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec
Q 016185 206 DFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV 283 (394)
Q Consensus 206 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~ 283 (394)
+|+| ++.+|++++.|+.|++||... ..+..+.+|...|.+++|+ ++.+++++.
T Consensus 228 ~~s~-dg~~l~~~~~d~~i~~w~~~~------------------------~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~ 282 (577)
T 2ymu_A 228 AFSP-DGQTIASASDDKTVKLWNRNG------------------------QLLQTLTGHSSSVNGVAFRPDGQTIASASD 282 (577)
T ss_dssp EECT-TSSCEEEEETTSCEEEECTTS------------------------CEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECC-CCCEEEEEeCCCEEEEEeCCC------------------------CEEEEEecCCCCEEEEEEcCCCCEEEEEeC
Confidence 9999 999999999999999999654 2356778899999999997 779999999
Q ss_pred CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccC
Q 016185 284 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKS 363 (394)
Q Consensus 284 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 363 (394)
|+.|++||.... .+..+.+|...|.+++|+|++ .++++++.|+.|++||+... .+..+. +|..
T Consensus 283 d~~i~~w~~~~~----------~~~~~~~h~~~v~~~~~~~~~--~~l~t~~~d~~i~~w~~~~~---~~~~~~--~~~~ 345 (577)
T 2ymu_A 283 DKTVKLWNRNGQ----------LLQTLTGHSSSVWGVAFSPDG--QTIASASDDKTVKLWNRNGQ---HLQTLT--GHSS 345 (577)
T ss_dssp TSCEEEEETTSC----------EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTSC---EEEEEC--CCSS
T ss_pred CCEEEEEeCCCc----------EEEEEecCCCCeEEEEECCCC--CEEEEEeCCCeEEEEeCCCC---eeEEEe--CCCC
Confidence 999999996543 566778899999999999999 68999999999999998654 455566 8889
Q ss_pred CeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 364 PIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 364 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
.|.+++|+|++++|++++.||.|++||..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~ 374 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRN 374 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCC
Confidence 99999999999999999999999999964
No 21
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-44 Score=322.25 Aligned_cols=314 Identities=18% Similarity=0.201 Sum_probs=265.9
Q ss_pred ccCccceeEEEEEeeCCCcce-EEEEecCCc-EEEEEc----CCCc------eeEEeeecccCC-----cccceEEEEEE
Q 016185 30 QEGKRPLYAVVFNFIDSRYFN-VFATVGGNR-VTVYQC----LEGG------VIAALQSYVDED-----KEESFYTVSWA 92 (394)
Q Consensus 30 ~~h~~~v~~i~~sp~~~~~~~-~las~~~d~-i~vw~~----~~~~------~~~~~~~~~~~~-----~~~~v~~~~~~ 92 (394)
..|.++|++++|+| +++ +||+++.|+ |++|++ .+++ ....+....... |...|.+++|+
T Consensus 42 ~~~~~~v~~~~~s~----~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 42 IVKLDNIVSSTWNP----LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp EEECSCCSEEEECS----SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC
T ss_pred eeccCceEEEEECC----CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc
Confidence 34669999999999 688 999999988 999999 8877 444444322222 67799999998
Q ss_pred EcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeecc-------------
Q 016185 93 CNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLS------------- 157 (394)
Q Consensus 93 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~------------- 157 (394)
|+++ +|++++.||.|++|| .+++.+..+..|...|.+++|+| ++.+|++++. .+++|+..
T Consensus 118 --~~~~-~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 118 --HDGN-SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp --TTSS-EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred --CCCC-EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence 8998 999999999999999 67888899999999999999999 7778887775 78888862
Q ss_pred ----------------ceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC
Q 016185 158 ----------------LICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 221 (394)
Q Consensus 158 ----------------~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d 221 (394)
..++.+.+++.+++++.++.|++||+++++.+..+. .|...|.+++|+| ++.+|++++.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~---~~~~~i~~~~~~~-~~~~l~~~~~d 268 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLI---GHHGPISVLEFND-TNKLLLSASDD 268 (425)
T ss_dssp -------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEEC---CCSSCEEEEEEET-TTTEEEEEETT
T ss_pred CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeec---cCCCceEEEEECC-CCCEEEEEcCC
Confidence 555666677889999999999999999998888887 7999999999999 88999999999
Q ss_pred CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeC-cEEEEeecCCeEEEecCCCCCCCCC
Q 016185 222 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG-DFILSKSVDNEIVLWEPKMKEQSPG 300 (394)
Q Consensus 222 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~ 300 (394)
|.|++||+++ ...+..+..|...|.++.|++ .++++++.|+.|++||+++++
T Consensus 269 ~~i~i~d~~~-----------------------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---- 321 (425)
T 1r5m_A 269 GTLRIWHGGN-----------------------GNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNT---- 321 (425)
T ss_dssp SCEEEECSSS-----------------------BSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTE----
T ss_pred CEEEEEECCC-----------------------CccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCc----
Confidence 9999999998 345667778999999999983 399999999999999998765
Q ss_pred CCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc------------------eeeEEeccCCcc
Q 016185 301 EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP------------------VLIARLSHAQSK 362 (394)
Q Consensus 301 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------------------~~~~~~~~~~~~ 362 (394)
.+..+..|...+.+++|+|++ .+|++++.||.|++||+.+.+. ..+..+. .|.
T Consensus 322 -----~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 392 (425)
T 1r5m_A 322 -----LLALSIVDGVPIFAGRISQDG--QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQ--SSQ 392 (425)
T ss_dssp -----EEEEEECTTCCEEEEEECTTS--SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEEC--CTT
T ss_pred -----EeEecccCCccEEEEEEcCCC--CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhc--Ccc
Confidence 567777888899999999999 6999999999999999987630 1456666 775
Q ss_pred C--CeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 363 S--PIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 363 ~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
. .|++++|+|++++|++++.||.|++||++
T Consensus 393 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 393 DNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 5 99999999999999999999999999986
No 22
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.9e-43 Score=299.20 Aligned_cols=246 Identities=16% Similarity=0.246 Sum_probs=219.1
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
.|.+.|.+++|+ |+++ +|++|+.||.|++||+.+++.+..+..|..+|.+++|+| ++++|++|+.
T Consensus 11 ~h~~~V~~~~fs--p~~~-~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~----------- 75 (304)
T 2ynn_A 11 NRSDRVKGIDFH--PTEP-WVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSD----------- 75 (304)
T ss_dssp EECSCEEEEEEC--SSSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEET-----------
T ss_pred CCCCceEEEEEC--CCCC-EEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECC-----------
Confidence 688899999988 9999 999999999999999999999999999999999999999 7899999999
Q ss_pred eeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecccc
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 240 (394)
|+.|++||+++++.+..+. +|...|.+++|+| ++.+|++|+.|++|++||+++..
T Consensus 76 --------------d~~i~vwd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~------- 130 (304)
T 2ynn_A 76 --------------DFRIRVFNYNTGEKVVDFE---AHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNW------- 130 (304)
T ss_dssp --------------TSEEEEEETTTCCEEEEEE---CCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTT-------
T ss_pred --------------CCEEEEEECCCCcEEEEEe---CCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCc-------
Confidence 9999999999999999998 8999999999999 99999999999999999998732
Q ss_pred ccCCCCCCCCccccccceeeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCe
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 317 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i 317 (394)
.....+.+|...|.+++|+ +.++++++.|+.|++||++.... .......+...+
T Consensus 131 ---------------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--------~~~~~~~~~~~v 187 (304)
T 2ynn_A 131 ---------------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--------NFTLTTGQERGV 187 (304)
T ss_dssp ---------------EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--------SEEEECCCTTCE
T ss_pred ---------------chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--------cceeccCCcCcE
Confidence 2345678899999999997 46999999999999999987652 122233456789
Q ss_pred EEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 318 WFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
..+.|+|.....+|++|+.|+.|++||+.++ ..+..+. +|...|..++|+|++++|++|+.||.|++||+++
T Consensus 188 ~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~--~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTK--SCVATLE--GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EEEEECCSTTCCEEEEEETTSEEEEEETTTT--EEEEEEE--CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC--ccceeeC--CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9999998554479999999999999999987 4677777 8999999999999999999999999999999865
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-43 Score=334.94 Aligned_cols=296 Identities=22% Similarity=0.331 Sum_probs=242.9
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc-----eeEEeeecccCCcccceEEEEEEEcC
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG-----VIAALQSYVDEDKEESFYTVSWACNV 95 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~ 95 (394)
.+.....+++|.+.|++|+|+|+ ++++|++|+.|+ |++|++.+.. ....+. +|...|.+++|+ |
T Consensus 371 ~l~~~~~l~~H~~~V~~v~~~~~---~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~-----~h~~~v~~v~~s--~ 440 (694)
T 3dm0_A 371 GLVLKGTMRAHTDMVTAIATPID---NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-----GHSHFVEDVVLS--S 440 (694)
T ss_dssp SSEEEEEEECCSSCEEEEECCTT---CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE-----CCSSCEEEEEEC--T
T ss_pred ccchhhhcccCCceeEEEEecCC---CCCEEEEEeCCCcEEEEEccCCCcccccccceec-----CCCCcEEEEEEC--C
Confidence 35566778999999999999982 467999999998 9999987643 223344 688999999988 9
Q ss_pred CCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 96 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
+++ +|++|+.||.|++||+.+++....+.+|...|.+++|+| ++.+|++++. |
T Consensus 441 ~g~-~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~-------------------------D 493 (694)
T 3dm0_A 441 DGQ-FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASR-------------------------D 493 (694)
T ss_dssp TSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEET-------------------------T
T ss_pred CCC-EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeC-------------------------C
Confidence 999 999999999999999999999999999999999999999 7889999999 9
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCC--eeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI--YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
++|++||..............+|...|.+++|+| ++ ..|++++.|+.|++||+++
T Consensus 494 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~d~~v~vwd~~~---------------------- 550 (694)
T 3dm0_A 494 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSP-NTLQPTIVSASWDKTVKVWNLSN---------------------- 550 (694)
T ss_dssp SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECS-CSSSCEEEEEETTSCEEEEETTT----------------------
T ss_pred CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeC-CCCcceEEEEeCCCeEEEEECCC----------------------
Confidence 9999999865544444333346889999999999 64 5799999999999999988
Q ss_pred cccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceE
Q 016185 254 VQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 331 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 331 (394)
......+.+|...|.+++|+ ++++++++.||.|++||+++++ .+..+.. ...+.+++|+|++ .++
T Consensus 551 -~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~---------~~~~~~~-~~~v~~~~~sp~~--~~l 617 (694)
T 3dm0_A 551 -CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK---------KLYSLEA-NSVIHALCFSPNR--YWL 617 (694)
T ss_dssp -CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE---------EEECCBC-SSCEEEEEECSSS--SEE
T ss_pred -CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---------eEEEecC-CCcEEEEEEcCCC--cEE
Confidence 33466788999999999998 7899999999999999999875 3444433 4579999999998 455
Q ss_pred EEEeCCCcEEEEEecCCCceeeEEecc-----------------CCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 332 AIGNREGKIFVWELQSSPPVLIARLSH-----------------AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 332 ~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+++ .++.|++||+.+++ .+..+.. ..+...+++++|+|+|++|++|+.||.|+||++..
T Consensus 618 ~~~-~~~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 618 CAA-TEHGIKIWDLESKS--IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEE-ETTEEEEEETTTTE--EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEE-cCCCEEEEECCCCC--ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 555 46779999998874 3333321 01122478999999999999999999999999863
No 24
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=302.52 Aligned_cols=267 Identities=15% Similarity=0.255 Sum_probs=241.9
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
..++|..+..+.+.........+...+.+|...|.+++|+| ++.++++++.|+ |++||+.+++.+..+. .
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~----~~~~l~s~s~D~~i~lWd~~~~~~~~~~~-----~ 120 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH----TLPIAASSSLDAHIRLWDLENGKQIKSID-----A 120 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS----SSSEEEEEETTSEEEEEETTTTEEEEEEE-----C
T ss_pred EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC----CCCEEEEEeCCCcEEEEECCCCCEEEEEe-----C
Confidence 36778888888887766666666778899999999999998 788999999998 9999999999888877 4
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
+...+.+++|+ |+++ +|++|+.||.|++|++.+++....+..|...|.+++|+| ++++|++++.
T Consensus 121 ~~~~~~~~~~s--pdg~-~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~lasg~~------------ 184 (321)
T 3ow8_A 121 GPVDAWTLAFS--PDSQ-YLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAI------------ 184 (321)
T ss_dssp CTTCCCCEEEC--TTSS-EEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT-TSSEEEEEET------------
T ss_pred CCccEEEEEEC--CCCC-EEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC-CCCEEEEEcC------------
Confidence 66677788887 9999 999999999999999999999999999999999999999 8899999999
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccc
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 241 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 241 (394)
|+.|++||+++++.+..+. +|..+|.+++|+| ++.+|++++.|+.|++||+++
T Consensus 185 -------------dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~---------- 237 (321)
T 3ow8_A 185 -------------DGIINIFDIATGKLLHTLE---GHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQH---------- 237 (321)
T ss_dssp -------------TSCEEEEETTTTEEEEEEC---CCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTT----------
T ss_pred -------------CCeEEEEECCCCcEEEEEc---ccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCC----------
Confidence 9999999999999999888 8999999999999 999999999999999999988
Q ss_pred cCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEE
Q 016185 242 WTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF 319 (394)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 319 (394)
......+.+|...|.+++|+ +++|++++.|+.|++||+++++ .+..+..|...|.+
T Consensus 238 -------------~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~---------~~~~~~~h~~~v~~ 295 (321)
T 3ow8_A 238 -------------ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT---------CVHTFFDHQDQVWG 295 (321)
T ss_dssp -------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EEEEECCCSSCEEE
T ss_pred -------------cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE---------EEEEEcCCCCcEEE
Confidence 33466788999999999998 7799999999999999999776 67788889999999
Q ss_pred EEEeecCCcceEEEEeCCCcEEEEEe
Q 016185 320 IKFSCDFHYNAAAIGNREGKIFVWEL 345 (394)
Q Consensus 320 ~~~~~~~~~~~l~~~~~dg~i~iwd~ 345 (394)
++|+|++ .+|++++.|+.|++||+
T Consensus 296 v~~s~~g--~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 296 VKYNGNG--SKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEECTTS--SEEEEEETTCCEEEEEC
T ss_pred EEECCCC--CEEEEEeCCCeEEEEeC
Confidence 9999999 68999999999999996
No 25
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-42 Score=301.47 Aligned_cols=291 Identities=15% Similarity=0.194 Sum_probs=252.6
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcE
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPF 100 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 100 (394)
.......+.+|.++|++++|+| ++++|++++.|+ |++||+.+++.+..+. .|...|.+++|+ |+++ +
T Consensus 21 ~~~~~~~l~~h~~~v~~~~~s~----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~--~~~~-~ 88 (369)
T 3zwl_B 21 SHMKAIKLTGHERPLTQVKYNK----EGDLLFSCSKDSSASVWYSLNGERLGTLD-----GHTGTIWSIDVD--CFTK-Y 88 (369)
T ss_dssp CSEEEEEEECCSSCEEEEEECT----TSCEEEEEESSSCEEEEETTTCCEEEEEC-----CCSSCEEEEEEC--TTSS-E
T ss_pred cccccEEEEEeeceEEEEEEcC----CCCEEEEEeCCCEEEEEeCCCchhhhhhh-----hcCCcEEEEEEc--CCCC-E
Confidence 3445566899999999999999 789999999988 9999999999888887 688899999988 8998 9
Q ss_pred EEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC-----
Q 016185 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD----- 175 (394)
Q Consensus 101 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d----- 175 (394)
|++++.||.|++||+.+++.+..+. +...|.+++|+| ++.++++++. +
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~-------------------------~~~~~~ 141 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILD-------------------------NVMKNP 141 (369)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEEC-------------------------CBTTBC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecC-------------------------CccCCC
Confidence 9999999999999999999998888 888999999999 7788888887 7
Q ss_pred CcEEEEEecCCc-----------EEEEeeccCCCcc--cEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecccccc
Q 016185 176 ESVRLWNVQTGI-----------CILIFAGAGGHRN--EVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 176 ~~i~vwd~~~~~-----------~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
+.|++||++.+. ....+. .|.. .+.+++|+| ++++|++++.||.|++||+++.
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~---------- 207 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKII---THEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNN---------- 207 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEE---CCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTT----------
T ss_pred CEEEEEEecCCccceeecccccceeeecc---CCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCC----------
Confidence 999999998664 222333 4555 999999999 9999999999999999999872
Q ss_pred CCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEE
Q 016185 243 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 320 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 320 (394)
..++..+..|...|.+++|+ +++|++++.|+.|++||+++.+ .+..+. +...+..+
T Consensus 208 ------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~---------~~~~~~-~~~~~~~~ 265 (369)
T 3zwl_B 208 ------------YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ---------VLKKYE-TDCPLNTA 265 (369)
T ss_dssp ------------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---------EEEEEE-CSSCEEEE
T ss_pred ------------cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc---------eeeeec-CCCCceeE
Confidence 12466778899999999997 7899999999999999999875 344444 66789999
Q ss_pred EEeecCCcceEEEEeCCC--------------cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeE
Q 016185 321 KFSCDFHYNAAAIGNREG--------------KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 386 (394)
Q Consensus 321 ~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 386 (394)
+|+|++ .++++++.++ .+++||+.+++ .+..+. +|...|++++|+|++++|++++.||.|
T Consensus 266 ~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~v 339 (369)
T 3zwl_B 266 VITPLK--EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQ--GHFGPLNTVAISPQGTSYASGGEDGFI 339 (369)
T ss_dssp EECSSS--SEEEEEECCC-------------CEEEEEETTTCC--EEEEEE--CCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EecCCC--ceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhhee--cccCcEEEEEECCCCCEEEEEcCCCeE
Confidence 999999 6899998888 89999998884 566666 888999999999999999999999999
Q ss_pred EEEEcCC
Q 016185 387 WRWDAIP 393 (394)
Q Consensus 387 ~iwd~~~ 393 (394)
++|++++
T Consensus 340 ~iw~~~~ 346 (369)
T 3zwl_B 340 RLHHFEK 346 (369)
T ss_dssp EEEEECH
T ss_pred EEEECcc
Confidence 9999863
No 26
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.2e-42 Score=298.16 Aligned_cols=285 Identities=14% Similarity=0.228 Sum_probs=245.5
Q ss_pred eccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC
Q 016185 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN 107 (394)
Q Consensus 29 ~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d 107 (394)
..+|...|++++|+| ++++|++++ ++ |++||+.+++....+.......|...|.+++|+ |+++ +|++++.|
T Consensus 47 ~~~h~~~v~~~~~~~----~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~-~l~~~~~d 118 (337)
T 1gxr_A 47 TLNHGEVVCAVTISN----PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL--PDGC-TLIVGGEA 118 (337)
T ss_dssp EECCSSCCCEEEECS----SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEEC--TTSS-EEEEEESS
T ss_pred eccCCCceEEEEEec----CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEc--CCCC-EEEEEcCC
Confidence 347999999999999 789999999 65 999999887654444433333578899999988 8998 99999999
Q ss_pred CeEEEEECCCCe--eEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC
Q 016185 108 GIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT 185 (394)
Q Consensus 108 g~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~ 185 (394)
|.|++||+.+++ ....+..|...|.+++|+| ++.++++++. |+.|++||+++
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~-------------------------dg~v~~~d~~~ 172 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCS-------------------------DGNIAVWDLHN 172 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEET-------------------------TSCEEEEETTT
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeC-------------------------CCcEEEEeCCC
Confidence 999999999876 6677888999999999999 7889999998 99999999999
Q ss_pred CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCC
Q 016185 186 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 265 (394)
Q Consensus 186 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (394)
++....+. .|...|.+++|+| ++.+|++++.||.|++||+++.+ .+... .+.
T Consensus 173 ~~~~~~~~---~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~-----------------------~~~~~-~~~ 224 (337)
T 1gxr_A 173 QTLVRQFQ---GHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGR-----------------------QLQQH-DFT 224 (337)
T ss_dssp TEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTE-----------------------EEEEE-ECS
T ss_pred Cceeeeee---cccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCc-----------------------eEeee-cCC
Confidence 99988887 7999999999999 99999999999999999999843 23333 467
Q ss_pred CceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEE
Q 016185 266 NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVW 343 (394)
Q Consensus 266 ~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iw 343 (394)
..+.+++|+ ++++++++.|+.|++||+++.+ ...+..|...+.+++|+|++ .+|++++.||.|++|
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----------KYQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLNAW 292 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----------EEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----------eEEEcCCccceeEEEECCCC--CEEEEecCCCcEEEE
Confidence 789999997 7899999999999999998764 23566788899999999999 689999999999999
Q ss_pred EecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 344 ELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 344 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
|+.+++. .... .|...|.+++|+|++++|++++.||.|++|++.
T Consensus 293 ~~~~~~~--~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 293 RTPYGAS--IFQS---KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ETTTCCE--EEEE---ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ECCCCeE--EEEe---cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9998853 3322 456899999999999999999999999999974
No 27
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-42 Score=304.85 Aligned_cols=305 Identities=14% Similarity=0.158 Sum_probs=241.7
Q ss_pred cccceeeeeccCccceeEEEEEeeCCCcc-eEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcC-CC
Q 016185 21 REYRVTNKLQEGKRPLYAVVFNFIDSRYF-NVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNV-DG 97 (394)
Q Consensus 21 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~~-~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 97 (394)
..+++...+.+|.+.|++++|+| ++ ++|++++.|+ |+|||+.+++....+.. ..|...|.+++|+ | ++
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~~--~~~~ 131 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHP----THPTTVAVGSKGGDIILWDYDVQNKTSFIQG---MGPGDAITGMKFN--QFNT 131 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECS----SCTTEEEEEEBTSCEEEEETTSTTCEEEECC---CSTTCBEEEEEEE--TTEE
T ss_pred cccceEEeccCCCCCEEEEEECC----CCCCEEEEEcCCCeEEEEeCCCcccceeeec---CCcCCceeEEEeC--CCCC
Confidence 45667788899999999999999 66 8999999998 99999998887666542 2588999999998 8 55
Q ss_pred CcEEEEeecCCeEEEEECCCCeeEEEEEec---CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeecc
Q 016185 98 IPFLVAGGINGIIRVIDVSNEKLHKSFVGH---GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 98 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
. +|++++.|+.|++||+.. +....+..+ ...|.+++|+| ++.+|++++.
T Consensus 132 ~-~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~------------------------- 183 (383)
T 3ei3_B 132 N-QLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDS------------------------- 183 (383)
T ss_dssp E-EEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEET-------------------------
T ss_pred C-EEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC-CCCEEEEECC-------------------------
Confidence 6 999999999999999985 556666544 47899999999 7889999999
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
|+.|++||+ +++.+..+. +|...|.+++|+| ++. +|++++.|+.|++||+++.+..
T Consensus 184 d~~i~i~d~-~~~~~~~~~---~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~------------------ 240 (383)
T 3ei3_B 184 TGRLLLLGL-DGHEIFKEK---LHKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRNIKDK------------------ 240 (383)
T ss_dssp TSEEEEEET-TSCEEEEEE---CSSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGGCCST------------------
T ss_pred CCCEEEEEC-CCCEEEEec---cCCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcc------------------
Confidence 999999999 577888887 7999999999999 777 8999999999999999983210
Q ss_pred cccceeeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCc--------ceecccccCCCCCeEEEEE
Q 016185 254 VQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGT--------ADILQKYPVPECDIWFIKF 322 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~ 322 (394)
...+..+ .|...|.+++|+ ++++++++.|+.|++||+++.+....... ...+...-.+...+..++|
T Consensus 241 -~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 241 -NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp -TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred -cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 1123333 699999999997 47999999999999999998764211000 0000000012245666788
Q ss_pred eecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCCC
Q 016185 323 SCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIPT 394 (394)
Q Consensus 323 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 394 (394)
+|+++ + +++.|+.|++||+.+++ .+..+....|...+..++|+|++++|++|+ ||.|++||++++
T Consensus 319 s~dg~--~--s~s~d~~i~iwd~~~~~--~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~~ 383 (383)
T 3ei3_B 319 YPDDQ--L--LLNDKRTIDIYDANSGG--LVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNREDT 383 (383)
T ss_dssp BCCTT--T--CTTCCCCEEEEETTTCC--EEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC--
T ss_pred cCCcc--c--ccCCCCeEEEEecCCCc--eeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCCC
Confidence 88883 4 88899999999999885 566666334678888889999999999997 999999999864
No 28
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-42 Score=292.67 Aligned_cols=286 Identities=16% Similarity=0.236 Sum_probs=248.4
Q ss_pred ccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCC
Q 016185 20 KREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGI 98 (394)
Q Consensus 20 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 98 (394)
..++++.+.+.+|.+.|++++| | ++++|++++.|+ |++||+.+++....+. .|...|.+++|+ |+++
T Consensus 5 ~~~~~~~~~l~~h~~~v~~~~~-~----~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-----~~~~~v~~~~~~--~~~~ 72 (313)
T 3odt_A 5 FTGYQLSATLKGHDQDVRDVVA-V----DDSKVASVSRDGTVRLWSKDDQWLGTVVY-----TGQGFLNSVCYD--SEKE 72 (313)
T ss_dssp CCCCEEEEEECCCSSCEEEEEE-E----ETTEEEEEETTSEEEEEEESSSEEEEEEE-----ECSSCEEEEEEE--TTTT
T ss_pred cccHHHHHHhhCCCCCcEEEEe-c----CCCEEEEEEcCCcEEEEECCCCEEEEEee-----cCCccEEEEEEC--CCCC
Confidence 4567788899999999999999 7 688999999998 9999998888777777 578899999998 8998
Q ss_pred cEEEEeecCCeEEEEECCCC---eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 99 PFLVAGGINGIIRVIDVSNE---KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 99 ~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
+|++++.||.|++|++... +....+.+|...|.+++|. +.++++++. |
T Consensus 73 -~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~-------------------------d 123 (313)
T 3odt_A 73 -LLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSW-------------------------D 123 (313)
T ss_dssp -EEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEET-------------------------T
T ss_pred -EEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeC-------------------------C
Confidence 9999999999999998754 6678888999999999994 468999998 9
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccc
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 255 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (394)
+.|++|| .++....+. .|...+.+++|.|.++.++++++.||.|++||...
T Consensus 124 ~~i~~~d--~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~------------------------ 174 (313)
T 3odt_A 124 KTAKVWK--EGSLVYNLQ---AHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK------------------------ 174 (313)
T ss_dssp SEEEEEE--TTEEEEEEE---CCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE------------------------
T ss_pred CCEEEEc--CCcEEEecc---cCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc------------------------
Confidence 9999999 677777777 79999999999876788999999999999999544
Q ss_pred cceeeeec-CCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEE
Q 016185 256 FPVFIASV-HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 333 (394)
Q Consensus 256 ~~~~~~~~-~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 333 (394)
....+.. |...+.+++|+ ...+++++.||.|++||+++++ .+..+..|...|.+++|+|++ .+++
T Consensus 175 -~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~---~l~~ 241 (313)
T 3odt_A 175 -VIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGD---------VLRTYEGHESFVYCIKLLPNG---DIVS 241 (313)
T ss_dssp -EEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCC---------EEEEEECCSSCEEEEEECTTS---CEEE
T ss_pred -eEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchh---------hhhhhhcCCceEEEEEEecCC---CEEE
Confidence 3445555 88999999998 4459999999999999999776 677788899999999999998 4889
Q ss_pred EeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 334 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 334 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
++.||.|++||+.+++ ....+. .|...|.+++|+|+++ +++++.||.|++||+++
T Consensus 242 ~~~dg~v~iwd~~~~~--~~~~~~--~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 242 CGEDRTVRIWSKENGS--LKQVIT--LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EETTSEEEEECTTTCC--EEEEEE--CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred EecCCEEEEEECCCCc--eeEEEe--ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 9999999999999884 566666 7778999999999998 66789999999999874
No 29
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.6e-43 Score=304.29 Aligned_cols=301 Identities=11% Similarity=0.187 Sum_probs=241.8
Q ss_pred ceeeeeccCccceeEEEEEeeCCCcc-eEEEEecC---Cc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCC--
Q 016185 24 RVTNKLQEGKRPLYAVVFNFIDSRYF-NVFATVGG---NR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-- 96 (394)
Q Consensus 24 ~~~~~~~~h~~~v~~i~~sp~~~~~~-~~las~~~---d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 96 (394)
...+.+++|.+.|++++|+| ++ .++++++. |+ |++||+.+++....... .|...|.+++|+ |+
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p----~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~----~~~~~v~~~~~~--~~~~ 78 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVP----CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI----EKAKPIKCGTFG--ATSL 78 (357)
T ss_dssp EEEEEEEECSSCEEEEEECT----TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE----EESSCEEEEECT--TCCT
T ss_pred HhhhhccCCCCceEEEEEcC----CCceEEEecCccCCCcEEEEEeCCCCcccceeee----cccCcEEEEEEc--CCCC
Confidence 34455688999999999999 55 56667765 66 99999998876544332 478899999988 77
Q ss_pred -CCcEEEEeecCCeEEEEECCCCe-eEEEEEecCCceeEEEE------cCCCCcEEEEceeeeEEeeccceeeeeeeccc
Q 016185 97 -GIPFLVAGGINGIIRVIDVSNEK-LHKSFVGHGDSINEIRT------QPLKPSLVVSASKVIIISSLSLICLLLFIRSN 168 (394)
Q Consensus 97 -~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~ 168 (394)
+. +|++|+.||.|++||+.+++ .+..+.+|...|.+++| +| ++.+|++++.
T Consensus 79 ~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~------------------- 137 (357)
T 3i2n_A 79 QQR-YLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSR------------------- 137 (357)
T ss_dssp TTC-CEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEET-------------------
T ss_pred CCc-eEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeC-------------------
Confidence 57 99999999999999999887 88899999999999965 56 7789999999
Q ss_pred eeeeccCCcEEEEEecCCc-EEEEeeccCCC-cccEEEEE----ecCCCCeeEEeeccCCcEEEEEccccceeecccccc
Q 016185 169 CLRVGQDESVRLWNVQTGI-CILIFAGAGGH-RNEVLSVD----FHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 169 ~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~-~~~i~~~~----~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
|+.|++||+++++ ....+....++ ...+.+++ |+| ++.+|++++.||.|++||+++.+
T Consensus 138 ------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~--------- 201 (357)
T 3i2n_A 138 ------DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMA--------- 201 (357)
T ss_dssp ------TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTE---------
T ss_pred ------CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCc---------
Confidence 9999999999887 66666621122 33899998 778 89999999999999999999843
Q ss_pred CCCCCCCCccccccceeeeecCCCceEEEEEe-----CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCe
Q 016185 243 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 317 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i 317 (394)
......|...|.++.|+ ++++++++.||.|++||+++.+.... .....+..|...|
T Consensus 202 ---------------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~~~~~v 262 (357)
T 3i2n_A 202 ---------------LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG----FASVSEKAHKSTV 262 (357)
T ss_dssp ---------------EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE----EEEEEEECCSSCE
T ss_pred ---------------eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc----eeeeccCCCcCCE
Confidence 23346688899999996 47999999999999999987652110 0011334788999
Q ss_pred EEEEEeecCCcceEEEEeCCCcEEEEEecCCCce-----------------eeEEeccCCccCCeeEEEeccCCCEEE-E
Q 016185 318 WFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV-----------------LIARLSHAQSKSPIRQTAMSYDGSTIL-S 379 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----------------~~~~~~~~~~~~~v~~~~~s~~~~~l~-s 379 (394)
++++|+|+++ .++++++.||.|++||+..+... .+..+. +|...|++++|+|++++|+ +
T Consensus 263 ~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~s 339 (357)
T 3i2n_A 263 WQVRHLPQNR-ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT--LSTQPISSLDWSPDKRGLCVC 339 (357)
T ss_dssp EEEEEETTEE-EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE--CCSSCEEEEEECSSSTTEEEE
T ss_pred EEEEECCCCC-cEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc--cCCCCeeEEEEcCCCCeEEEE
Confidence 9999999983 38999999999999999865422 455555 8889999999999999998 8
Q ss_pred eccCCeEEEEEcCC
Q 016185 380 CCEDGAIWRWDAIP 393 (394)
Q Consensus 380 ~~~dg~i~iwd~~~ 393 (394)
++.||.|++||+.+
T Consensus 340 ~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 340 SSFDQTVRVLIVTK 353 (357)
T ss_dssp EETTSEEEEEEECC
T ss_pred ecCCCcEEEEECCC
Confidence 99999999999975
No 30
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.2e-42 Score=303.42 Aligned_cols=306 Identities=16% Similarity=0.164 Sum_probs=246.2
Q ss_pred eccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc--eeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG--VIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 29 ~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
+..|.++|++++|+| ++++|++++.++ |++||+.+++ .+..+. .|...|.+++|+ |+++ +|++++
T Consensus 4 ~~~~~~~i~~~~~s~----~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-----~h~~~v~~~~~~--~~~~-~l~~~~ 71 (372)
T 1k8k_C 4 HSFLVEPISCHAWNK----DRTQIAICPNNHEVHIYEKSGNKWVQVHELK-----EHNGQVTGVDWA--PDSN-RIVTCG 71 (372)
T ss_dssp EESCSSCCCEEEECT----TSSEEEEECSSSEEEEEEEETTEEEEEEEEE-----CCSSCEEEEEEE--TTTT-EEEEEE
T ss_pred ecccCCCeEEEEECC----CCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-----CCCCcccEEEEe--CCCC-EEEEEc
Confidence 456899999999999 789999998888 9999998887 666666 688899999998 8998 999999
Q ss_pred cCCeEEEEECCCCeeEEEE--EecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEe
Q 016185 106 INGIIRVIDVSNEKLHKSF--VGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183 (394)
Q Consensus 106 ~dg~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~ 183 (394)
.||.|++||+.+++....+ ..|...|.+++|+| ++.+|++++. |+.|++||+
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-------------------------d~~v~i~d~ 125 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSG-------------------------SRVISICYF 125 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEET-------------------------TSSEEEEEE
T ss_pred CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC-CCCEEEEEeC-------------------------CCEEEEEEe
Confidence 9999999999888765554 56889999999999 7789999999 999999999
Q ss_pred cCCcE---EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccc-cccCCCCCCCCcccccccee
Q 016185 184 QTGIC---ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS-FTWTDLPSKFPTKYVQFPVF 259 (394)
Q Consensus 184 ~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 259 (394)
+.++. ...+. .+|...|.+++|+| ++.+|++++.||.|++||++......... ..+. ........+.
T Consensus 126 ~~~~~~~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~ 196 (372)
T 1k8k_C 126 EQENDWWVCKHIK--KPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG------SKMPFGELMF 196 (372)
T ss_dssp ETTTTEEEEEEEC--TTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTB------SCCCTTCEEE
T ss_pred cCCCcceeeeeee--cccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccc------cccchhhheE
Confidence 98773 23332 26899999999999 99999999999999999986522110000 0000 0011234566
Q ss_pred eeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCC
Q 016185 260 IASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE 337 (394)
Q Consensus 260 ~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d 337 (394)
.+..|...|.++.|+ ++++++++.|+.|++||+++++ .+..+..|..++.+++|+|++ .+++++ .|
T Consensus 197 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~--~~l~~~-~d 264 (372)
T 1k8k_C 197 ESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM---------AVATLASETLPLLAVTFITES--SLVAAG-HD 264 (372)
T ss_dssp ECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT---------EEEEEECSSCCEEEEEEEETT--EEEEEE-TT
T ss_pred ecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc---------eeEEEccCCCCeEEEEEecCC--CEEEEE-eC
Confidence 777899999999997 7799999999999999999776 677778888899999999999 577777 89
Q ss_pred CcEEEEEecC--CCceeeEE----------------------------------ec-cCCccCCeeEEEec-cCC---CE
Q 016185 338 GKIFVWELQS--SPPVLIAR----------------------------------LS-HAQSKSPIRQTAMS-YDG---ST 376 (394)
Q Consensus 338 g~i~iwd~~~--~~~~~~~~----------------------------------~~-~~~~~~~v~~~~~s-~~~---~~ 376 (394)
+.|++|++.. ++...... .. ..+|..+|++++|+ ++| ++
T Consensus 265 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~ 344 (372)
T 1k8k_C 265 CFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQ 344 (372)
T ss_dssp SSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSE
T ss_pred CeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceee
Confidence 9999999988 31111000 11 23899999999977 566 99
Q ss_pred EEEeccCCeEEEEEcCC
Q 016185 377 ILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 377 l~s~~~dg~i~iwd~~~ 393 (394)
|++|+.||.|++||+.+
T Consensus 345 l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 345 FCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEEETTSEEEEEEHHH
T ss_pred EEEecCCCceEEEEecC
Confidence 99999999999999853
No 31
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.3e-43 Score=309.31 Aligned_cols=293 Identities=13% Similarity=0.155 Sum_probs=247.4
Q ss_pred cceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc------eeEEeeecccCCcccceEEEEEEEcC
Q 016185 23 YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG------VIAALQSYVDEDKEESFYTVSWACNV 95 (394)
Q Consensus 23 ~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~ 95 (394)
....+.+++|.++|++++|+| ++|++++.|+ |++|++.+++ .+..+. .|...|.+++|+ |
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~------~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~--~ 72 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN------SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-----VHKSGLHHVDVL--Q 72 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS------SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-----CCTTCEEEEEEE--E
T ss_pred hhhhhhhhhhhcCeEEEEecC------CeEEEEcCCCEEEEEECCCcccccCCCcceEEe-----cCCCcEEEEEEe--c
Confidence 345667889999999999986 5899999988 9999999887 566666 688899999998 7
Q ss_pred C----C---CcEEEEeecCCeEEEEECCCCee-----EEEEEec-----CCceeEEEEc----CCCCcE-EEEceeeeEE
Q 016185 96 D----G---IPFLVAGGINGIIRVIDVSNEKL-----HKSFVGH-----GDSINEIRTQ----PLKPSL-VVSASKVIII 153 (394)
Q Consensus 96 ~----~---~~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~-l~s~~~~i~~ 153 (394)
+ + + +|++++.||.|++||+.+++. ...+..| ...|.+++|+ | ++.+ |++++.
T Consensus 73 ~~~~~g~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~---- 146 (397)
T 1sq9_A 73 AIERDAFELC-LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDV---- 146 (397)
T ss_dssp EEETTTEEEE-EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEET----
T ss_pred ccccCCcccc-EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeC----
Confidence 7 7 7 999999999999999988876 8888888 5899999999 8 6777 999998
Q ss_pred eeccceeeeeeeccceeeeccCCcEEEEEecC------CcEEE-----Eeec----cCCCcccEEEEEecCCCCeeEEee
Q 016185 154 SSLSLICLLLFIRSNCLRVGQDESVRLWNVQT------GICIL-----IFAG----AGGHRNEVLSVDFHPSDIYRIASC 218 (394)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~------~~~~~-----~~~~----~~~~~~~i~~~~~~~~~~~~l~s~ 218 (394)
||.|++||+++ ++.+. .+.. ...|...|.+++|+| ++ +|+++
T Consensus 147 ---------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~ 203 (397)
T 1sq9_A 147 ---------------------KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-RG-LIATG 203 (397)
T ss_dssp ---------------------TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEE
T ss_pred ---------------------CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEE
Confidence 99999999998 65554 5530 014889999999999 88 99999
Q ss_pred ccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeec---C---CCceEEEEEe--CcEEEEeecC---CeE
Q 016185 219 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV---H---SNYVDCNRWL--GDFILSKSVD---NEI 287 (394)
Q Consensus 219 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~i~~~~~~--~~~l~~~~~d---g~i 287 (394)
+.||.|++||+++ ..++..+.. | ...|.+++|+ ++++++++.| +.|
T Consensus 204 ~~dg~i~i~d~~~-----------------------~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i 260 (397)
T 1sq9_A 204 FNNGTVQISELST-----------------------LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCI 260 (397)
T ss_dssp CTTSEEEEEETTT-----------------------TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEE
T ss_pred eCCCcEEEEECCC-----------------------CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceE
Confidence 9999999999998 345666777 8 9999999997 7899999999 999
Q ss_pred EEecCCCCCCCCCCCcceecccccC-------------CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeE
Q 016185 288 VLWEPKMKEQSPGEGTADILQKYPV-------------PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIA 354 (394)
Q Consensus 288 ~~~d~~~~~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 354 (394)
++||+++++ .+..+.. |...|.+++|+|++ .+|++++.||.|++||+.+++ .+.
T Consensus 261 ~i~d~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~--~~~ 327 (397)
T 1sq9_A 261 TLYETEFGE---------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG--ETLCSAGWDGKLRFWDVKTKE--RIT 327 (397)
T ss_dssp EEEETTTCC---------EEEEECBC--------CCBSBSSCEEEEEECSSS--SEEEEEETTSEEEEEETTTTE--EEE
T ss_pred EEEECCCCc---------ccceeccCcccccccccccccCCcEEEEEECCCC--CEEEEEeCCCeEEEEEcCCCc--eeE
Confidence 999999775 4566666 88999999999999 689999999999999998874 444
Q ss_pred Eecc----CCc---------------cCCeeEEEeccCC----------CEEEEeccCCeEEEEEcCC
Q 016185 355 RLSH----AQS---------------KSPIRQTAMSYDG----------STILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 355 ~~~~----~~~---------------~~~v~~~~~s~~~----------~~l~s~~~dg~i~iwd~~~ 393 (394)
.+.. .+| ...|++++|+|++ ++|++++.||.|++||+++
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 328 TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 4441 134 8999999999998 7999999999999999875
No 32
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-42 Score=308.65 Aligned_cols=265 Identities=20% Similarity=0.318 Sum_probs=237.0
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCc
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDK 82 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~ 82 (394)
.++|+.++.+.+..... .++.+.+++|.+.|++++|+| ++++|++|+.|+ |++||+.+++.+..+. .|
T Consensus 123 l~s~s~Dg~i~vwd~~~--~~~~~~l~~h~~~V~~v~~~~----~~~~l~sgs~D~~i~iwd~~~~~~~~~~~-----~h 191 (410)
T 1vyh_C 123 MVSASEDATIKVWDYET--GDFERTLKGHTDSVQDISFDH----SGKLLASCSADMTIKLWDFQGFECIRTMH-----GH 191 (410)
T ss_dssp EEEEESSSCEEEEETTT--CCCCEEECCCSSCEEEEEECT----TSSEEEEEETTSCCCEEETTSSCEEECCC-----CC
T ss_pred EEEEeCCCeEEEEECCC--CcEEEEEeccCCcEEEEEEcC----CCCEEEEEeCCCeEEEEeCCCCceeEEEc-----CC
Confidence 56677777777665443 345678899999999999999 789999999999 9999999988877776 68
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeee
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLL 162 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~ 162 (394)
...|.+++|+ |+++ +|++|+.|+.|++||+.+++++..+.+|...|.++.|+| ++.++++++.
T Consensus 192 ~~~V~~v~~~--p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~------------- 254 (410)
T 1vyh_C 192 DHNVSSVSIM--PNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSN------------- 254 (410)
T ss_dssp SSCEEEEEEC--SSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEET-------------
T ss_pred CCCEEEEEEe--CCCC-EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcC-------------
Confidence 8899999988 8998 999999999999999999999999999999999999999 8899999999
Q ss_pred eeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCC--------------------CeeEEeeccCC
Q 016185 163 LFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSD--------------------IYRIASCGMDN 222 (394)
Q Consensus 163 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------~~~l~s~~~dg 222 (394)
|+.|++||+++++....+. +|...|.+++|+| + +.+|++|+.|+
T Consensus 255 ------------D~~v~vwd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 255 ------------DQTVRVWVVATKECKAELR---EHRHVVECISWAP-ESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp ------------TSCEEEEETTTCCEEEEEC---CCSSCEEEEEECC-SCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred ------------CCeEEEEECCCCceeeEec---CCCceEEEEEEcC-cccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 9999999999999998887 8999999999998 5 56899999999
Q ss_pred cEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCC
Q 016185 223 TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPG 300 (394)
Q Consensus 223 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~ 300 (394)
.|++||+++ ..++..+.+|...|.++.|+ +++|++++.|+.|++||+.+++
T Consensus 319 ~i~iwd~~~-----------------------~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~---- 371 (410)
T 1vyh_C 319 TIKMWDVST-----------------------GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR---- 371 (410)
T ss_dssp EEEEEETTT-----------------------TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC----
T ss_pred eEEEEECCC-----------------------CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc----
Confidence 999999998 44577888999999999998 7899999999999999998776
Q ss_pred CCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEec
Q 016185 301 EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 346 (394)
Q Consensus 301 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 346 (394)
.+..+..|...|++++|+|++ .+|++|+.||.|++|+++
T Consensus 372 -----~~~~~~~h~~~v~~l~~~~~~--~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 372 -----CMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp -----CCEEEECCSSCEEEEEECSSS--SCEEEEETTSEEEEEC--
T ss_pred -----eEEEEcCCCCcEEEEEEcCCC--CEEEEEeCCCcEEEEeCC
Confidence 567788899999999999999 689999999999999863
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=298.52 Aligned_cols=249 Identities=16% Similarity=0.160 Sum_probs=212.7
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCe
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGI 109 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~ 109 (394)
.|...|++++|+| ++ .|++|+.|+ |+|||+.+++.+..+... ..+|.+.|.+++|+ |+|+ +|++|+.||.
T Consensus 80 ~~~~~v~~~~~s~----d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~-~~~H~~~V~~v~~s--pdg~-~l~sgs~d~~ 150 (344)
T 4gqb_B 80 QTEAGVADLTWVG----ER-GILVASDSGAVELWELDENETLIVSKFC-KYEHDDIVSTVSVL--SSGT-QAVSGSKDIC 150 (344)
T ss_dssp EESSCEEEEEEET----TT-EEEEEETTSEEEEEEECTTSSCEEEEEE-EECCSSCEEEEEEC--TTSS-EEEEEETTSC
T ss_pred ccCCCEEEEEEeC----CC-eEEEEECCCEEEEEeccCCCceeEeecc-ccCCCCCEEEEEEC--CCCC-EEEEEeCCCe
Confidence 4667899999998 44 567778887 999999998866554422 22689999999988 9999 9999999999
Q ss_pred EEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEE
Q 016185 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICI 189 (394)
Q Consensus 110 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 189 (394)
|++||+.+++++..+.+|...|.+++|+|++..+|++++. |+.|++||+++++..
T Consensus 151 i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~-------------------------D~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSE-------------------------DNRILLWDTRCPKPA 205 (344)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEET-------------------------TSCEEEEETTSSSCE
T ss_pred EEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecc-------------------------cccccccccccccee
Confidence 9999999999999999999999999999966678999999 999999999999988
Q ss_pred EEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceE
Q 016185 190 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 269 (394)
Q Consensus 190 ~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 269 (394)
..+... .+...+.+++|+|.++.+|++|+.||.|++||+++ ..++..+.+|...|.
T Consensus 206 ~~~~~~-~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-----------------------~~~~~~~~~h~~~v~ 261 (344)
T 4gqb_B 206 SQIGCS-APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS-----------------------TSCVLSSAVHSQCVT 261 (344)
T ss_dssp EECC-----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-------------------------CCEEEECCSSCEE
T ss_pred eeeecc-eeeccceeeeecCCCCcceEEeccCCcEEEEECCC-----------------------CcEEEEEcCCCCCEE
Confidence 877521 35667999999996677899999999999999998 446778899999999
Q ss_pred EEEEe--C-cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEec
Q 016185 270 CNRWL--G-DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 346 (394)
Q Consensus 270 ~~~~~--~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 346 (394)
+++|+ + ++|++++.|++|++||+++++ +..+.+|...|++++|+|+++ .+|++++.|++|++|++.
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~~~~----------~~~~~~H~~~V~~v~~sp~~~-~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSSLSE----------LFRSQAHRDFVRDATWSPLNH-SLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTCCE----------EEEECCCSSCEEEEEECSSST-TEEEEEETTSCEEEEECC
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECCCCc----------EEEEcCCCCCEEEEEEeCCCC-eEEEEEcCCCeEEEEECC
Confidence 99997 4 579999999999999998764 345678999999999999986 478899999999999998
Q ss_pred CC
Q 016185 347 SS 348 (394)
Q Consensus 347 ~~ 348 (394)
+.
T Consensus 331 ~~ 332 (344)
T 4gqb_B 331 TE 332 (344)
T ss_dssp C-
T ss_pred CC
Confidence 75
No 34
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.1e-41 Score=302.47 Aligned_cols=310 Identities=15% Similarity=0.311 Sum_probs=262.1
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcE
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPF 100 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 100 (394)
.++....+.+|.+.|.. ++++ ++++|++|+.|+ |++||+.+++.+..+. .|...|.++++. +. +
T Consensus 107 ~~~~~~~l~~h~~~v~~-~~~~----~g~~l~sg~~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~----~~-~ 171 (445)
T 2ovr_B 107 ELKSPKVLKGHDDHVIT-CLQF----CGNRIVSGSDDNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMR----DN-I 171 (445)
T ss_dssp CCCCCEEEECSTTSCEE-EEEE----ETTEEEEEETTSCEEEEETTTCCEEEECC-----CCSSCEEEEEEE----TT-E
T ss_pred CcceeEEecccCCCcEE-EEEE----cCCEEEEEECCCcEEEEECCCCcEEEEEc-----CCCCCEEEEEec----CC-E
Confidence 34456678899987543 2455 478999999998 9999999999888877 688899999886 45 8
Q ss_pred EEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeecc-------------ceeeeeee
Q 016185 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLS-------------LICLLLFI 165 (394)
Q Consensus 101 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~-------------~~~~~~~~ 165 (394)
+++|+.||.|++||+.+++.+..+.+|...|.+++|++ ..+++++. .+++|+.. .+..+.++
T Consensus 172 l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~ 248 (445)
T 2ovr_B 172 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 248 (445)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC
T ss_pred EEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC
Confidence 99999999999999999999999999999999999975 56777775 88999862 13344446
Q ss_pred ccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCC
Q 016185 166 RSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 245 (394)
Q Consensus 166 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 245 (394)
+..+++++.||.|++||+++++.+..+. +|...|.++.| ++..+++++.||.|++||+++
T Consensus 249 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~-------------- 308 (445)
T 2ovr_B 249 GRRVVSGAYDFMVKVWDPETETCLHTLQ---GHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVET-------------- 308 (445)
T ss_dssp SSCEEEEETTSCEEEEEGGGTEEEEEEC---CCSSCEEEEEE---CSSEEEEEETTSCEEEEETTT--------------
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEec---CCCCceEEEEE---CCCEEEEEeCCCeEEEEECCC--------------
Confidence 7789999999999999999999999888 79999999999 457899999999999999998
Q ss_pred CCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC---CCCCeEEEEE
Q 016185 246 PSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV---PECDIWFIKF 322 (394)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~ 322 (394)
...+..+..|...+.++.++++++++++.||.|++||+++++ .+..+.. |...|.+++|
T Consensus 309 ---------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~---------~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 309 ---------GNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ---------CLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp ---------CCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCC---------EEEEECSTTSCSSCEEEEEE
T ss_pred ---------CCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCc---------EEEEEccCCCCCCCEEEEEE
Confidence 345677888999999999999999999999999999998776 3444443 7788999999
Q ss_pred eecCCcceEEEEeCCCcEEEEEecCCCceeeEEe---ccCCccCCeeEEEeccCCCEEEEeccCCe----EEEEEcCC
Q 016185 323 SCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL---SHAQSKSPIRQTAMSYDGSTILSCCEDGA----IWRWDAIP 393 (394)
Q Consensus 323 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~s~~~dg~----i~iwd~~~ 393 (394)
+ + .++++|+.||.|++||+.+++ .+..+ ...+|.+.|.+++|+|++.+|++|+.||. |.|||+..
T Consensus 371 ~--~--~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 371 N--K--NFVITSSDDGTVKLWDLKTGE--FIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp C--S--SEEEEEETTSEEEEEETTTCC--EEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred C--C--CEEEEEeCCCeEEEEECCCCc--eeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 5 3 589999999999999999885 44444 22377889999999999999999999997 99999875
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-43 Score=314.67 Aligned_cols=316 Identities=16% Similarity=0.229 Sum_probs=254.2
Q ss_pred CCCceeeeeccccccc-ceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCC----CceeEEeeecccCC
Q 016185 8 CEPLVGSLTPSKKREY-RVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLE----GGVIAALQSYVDED 81 (394)
Q Consensus 8 ~~~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~----~~~~~~~~~~~~~~ 81 (394)
..+....+........ ++... ..|...|++++|+| ++++|++++.|+ |++||+.+ .+.+..+. .
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~----~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-----~ 111 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSH----NNKIIAGALDNGSLELYSTNEANNAINSMARFS-----N 111 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECS----SSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-----C
T ss_pred CCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECC----CCCeEEEEccCCeEEEeecccccccccchhhcc-----C
Confidence 5555666665443322 23333 35889999999999 789999999988 99999987 23555555 6
Q ss_pred cccceEEEEEEEcCC-CCcEEEEeecCCeEEEEECCCCe------eEEE---EEecCCceeEEEEcCCCCcEEEEceeee
Q 016185 82 KEESFYTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEK------LHKS---FVGHGDSINEIRTQPLKPSLVVSASKVI 151 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~------~~~~---~~~~~~~v~~~~~~~~~~~~l~s~~~~i 151 (394)
|...|.+++|+ |+ +. +|++++.||.|++||+.+++ .... +..|...|.+++|+|+++.+|++++.
T Consensus 112 h~~~v~~~~~~--~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-- 186 (416)
T 2pm9_A 112 HSSSVKTVKFN--AKQDN-VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-- 186 (416)
T ss_dssp SSSCCCEEEEC--SSSTT-BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS--
T ss_pred CccceEEEEEc--CCCCC-EEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC--
Confidence 88899999998 87 66 99999999999999998876 3333 35789999999999955889999999
Q ss_pred EEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccC---CCcccEEEEEecCCCC-eeEEeeccCC---cE
Q 016185 152 IISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG---GHRNEVLSVDFHPSDI-YRIASCGMDN---TV 224 (394)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~-~~l~s~~~dg---~v 224 (394)
|+.|++||+++++.+..+.... +|...|.+++|+| ++ .++++++.|+ .|
T Consensus 187 -----------------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 187 -----------------------SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP-KNSTRVATATGSDNDPSI 242 (416)
T ss_dssp -----------------------SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS-SCTTEEEEEECCSSSCCC
T ss_pred -----------------------CCCEEEEECCCCCcceEEeccccccccCCceEEEEECC-CCCCEEEEEECCCCCceE
Confidence 9999999999999888887210 1178999999999 64 7899999998 99
Q ss_pred EEEEccccceeeccccccCCCCCCCCccccccceeeee-cCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCC
Q 016185 225 KIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPG 300 (394)
Q Consensus 225 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~ 300 (394)
++||+++.. .++..+. .|...|.+++|+ ++++++++.|+.|++||+++++
T Consensus 243 ~~~d~~~~~----------------------~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~---- 296 (416)
T 2pm9_A 243 LIWDLRNAN----------------------TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE---- 296 (416)
T ss_dssp CEEETTSTT----------------------SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC----
T ss_pred EEEeCCCCC----------------------CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc----
Confidence 999999832 2345566 799999999996 6799999999999999999876
Q ss_pred CCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEE-------------ecc---------
Q 016185 301 EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIAR-------------LSH--------- 358 (394)
Q Consensus 301 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------~~~--------- 358 (394)
.+..+..|...|.+++|+|++. .+|++++.|+.|++||+.+........ +.+
T Consensus 297 -----~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (416)
T 2pm9_A 297 -----QLSQFPARGNWCFKTKFAPEAP-DLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEK 370 (416)
T ss_dssp -----EEEEEECSSSCCCCEEECTTCT-TEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSC
T ss_pred -----cceeecCCCCceEEEEECCCCC-CEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccc
Confidence 6777888999999999999984 489999999999999998764321110 001
Q ss_pred ---------CCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCCC
Q 016185 359 ---------AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIPT 394 (394)
Q Consensus 359 ---------~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 394 (394)
..|..++.+++|+|+|++|++++.||.|+||++.+.
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 371 PSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 116678889999999999999999999999999863
No 36
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-40 Score=311.63 Aligned_cols=337 Identities=13% Similarity=0.165 Sum_probs=260.0
Q ss_pred ceeeeeccCccceeEEEEEeeCCCcce-EEEEecCCc-EEEEEcCCCceeEEeeecccCCccc---ceEEEEEEEcCC-C
Q 016185 24 RVTNKLQEGKRPLYAVVFNFIDSRYFN-VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEE---SFYTVSWACNVD-G 97 (394)
Q Consensus 24 ~~~~~~~~h~~~v~~i~~sp~~~~~~~-~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~-~ 97 (394)
+....+.+|...|++++|+| +++ ++++++.|+ |++||+.+++.+..+. .|.. .|.+++|+ |+ +
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~----~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~--~~~~ 219 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQ----SRPMRSMTVGDDGSVVFYQGPPFKFSASDR-----THHKQGSFVRDVEFS--PDSG 219 (615)
T ss_dssp CEEEECCSCSSCEEEEEECS----SSSCEEEEEETTTEEEEEETTTBEEEEEEC-----SSSCTTCCEEEEEEC--STTC
T ss_pred CcceeeecCCccEEEEEECC----CCCcEEEEEeCCCcEEEEeCCCcceeeeec-----ccCCCCceEEEEEEC--CCCC
Confidence 45667889999999999999 565 899999988 9999999998888877 5666 89999988 99 8
Q ss_pred CcEEEEeecCCeEEEEECCCCeeEEEE-E---ecCCceeEEEEcCCCCcEEEEcee--eeEEeeccc-------------
Q 016185 98 IPFLVAGGINGIIRVIDVSNEKLHKSF-V---GHGDSINEIRTQPLKPSLVVSASK--VIIISSLSL------------- 158 (394)
Q Consensus 98 ~~~l~s~~~dg~i~vwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~~------------- 158 (394)
+ +|++++.||.|++||+.+++.+..+ . .|...|.+++|+ ++.+|++++. .+++|+...
T Consensus 220 ~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 296 (615)
T 1pgu_A 220 E-FVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ 296 (615)
T ss_dssp C-EEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC
T ss_pred C-EEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCc
Confidence 8 9999999999999999999999998 6 899999999999 5677887775 789998621
Q ss_pred -----eeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCC-----------------------
Q 016185 159 -----ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS----------------------- 210 (394)
Q Consensus 159 -----~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------------------- 210 (394)
..+.+..+..+++++.|+.|++||+.+++.+..+. +|...|.+++| |+
T Consensus 297 ~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~---~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~ 372 (615)
T 1pgu_A 297 LGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTIS---GHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHS 372 (615)
T ss_dssp GGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEEC---CCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCC
T ss_pred ccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEe---CCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCccc
Confidence 22333356788899999999999999888887776 56666666666 51
Q ss_pred ---------CCeeEEeeccCCcEEEEEccccceee-------------------ccccccC-------------CC----
Q 016185 211 ---------DIYRIASCGMDNTVKIWSMKEFWTYV-------------------EKSFTWT-------------DL---- 245 (394)
Q Consensus 211 ---------~~~~l~s~~~dg~v~iwd~~~~~~~~-------------------~~~~~~~-------------~~---- 245 (394)
++..|++++.|+.+++||+.+.+... .....|. ..
T Consensus 373 ~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (615)
T 1pgu_A 373 NLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAV 452 (615)
T ss_dssp SCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEE
T ss_pred CceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEE
Confidence 24556666666666666665422100 0000000 00
Q ss_pred ---CCCC------Cc--c---ccccce--eeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceec
Q 016185 246 ---PSKF------PT--K---YVQFPV--FIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADIL 307 (394)
Q Consensus 246 ---~~~~------~~--~---~~~~~~--~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 307 (394)
.... .. . ...... ..+..|...|.+++|+ +++|++++.||.|++||+.+++ .+
T Consensus 453 ~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~---------~~ 523 (615)
T 1pgu_A 453 SLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE---------VK 523 (615)
T ss_dssp EECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---------EE
T ss_pred EEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc---------ce
Confidence 0000 00 0 000011 4556789999999997 8899999999999999999876 56
Q ss_pred ccccC-CCCCeEEEEEee----------cCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCE
Q 016185 308 QKYPV-PECDIWFIKFSC----------DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGST 376 (394)
Q Consensus 308 ~~~~~-~~~~i~~~~~~~----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 376 (394)
..+.. |...|++++|+| ++ .+|++++.||.|++||+.++. ..+..+. +|...|++++|+|+++
T Consensus 524 ~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~--~~l~~~~~dg~i~iw~~~~~~-~~~~~~~--~h~~~v~~l~~s~~~~- 597 (615)
T 1pgu_A 524 TSRWAFRTSKINAISWKPAEKGANEEEIEE--DLVATGSLDTNIFIYSVKRPM-KIIKALN--AHKDGVNNLLWETPST- 597 (615)
T ss_dssp ECCSCCCSSCEEEEEECCCC------CCSC--CEEEEEETTSCEEEEESSCTT-CCEEETT--SSTTCEEEEEEEETTE-
T ss_pred eEeecCCCCceeEEEEcCccccccccccCC--CEEEEEcCCCcEEEEECCCCc-eechhhh--cCccceEEEEEcCCCC-
Confidence 66666 899999999999 88 699999999999999998863 3566666 8999999999999999
Q ss_pred EEEeccCCeEEEEEcCC
Q 016185 377 ILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 377 l~s~~~dg~i~iwd~~~ 393 (394)
|++++.||.|++|++.+
T Consensus 598 l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 598 LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEEETTSCEEEEEEC-
T ss_pred eEEecCCceEEEEeeec
Confidence 99999999999999975
No 37
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.2e-41 Score=297.04 Aligned_cols=282 Identities=21% Similarity=0.366 Sum_probs=237.0
Q ss_pred ccCccceeE--EEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec
Q 016185 30 QEGKRPLYA--VVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI 106 (394)
Q Consensus 30 ~~h~~~v~~--i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~ 106 (394)
.+|...+++ ++|++ +. +++++.|+ |++||+.+++....+.. .|...|.+++|+ |+++ +|++|+.
T Consensus 88 ~~~~~~~~~~~~~~s~-----~~-l~~~~~d~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s--~~~~-~l~~~~~ 154 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN-----LN-VVAVALERNVYVWNADSGSVSALAET----DESTYVASVKWS--HDGS-FLSVGLG 154 (401)
T ss_dssp TTCCCCTTCBCEEECT-----TS-EEEEEETTEEEEEETTTCCEEEEEEC----CTTCCEEEEEEC--TTSS-EEEEEET
T ss_pred CCCcCCceEEEEeecC-----CC-EEEEECCCeEEEeeCCCCcEeEeeec----CCCCCEEEEEEC--CCCC-EEEEECC
Confidence 366665444 55553 34 55555565 99999999987776663 378899999998 8998 9999999
Q ss_pred CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEec-C
Q 016185 107 NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ-T 185 (394)
Q Consensus 107 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~-~ 185 (394)
||.|++||+.+++.+..+.+|...|.+++|++ .++++++. ||.|++||++ .
T Consensus 155 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~-------------------------dg~i~i~d~~~~ 206 (401)
T 4aez_A 155 NGLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSR-------------------------SGAIHHHDVRIA 206 (401)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEET-------------------------TSEEEEEETTSS
T ss_pred CCeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcC-------------------------CCCEEEEecccC
Confidence 99999999999999999999999999999954 69999999 9999999998 4
Q ss_pred CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCC
Q 016185 186 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 265 (394)
Q Consensus 186 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (394)
+.....+. +|...|.+++|+| ++.+|++++.||.|++||+++ ..++..+..|.
T Consensus 207 ~~~~~~~~---~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~-----------------------~~~~~~~~~~~ 259 (401)
T 4aez_A 207 NHQIGTLQ---GHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARS-----------------------SIPKFTKTNHN 259 (401)
T ss_dssp SCEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTC-----------------------SSEEEEECCCS
T ss_pred cceeeEEc---CCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCC-----------------------CCccEEecCCc
Confidence 56677777 7999999999999 999999999999999999998 44567778899
Q ss_pred CceEEEEEe---CcEEEEee--cCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEE--EeCCC
Q 016185 266 NYVDCNRWL---GDFILSKS--VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI--GNREG 338 (394)
Q Consensus 266 ~~i~~~~~~---~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~--~~~dg 338 (394)
..|.+++|+ ..++++++ .|+.|++||+++++ .+..+. +...+.+++|+|++ .++++ |+.||
T Consensus 260 ~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~---------~~~~~~-~~~~v~~~~~s~~~--~~l~~~~g~~dg 327 (401)
T 4aez_A 260 AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA---------RVNTVD-AGSQVTSLIWSPHS--KEIMSTHGFPDN 327 (401)
T ss_dssp SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC---------EEEEEE-CSSCEEEEEECSSS--SEEEEEECTTTC
T ss_pred ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC---------EEEEEe-CCCcEEEEEECCCC--CeEEEEeecCCC
Confidence 999999998 34667655 79999999999875 344443 45689999999999 56777 55899
Q ss_pred cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 339 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.|++||+.+++......+. +|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 328 ~i~v~~~~~~~~~~~~~~~--~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 328 NLSIWSYSSSGLTKQVDIP--AHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEEEEEEETTEEEEEEEEE--CCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred cEEEEecCCccceeEEEec--CCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 9999999987545555565 8889999999999999999999999999999875
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-42 Score=308.40 Aligned_cols=289 Identities=13% Similarity=0.221 Sum_probs=242.8
Q ss_pred CccceeEEEEEeeCCCcce-EEEEe----------cCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCc
Q 016185 32 GKRPLYAVVFNFIDSRYFN-VFATV----------GGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIP 99 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~-~las~----------~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (394)
+...|.+++|+| +++ +||++ +.|+ |+|||+.+++....+... .|...|.+++|+ |+++
T Consensus 11 ~~~~v~~~~~sp----~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~---~~~~~v~~~~~s--~~~~- 80 (416)
T 2pm9_A 11 EFSRTATFAWSH----DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL---QVDSKFNDLDWS--HNNK- 80 (416)
T ss_dssp EEEESCBCCBCS----SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC---CCSSCEEEEEEC--SSSS-
T ss_pred hhhhcceEeeCC----CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE---ecCCceEEEEEC--CCCC-
Confidence 346799999999 565 99999 7787 999999887643222222 478899999997 9998
Q ss_pred EEEEeecCCeEEEEECCC----CeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 100 FLVAGGINGIIRVIDVSN----EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
+|++|+.||.|++||+.+ .+.+..+.+|...|.+++|+|+++.+|++++. |
T Consensus 81 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-------------------------d 135 (416)
T 2pm9_A 81 IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN-------------------------N 135 (416)
T ss_dssp CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS-------------------------S
T ss_pred eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC-------------------------C
Confidence 999999999999999987 45788888999999999999955899999999 9
Q ss_pred CcEEEEEecCCc------EEEEeeccCCCcccEEEEEecCCC-CeeEEeeccCCcEEEEEccccceeeccccccCCCCCC
Q 016185 176 ESVRLWNVQTGI------CILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSK 248 (394)
Q Consensus 176 ~~i~vwd~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 248 (394)
+.|++||+++++ ....+.....|...|.+++|+| + +.+|++++.||.|++||+++.+
T Consensus 136 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~v~iwd~~~~~--------------- 199 (416)
T 2pm9_A 136 GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQ-SLAHVFASAGSSNFASIWDLKAKK--------------- 199 (416)
T ss_dssp SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECS-SCTTEEEEESSSSCEEEEETTTTE---------------
T ss_pred CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCC-CCCcEEEEEcCCCCEEEEECCCCC---------------
Confidence 999999999876 3333322236899999999999 6 7899999999999999999843
Q ss_pred CCccccccceeeeecC------CCceEEEEEe--C-cEEEEeecCC---eEEEecCCCCCCCCCCCcceeccccc-CCCC
Q 016185 249 FPTKYVQFPVFIASVH------SNYVDCNRWL--G-DFILSKSVDN---EIVLWEPKMKEQSPGEGTADILQKYP-VPEC 315 (394)
Q Consensus 249 ~~~~~~~~~~~~~~~~------~~~i~~~~~~--~-~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~ 315 (394)
.+..+..| ...|.+++|+ + .++++++.|+ .|++||+++... .+..+. .|..
T Consensus 200 --------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--------~~~~~~~~~~~ 263 (416)
T 2pm9_A 200 --------EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--------PLQTLNQGHQK 263 (416)
T ss_dssp --------EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS--------CSBCCCSCCSS
T ss_pred --------cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC--------CcEEeecCccC
Confidence 34444444 7889999998 3 5899999998 999999998642 456666 7889
Q ss_pred CeEEEEEee-cCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCC-CEEEEeccCCeEEEEEcCC
Q 016185 316 DIWFIKFSC-DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG-STILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 316 ~i~~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~ 393 (394)
.|.+++|+| ++ .+|++++.|+.|++||+.+++ .+..+. +|...|.+++|+|++ .+|++++.||.|++||+.+
T Consensus 264 ~v~~~~~s~~~~--~~l~s~~~dg~v~~wd~~~~~--~~~~~~--~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 264 GILSLDWCHQDE--HLLLSSGRDNTVLLWNPESAE--QLSQFP--ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp CEEEEEECSSCS--SCEEEEESSSEEEEECSSSCC--EEEEEE--CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred ceeEEEeCCCCC--CeEEEEeCCCCEEEeeCCCCc--cceeec--CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 999999999 67 689999999999999999874 566777 888999999999998 8999999999999999874
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-42 Score=306.29 Aligned_cols=306 Identities=14% Similarity=0.123 Sum_probs=229.1
Q ss_pred eccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCC--ceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEG--GVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 29 ~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
++.|.++|++++|+| ++++||+++.|+ |+|||+.++ +.+..+. .|...|.+++|+ |+++ +|++++
T Consensus 7 ~~~~~~~v~~~~~s~----~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~s--~~~~-~l~s~s 74 (377)
T 3dwl_C 7 LHILPKPSYEHAFNS----QRTEFVTTTATNQVELYEQDGNGWKHARTFS-----DHDKIVTCVDWA--PKSN-RIVTCS 74 (377)
T ss_dssp EEECSSCCSCCEECS----SSSEEECCCSSSCBCEEEEETTEEEECCCBC-----CCSSCEEEEEEC--TTTC-CEEEEE
T ss_pred EecCCCcEEEEEECC----CCCEEEEecCCCEEEEEEccCCceEEEEEEe-----cCCceEEEEEEe--CCCC-EEEEEe
Confidence 455778999999999 789999998888 999999887 4555555 688999999988 8998 999999
Q ss_pred cCCeEEEEECCCCe---eEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEE
Q 016185 106 INGIIRVIDVSNEK---LHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWN 182 (394)
Q Consensus 106 ~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd 182 (394)
.||.|++||+.+++ ....+.+|...|.+++|+| ++.+|++++. |+.|++||
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-------------------------d~~i~iwd 128 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSG-------------------------ARVISVCY 128 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEES-------------------------SSCEEECC
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEec-------------------------CCeEEEEE
Confidence 99999999999876 6777788999999999999 7889999999 99999999
Q ss_pred ecCCcE---EEEeeccCC-CcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCc-cccccc
Q 016185 183 VQTGIC---ILIFAGAGG-HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT-KYVQFP 257 (394)
Q Consensus 183 ~~~~~~---~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 257 (394)
+++++. ...+. . |...|.+++|+| ++.+|++++.|+.|++||++......... +..... ......
T Consensus 129 ~~~~~~~~~~~~~~---~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~ 198 (377)
T 3dwl_C 129 FEQENDWWVSKHLK---RPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPE------ASVWGSRLPFNTV 198 (377)
T ss_dssp C-----CCCCEEEC---SSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCC------SCSSCSCCCEEEE
T ss_pred ECCcccceeeeEee---cccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCcc------ccccccccchhhh
Confidence 998873 55665 5 999999999999 99999999999999999997632111000 000000 011234
Q ss_pred eeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEe
Q 016185 258 VFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 258 ~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 335 (394)
+..+ .|...|.+++|+ ++++++++.||.|++||+++++. ....+..+..|...|.+++|+|++ .+|++++
T Consensus 199 ~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~ 270 (377)
T 3dwl_C 199 CAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ-----PPRALITVKLSQLPLRSLLWANES--AIVAAGY 270 (377)
T ss_dssp EECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS-----CEEECCCEECSSSCEEEEEEEETT--EEEEEES
T ss_pred hhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC-----cceeeEeecCCCCceEEEEEcCCC--CEEEEEc
Confidence 4455 899999999997 78999999999999999998763 112267788899999999999999 6888887
Q ss_pred CCCcEEEEEecCCCceee----------------------------------EEec--------------cCCccCCeeE
Q 016185 336 REGKIFVWELQSSPPVLI----------------------------------ARLS--------------HAQSKSPIRQ 367 (394)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~----------------------------------~~~~--------------~~~~~~~v~~ 367 (394)
.++.+ +|+......... ..+. ...|...|++
T Consensus 271 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~ 349 (377)
T 3dwl_C 271 NYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIAT 349 (377)
T ss_dssp SSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEE
T ss_pred CCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEE
Confidence 66655 776652210000 0000 1238899999
Q ss_pred EEeccCC-C---EEEEeccCCeEEEEEc
Q 016185 368 TAMSYDG-S---TILSCCEDGAIWRWDA 391 (394)
Q Consensus 368 ~~~s~~~-~---~l~s~~~dg~i~iwd~ 391 (394)
+++.+.. . .|+||+.||.|+|||+
T Consensus 350 ~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 350 LRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred EeccCCCCCceEEEEeecCCCcEEEecC
Confidence 9977643 3 6999999999999986
No 40
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-40 Score=316.76 Aligned_cols=340 Identities=13% Similarity=0.155 Sum_probs=251.1
Q ss_pred ccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCC
Q 016185 30 QEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGING 108 (394)
Q Consensus 30 ~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg 108 (394)
.+|.+.|++++|+| ++++||+|+.|+ |+||+....+....+ .|...|.+++|+ | |+ +|++++.|+
T Consensus 14 ~gh~~~V~~lafsp----dg~~lAsgs~Dg~I~lw~~~~~~~~~~~------~~~~~V~~l~fs--p-g~-~L~S~s~D~ 79 (902)
T 2oaj_A 14 YGMSSKPIAAAFDF----TQNLLAIATVTGEVHIYGQQQVEVVIKL------EDRSAIKEMRFV--K-GI-YLVVINAKD 79 (902)
T ss_dssp EECSSCEEEEEEET----TTTEEEEEETTSEEEEECSTTCEEEEEC------SSCCCEEEEEEE--T-TT-EEEEEETTC
T ss_pred cCCCCCcEEEEECC----CCCEEEEEeCCCEEEEEeCCCcEEEEEc------CCCCCEEEEEEc--C-CC-EEEEEECcC
Confidence 48999999999999 799999999998 999998776654332 367789999998 7 77 999999999
Q ss_pred eEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeeccc-------------------------eee
Q 016185 109 IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLSL-------------------------ICL 161 (394)
Q Consensus 109 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~~-------------------------~~~ 161 (394)
.|++||+.+++++..+. |...|.+++|+| ++.++++|+. .+++|++.. .++
T Consensus 80 ~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp EEEEEETTTCSEEEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred eEEEEECCCCcEEEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence 99999999999988886 778999999999 7788888876 889998622 122
Q ss_pred eeee--ccceeeeccCCcEEEEEecCCcEEEEeecc---------------CCCcccEEEEEecCCCCeeEEeeccCCcE
Q 016185 162 LLFI--RSNCLRVGQDESVRLWNVQTGICILIFAGA---------------GGHRNEVLSVDFHPSDIYRIASCGMDNTV 224 (394)
Q Consensus 162 ~~~~--~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~---------------~~~~~~i~~~~~~~~~~~~l~s~~~dg~v 224 (394)
.+.+ ...+++|+.|+.| +||+++++.+..+... ..|...|.+++|+| ++.+|++++.||.|
T Consensus 158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i 235 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSL 235 (902)
T ss_dssp EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCE
T ss_pred EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeE
Confidence 3333 2578899999999 9999999988887621 12357899999999 99999999999999
Q ss_pred EEEEccccceeecc--------------------------ccccCC--CCC--C------CC------c------c----
Q 016185 225 KIWSMKEFWTYVEK--------------------------SFTWTD--LPS--K------FP------T------K---- 252 (394)
Q Consensus 225 ~iwd~~~~~~~~~~--------------------------~~~~~~--~~~--~------~~------~------~---- 252 (394)
++||+++++..... .+.|.. .+. . .. . .
T Consensus 236 ~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~ 315 (902)
T 2oaj_A 236 VFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPR 315 (902)
T ss_dssp EEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCC
T ss_pred EEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCC
Confidence 99999875432110 001100 000 0 00 0 0
Q ss_pred ------------------c---------------------c-----c-----------cceee-----------------
Q 016185 253 ------------------Y---------------------V-----Q-----------FPVFI----------------- 260 (394)
Q Consensus 253 ------------------~---------------------~-----~-----------~~~~~----------------- 260 (394)
. . . ..+..
T Consensus 316 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~ 395 (902)
T 2oaj_A 316 YSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQ 395 (902)
T ss_dssp GGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCG
T ss_pred ccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCC
Confidence 0 0 0 00000
Q ss_pred -eecCCCceEEEEE----------------------------------e--CcEEEEeecCCeEEEecCCCCCCCCCCCc
Q 016185 261 -ASVHSNYVDCNRW----------------------------------L--GDFILSKSVDNEIVLWEPKMKEQSPGEGT 303 (394)
Q Consensus 261 -~~~~~~~i~~~~~----------------------------------~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 303 (394)
+..|...|+++++ + ++++++|+.|++|++||+.++...... .
T Consensus 396 ~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~-~ 474 (902)
T 2oaj_A 396 NLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNA-S 474 (902)
T ss_dssp GGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTB-C
T ss_pred cccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCc-e
Confidence 1112233444433 3 669999999999999999887421100 0
Q ss_pred cee-cc--cccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc------------------------------
Q 016185 304 ADI-LQ--KYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP------------------------------ 350 (394)
Q Consensus 304 ~~~-~~--~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------------------------------ 350 (394)
... +. ....|...|++++|+|++ .+||+|+.||+|++||+.+++.
T Consensus 475 ~~~~l~~~~~~~h~~~V~svafspdg--~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (902)
T 2oaj_A 475 FEVNLSRTLNKAKELAVDKISFAAET--LELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVD 552 (902)
T ss_dssp EEEEHHHHTTCSSSCCEEEEEEETTT--TEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEE
T ss_pred EEeechhhcCCCCCCceeEEEecCCC--CeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccc
Confidence 000 00 012678899999999999 6999999999999999987631
Q ss_pred -------------eeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 351 -------------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 351 -------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.++..+. +|.+.|++++||||| +||+|+.|++|+|||+++
T Consensus 553 ~~~~~~~~~~~g~~~~~~l~--~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 553 VRDRAPTGVRQGFMPSTAVH--ANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp CGGGCCTTCSEEEEEEEEEC--CCSCSEEEEEECBTS-EEEEEETTSEEEEEETTT
T ss_pred ccccCCCCCCCccceeEEEE--cCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCC
Confidence 1244555 799999999999999 999999999999999864
No 41
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.1e-40 Score=285.82 Aligned_cols=243 Identities=19% Similarity=0.259 Sum_probs=217.0
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
+|.+.|++++|+ |+++ +|++|+.||.|++||+.+++.+..+..|...|.+++|+| ++.+|++++.
T Consensus 53 gH~~~v~~~~~s--~d~~-~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~----------- 117 (340)
T 1got_B 53 GHLAKIYAMHWG--TDSR-LLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGL----------- 117 (340)
T ss_dssp CCSSCEEEEEEC--TTSS-EEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEET-----------
T ss_pred CCCCceEEEEEC--CCCC-EEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeC-----------
Confidence 789999999998 9999 999999999999999999999999999999999999999 7899999999
Q ss_pred eeeeeccceeeeccCCcEEEEEecCCc----EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceee
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTGI----CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYV 236 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 236 (394)
|+.|++||+.+++ ....+. +|...|.++.|++ ++. +++++.|+.|++||+++
T Consensus 118 --------------d~~v~iw~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~-l~s~s~d~~i~~wd~~~----- 173 (340)
T 1got_B 118 --------------DNICSIYNLKTREGNVRVSRELA---GHTGYLSCCRFLD-DNQ-IVTSSGDTTCALWDIET----- 173 (340)
T ss_dssp --------------TCEEEEEETTTCSBSCEEEEEEE---CCSSCEEEEEEEE-TTE-EEEEETTSCEEEEETTT-----
T ss_pred --------------CCeEEEEECccCCCcceeEEEec---CCCccEEEEEECC-CCc-EEEEECCCcEEEEECCC-----
Confidence 9999999998653 445555 8999999999998 665 89999999999999998
Q ss_pred ccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCC
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE 314 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 314 (394)
..++..+.+|...|.+++|+ ++++++++.|+.|++||+++++ .+..+..|.
T Consensus 174 ------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~---------~~~~~~~h~ 226 (340)
T 1got_B 174 ------------------GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---------CRQTFTGHE 226 (340)
T ss_dssp ------------------TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---------EEEEECCCS
T ss_pred ------------------CcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---------eEEEEcCCc
Confidence 34567788999999999998 7799999999999999999775 567788899
Q ss_pred CCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 315 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
..|++++|+|++ .+|++|+.||.|++||++.++ .+..+.+..+...|++++|+|++++|++|+.||.|++||+.+
T Consensus 227 ~~v~~v~~~p~~--~~l~s~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 227 SDINAICFFPNG--NAFATGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp SCEEEEEECTTS--SEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEEcCCC--CEEEEEcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 999999999999 699999999999999998874 445555445667899999999999999999999999999864
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3e-40 Score=294.37 Aligned_cols=281 Identities=21% Similarity=0.348 Sum_probs=237.0
Q ss_pred ceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEE
Q 016185 35 PLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVID 114 (394)
Q Consensus 35 ~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd 114 (394)
.++.|+||+ +++||+|.++.|+|||..+++....+... .|...|++++|+ |+|+ +|++|+.||.|++||
T Consensus 107 y~~~l~wS~-----~n~lAvgld~tV~lWd~~tg~~~~~~~~~---~~~~~V~sv~fs--pdg~-~lasgs~Dg~v~iWd 175 (420)
T 4gga_A 107 YLNLVDWSS-----GNVLAVALDNSVYLWSASSGDILQLLQME---QPGEYISSVAWI--KEGN-YLAVGTSSAEVQLWD 175 (420)
T ss_dssp TCBCEEECT-----TSEEEEEETTEEEEEETTTCCEEEEEECC---STTCCEEEEEEC--TTSS-EEEEEETTSCEEEEE
T ss_pred cceeEEECC-----CCEEEEEeCCEEEEEECCCCCEEEEEEec---CCCCcEEEEEEC--CCCC-EEEEEECCCeEEEEE
Confidence 367899996 46899887666999999999887776633 577889999998 9999 999999999999999
Q ss_pred CCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc-EEEEee
Q 016185 115 VSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI-CILIFA 193 (394)
Q Consensus 115 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~ 193 (394)
+.+++.+..+.+|...+.++++++ .+|++|+. |+.+++||..... .+..+.
T Consensus 176 ~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~-------------------------d~~i~~~d~~~~~~~~~~~~ 227 (420)
T 4gga_A 176 VQQQKRLRNMTSHSARVGSLSWNS---YILSSGSR-------------------------SGHIHHHDVRVAEHHVATLS 227 (420)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEET---TEEEEEET-------------------------TSEEEEEETTSSSCEEEEEE
T ss_pred cCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeC-------------------------CCceeEeeecccceeeEEec
Confidence 999999999999999999998865 79999999 9999999988644 556666
Q ss_pred ccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEE
Q 016185 194 GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW 273 (394)
Q Consensus 194 ~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 273 (394)
+|...+..+.++| ++.++++++.|+.+++|+...++.. ...+.....|...|.+++|
T Consensus 228 ---~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~-------------------~~~~~~~~~~~~~V~~~~~ 284 (420)
T 4gga_A 228 ---GHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGG-------------------WVPLQTFTQHQGAVKAVAW 284 (420)
T ss_dssp ---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSC-------------------SCCSEEECCCSSCEEEEEE
T ss_pred ---ccccceeeeeecC-CCCeeeeeeccccceEEeecccccc-------------------ceeeeeecccCCceeeeee
Confidence 8999999999999 9999999999999999999874321 2245567789999999999
Q ss_pred e---CcEEEE--eecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEE--EeCCCcEEEEEec
Q 016185 274 L---GDFILS--KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI--GNREGKIFVWELQ 346 (394)
Q Consensus 274 ~---~~~l~~--~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~--~~~dg~i~iwd~~ 346 (394)
+ +..+++ |+.|+.|++||+.+++ .+..+.. ...+.++.|+|++. .+++ |+.|+.|++||+.
T Consensus 285 ~p~~~~~la~~~gs~D~~I~iwd~~t~~---------~~~~~~~-~~~v~~~~~~~~~~--~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 285 CPWQSNVLATGGGTSDRHIRIWNVCSGA---------CLSAVDA-HSQVCSILWSPHYK--ELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp CTTCTTEEEEEECTTTCEEEEEETTTTE---------EEEEEEC-SSCEEEEEEETTTT--EEEEEECTTTCCEEEEETT
T ss_pred CCCcccEEEEEeecCCCEEEEEeCCccc---------cceeecc-ccceeeeeecCCCC--eEEEEEecCCCEEEEEECC
Confidence 7 456655 4579999999999875 3444443 35788999999995 4554 4479999999999
Q ss_pred CCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 347 SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+++ .+..+. +|.+.|++++|+|||++|+||+.|++|+|||+.+
T Consensus 353 ~~~--~v~~l~--gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 353 TMA--KVAELK--GHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp TCC--EEEEEC--CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred CCc--EEEEEc--CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 884 677787 9999999999999999999999999999999864
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7e-42 Score=306.24 Aligned_cols=308 Identities=15% Similarity=0.159 Sum_probs=224.2
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcC-CCCc
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNV-DGIP 99 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~ 99 (394)
.+.+.....+|...|+||+|+|. ++++||+|+.|+ |+|||+.+++....+.. .+|.+.|.+++|+ | ++.
T Consensus 108 ~~~~~~~~~~~~~~V~~l~~~P~---~~~~lasGs~dg~i~lWd~~~~~~~~~~~~---~gH~~~V~~l~f~--p~~~~- 178 (435)
T 4e54_B 108 SYRILQKAAPFDRRATSLAWHPT---HPSTVAVGSKGGDIMLWNFGIKDKPTFIKG---IGAGGSITGLKFN--PLNTN- 178 (435)
T ss_dssp TTTSCCEEEECSSCEEEEEECSS---CTTCEEEEETTSCEEEECSSCCSCCEEECC---CSSSCCCCEEEEC--SSCTT-
T ss_pred ceeecccCCCCCCCEEEEEEeCC---CCCEEEEEeCCCEEEEEECCCCCceeEEEc---cCCCCCEEEEEEe--CCCCC-
Confidence 44555666789999999999993 467999999998 99999988765444432 2689999999998 7 466
Q ss_pred EEEEeecCCeEEEEECCCCeeEEEEEe--cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCc
Q 016185 100 FLVAGGINGIIRVIDVSNEKLHKSFVG--HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDES 177 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~ 177 (394)
+|++|+.||+|++||++.+........ +...+.+++|+| ++.+|++|+. ||.
T Consensus 179 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~-------------------------dg~ 232 (435)
T 4e54_B 179 QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDN-------------------------VGN 232 (435)
T ss_dssp EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECS-------------------------SSB
T ss_pred EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeC-------------------------CCc
Confidence 999999999999999976544333332 234678999999 7899999999 999
Q ss_pred EEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccc
Q 016185 178 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 257 (394)
Q Consensus 178 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (394)
|++||++. +.+..+. +|...|++++|+|....+|++++.|+.|++||+++.+. ...
T Consensus 233 i~~wd~~~-~~~~~~~---~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~--------------------~~~ 288 (435)
T 4e54_B 233 VILLNMDG-KELWNLR---MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG--------------------KAS 288 (435)
T ss_dssp EEEEESSS-CBCCCSB---CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS--------------------SSC
T ss_pred EeeeccCc-ceeEEEe---cccceEEeeeecCCCceEEEEecCcceeeEEecccccc--------------------cce
Confidence 99999864 4555555 89999999999994445788999999999999988432 112
Q ss_pred eeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCC-----c---ceecccccCCCCCeEEEEEeecCC
Q 016185 258 VFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEG-----T---ADILQKYPVPECDIWFIKFSCDFH 327 (394)
Q Consensus 258 ~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~-----~---~~~~~~~~~~~~~i~~~~~~~~~~ 327 (394)
+.....|...|.+++|+ +++|++++.||.|++||+.+++...... . ...+.....+...+..+.+++++.
T Consensus 289 ~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 368 (435)
T 4e54_B 289 FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN 368 (435)
T ss_dssp CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTT
T ss_pred EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCC
Confidence 33446799999999997 7899999999999999998875311000 0 000000001112233333444442
Q ss_pred cceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEE-EeccCCCEEEEeccCCeEEEEEcCC
Q 016185 328 YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQT-AMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 328 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
..++++..++.|++||..+++ .+..+. .+|...|.++ +|+|+|++|++|+ |+.|+|||+++
T Consensus 369 -~~~~~~~~~~~i~iwd~~~g~--~~~~l~-~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 369 -FKSCTPYELRTIDVFDGNSGK--MMCQLY-DPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp -SCCSSTTCCCCEEEECSSSCC--EEEEEC-CSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred -eEEEEecCCCEEEEEECCCCc--EEEEEe-CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 122223345689999999885 344433 2677888887 6999999999886 88999999875
No 44
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.1e-39 Score=294.75 Aligned_cols=307 Identities=18% Similarity=0.305 Sum_probs=254.2
Q ss_pred eeeeeccCccce-eEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEE
Q 016185 25 VTNKLQEGKRPL-YAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLV 102 (394)
Q Consensus 25 ~~~~~~~h~~~v-~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 102 (394)
....+.+|...| .++.|+ +++|++|+.|+ |++||+.+++.+..+. .|...|.+++|+ +++ +++
T Consensus 113 ~~~~l~~h~~~v~~~~~~~------~~~l~sgs~dg~i~vwd~~~~~~~~~~~-----~h~~~V~~l~~~--~~~--~l~ 177 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFE------DNYVITGADDKMIRVYDSINKKFLLQLS-----GHDGGVWALKYA--HGG--ILV 177 (464)
T ss_dssp EEEEEECCSSSCEEEEEEE------TTEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEEC--STT--EEE
T ss_pred ceEEEcCCCCCcEEEEEEC------CCEEEEEcCCCcEEEEECCCCcEEEEEe-----CCCcCEEEEEEc--CCC--EEE
Confidence 456788998885 666654 56999999998 9999999999888887 688999999997 766 799
Q ss_pred EeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcC-CCCcEEEEcee--eeEEeeccc---------------------
Q 016185 103 AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQP-LKPSLVVSASK--VIIISSLSL--------------------- 158 (394)
Q Consensus 103 s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~--~i~~~~~~~--------------------- 158 (394)
+|+.||.|++||+.+++.+..+.+|...|.+++|++ .++.++++++. .+++|+...
T Consensus 178 s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 178 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred EEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccC
Confidence 999999999999999999999999999999999985 25678888876 888888632
Q ss_pred ---------------eeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCc
Q 016185 159 ---------------ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 223 (394)
Q Consensus 159 ---------------~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~ 223 (394)
+..+...+..+++++.|+.|++||+++++.+..+. +|...|.+++|+| ++.++++|+.||.
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~sg~~dg~ 333 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS---GHTDRIYSTIYDH-ERKRCISASMDTT 333 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEEET-TTTEEEEEETTSC
T ss_pred CCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec---CCCCCEEEEEEcC-CCCEEEEEeCCCc
Confidence 11223345678899999999999999999999888 8999999999999 9999999999999
Q ss_pred EEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCc
Q 016185 224 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGT 303 (394)
Q Consensus 224 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 303 (394)
|++||+++ ..++..+..|...|.++.++++++++++.||.|++||+++.+.
T Consensus 334 i~vwd~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~------ 384 (464)
T 3v7d_B 334 IRIWDLEN-----------------------GELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSR------ 384 (464)
T ss_dssp EEEEETTT-----------------------TEEEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE------
T ss_pred EEEEECCC-----------------------CcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCce------
Confidence 99999998 4457788899999999999999999999999999999987642
Q ss_pred ceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEE-eccCCccCCeeEEEeccCCCEEEEecc
Q 016185 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIAR-LSHAQSKSPIRQTAMSYDGSTILSCCE 382 (394)
Q Consensus 304 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~s~~~ 382 (394)
.... .+...+..++|++++ .++++++ ||.|++||+.+++ .+.. +. .|...|.+++|+ +..++++++.
T Consensus 385 ---~~~~-~~~~~~~~~~~~~~~--~~l~~~~-dg~i~iwd~~~g~--~~~~~~~--~~~~~v~~v~~~-~~~l~~~~~~ 452 (464)
T 3v7d_B 385 ---KFSY-HHTNLSAITTFYVSD--NILVSGS-ENQFNIYNLRSGK--LVHANIL--KDADQIWSVNFK-GKTLVAAVEK 452 (464)
T ss_dssp ---EEEE-ECTTCCCEEEEEECS--SEEEEEE-TTEEEEEETTTCC--EEESCTT--TTCSEEEEEEEE-TTEEEEEEEE
T ss_pred ---eeee-cCCCCccEEEEEeCC--CEEEEec-CCeEEEEECCCCc--EEehhhc--cCCCcEEEEEec-CCEEEEEEEe
Confidence 2222 244567788999999 5888888 8999999999985 3443 33 678999999997 4455666677
Q ss_pred CCeEEEEEc
Q 016185 383 DGAIWRWDA 391 (394)
Q Consensus 383 dg~i~iwd~ 391 (394)
||.+.+|-+
T Consensus 453 ~g~~~i~~l 461 (464)
T 3v7d_B 453 DGQSFLEIL 461 (464)
T ss_dssp TTEEEEEEE
T ss_pred CCeEEEEEe
Confidence 776655543
No 45
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9.2e-40 Score=280.49 Aligned_cols=282 Identities=21% Similarity=0.327 Sum_probs=233.3
Q ss_pred eeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEEC
Q 016185 36 LYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV 115 (394)
Q Consensus 36 v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 115 (394)
.++|+||+ + ++||+|.++.|+|||+.+++.++.++.+ .|...|.+++|+ |+++ +|++|+.||.|++||+
T Consensus 28 ~~~l~WS~----~-~~lAvg~D~tV~iWd~~tg~~~~~~~~~---~~~~~V~~v~~~--~~~~-~l~sgs~Dg~v~iw~~ 96 (318)
T 4ggc_A 28 LNLVDWSS----G-NVLAVALDNSVYLWSASSGDILQLLQME---QPGEYISSVAWI--KEGN-YLAVGTSSAEVQLWDV 96 (318)
T ss_dssp CBCEEECT----T-SEEEEEETTEEEEEETTTCCEEEEEECC---STTCCEEEEEEC--TTSS-EEEEEETTSEEEEEET
T ss_pred ceEEEECC----C-CEEEEEeCCEEEEEECCCCCEEEEEEec---CCCCeEEEEEEC--CCCC-EEEEEECCCcEEEeec
Confidence 57899997 3 5888887555999999999988877643 678889999988 9999 9999999999999999
Q ss_pred CCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc-EEEEeec
Q 016185 116 SNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI-CILIFAG 194 (394)
Q Consensus 116 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~~ 194 (394)
++++++..+.+|...+.++.+.+ .++++++. ++.+++|+...+. .+..+.
T Consensus 97 ~~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~-------------------------~~~~~~~~~~~~~~~~~~~~- 147 (318)
T 4ggc_A 97 QQQKRLRNMTSHSARVGSLSWNS---YILSSGSR-------------------------SGHIHHHDVRVAEHHVATLS- 147 (318)
T ss_dssp TTTEEEEEEECCSSCEEEEEEET---TEEEEEET-------------------------TSEEEEEETTSSSCEEEEEE-
T ss_pred CCceeEEEecCccceEEEeecCC---CEEEEEec-------------------------CCceEeeecCCCceeEEEEc-
Confidence 99999999999999888877654 78999999 9999999988764 455566
Q ss_pred cCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe
Q 016185 195 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL 274 (394)
Q Consensus 195 ~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 274 (394)
+|...+..+.+.+ ++.+|++++.||.|++||+++++.. .........|...|.++.+.
T Consensus 148 --~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~-------------------~~~~~~~~~~~~~v~~~~~~ 205 (318)
T 4ggc_A 148 --GHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGG-------------------WVPLQTFTQHQGAVKAVAWC 205 (318)
T ss_dssp --CCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTB-------------------SCCSEEECCCCSCEEEEEEC
T ss_pred --CccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCccc-------------------ccceeeecccCCceEEEEec
Confidence 7999999999999 9999999999999999999884321 12344566678889999887
Q ss_pred ---CcE--EEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 275 ---GDF--ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 275 ---~~~--l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
+.. +++++.++.|++||.+... ......+...+..+.|+|++...++++|+.|+.|++||+.+++
T Consensus 206 ~~~~~~~~~~~~~~~~~i~lwd~~~~~----------~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~ 275 (318)
T 4ggc_A 206 PWQSNVLATGGGTSDRHIRIWNVCSGA----------CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA 275 (318)
T ss_dssp TTSTTEEEEEECTTTCEEEEEETTTCC----------EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC
T ss_pred CCCCcEEEEEecCCCCEEEEEeccccc----------ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc
Confidence 333 4567789999999998764 2233345667999999999953233345589999999999884
Q ss_pred ceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 350 PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 350 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.+..+. +|.+.|++++|+|++++||||+.||+|+|||+.+
T Consensus 276 --~~~~l~--gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 276 --KVAELK--GHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp --EEEEEC--CCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred --EEEEEc--CCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 677787 8999999999999999999999999999999865
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.8e-40 Score=292.05 Aligned_cols=313 Identities=12% Similarity=0.083 Sum_probs=246.6
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCc
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDK 82 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~ 82 (394)
.++|..++...+..... .+....+..| ..+....|+| ++++||+++.|+ |++||+.+++....+. .|
T Consensus 71 l~~~~~d~~v~i~d~~~--~~~~~~~~~~-~~~~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~h 138 (420)
T 3vl1_A 71 LYKARLDGHDFLFNTII--RDGSKMLKRA-DYTAVDTAKL----QMRRFILGTTEGDIKVLDSNFNLQREIDQ-----AH 138 (420)
T ss_dssp EEEEEETTEEEEEECCS--EETTTTSCSC-CEEEEEEECS----SSCEEEEEETTSCEEEECTTSCEEEEETT-----SS
T ss_pred EEEEEcCCcEEEEEecc--cceeeEEecC-CceEEEEEec----CCCEEEEEECCCCEEEEeCCCcceeeecc-----cc
Confidence 45555566555554332 2333344455 4445556777 789999999998 9999999887766655 68
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeee
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLL 162 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~ 162 (394)
...|.+++|+ |+++ +|++|+.|+.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.
T Consensus 139 ~~~v~~~~~~--~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~------------- 201 (420)
T 3vl1_A 139 VSEITKLKFF--PSGE-ALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIID-RGRNVLSASL------------- 201 (420)
T ss_dssp SSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEET-TTTEEEEEET-------------
T ss_pred cCccEEEEEC--CCCC-EEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcC-CCCEEEEEcC-------------
Confidence 8999999998 8998 999999999999999999999999999999999999999 7889999999
Q ss_pred eeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEE---------------------EecCCCCeeEEeeccC
Q 016185 163 LFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSV---------------------DFHPSDIYRIASCGMD 221 (394)
Q Consensus 163 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~---------------------~~~~~~~~~l~s~~~d 221 (394)
|+.|++||+++++.+..+.....+...+.++ +|+| ++.+|++++.|
T Consensus 202 ------------d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d 268 (420)
T 3vl1_A 202 ------------DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVS 268 (420)
T ss_dssp ------------TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETT
T ss_pred ------------CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCC
Confidence 9999999999999998887433344455554 4577 88999999999
Q ss_pred CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEeecCCeEEEecCCCCCCC
Q 016185 222 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQS 298 (394)
Q Consensus 222 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~dg~i~~~d~~~~~~~ 298 (394)
|.|++||+++.+. .......|...|.+++|+ ++ ++++++.||.|++||+++++.
T Consensus 269 g~i~i~d~~~~~~----------------------~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~- 325 (420)
T 3vl1_A 269 GVITVHNVFSKEQ----------------------TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC- 325 (420)
T ss_dssp SCEEEEETTTCCE----------------------EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-
T ss_pred CeEEEEECCCCce----------------------eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC-
Confidence 9999999988431 122334688899999998 55 999999999999999998753
Q ss_pred CCCCcceecccccC-CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCce-e------eEEeccCCccCCeeEEEe
Q 016185 299 PGEGTADILQKYPV-PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV-L------IARLSHAQSKSPIRQTAM 370 (394)
Q Consensus 299 ~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~------~~~~~~~~~~~~v~~~~~ 370 (394)
.+..+.. +...+.++.+ +++ .+|++++.|+.|++|++...+.. . ...+. .|...|.+++|
T Consensus 326 -------~~~~~~~~~~~~v~~~~~-~~~--~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~ 393 (420)
T 3vl1_A 326 -------PVGEFLINEGTPINNVYF-AAG--ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLV--SNDDAVSQFCY 393 (420)
T ss_dssp -------CSEEEEESTTSCEEEEEE-ETT--EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEEC--CSSCCCCEEEE
T ss_pred -------chhhhhccCCCCceEEEe-CCC--CEEEEecCCccEEEEeccCCCCCccceeccCccEEc--cCCcceEEEEE
Confidence 3445554 5667877754 566 58999999999999999874211 1 11222 67789999999
Q ss_pred ccCCC---EEEEeccCCeEEEEEcCC
Q 016185 371 SYDGS---TILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 371 s~~~~---~l~s~~~dg~i~iwd~~~ 393 (394)
+|+++ .|++++.+|.+.+|++++
T Consensus 394 s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 394 VSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCCCcceEEEEcCCceEEEEeccC
Confidence 99999 777788899999999976
No 47
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.2e-40 Score=280.19 Aligned_cols=254 Identities=17% Similarity=0.207 Sum_probs=211.7
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC--CeeEEEEEecCCceeEEEEcCC-CCcEEEEceeeeEEeecc
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN--EKLHKSFVGHGDSINEIRTQPL-KPSLVVSASKVIIISSLS 157 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~~i~~~~~~ 157 (394)
+|.+.|.+++|+ |+|+ +|++|+.|+.|++||+.. .+++.++.+|.++|.+++|+|. ++.+|++++.
T Consensus 7 ~h~~~V~~~~~s--~~g~-~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~-------- 75 (297)
T 2pm7_B 7 AHNEMIHDAVMD--YYGK-RMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------- 75 (297)
T ss_dssp SCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET--------
T ss_pred CCcCceEEEEEC--CCCC-EEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC--------
Confidence 688999999988 9999 999999999999999974 4678899999999999999863 3789999999
Q ss_pred ceeeeeeeccceeeeccCCcEEEEEecCCc--EEEEeeccCCCcccEEEEEecCCC--CeeEEeeccCCcEEEEEccccc
Q 016185 158 LICLLLFIRSNCLRVGQDESVRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 158 ~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
|++|++||+++++ .+..+. +|...|.+++|+| + +.+|++++.|+.|++||++...
T Consensus 76 -----------------D~~v~iWd~~~~~~~~~~~~~---~h~~~v~~v~~~p-~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 76 -----------------DGKVMIWKEENGRWSQIAVHA---VHSASVNSVQWAP-HEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp -----------------TTEEEEEEBSSSCBCCCEEEC---CCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred -----------------CCEEEEEEcCCCceEEEEEee---cCCCceeEEEeCc-CCCCcEEEEEECCCcEEEEEecCCC
Confidence 9999999998874 445555 7999999999999 6 7899999999999999998732
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeC---------------cEEEEeecCCeEEEecCCCCCCC
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG---------------DFILSKSVDNEIVLWEPKMKEQS 298 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~l~~~~~dg~i~~~d~~~~~~~ 298 (394)
. .....+..|...|.+++|++ ++|++++.|+.|++||+++.+.
T Consensus 135 ~---------------------~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~- 192 (297)
T 2pm7_B 135 T---------------------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ- 192 (297)
T ss_dssp C---------------------BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTT-
T ss_pred c---------------------eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCc-
Confidence 0 11345678999999999973 4899999999999999986542
Q ss_pred CCCCcceecccccCCCCCeEEEEEeecCC-cceEEEEeCCCcEEEEEecCCCcee-eEEeccCCccCCeeEEEeccCCCE
Q 016185 299 PGEGTADILQKYPVPECDIWFIKFSCDFH-YNAAAIGNREGKIFVWELQSSPPVL-IARLSHAQSKSPIRQTAMSYDGST 376 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~ 376 (394)
.......+.+|...|.+++|+|++. ..+|++++.|++|++||+....... ...+....|...|.+++|+|++++
T Consensus 193 ----~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 268 (297)
T 2pm7_B 193 ----TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 268 (297)
T ss_dssp ----EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred ----eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCE
Confidence 1224557788999999999999851 2689999999999999998753221 223322367889999999999999
Q ss_pred EEEeccCCeEEEEEcC
Q 016185 377 ILSCCEDGAIWRWDAI 392 (394)
Q Consensus 377 l~s~~~dg~i~iwd~~ 392 (394)
||+++.||.|+||+..
T Consensus 269 las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 269 LALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEETTSCEEEEEEC
T ss_pred EEEEcCCCcEEEEEEC
Confidence 9999999999999976
No 48
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-40 Score=283.92 Aligned_cols=280 Identities=20% Similarity=0.310 Sum_probs=215.7
Q ss_pred eeeecCCCceeeeecccccccceeeee-cc-CccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCC-------ceeE
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKL-QE-GKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEG-------GVIA 72 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~-------~~~~ 72 (394)
..++|..+..+.+.......+.....+ .+ |.+.|++++|+| ++++||+++.|+ |+|||+... +.+.
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp----~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~ 101 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP----HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLA 101 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT----TSSEEEEEETTSCEEEEEC-------CCCEEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC----CCCEEEEEeCCCcEEEEEcccCcCccccceeEE
Confidence 467788888888876655555666666 44 999999999999 789999999998 999998532 2334
Q ss_pred EeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC----CeeEEEEEecCCceeEEEEcCCCCcEEEEce
Q 016185 73 ALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN----EKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148 (394)
Q Consensus 73 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 148 (394)
.+. .|...|.+++|+ |+|+ +|++|+.|+.|++||+.. .+++..+.+|...|.+++|+| ++.+|++++
T Consensus 102 ~~~-----~h~~~V~~v~~s--p~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s 172 (330)
T 2hes_X 102 IIE-----GHENEVKGVAWS--NDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-SEALLASSS 172 (330)
T ss_dssp EEC---------CEEEEEEC--TTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-SSSEEEEEE
T ss_pred EEc-----CCCCcEEEEEEC--CCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-CCCEEEEEc
Confidence 444 688999999988 9998 999999999999999943 256778889999999999999 788999999
Q ss_pred eeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC--cEEEEeeccCCCcccEEEEEecCCC--CeeEEeeccCCcE
Q 016185 149 KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG--ICILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTV 224 (394)
Q Consensus 149 ~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~v 224 (394)
. |++|++||..++ +++..+. +|...|.+++|+| + +.+|++++.|++|
T Consensus 173 ~-------------------------D~~i~iW~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v 223 (330)
T 2hes_X 173 Y-------------------------DDTVRIWKDYDDDWECVAVLN---GHEGTVWSSDFDK-TEGVFRLCSGSDDSTV 223 (330)
T ss_dssp T-------------------------TSCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECC-SSSSCEEEEEETTSCE
T ss_pred C-------------------------CCeEEEEECCCCCeeEEEEcc---CCCCcEEEEEecC-CCCeeEEEEEeCCCeE
Confidence 9 999999999876 5666776 8999999999999 6 6789999999999
Q ss_pred EEEEccccceeeccccccCCCCCCCCccccccceeeeec-CCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCC
Q 016185 225 KIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEG 302 (394)
Q Consensus 225 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 302 (394)
++||++...... .........+.. |...|.+++|+ +.++++++.||.|++||..+++.
T Consensus 224 ~iw~~~~~~~~~---------------~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~----- 283 (330)
T 2hes_X 224 RVWKYMGDDEDD---------------QQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEW----- 283 (330)
T ss_dssp EEEEEEEECTTS---------------CEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEE-----
T ss_pred EEEEecCCCccc---------------cceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCce-----
Confidence 999998732100 000112333443 89999999998 66999999999999999875421
Q ss_pred cceecccccCCCC-CeEEEEEee--cCCcceEEEEeCCCcEEEEEecC
Q 016185 303 TADILQKYPVPEC-DIWFIKFSC--DFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 303 ~~~~~~~~~~~~~-~i~~~~~~~--~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
.........|.. .|.+++|+| ++ .+|++|+.||.|++||+..
T Consensus 284 -~~~~~~~~~h~~~~v~~v~~~~~~~~--~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 284 -KVFAKRALCHGVYEINVVKWLELNGK--TILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp -EEEEEESCTTTTSCEEEEEEC-------CCEEEEETTSEEEEEEC--
T ss_pred -EEEeccccccccceEEEEEEecCCCc--eEEEEecCCCcEEEEEecc
Confidence 001223356665 899999999 45 6899999999999999865
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.3e-40 Score=290.53 Aligned_cols=288 Identities=13% Similarity=0.067 Sum_probs=218.1
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCC--------cEEEEEcCCCce-----eEEeeecccCCcccceEEEEEEEcCCCCc
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGN--------RVTVYQCLEGGV-----IAALQSYVDEDKEESFYTVSWACNVDGIP 99 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d--------~i~vw~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (394)
.-||+|++|+| ++++||+|+.+ .|++|++..+.. +..........|+..+.++++. +.
T Consensus 14 g~PV~sv~fs~----dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~----~~- 84 (365)
T 4h5i_A 14 GYPAYGAKFLN----NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS----KG- 84 (365)
T ss_dssp SSCEEEEEEEE----TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE----TT-
T ss_pred CCCEEEEEEeC----CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC----CC-
Confidence 35899999999 79999998742 399999876532 1222222223566777766654 44
Q ss_pred EEEEe-----------ecCCeEEEEECCCCeeEE----EEE-----ecCCceeEEEEcCCCCcEEE--EceeeeEEeecc
Q 016185 100 FLVAG-----------GINGIIRVIDVSNEKLHK----SFV-----GHGDSINEIRTQPLKPSLVV--SASKVIIISSLS 157 (394)
Q Consensus 100 ~l~s~-----------~~dg~i~vwd~~~~~~~~----~~~-----~~~~~v~~~~~~~~~~~~l~--s~~~~i~~~~~~ 157 (394)
.+++| +.|+.+++|++....... ... .+...+.+++|+| ++++++ +++.
T Consensus 85 ~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~-------- 155 (365)
T 4h5i_A 85 IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKV-------- 155 (365)
T ss_dssp EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCS--------
T ss_pred EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCC--------
Confidence 55544 567889999986543221 111 2345688999999 667655 5556
Q ss_pred ceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeec
Q 016185 158 LICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 158 ~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 237 (394)
|++|++||+++++.+..+. |...|.+++|+| +++++++++.+ .+++|+..+++.
T Consensus 156 -----------------d~~i~iwd~~~~~~~~~~~----~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~--- 209 (365)
T 4h5i_A 156 -----------------PAIMRIIDPSDLTEKFEIE----TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSC--- 209 (365)
T ss_dssp -----------------SCEEEEEETTTTEEEEEEE----CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCE---
T ss_pred -----------------CCEEEEeECCCCcEEEEeC----CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcc---
Confidence 9999999999999998886 788999999999 99999998855 566776666321
Q ss_pred cccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCC----eEEEecCCCCCCCCCCCcceeccccc
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN----EIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
........|...|.+++|+ ++++++++.|+ .+++|++..... .......+.
T Consensus 210 ------------------~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~-----~~~~~~~~~ 266 (365)
T 4h5i_A 210 ------------------IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT-----SVLRSKQVT 266 (365)
T ss_dssp ------------------EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE-----EEEEEEEEE
T ss_pred ------------------eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee-----cceeeeeec
Confidence 1123455688899999998 78999998887 688898876532 111245567
Q ss_pred CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEe-ccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL-SHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
.|...|++++|+|++ .+||+|+.|++|+|||+.+++ .+..+ . +|..+|++++|+|||++||+||.|++|+|||
T Consensus 267 ~~~~~V~~~~~Spdg--~~lasgs~D~~V~iwd~~~~~--~~~~~~~--gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 267 NRFKGITSMDVDMKG--ELAVLASNDNSIALVKLKDLS--MSKIFKQ--AHSFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp SSCSCEEEEEECTTS--CEEEEEETTSCEEEEETTTTE--EEEEETT--SSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred CCCCCeEeEEECCCC--CceEEEcCCCEEEEEECCCCc--EEEEecC--cccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 788899999999999 699999999999999999874 45553 4 8999999999999999999999999999999
Q ss_pred cCC
Q 016185 391 AIP 393 (394)
Q Consensus 391 ~~~ 393 (394)
+.+
T Consensus 341 ip~ 343 (365)
T 4h5i_A 341 LPL 343 (365)
T ss_dssp CCT
T ss_pred cCC
Confidence 853
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-40 Score=284.14 Aligned_cols=296 Identities=17% Similarity=0.198 Sum_probs=227.4
Q ss_pred eeeecCCCceeeeecccccccceeee-eccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc--eeEEeeecc
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNK-LQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG--VIAALQSYV 78 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~--~~~~~~~~~ 78 (394)
..|+|..+..+.+............. ..+|...|++++|+| ++++||+++.|+ +++|+...+. .+..+.
T Consensus 30 ~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp----~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~--- 102 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP----CGNYLASASFDATTCIWKKNQDDFECVTTLE--- 102 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT----TSSEEEEEETTSCEEEEEECCC-EEEEEEEC---
T ss_pred EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC----CCCEEEEEECCCcEEEEEccCCCeEEEEEcc---
Confidence 36777788887777655444333333 378999999999999 789999999998 9999987764 344454
Q ss_pred cCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC---eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEee
Q 016185 79 DEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE---KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISS 155 (394)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~ 155 (394)
.|...|.+++|+ |+++ +|++|+.|+.|++||+.++ +++..+.+|...|.+++|+| ++.+|++++.
T Consensus 103 --~h~~~v~~v~~s--p~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~------ 170 (345)
T 3fm0_A 103 --GHENEVKSVAWA--PSGN-LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASY------ 170 (345)
T ss_dssp --CCSSCEEEEEEC--TTSS-EEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEEEEET------
T ss_pred --CCCCCceEEEEe--CCCC-EEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEEEEeC------
Confidence 688999999998 9999 9999999999999999865 34667788999999999999 7789999999
Q ss_pred ccceeeeeeeccceeeeccCCcEEEEEecCCcE--EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccc
Q 016185 156 LSLICLLLFIRSNCLRVGQDESVRLWNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
|+.|++||.++++. ...+. +|...|.+++|+| ++.+|++++.|++|++||.....
T Consensus 171 -------------------d~~i~~w~~~~~~~~~~~~~~---~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 171 -------------------DDTVKLYREEEDDWVCCATLE---GHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp -------------------TSCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTT
T ss_pred -------------------CCcEEEEEecCCCEEEEEEec---CCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCC
Confidence 99999999988753 35555 8999999999999 99999999999999999975522
Q ss_pred eeeccccccCCCCCCCCccccccceeeeec-CCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY 310 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 310 (394)
...... ..........+..+.+ |...|.+++|+ +..+++++.|+.|++|+...................
T Consensus 228 ~~~~~~--------~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~ 299 (345)
T 3fm0_A 228 NEQGVA--------CSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLH 299 (345)
T ss_dssp CTTCCC--------CC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEET
T ss_pred CCccce--------eeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeec
Confidence 110000 0000011122334444 88899999998 789999999999999998765422111111122334
Q ss_pred cCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 311 PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 311 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
..|...|++++|+|++. .+|++|+.||.|++|++.+++
T Consensus 300 ~~h~~~V~~v~~~p~~~-~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 300 QAHSQDVNCVAWNPKEP-GLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp TSSSSCEEEEEECSSST-TEEEEEETTSCEEEEEECC--
T ss_pred ccccCcEeEeEEeCCCc-eEEEEcCCCCcEEEEEecCCC
Confidence 67899999999999874 489999999999999998874
No 51
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.9e-40 Score=295.10 Aligned_cols=277 Identities=23% Similarity=0.368 Sum_probs=238.1
Q ss_pred ccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCC
Q 016185 30 QEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGING 108 (394)
Q Consensus 30 ~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg 108 (394)
.+|...|+|++|. ++++++|+.|+ |++||+.+++.+..+. .|...|.+++| +++ +|++|+.||
T Consensus 130 ~~~~~~v~~~~~d------~~~l~~g~~dg~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~----~~~-~l~sg~~dg 193 (435)
T 1p22_A 130 SETSKGVYCLQYD------DQKIVSGLRDNTIKIWDKNTLECKRILT-----GHTGSVLCLQY----DER-VIITGSSDS 193 (435)
T ss_dssp CSSCCCEEEEECC------SSEEEEEESSSCEEEEESSSCCEEEEEC-----CCSSCEEEEEC----CSS-EEEEEETTS
T ss_pred cCCCCcEEEEEEC------CCEEEEEeCCCeEEEEeCCCCeEEEEEc-----CCCCcEEEEEE----CCC-EEEEEcCCC
Confidence 4577789998873 67899999998 9999999999888877 68889988876 566 999999999
Q ss_pred eEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcE
Q 016185 109 IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGIC 188 (394)
Q Consensus 109 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~ 188 (394)
.|++||+.+++.+..+.+|...|.+++|++ ..+++++. ||.|++||+++++.
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~-------------------------dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSK-------------------------DRSIAVWDMASPTD 245 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEET-------------------------TSCEEEEECSSSSC
T ss_pred eEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeC-------------------------CCcEEEEeCCCCCC
Confidence 999999999999999999999999999975 58999999 99999999998876
Q ss_pred EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCce
Q 016185 189 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 268 (394)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 268 (394)
........+|...|.+++| +++++++|+.||.|++||+++ ...+..+..|...|
T Consensus 246 ~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~-----------------------~~~~~~~~~~~~~v 299 (435)
T 1p22_A 246 ITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTST-----------------------CEFVRTLNGHKRGI 299 (435)
T ss_dssp CEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTT-----------------------CCEEEEEECCSSCE
T ss_pred ceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCc-----------------------CcEEEEEcCCCCcE
Confidence 5322222389999999999 457899999999999999998 44577888999999
Q ss_pred EEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 269 DCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 269 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
.++.++++++++++.||.|++||+++++ .+..+..|...|.+++| ++ .++++|+.||.|++||+.++
T Consensus 300 ~~~~~~~~~l~~g~~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~~~~--~~--~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 300 ACLQYRDRLVVSGSSDNTIRLWDIECGA---------CLRVLEGHEELVRCIRF--DN--KRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTCC---------EEEEECCCSSCEEEEEC--CS--SEEEEEETTSCEEEEEHHHH
T ss_pred EEEEeCCCEEEEEeCCCeEEEEECCCCC---------EEEEEeCCcCcEEEEEe--cC--CEEEEEeCCCcEEEEECCCC
Confidence 9999999999999999999999999876 67788889999999998 55 58999999999999999765
Q ss_pred Cc-------eeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 349 PP-------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 349 ~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.. ..+..+. +|.+.|++++| ++++|++++.||.|++||+.+
T Consensus 367 ~~~~~~~~~~~~~~~~--~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 367 LDPRAPAGTLCLRTLV--EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp TSTTSCTTTTEEEEEC--CCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred CCccccccchheeecc--CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 31 1456666 88999999999 788999999999999999864
No 52
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-40 Score=298.90 Aligned_cols=300 Identities=12% Similarity=0.099 Sum_probs=229.5
Q ss_pred cceeeee-ccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCC---CceeEEeeecccCCcccceEEEEEEEcCCC
Q 016185 23 YRVTNKL-QEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLE---GGVIAALQSYVDEDKEESFYTVSWACNVDG 97 (394)
Q Consensus 23 ~~~~~~~-~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 97 (394)
-++...+ ++|.++|++++|+|. ++++||+|+.|+ |+|||+.+ +........+ .|...|.+++|+ |++
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~---~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~---~h~~~v~~~~~~--~~~ 123 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPG---ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY---DCSSTVTQITMI--PNF 123 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECS---SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE---ECSSCEEEEEEC--TTS
T ss_pred ceEEeeeccCCCCceEEEEECCC---CCCEEEEecCCceEEEeECcccccCcccceeeec---cCCCCEEEEEEe--CCC
Confidence 3556667 899999999999982 478999999998 99999876 4322111111 478899999998 889
Q ss_pred CcEEEEeecCCeEEEEECC---CCeeEEEEEecCCceeEEEEcCC---------------CCcEEEEceeeeEEeeccce
Q 016185 98 IPFLVAGGINGIIRVIDVS---NEKLHKSFVGHGDSINEIRTQPL---------------KPSLVVSASKVIIISSLSLI 159 (394)
Q Consensus 98 ~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~---------------~~~~l~s~~~~i~~~~~~~~ 159 (394)
+ +|++|+.||.|++||+. +++....+..| .+..+.|+|. ++.+|++++.
T Consensus 124 ~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------- 190 (437)
T 3gre_A 124 D-AFAVSSKDGQIIVLKVNHYQQESEVKFLNCE--CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN---------- 190 (437)
T ss_dssp S-EEEEEETTSEEEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET----------
T ss_pred C-EEEEEeCCCEEEEEEeccccCCceeeccccc--eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC----------
Confidence 8 99999999999999994 56666655544 4555554431 4556666666
Q ss_pred eeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCC--CcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeec
Q 016185 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGG--HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 160 ~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 237 (394)
|+.|++||+++++.+..+. + |...|++++|+| ++.+|++|+.||.|++||++++
T Consensus 191 ---------------d~~i~iwd~~~~~~~~~~~---~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~----- 246 (437)
T 3gre_A 191 ---------------LSRVIIFDIRTLERLQIIE---NSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFN----- 246 (437)
T ss_dssp ---------------TSEEEEEETTTCCEEEEEE---CCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTT-----
T ss_pred ---------------CCeEEEEeCCCCeeeEEEc---cCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCc-----
Confidence 9999999999999999988 5 889999999999 8999999999999999999983
Q ss_pred cccccCCCCCCCCccccccceeeee-cCCCceEEEEEe------CcEEEEeecCCeEEEecCCCCCCCCCCC--------
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYVDCNRWL------GDFILSKSVDNEIVLWEPKMKEQSPGEG-------- 302 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~------~~~l~~~~~dg~i~~~d~~~~~~~~~~~-------- 302 (394)
.++..+. .|...|.++.|+ +.++++++.||.|++||+++++......
T Consensus 247 ------------------~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 308 (437)
T 3gre_A 247 ------------------VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSM 308 (437)
T ss_dssp ------------------EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCG
T ss_pred ------------------cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCcc
Confidence 3455554 677889999775 4499999999999999998765210000
Q ss_pred -ccee----c--ccccC--CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEecc---------------
Q 016185 303 -TADI----L--QKYPV--PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH--------------- 358 (394)
Q Consensus 303 -~~~~----~--~~~~~--~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------------- 358 (394)
.... + ..+.+ |...|++++|+ ++ .+|++|+.|+.|++||+.+++. ...+..
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~--~~l~s~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 383 (437)
T 3gre_A 309 EHFLPIEKGLEELNFCGIRSLNALSTISVS-ND--KILLTDEATSSIVMFSLNELSS--SKAVISPSRFSDVFIPTQVTA 383 (437)
T ss_dssp GGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT--EEEEEEGGGTEEEEEETTCGGG--CEEEECC--CCCEEEEEEEET
T ss_pred ceecccccccccceecccccCCceEEEEEC-Cc--eEEEecCCCCeEEEEECCCccc--ceEEecccccCceEEEEEeec
Confidence 0000 0 01222 66779999999 66 6999999999999999988753 222220
Q ss_pred --------------------CCccCCeeEEEeccC--CCEEEEeccCCeEEEEE
Q 016185 359 --------------------AQSKSPIRQTAMSYD--GSTILSCCEDGAIWRWD 390 (394)
Q Consensus 359 --------------------~~~~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd 390 (394)
..|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 384 NLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp TEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 128899999999998 78999999999999995
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.2e-40 Score=330.60 Aligned_cols=346 Identities=18% Similarity=0.277 Sum_probs=286.3
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
..++|..++.+.+... ...+....+.+|.+.|++++|+| ++++||+++.|+ |+|||+.+++.+..+. .
T Consensus 629 ~l~s~~~d~~i~vw~~--~~~~~~~~~~~h~~~v~~~~~s~----~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-----~ 697 (1249)
T 3sfz_A 629 RIASCGADKTLQVFKA--ETGEKLLDIKAHEDEVLCCAFSS----DDSYIATCSADKKVKIWDSATGKLVHTYD-----E 697 (1249)
T ss_dssp EEEEEETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECT----TSSEEEEEETTSEEEEEETTTCCEEEEEE-----C
T ss_pred EEEEEeCCCeEEEEEC--CCCCEEEEeccCCCCEEEEEEec----CCCEEEEEeCCCeEEEEECCCCceEEEEc-----C
Confidence 3566777776666543 44456778899999999999999 789999999998 9999999999888887 6
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeecc--
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLS-- 157 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~-- 157 (394)
|...|.+++|++..++. ++++|+.||.|++||+.++++...+.+|...|.+++|+| ++.++++++. .+++|+..
T Consensus 698 ~~~~v~~~~~~~~~~~~-~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 698 HSEQVNCCHFTNKSNHL-LLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp CSSCEEEEEECSSSSCC-EEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGT
T ss_pred CCCcEEEEEEecCCCce-EEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCC
Confidence 88899999998433566 899999999999999999999999999999999999999 7788888876 89999862
Q ss_pred -------------------------ceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCC
Q 016185 158 -------------------------LICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI 212 (394)
Q Consensus 158 -------------------------~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 212 (394)
..++.+.+++..++++.++.+.+||+.++.....+.. +|...|.+++|+| ++
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~v~~~~~sp-~~ 852 (1249)
T 3sfz_A 776 NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHT--GHHSTIQYCDFSP-YD 852 (1249)
T ss_dssp EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEEC--SSSSCCCEEEECS-ST
T ss_pred cccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcC--CCCCceEEEEEcC-CC
Confidence 2234455667777777799999999999988877763 6899999999999 99
Q ss_pred eeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEe
Q 016185 213 YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLW 290 (394)
Q Consensus 213 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~ 290 (394)
.++++++.||.|++||+.+ ...+..+.+|...|.+++|+ ++++++++.||.|++|
T Consensus 853 ~~l~~~~~dg~v~vwd~~~-----------------------~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw 909 (1249)
T 3sfz_A 853 HLAVIALSQYCVELWNIDS-----------------------RLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVW 909 (1249)
T ss_dssp TEEEEECSSSCEEEEETTT-----------------------TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CEEEEEeCCCeEEEEEcCC-----------------------CceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEE
Confidence 9999999999999999998 44577888999999999998 7799999999999999
Q ss_pred cCCCCCCCCCCCcce-----------------------e-----cccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEE
Q 016185 291 EPKMKEQSPGEGTAD-----------------------I-----LQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFV 342 (394)
Q Consensus 291 d~~~~~~~~~~~~~~-----------------------~-----~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i 342 (394)
|+.+........... . ......+...+.+++|+|++ .++++|+.+|.|++
T Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g--~~l~~g~~~g~i~i 987 (1249)
T 3sfz_A 910 ETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL--EYVAFGDEDGAIKI 987 (1249)
T ss_dssp EHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS--SEEEEEETTSCCEE
T ss_pred EccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC--CEEEEEcCCCCEEE
Confidence 976532111000000 0 00011234579999999999 69999999999999
Q ss_pred EEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 343 WELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 343 wd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
||+.+++ ....+. +|...|++++|+|++++|++++.||.|++||+.+
T Consensus 988 ~d~~~~~--~~~~~~--~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 988 IELPNNR--VFSSGV--GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp EETTTTS--CEEECC--CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred EEcCCCc--eeeecc--cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 9999874 455666 8889999999999999999999999999999865
No 54
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-40 Score=317.09 Aligned_cols=359 Identities=9% Similarity=0.028 Sum_probs=258.7
Q ss_pred eeeecCCCceeeeeccccccccee---------eeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeE
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVT---------NKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIA 72 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~---------~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~ 72 (394)
..++|+.++.+.+.+......... ..+++|.++|++++|+|+ ++.++++|+.|+ | +||+.+++.+.
T Consensus 112 ~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~---~~~~l~~g~~dg~v-lWd~~~~~~~~ 187 (902)
T 2oaj_A 112 WMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR---DIGTVLISYEYVTL-TYSLVENEIKQ 187 (902)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT---EEEEEEEECSSCEE-EEETTTTEEEE
T ss_pred EEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC---CCCEEEEEeCCCcE-EEECCCCceEE
Confidence 356778888877776544332111 345789999999999992 467899999998 8 99999998887
Q ss_pred Eeeecc-------------cCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEE--EE---e--------
Q 016185 73 ALQSYV-------------DEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS--FV---G-------- 126 (394)
Q Consensus 73 ~~~~~~-------------~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~---~-------- 126 (394)
.+..+. ...|...|.+++|+ |+|+ +|++|+.||.|++||+.+++++.. +. .
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs--pdg~-~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~ 264 (902)
T 2oaj_A 188 SFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH--PNSL-HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYI 264 (902)
T ss_dssp EECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC--TTSS-EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCC
T ss_pred EEecccCCcCCCcccccccccccCCCeEEEEEc--CCCC-EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCC
Confidence 776441 12345789999988 9999 999999999999999999887654 21 1
Q ss_pred -----cCCceeEEEEc----CCCCcEEEEcee-------eeEEeecc----------------------c----------
Q 016185 127 -----HGDSINEIRTQ----PLKPSLVVSASK-------VIIISSLS----------------------L---------- 158 (394)
Q Consensus 127 -----~~~~v~~~~~~----~~~~~~l~s~~~-------~i~~~~~~----------------------~---------- 158 (394)
|...|.+++|+ |+++.++++|+. .+.+|+.+ .
T Consensus 265 ~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 344 (902)
T 2oaj_A 265 RDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVP 344 (902)
T ss_dssp CCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSC
T ss_pred CCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCc
Confidence 34579999995 423467777743 46666531 0
Q ss_pred -eeeeee-----------eccceeeeccCCcEEEEEecCCcEEEE-------ee--------------------------
Q 016185 159 -ICLLLF-----------IRSNCLRVGQDESVRLWNVQTGICILI-------FA-------------------------- 193 (394)
Q Consensus 159 -~~~~~~-----------~~~~~~~~~~d~~i~vwd~~~~~~~~~-------~~-------------------------- 193 (394)
....+. +...+++++.|+.|++||+.++..... +.
T Consensus 345 v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~ 424 (902)
T 2oaj_A 345 IVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAA 424 (902)
T ss_dssp EEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTT
T ss_pred eEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcc
Confidence 011110 112578888899999999877643322 00
Q ss_pred -----ccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceee--e-----
Q 016185 194 -----GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI--A----- 261 (394)
Q Consensus 194 -----~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----- 261 (394)
.+.+|...+.+++|+| ++++|++|+.|++|++||+.++... ...... +
T Consensus 425 ~~~~~~l~G~~~~v~sv~~sp-dg~~laSgs~DgtVrlWd~~~g~~~-------------------~~~~~~~~l~~~~~ 484 (902)
T 2oaj_A 425 QNKDYLLKGGVRTKRQKLPAE-YGTAFITGHSNGSVRIYDASHGDIQ-------------------DNASFEVNLSRTLN 484 (902)
T ss_dssp BCCCCSCCCSBCCCCCCCCCS-EEEEEEEEETTSEEEEEESSCCTTT-------------------TTBCEEEEHHHHTT
T ss_pred cCCCCcccCCcCCCCcccccc-cCcEEEEecCCCcEEEEECCCcccc-------------------CCceEEeechhhcC
Confidence 0124444555566788 8999999999999999999884210 000111 1
Q ss_pred ecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCC------------------------------------CCc
Q 016185 262 SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPG------------------------------------EGT 303 (394)
Q Consensus 262 ~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~------------------------------------~~~ 303 (394)
.+|...|.+++|+ +++|++|+.||+|++||+.+++.... ...
T Consensus 485 ~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 564 (902)
T 2oaj_A 485 KAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQG 564 (902)
T ss_dssp CSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEE
T ss_pred CCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCc
Confidence 2789999999998 88999999999999999987632100 000
Q ss_pred ceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec-cC-CccCCeeEEEec-----cCC--
Q 016185 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS-HA-QSKSPIRQTAMS-----YDG-- 374 (394)
Q Consensus 304 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~-~~~~~v~~~~~s-----~~~-- 374 (394)
.+++..+..|...|++++|+|++ +||+|+.|++|++||+.+........+. .. +|.+.|++++|+ |||
T Consensus 565 ~~~~~~l~~h~~~V~svafSpdG---~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 565 FMPSTAVHANKGKTSAINNSNIG---FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEEEECCCSCSEEEEEECBTS---EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSE
T ss_pred cceeEEEEcCCCcEEEEEecCCc---EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCc
Confidence 13456677899999999999999 7999999999999998776321111332 33 889999999999 885
Q ss_pred -CEEEEeccCCeEEEEEc
Q 016185 375 -STILSCCEDGAIWRWDA 391 (394)
Q Consensus 375 -~~l~s~~~dg~i~iwd~ 391 (394)
++|++|+.|++|++||+
T Consensus 642 ~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 642 SILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEETTSEEEEEEE
T ss_pred ceEEEEEecCCcEEEEEE
Confidence 89999999999999998
No 55
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.1e-40 Score=288.44 Aligned_cols=254 Identities=17% Similarity=0.207 Sum_probs=205.7
Q ss_pred eeeeccCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 26 TNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
.....+|...|++++|+| ++.+++++.++.|+|||+.+++...... +....|...|.+++|+ |+++ +|++|+
T Consensus 87 ~~~~~~~~~~V~~~~~s~----d~~~l~~s~dg~v~lWd~~~~~~~~~~~-~~~~~h~~~V~~v~~s--pdg~-~l~sgs 158 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVS----EKGILVASDSGAVELWEILEKESLLVNK-FAKYEHDDIVKTLSVF--SDGT-QAVSGG 158 (357)
T ss_dssp CSEEEECSSCEEEEEEET----TTEEEEEETTSCEEEC--------CCCC-EEECCCSSCEEEEEEC--SSSS-EEEEEE
T ss_pred ecccCCCCCCEEEEEEcC----CCCEEEEECCCEEEEeeccccceeEEEe-eccCCCCCCEEEEEEC--CCCC-EEEEEe
Confidence 344467999999999999 6776665544449999998887543322 1123688999999988 9999 999999
Q ss_pred cCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC
Q 016185 106 INGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT 185 (394)
Q Consensus 106 ~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~ 185 (394)
.||.|++||+.+++++..+.+|...|.+++|+|++..++++++. |+.|++||+++
T Consensus 159 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~-------------------------dg~v~~wd~~~ 213 (357)
T 4g56_B 159 KDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGE-------------------------DGRILLWDTRK 213 (357)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEET-------------------------TSCEEECCTTS
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeecc-------------------------CCceEEEECCC
Confidence 99999999999999999999999999999999966678999998 99999999999
Q ss_pred CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCC
Q 016185 186 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 265 (394)
Q Consensus 186 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (394)
++....+.. ..+...+.+++|+|.++.+|++|+.|+.|++||+++ ..++..+..|.
T Consensus 214 ~~~~~~~~~-~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-----------------------~~~~~~~~~~~ 269 (357)
T 4g56_B 214 PKPATRIDF-CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-----------------------PDSAQTSAVHS 269 (357)
T ss_dssp SSCBCBCCC-TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-----------------------GGGCEEECCCS
T ss_pred Cceeeeeee-ccccccccchhhhhcccceEEEeecccceeEEECCC-----------------------CcEeEEEeccc
Confidence 887665542 246778999999995567899999999999999998 44577888999
Q ss_pred CceEEEEEe--C-cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEee-cCCcceEEEEeCCCcEE
Q 016185 266 NYVDCNRWL--G-DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC-DFHYNAAAIGNREGKIF 341 (394)
Q Consensus 266 ~~i~~~~~~--~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l~~~~~dg~i~ 341 (394)
..|.+++|+ + ++|++++.|++|++||+++++ .+ ....|...|++++|+| ++ .+|++++.||+|+
T Consensus 270 ~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---------~~-~~~~H~~~V~~vafsP~d~--~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 270 QNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---------VF-RDLSHRDFVTGVAWSPLDH--SKFTTVGWDHKVL 337 (357)
T ss_dssp SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---------EE-EECCCSSCEEEEEECSSST--TEEEEEETTSCEE
T ss_pred eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---------Ee-EECCCCCCEEEEEEeCCCC--CEEEEEcCCCeEE
Confidence 999999997 3 589999999999999998775 33 3347889999999999 56 6899999999999
Q ss_pred EEEecCC
Q 016185 342 VWELQSS 348 (394)
Q Consensus 342 iwd~~~~ 348 (394)
+|++...
T Consensus 338 iW~~~~~ 344 (357)
T 4g56_B 338 HHHLPSE 344 (357)
T ss_dssp EEECC--
T ss_pred EEECCCC
Confidence 9999764
No 56
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.5e-40 Score=315.37 Aligned_cols=292 Identities=19% Similarity=0.267 Sum_probs=254.2
Q ss_pred cceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEE
Q 016185 23 YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFL 101 (394)
Q Consensus 23 ~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 101 (394)
+++.+.+.+|.+.|++++|+| ++.+||+++.++ |+|||+.+++.+..+. .|..+|.+++|+ |+++ +|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp----~~~~la~~~~~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s--~~~~-~l 70 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHP----TEPWVLTTLYSGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFI--ARKN-WI 70 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECS----SSSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEE--GGGT-EE
T ss_pred cccceeeecCCCceEEEEECC----CCCEEEEEeCCCEEEEEECCCCceEEEEe-----cCCCcEEEEEEe--CCCC-EE
Confidence 456788899999999999999 799999999988 9999999999888887 688899999999 8998 99
Q ss_pred EEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEE
Q 016185 102 VAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLW 181 (394)
Q Consensus 102 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vw 181 (394)
++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++. ||.|++|
T Consensus 71 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~-------------------------dg~i~vw 124 (814)
T 3mkq_A 71 IVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSD-------------------------DLTVKLW 124 (814)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS-SSSEEEEEET-------------------------TSEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeC-CCCEEEEEcC-------------------------CCEEEEE
Confidence 9999999999999999999999999999999999999 7788999999 9999999
Q ss_pred EecCC-cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceee
Q 016185 182 NVQTG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 260 (394)
Q Consensus 182 d~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (394)
|++++ .....+. +|...|.+++|+|.++..|++++.||.|++||+.... +...
T Consensus 125 ~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~-----------------------~~~~ 178 (814)
T 3mkq_A 125 NWENNWALEQTFE---GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST-----------------------PNFT 178 (814)
T ss_dssp EGGGTSEEEEEEE---CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS-----------------------CSEE
T ss_pred ECCCCceEEEEEc---CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------------------ceeE
Confidence 99987 5666776 7999999999999667899999999999999998732 3334
Q ss_pred eec-CCCceEEEEEe----CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEe
Q 016185 261 ASV-HSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 261 ~~~-~~~~i~~~~~~----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 335 (394)
+.. +...+.+++|+ +.++++++.||.|++||+++++ .+..+..|...|.+++|+|++ .++++++
T Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~--~~l~~~~ 247 (814)
T 3mkq_A 179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS---------CVATLEGHMSNVSFAVFHPTL--PIIISGS 247 (814)
T ss_dssp EECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE---------EEEEEECCSSCEEEEEECSSS--SEEEEEE
T ss_pred EecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc---------EEEEEcCCCCCEEEEEEcCCC--CEEEEEe
Confidence 443 44788999985 6799999999999999998765 567778888999999999999 6999999
Q ss_pred CCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCE-EEEeccCCeEEEEEcCC
Q 016185 336 REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGST-ILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~ 393 (394)
.||.|++||+.+++ ....+. .|...+.+++|+|++.. +++++.|+.+.+|++..
T Consensus 248 ~dg~v~vwd~~~~~--~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 248 EDGTLKIWNSSTYK--VEKTLN--VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp TTSCEEEEETTTCS--EEEEEC--CSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred CCCeEEEEECCCCc--EEEEee--cCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 99999999999874 566666 77789999999999873 24445577888998753
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.4e-40 Score=296.91 Aligned_cols=302 Identities=15% Similarity=0.146 Sum_probs=229.6
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
..+++++|+| ++++|++++.|+ |++||+.+++....+. .+ ..+....|+ ++++ +|++|+.||.|++
T Consensus 57 ~~~~~~~~s~----~g~~l~~~~~d~~v~i~d~~~~~~~~~~~-----~~-~~~~~~~~~--~~~~-~l~~~~~dg~i~i 123 (420)
T 3vl1_A 57 DAGKGNTFEK----VGSHLYKARLDGHDFLFNTIIRDGSKMLK-----RA-DYTAVDTAK--LQMR-RFILGTTEGDIKV 123 (420)
T ss_dssp BCCTTCEEEE----EETTEEEEEETTEEEEEECCSEETTTTSC-----SC-CEEEEEEEC--SSSC-EEEEEETTSCEEE
T ss_pred ccccceeeee----cCCeEEEEEcCCcEEEEEecccceeeEEe-----cC-CceEEEEEe--cCCC-EEEEEECCCCEEE
Confidence 3456899999 789999999988 9999988876544443 22 223333444 8898 9999999999999
Q ss_pred EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEe
Q 016185 113 IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIF 192 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 192 (394)
||+.+++....+.+|...|.+++|+| ++.+|++++. |+.|++||+++++.+..+
T Consensus 124 wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~-------------------------d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 124 LDSNFNLQREIDQAHVSEITKLKFFP-SGEALISSSQ-------------------------DMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp ECTTSCEEEEETTSSSSCEEEEEECT-TSSEEEEEET-------------------------TSEEEEEETTTCCCCEEE
T ss_pred EeCCCcceeeecccccCccEEEEECC-CCCEEEEEeC-------------------------CCeEEEEeCCCCcCceEE
Confidence 99999988888889999999999999 7789999999 999999999999998888
Q ss_pred eccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccc----ccceeeeecCCCce
Q 016185 193 AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV----QFPVFIASVHSNYV 268 (394)
Q Consensus 193 ~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i 268 (394)
. +|...|.+++|+| ++.+|++++.||.|++||+++++............ . ..... .........+...+
T Consensus 178 ~---~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~-~--~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 178 I---GHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPH-D--GVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp E---CCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTT-C--CEEEEEEEECCCSSCGGGCCCCC
T ss_pred c---CCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCC-C--CccEEEEecCCcceeeecccCcc
Confidence 8 8999999999999 99999999999999999999854322111000000 0 00000 00000011233445
Q ss_pred EEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEec
Q 016185 269 DCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 346 (394)
Q Consensus 269 ~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 346 (394)
.+++|+ ++++++++.||.|++||+++++. .......|...+.+++|+|++. .+|++|+.||.|++||+.
T Consensus 251 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~-~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 251 NNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ--------TIQLPSKFTCSCNSLTVDGNNA-NYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp CTTCSSCTTEEEEEEETTSCEEEEETTTCCE--------EEEECCTTSSCEEEEEECSSCT-TEEEEEETTSEEEEEETT
T ss_pred cceEEcCCCCEEEEEcCCCeEEEEECCCCce--------eEEcccccCCCceeEEEeCCCC-CEEEEEeCCCeEEEEEcC
Confidence 555555 77999999999999999988752 2233345778999999999994 389999999999999999
Q ss_pred CCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 347 SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+++. .+..+.. .|...|..+.+ +++++|++++.||.|++|++..
T Consensus 322 ~~~~-~~~~~~~-~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 322 SPEC-PVGEFLI-NEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp CTTS-CSEEEEE-STTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred CCcC-chhhhhc-cCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence 8753 3444441 35677888855 5788999999999999999864
No 58
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.9e-40 Score=332.40 Aligned_cols=337 Identities=14% Similarity=0.177 Sum_probs=282.2
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecc----
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYV---- 78 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~---- 78 (394)
.++|..+....+.. ....+....+.+|.+.|++++|+| +++++++++.|+ |++||+.+++....+....
T Consensus 716 l~sg~~d~~v~vwd--~~~~~~~~~~~~h~~~v~~~~~sp----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~ 789 (1249)
T 3sfz_A 716 LATGSNDFFLKLWD--LNQKECRNTMFGHTNSVNHCRFSP----DDELLASCSADGTLRLWDVRSANERKSINVKRFFLS 789 (1249)
T ss_dssp EEEEETTSCEEEEE--TTSSSEEEEECCCSSCEEEEEECS----STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--
T ss_pred EEEEeCCCeEEEEE--CCCcchhheecCCCCCEEEEEEec----CCCEEEEEECCCeEEEEeCCCCcccceecccccccc
Confidence 44566666655554 344456677889999999999999 788999999998 9999998876554443110
Q ss_pred ----------------------------------------------cCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 79 ----------------------------------------------DEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 79 ----------------------------------------------~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
...|...+.+++|+ |++. ++++++.||.|++
T Consensus 790 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~s--p~~~-~l~~~~~dg~v~v 866 (1249)
T 3sfz_A 790 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFS--PYDH-LAVIALSQYCVEL 866 (1249)
T ss_dssp ------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEEC--SSTT-EEEEECSSSCEEE
T ss_pred cCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEc--CCCC-EEEEEeCCCeEEE
Confidence 11466778888877 8998 9999999999999
Q ss_pred EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeeccc--------------------------------
Q 016185 113 IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLSL-------------------------------- 158 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~~-------------------------------- 158 (394)
||+.+++.+..+.+|...|.+++|+| ++..+++++. .+++|+...
T Consensus 867 wd~~~~~~~~~~~~h~~~v~~v~~sp-dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1249)
T 3sfz_A 867 WNIDSRLKVADCRGHLSWVHGVMFSP-DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRG 945 (1249)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSS
T ss_pred EEcCCCceeeecCCCccceEEEEECC-CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcc
Confidence 99999999999999999999999999 7788888876 889997421
Q ss_pred -------------------eeeeeee-ccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEee
Q 016185 159 -------------------ICLLLFI-RSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218 (394)
Q Consensus 159 -------------------~~~~~~~-~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~ 218 (394)
.++.+.+ ...+++|+.+|.|++||+.+++....+. +|...|.+++|+| ++.+|+++
T Consensus 946 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~---~h~~~v~~l~~s~-dg~~l~s~ 1021 (1249)
T 3sfz_A 946 LQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV---GHKKAVRHIQFTA-DGKTLISS 1021 (1249)
T ss_dssp EEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC---CCSSCCCCEEECS-SSSCEEEE
T ss_pred eEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc---cCCCceEEEEECC-CCCEEEEE
Confidence 2222333 3467788899999999999999888887 8999999999999 99999999
Q ss_pred ccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCC
Q 016185 219 GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQ 297 (394)
Q Consensus 219 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~ 297 (394)
+.||.|++||+.+++ ......|...|.++.|+ +..+++++.||.|++||+.+++
T Consensus 1022 ~~dg~i~vwd~~~~~------------------------~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~- 1076 (1249)
T 3sfz_A 1022 SEDSVIQVWNWQTGD------------------------YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR- 1076 (1249)
T ss_dssp CSSSBEEEEETTTTE------------------------EECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTC-
T ss_pred cCCCEEEEEECCCCc------------------------eEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCc-
Confidence 999999999998843 22455789999999998 6789999999999999999876
Q ss_pred CCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEE
Q 016185 298 SPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTI 377 (394)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 377 (394)
....+..|...|.+++|+|++ .++++++.|+.|++||+.+++ ....+. +|...|++++|+|++++|
T Consensus 1077 --------~~~~~~~~~~~v~~~~~s~d~--~~l~s~s~d~~v~iwd~~~~~--~~~~l~--~h~~~v~~~~~s~dg~~l 1142 (1249)
T 3sfz_A 1077 --------IERDFTCHQGTVLSCAISSDA--TKFSSTSADKTAKIWSFDLLS--PLHELK--GHNGCVRCSAFSLDGILL 1142 (1249)
T ss_dssp --------CCEEEECCSSCCCCEEECSSS--SSCEEECCSSCCCEECSSSSS--CSBCCC--CCSSCEEEEEECSSSSEE
T ss_pred --------eeEEEcccCCcEEEEEECCCC--CEEEEEcCCCcEEEEECCCcc--eeeeec--cCCCcEEEEEECCCCCEE
Confidence 566778889999999999999 689999999999999998875 455565 888999999999999999
Q ss_pred EEeccCCeEEEEEcCC
Q 016185 378 LSCCEDGAIWRWDAIP 393 (394)
Q Consensus 378 ~s~~~dg~i~iwd~~~ 393 (394)
++++.||.|++||+.+
T Consensus 1143 at~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1143 ATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp EEEETTSCCCEEESSS
T ss_pred EEEeCCCEEEEEECCC
Confidence 9999999999999874
No 59
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-41 Score=303.19 Aligned_cols=293 Identities=10% Similarity=-0.006 Sum_probs=220.9
Q ss_pred CccceeEEEEEeeCCC-----cceEEEE-------------------ecCCc-EEEEEcCCCceeEEeeecccCCcccce
Q 016185 32 GKRPLYAVVFNFIDSR-----YFNVFAT-------------------VGGNR-VTVYQCLEGGVIAALQSYVDEDKEESF 86 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~-----~~~~las-------------------~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v 86 (394)
+.+.|++|+|+|+... .+++||+ ++.|+ |+||++.+++....... ....|.+.|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~-~l~~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQ-TIVHSFGEV 210 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEE-EEEECCCSE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEE-EEEecCCcE
Confidence 5789999999994311 1166666 44666 99999987764221110 001467789
Q ss_pred EEEEEEEc----CCCCcEEEEeecCCeEEEEECCCCee-----------EEEEEecCCceeEEEEcCCCCcEEEEceeee
Q 016185 87 YTVSWACN----VDGIPFLVAGGINGIIRVIDVSNEKL-----------HKSFVGHGDSINEIRTQPLKPSLVVSASKVI 151 (394)
Q Consensus 87 ~~~~~~~~----~~~~~~l~s~~~dg~i~vwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i 151 (394)
..++|++. +++. +||+++.||+|++||+.+++. ...+.+|...|.+++|++ + ..|++|+.
T Consensus 211 ~~v~wsp~~~~~~~~~-~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~-- 285 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVG-CLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFK-- 285 (524)
T ss_dssp EEEEECSSCCCSSSSC-EEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEET--
T ss_pred EEEEECCCCCCCCCCc-eEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeC--
Confidence 99999843 2356 999999999999999976532 346788999999999998 4 47999999
Q ss_pred EEeeccceeeeeeeccceeeeccCCcEEEEEecCCc-EEEEeeccCCCcccEEEE--EecCCCC-eeEEeeccCCcEEEE
Q 016185 152 IISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI-CILIFAGAGGHRNEVLSV--DFHPSDI-YRIASCGMDNTVKIW 227 (394)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~i~~~--~~~~~~~-~~l~s~~~dg~v~iw 227 (394)
||+|++||+++++ ....+. +|...|+++ +|+| ++ .+|++|+.|++|++|
T Consensus 286 -----------------------DgtV~lWD~~~~~~~~~~~~---~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklW 338 (524)
T 2j04_B 286 -----------------------NGFVAEFDLTDPEVPSFYDQ---VHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIF 338 (524)
T ss_dssp -----------------------TSEEEEEETTBCSSCSEEEE---CSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEE
T ss_pred -----------------------CCEEEEEECCCCCCceEEee---cccccEEEEEEEcCC-CCCeEEEEeccCCeEEEE
Confidence 9999999998764 344566 799999999 5677 76 899999999999999
Q ss_pred EccccceeeccccccCCCCCCCCccccccceeeeecCCC--ceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCc
Q 016185 228 SMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN--YVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGT 303 (394)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 303 (394)
|+++++ ....+.+|.. .|.+++|+ ++.+++++.|++|++||++++.
T Consensus 339 D~~~~~-----------------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~------- 388 (524)
T 2j04_B 339 NPKDIA-----------------------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF------- 388 (524)
T ss_dssp CGGGHH-----------------------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT-------
T ss_pred ECCCCC-----------------------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc-------
Confidence 999833 3334445543 47889998 6689999999999999999865
Q ss_pred ceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc---------------------------------
Q 016185 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--------------------------------- 350 (394)
Q Consensus 304 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------------------------- 350 (394)
.+..+.+|...|++++|+|++ .+|++|+.||+|++||+.....
T Consensus 389 --~~~~l~gH~~~V~sva~Sp~g--~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~ 464 (524)
T 2j04_B 389 --AVHPLVSRETTITAIGVSRLH--PMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSY 464 (524)
T ss_dssp --CCEEEEECSSCEEEEECCSSC--CBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCC
T ss_pred --cceeeecCCCceEEEEeCCCC--CeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCc
Confidence 445677899999999999999 6899999999999998642100
Q ss_pred ---------eeeEEeccCCccCCeeEEEeccCCC---EEEEeccCCeEEEEEcCC
Q 016185 351 ---------VLIARLSHAQSKSPIRQTAMSYDGS---TILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 351 ---------~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~i~iwd~~~ 393 (394)
..... ..+|...|.+++|+|++. +||+|+.||.|+||++.-
T Consensus 465 ~~~~~~~~g~~~~~--l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 465 EVYPLTVNDVSKAK--IDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp CCCC---------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred eecccccCCcceee--ecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 00111 236888999999999954 999999999999999863
No 60
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.3e-39 Score=280.69 Aligned_cols=244 Identities=16% Similarity=0.224 Sum_probs=216.0
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
+|...|++++|+ |+++ +|++|+.||.|++||..+++....+..|...|.+++|+| ++.++++++.
T Consensus 62 gH~~~V~~~~~s--~d~~-~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp-~g~~lasg~~----------- 126 (354)
T 2pbi_B 62 GHGNKVLCMDWC--KDKR-RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP-SGCAIACGGL----------- 126 (354)
T ss_dssp CCSSCEEEEEEC--TTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECT-TSSEEEEEST-----------
T ss_pred CCCCeEEEEEEC--CCCC-EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECC-CCCEEEEeeC-----------
Confidence 789999999998 9998 999999999999999999999999999999999999999 8899999999
Q ss_pred eeeeeccceeeeccCCcEEEEEecCC------cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccce
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTG------ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWT 234 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 234 (394)
|+.+++|++... .....+. +|...|.+++|+| ++..|++++.|++|++||+++
T Consensus 127 --------------d~~i~v~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~--- 185 (354)
T 2pbi_B 127 --------------DNKCSVYPLTFDKNENMAAKKKSVA---MHTNYLSACSFTN-SDMQILTASGDGTCALWDVES--- 185 (354)
T ss_dssp --------------TSEEEEEECCCCTTCCSGGGCEEEE---ECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTT---
T ss_pred --------------CCCEEEEEEeccccccccccceeee---ccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCC---
Confidence 999999998643 2344455 6999999999999 888999999999999999998
Q ss_pred eeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe----CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc
Q 016185 235 YVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY 310 (394)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 310 (394)
...+..+.+|...|.++.+. ++++++++.||.|++||+++++ .+..+
T Consensus 186 --------------------~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~---------~~~~~ 236 (354)
T 2pbi_B 186 --------------------GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ---------CVQAF 236 (354)
T ss_dssp --------------------CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC---------EEEEE
T ss_pred --------------------CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc---------EEEEe
Confidence 34577888999999999985 5799999999999999999876 67778
Q ss_pred cCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 311 PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 311 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
..|...|++++|+|++ .+|++++.|+.|++||++..+ .+..+....+...+.+++|+|++++|++|+.|+.|++||
T Consensus 237 ~~h~~~v~~v~~~p~~--~~l~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 237 ETHESDVNSVRYYPSG--DAFASGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWD 312 (354)
T ss_dssp CCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCCCCeEEEEEeCCC--CEEEEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEE
Confidence 8899999999999999 689999999999999998873 344444334556799999999999999999999999999
Q ss_pred cCC
Q 016185 391 AIP 393 (394)
Q Consensus 391 ~~~ 393 (394)
+.+
T Consensus 313 ~~~ 315 (354)
T 2pbi_B 313 VLK 315 (354)
T ss_dssp TTT
T ss_pred CCC
Confidence 854
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-39 Score=281.78 Aligned_cols=279 Identities=15% Similarity=0.206 Sum_probs=234.0
Q ss_pred CccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeE
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGII 110 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i 110 (394)
|.++|.+++|+| +|++++++..+. +.+|+........... .|...|.+++|+ |+++ +|++++ ||.|
T Consensus 8 ~~~~v~~~~~s~----dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~--~~~~-~l~~~~-dg~i 74 (337)
T 1gxr_A 8 GSKPAYSFHVTA----DGQMQPVPFPPDALIGPGIPRHARQINTL-----NHGEVVCAVTIS--NPTR-HVYTGG-KGCV 74 (337)
T ss_dssp EEEECCEEEECS----SSCEEECCCCTTSSSSTTCCSEEEEEEEE-----CCSSCCCEEEEC--SSSS-EEEEEC-BSEE
T ss_pred cCCceeEEEECC----CCCEEEeecCCCcEeccccCCccccceec-----cCCCceEEEEEe--cCCc-EEEEcC-CCeE
Confidence 567899999999 799998887666 6666544433322222 588899999998 9999 899998 9999
Q ss_pred EEEECCCCe---eEEEEE--ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC
Q 016185 111 RVIDVSNEK---LHKSFV--GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT 185 (394)
Q Consensus 111 ~vwd~~~~~---~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~ 185 (394)
++||+.+++ ....+. .|...|.+++|+| ++++|++++. |+.|++||+++
T Consensus 75 ~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-------------------------d~~i~~~d~~~ 128 (337)
T 1gxr_A 75 KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGE-------------------------ASTLSIWDLAA 128 (337)
T ss_dssp EEEETTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEES-------------------------SSEEEEEECCC
T ss_pred EEEECCCCCceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcC-------------------------CCcEEEEECCC
Confidence 999998764 334444 7899999999999 7789999998 99999999998
Q ss_pred Cc--EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeec
Q 016185 186 GI--CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 263 (394)
Q Consensus 186 ~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (394)
++ ....+. .|...|.+++|+| ++++|++++.||.|++||+++ ..++..+..
T Consensus 129 ~~~~~~~~~~---~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~-----------------------~~~~~~~~~ 181 (337)
T 1gxr_A 129 PTPRIKAELT---SSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHN-----------------------QTLVRQFQG 181 (337)
T ss_dssp C--EEEEEEE---CSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT-----------------------TEEEEEECC
T ss_pred CCcceeeecc---cCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCC-----------------------Cceeeeeec
Confidence 87 455555 7899999999999 999999999999999999998 345667788
Q ss_pred CCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEE
Q 016185 264 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIF 341 (394)
Q Consensus 264 ~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~ 341 (394)
|...+.+++|+ ++++++++.||.|++||+++++ .+..+ .+...+.+++|+|++ .++++++.|+.|+
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---------~~~~~-~~~~~v~~~~~s~~~--~~l~~~~~~~~i~ 249 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR---------QLQQH-DFTSQIFSLGYCPTG--EWLAVGMESSNVE 249 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---------EEEEE-ECSSCEEEEEECTTS--SEEEEEETTSCEE
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc---------eEeee-cCCCceEEEEECCCC--CEEEEEcCCCcEE
Confidence 99999999997 7799999999999999998775 33333 356789999999999 6899999999999
Q ss_pred EEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 342 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 342 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+||+.+++ ...+. .|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 250 ~~~~~~~~---~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 250 VLHVNKPD---KYQLH--LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp EEETTSSC---EEEEC--CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEECCCCC---eEEEc--CCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 99998874 23445 7889999999999999999999999999999875
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.1e-39 Score=275.11 Aligned_cols=258 Identities=19% Similarity=0.291 Sum_probs=209.6
Q ss_pred eeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCC--ceeEEeeecccCCcccceEEEEEEEcCCCCcEEEE
Q 016185 27 NKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEG--GVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVA 103 (394)
Q Consensus 27 ~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s 103 (394)
..+.+|.+.|++++|+| +|++||+|+.|+ |+|||+..+ +.+..+. +|.++|.+++|+...+++ +|++
T Consensus 3 ~~~~~h~~~V~~~~~s~----~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-----gH~~~V~~v~~s~~~~g~-~l~s 72 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY----YGKRMATCSSDKTIKIFEVEGETHKLIDTLT-----GHEGPVWRVDWAHPKFGT-ILAS 72 (297)
T ss_dssp EECCSCSSCEEEEEECT----TSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-----CCSSCEEEEEECCGGGCS-EEEE
T ss_pred eeccCCcCceEEEEECC----CCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-----cccCCeEEEEecCCCcCC-EEEE
Confidence 35689999999999999 799999999999 999998743 4556665 788999999997333477 9999
Q ss_pred eecCCeEEEEECCCCe--eEEEEEecCCceeEEEEcCCC-CcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEE
Q 016185 104 GGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLK-PSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRL 180 (394)
Q Consensus 104 ~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~v 180 (394)
|+.|++|++||+.+++ .+..+.+|...|.+++|+|+. +.+|++++. |+.|++
T Consensus 73 ~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~-------------------------d~~v~~ 127 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS-------------------------DGKVSV 127 (297)
T ss_dssp EETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET-------------------------TSEEEE
T ss_pred EcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC-------------------------CCcEEE
Confidence 9999999999998774 566778899999999999942 689999999 999999
Q ss_pred EEecCCcE--EEEeeccCCCcccEEEEEecCCC-------------CeeEEeeccCCcEEEEEccccceeeccccccCCC
Q 016185 181 WNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSD-------------IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 245 (394)
Q Consensus 181 wd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~-------------~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 245 (394)
||++++.. ...+. +|...|.+++|+| + +.+|++|+.|++|++||+++.+..
T Consensus 128 wd~~~~~~~~~~~~~---~h~~~v~~~~~~p-~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~---------- 193 (297)
T 2pm7_B 128 VEFKENGTTSPIIID---AHAIGVNSASWAP-ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT---------- 193 (297)
T ss_dssp EEBCSSSCBCCEEEE---CCSSCEEEEEECC-CC------------CCEEEEEETTSCEEEEEEETTTTE----------
T ss_pred EEecCCCceeeeeee---cccCccceEeecC-CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce----------
Confidence 99987632 34455 7999999999999 5 468999999999999999873210
Q ss_pred CCCCCccccccceeeeecCCCceEEEEEeC-----cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEE
Q 016185 246 PSKFPTKYVQFPVFIASVHSNYVDCNRWLG-----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 320 (394)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 320 (394)
......+.+|...|.+++|++ ++|++++.|++|++||++...... ...+.....+...|.++
T Consensus 194 ---------~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~----~~~~~~~~~~~~~v~~~ 260 (297)
T 2pm7_B 194 ---------YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPW----KKTLLKEEKFPDVLWRA 260 (297)
T ss_dssp ---------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC----EEEESSSSCCSSCEEEE
T ss_pred ---------EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcc----ceeeeecccCCCcEEEE
Confidence 113456789999999999983 689999999999999998643110 00111224567789999
Q ss_pred EEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 321 KFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 321 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
+|+|++ .+|++++.|+.|++|+....
T Consensus 261 ~~s~~g--~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 261 SWSLSG--NVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EECSSS--CCEEEEETTSCEEEEEECTT
T ss_pred EECCCC--CEEEEEcCCCcEEEEEECCC
Confidence 999999 68999999999999998743
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.8e-40 Score=281.59 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=203.7
Q ss_pred eeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCce--eEEeeecccCCcccceEEEEEEEcCCCCcEEEEe
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGV--IAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~ 104 (394)
.+.+|.+.|++++|+| +|++||+|+.|+ |+|||+.+++. +..+. +|...|.+++|+...+++ +|++|
T Consensus 8 ~~~~H~~~V~~v~~s~----~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~-----gH~~~V~~v~~~~~~~~~-~l~s~ 77 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDY----YGTRLATCSSDRSVKIFDVRNGGQILIADLR-----GHEGPVWQVAWAHPMYGN-ILASC 77 (316)
T ss_dssp ------CCEEEEEECG----GGCEEEEEETTTEEEEEEEETTEEEEEEEEE-----CCSSCEEEEEECCGGGSS-CEEEE
T ss_pred ecccccCeEEEeeEcC----CCCEEEEEeCCCeEEEEEecCCCcEEEEEEc-----CCCccEEEEEeCCCCCCC-EEEEE
Confidence 4579999999999999 799999999998 99999987753 44455 788999999997322477 99999
Q ss_pred ecCCeEEEEECCCC--eeEEEEEecCCceeEEEEcCCC-CcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEE
Q 016185 105 GINGIIRVIDVSNE--KLHKSFVGHGDSINEIRTQPLK-PSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLW 181 (394)
Q Consensus 105 ~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vw 181 (394)
+.|++|++||++++ +....+.+|...|.+++|+|++ +.+|++++. |+.|++|
T Consensus 78 s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~-------------------------D~~i~lw 132 (316)
T 3bg1_A 78 SYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS-------------------------DGAISLL 132 (316)
T ss_dssp ETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS-------------------------SSCEEEE
T ss_pred ECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC-------------------------CCCEEEE
Confidence 99999999999877 4566788899999999999942 689999999 9999999
Q ss_pred EecCCcEEEEeeccCCCcccEEEEEecCCC-----------------CeeEEeeccCCcEEEEEccccceeeccccccCC
Q 016185 182 NVQTGICILIFAGAGGHRNEVLSVDFHPSD-----------------IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 182 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
|++.+..........+|...|.+++|+| + +.+|++|+.|+.|++||++....
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~---------- 201 (316)
T 3bg1_A 133 TYTGEGQWEVKKINNAHTIGCNAVSWAP-AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ---------- 201 (316)
T ss_dssp EECSSSCEEECCBTTSSSSCBCCCEECC-CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC----------
T ss_pred ecCCCCCcceeeeeccccCCcceEEEcc-ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc----------
Confidence 9987643332233347999999999998 5 46899999999999999975210
Q ss_pred CCCCCCccccccceeeeecCCCceEEEEEeC------cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeE
Q 016185 245 LPSKFPTKYVQFPVFIASVHSNYVDCNRWLG------DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 318 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~ 318 (394)
..++..+.+|...|.+++|++ ++|++++.|++|++||++....... ....+..|...|+
T Consensus 202 ----------~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~-----~~~~~~~~~~~v~ 266 (316)
T 3bg1_A 202 ----------WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTW-----SPKLLHKFNDVVW 266 (316)
T ss_dssp ----------EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCC-----BCCEEEECSSCEE
T ss_pred ----------cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccch-----hhhhhhcCCCcEE
Confidence 123556788999999999973 6899999999999999886321000 1122345678899
Q ss_pred EEEEeecCCcceEEEEeCCCcEEEEEecC
Q 016185 319 FIKFSCDFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
+++|+|++ .+|++++.|+.|++|+...
T Consensus 267 ~v~~sp~g--~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 267 HVSWSITA--NILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEECTTT--CCEEEEESSSCEEEEEECT
T ss_pred EEEEcCCC--CEEEEEcCCCeEEEEEECC
Confidence 99999999 6899999999999999864
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=283.22 Aligned_cols=317 Identities=16% Similarity=0.218 Sum_probs=241.9
Q ss_pred ceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeee--------cccCCcccceEEEEEEEc
Q 016185 24 RVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQS--------YVDEDKEESFYTVSWACN 94 (394)
Q Consensus 24 ~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~--------~~~~~~~~~v~~~~~~~~ 94 (394)
+....+++|.++|++++|+|. ++++||+++.|+ |++||+.+++....+.. .....|...|.+++|+
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-- 108 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPV---EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWY-- 108 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTT---TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEEC--
T ss_pred cceeeeeccCCcEEEEEEecC---CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEc--
Confidence 445667889999999999982 578999999998 99999998765444331 1112588999999998
Q ss_pred C-CCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCC--CcEEEEceeeeEEeeccceeeeeeeccceee
Q 016185 95 V-DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLK--PSLVVSASKVIIISSLSLICLLLFIRSNCLR 171 (394)
Q Consensus 95 ~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~ 171 (394)
| ++. ++++++.||.|++||+.+++....+. +...+.++.|+|.. +.++++++.
T Consensus 109 ~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 164 (408)
T 4a11_B 109 PHDTG-MFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTR---------------------- 164 (408)
T ss_dssp TTCTT-CEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEES----------------------
T ss_pred cCCCc-EEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcC----------------------
Confidence 8 555 99999999999999999998888877 77889999999843 348999998
Q ss_pred eccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccccceeeccccccCCCCCCCC
Q 016185 172 VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
|+.|++||+++++.+..+. +|...|.+++|+| ++. +|++++.||.|++||++.............
T Consensus 165 ---~~~v~~~d~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~------- 230 (408)
T 4a11_B 165 ---GPKVQLCDLKSGSCSHILQ---GHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHN------- 230 (408)
T ss_dssp ---SSSEEEEESSSSCCCEEEC---CCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTT-------
T ss_pred ---CCeEEEEeCCCcceeeeec---CCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccc-------
Confidence 9999999999999888887 7999999999999 766 689999999999999988542111100000
Q ss_pred ccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCc
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHY 328 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (394)
.............|...|.+++|+ ++++++++.||.|++||+++++....... .........+ ...+.....
T Consensus 231 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~- 304 (408)
T 4a11_B 231 GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYG----KVCNNSKKGL-KFTVSCGCS- 304 (408)
T ss_dssp TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCC----CCCCCCSSCC-CCEECCSSS-
T ss_pred cccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccc----cccccccccc-eeEEecCCC-
Confidence 000111223446789999999997 77999999999999999998763211100 0000111111 122222222
Q ss_pred ceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 329 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
..+++++.|+.|++||+.+++ .+..+. +|...|++++|+|++++|++++.||.|++||+.+
T Consensus 305 ~~~~~~~~~~~i~v~d~~~~~--~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 305 SEFVFVPYGSTIAVYTVYSGE--QITMLK--GHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp SCEEEEEETTEEEEEETTTCC--EEEEEC--CCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred ceEEEEecCCEEEEEECcCCc--ceeeec--cCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 467778889999999999874 567777 8889999999999999999999999999999875
No 65
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.3e-40 Score=289.26 Aligned_cols=262 Identities=17% Similarity=0.296 Sum_probs=221.0
Q ss_pred EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCC
Q 016185 60 VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPL 139 (394)
Q Consensus 60 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 139 (394)
+..|+..+......++ +|.+.|++++|+ |+++ +|++|+.||+|++||+.+++....+..|...|.+++|+|
T Consensus 48 ~~~~~~~~~~~~~~l~-----gH~~~V~~~~~s--p~~~-~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~- 118 (380)
T 3iz6_a 48 AVSFNPTDLVCCRTLQ-----GHSGKVYSLDWT--PEKN-WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP- 118 (380)
T ss_dssp CCCCCCCCCEEEEEEC-----CCSSCEEEEEEC--TTSS-CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-
T ss_pred ccccccceeEEeeccc-----ccccEEEEEEEc--CCCC-EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-
Confidence 5567766666667777 789999999998 9998 999999999999999999999999999999999999999
Q ss_pred CCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc-------EEEEeeccCCCcccEEEEEecCCCC
Q 016185 140 KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI-------CILIFAGAGGHRNEVLSVDFHPSDI 212 (394)
Q Consensus 140 ~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~ 212 (394)
++.+|++++. |+.+++||+.+.. ....+. +|...|.++.|.|.++
T Consensus 119 ~g~~las~~~-------------------------d~~v~iw~~~~~~~~~~~~~~~~~~~---gh~~~v~~~~~~~~~~ 170 (380)
T 3iz6_a 119 NGQSVACGGL-------------------------DSACSIFNLSSQADRDGNMPVSRVLT---GHKGYASSCQYVPDQE 170 (380)
T ss_dssp TSSEEEECCS-------------------------SSCCEEEECCCCSSCCCSSTTCCBCC---CCSSCCCCCBCCSSSS
T ss_pred CCCEEEEeeC-------------------------CCcEEEEECCCCccccCCccceeecc---CCCcceEEEEEecCCC
Confidence 7899999999 9999999986532 223344 8999999999999556
Q ss_pred eeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeee-----ecCCCceEEEEEe---CcEEEEeecC
Q 016185 213 YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-----SVHSNYVDCNRWL---GDFILSKSVD 284 (394)
Q Consensus 213 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~---~~~l~~~~~d 284 (394)
..|++|+.|++|++||+++++. +..+ .+|...|.++.+. ++++++|+.|
T Consensus 171 ~~l~s~s~D~~i~~wd~~~~~~-----------------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D 227 (380)
T 3iz6_a 171 TRLITGSGDQTCVLWDVTTGQR-----------------------ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD 227 (380)
T ss_dssp SCEEEECTTSCEEEECTTTCCE-----------------------EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT
T ss_pred CEEEEECCCCcEEEEEcCCCcE-----------------------EEEeecccCCCCccCeEEEEeecCCCCEEEEEECC
Confidence 7899999999999999998432 2222 5788999999995 6799999999
Q ss_pred CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEecc-----C
Q 016185 285 NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH-----A 359 (394)
Q Consensus 285 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~ 359 (394)
+.|++||++.... .+..+.+|...|++++|+|++ .+|++|+.||+|++||+.+++ .+..+.. .
T Consensus 228 ~~v~~wd~~~~~~--------~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 228 TTVRLWDLRITSR--------AVRTYHGHEGDINSVKFFPDG--QRFGTGSDDGTCRLFDMRTGH--QLQVYNREPDRND 295 (380)
T ss_dssp SCEEEEETTTTCC--------CCEEECCCSSCCCEEEECTTS--SEEEEECSSSCEEEEETTTTE--EEEEECCCCSSSC
T ss_pred CeEEEEECCCCCc--------ceEEECCcCCCeEEEEEecCC--CeEEEEcCCCeEEEEECCCCc--EEEEecccccccc
Confidence 9999999985432 567788899999999999999 689999999999999999874 3444431 1
Q ss_pred CccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 360 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.+...|++++|+|+|++|++|+.||.|++||+.+
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT
T ss_pred cccCceEEEEECCCCCEEEEEECCCCEEEEECCC
Confidence 2234589999999999999999999999999753
No 66
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.5e-39 Score=273.89 Aligned_cols=240 Identities=21% Similarity=0.302 Sum_probs=210.5
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC-----CeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-----EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISS 155 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~ 155 (394)
+|.+.|.+++|+ |++..+|++|+.|++|++|++.. +.++..+.+|...|.+++|+| ++.+|++++.
T Consensus 15 gH~~~V~~l~~~--~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~------ 85 (319)
T 3frx_A 15 GHNGWVTSLATS--AGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASW------ 85 (319)
T ss_dssp CCSSCEEEEEEC--SSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEET------
T ss_pred cccceEEEEEcc--CCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeC------
Confidence 799999999988 76634999999999999999863 345778899999999999999 8899999999
Q ss_pred ccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEcccccee
Q 016185 156 LSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 235 (394)
|++|++||+++++.+..+. +|...|.+++|+| ++.+|++|+.|++|++||++.
T Consensus 86 -------------------D~~v~~wd~~~~~~~~~~~---~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~---- 138 (319)
T 3frx_A 86 -------------------DKTLRLWDVATGETYQRFV---GHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKG---- 138 (319)
T ss_dssp -------------------TSEEEEEETTTTEEEEEEE---CCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTS----
T ss_pred -------------------CCEEEEEECCCCCeeEEEc---cCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC----
Confidence 9999999999999999988 8999999999999 999999999999999999975
Q ss_pred eccccccCCCCCCCCccccccceeeeecCCCceEEEEEeC--------cEEEEeecCCeEEEecCCCCCCCCCCCcceec
Q 016185 236 VEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG--------DFILSKSVDNEIVLWEPKMKEQSPGEGTADIL 307 (394)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 307 (394)
..+..+.+|...|.++.+.+ ..+++++.|+.|++||+++.+ ..
T Consensus 139 --------------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---------~~ 189 (319)
T 3frx_A 139 --------------------QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ---------IE 189 (319)
T ss_dssp --------------------CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE---------EE
T ss_pred --------------------CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch---------hh
Confidence 23567788999999999962 389999999999999998765 56
Q ss_pred ccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEE
Q 016185 308 QKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 387 (394)
Q Consensus 308 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 387 (394)
..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++ .+..+. . ...|.+++|+|++.+|++++.+ .++
T Consensus 190 ~~~~~h~~~v~~~~~sp~g--~~l~s~~~dg~i~iwd~~~~~--~~~~~~--~-~~~v~~~~~sp~~~~la~~~~~-~i~ 261 (319)
T 3frx_A 190 ADFIGHNSNINTLTASPDG--TLIASAGKDGEIMLWNLAAKK--AMYTLS--A-QDEVFSLAFSPNRYWLAAATAT-GIK 261 (319)
T ss_dssp EEECCCCSCEEEEEECTTS--SEEEEEETTCEEEEEETTTTE--EEEEEE--C-CSCEEEEEECSSSSEEEEEETT-EEE
T ss_pred eeecCCCCcEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCc--EEEEec--C-CCcEEEEEEcCCCCEEEEEcCC-CcE
Confidence 6788899999999999999 699999999999999999874 555555 2 3689999999999999988754 599
Q ss_pred EEEcCC
Q 016185 388 RWDAIP 393 (394)
Q Consensus 388 iwd~~~ 393 (394)
+|++.+
T Consensus 262 v~~~~~ 267 (319)
T 3frx_A 262 VFSLDP 267 (319)
T ss_dssp EEEETT
T ss_pred EEEeCc
Confidence 999763
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.1e-39 Score=300.16 Aligned_cols=301 Identities=16% Similarity=0.169 Sum_probs=247.5
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCC----ceeEEeeecccCCcccc-eEEEEEEEcC--CCCcEEEE
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEG----GVIAALQSYVDEDKEES-FYTVSWACNV--DGIPFLVA 103 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~----~~~~~~~~~~~~~~~~~-v~~~~~~~~~--~~~~~l~s 103 (394)
.|.+.|++++|+| ++++||+++++.|++||+.++ +....+. .|... |.+++|+ | +++ +|++
T Consensus 16 ~~~~~v~~~~~sp----dg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~-----~h~~~~v~~~~~s--p~~~~~-~l~s 83 (615)
T 1pgu_A 16 TQRNFTTHLSYDP----TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFT-----GHGSSVVTTVKFS--PIKGSQ-YLCS 83 (615)
T ss_dssp CCTTCCCCCEEET----TTTEEEEEETTEEEEEECCSSCCSSCSEEEEC-----TTTTSCEEEEEEC--SSTTCC-EEEE
T ss_pred CccCceeEEEECC----CCCEEEEecCCeEEEEECCCCCCccccceEEe-----cCCCceEEEEEEC--cCCCCC-EEEE
Confidence 6889999999999 799999999666999999988 7777776 68888 9999998 8 998 9999
Q ss_pred eecCCeEEEEECCCC--------eeEEEEEecCCceeEEEEcCCCCcEEEEcee------eeEEeecc------------
Q 016185 104 GGINGIIRVIDVSNE--------KLHKSFVGHGDSINEIRTQPLKPSLVVSASK------VIIISSLS------------ 157 (394)
Q Consensus 104 ~~~dg~i~vwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------~i~~~~~~------------ 157 (394)
|+.||.|++||+.++ +....+..|...|.+++|+| ++.+|++++. .+.+|+..
T Consensus 84 ~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 162 (615)
T 1pgu_A 84 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQR 162 (615)
T ss_dssp EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSC
T ss_pred ecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEECCCcceeeecCCcc
Confidence 999999999999744 67788888999999999999 6777777763 67777642
Q ss_pred ceeeeeeecc--ceeeeccCCcEEEEEecCCcEEEEeeccCCCcc---cEEEEEecCCC-CeeEEeeccCCcEEEEEccc
Q 016185 158 LICLLLFIRS--NCLRVGQDESVRLWNVQTGICILIFAGAGGHRN---EVLSVDFHPSD-IYRIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 158 ~~~~~~~~~~--~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~ 231 (394)
+.++.+.+++ .+++++.|+.|++||+++++.+..+. +|.. .|.+++|+| + +++|++++.||.|++||+++
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~ 238 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR---THHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKS 238 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC---SSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTT
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec---ccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCC
Confidence 2344445554 58999999999999999999999888 7888 999999999 7 99999999999999999988
Q ss_pred cceeeccccccCCCCCCCCccccccceeee-e---cCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCccee
Q 016185 232 FWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-S---VHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADI 306 (394)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 306 (394)
+ ..+..+ . .|...|.++.|+ ++++++++.|+.|++||+++++ .
T Consensus 239 ~-----------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~---------~ 286 (615)
T 1pgu_A 239 G-----------------------EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK---------C 286 (615)
T ss_dssp C-----------------------CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE---------E
T ss_pred C-----------------------CEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCc---------E
Confidence 3 345555 4 799999999995 8899999999999999999765 3
Q ss_pred cccccCC----CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEecc
Q 016185 307 LQKYPVP----ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE 382 (394)
Q Consensus 307 ~~~~~~~----~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 382 (394)
+..+..+ ...+.++.|. ++ .++++++.||.|++||+.++ ..+..+. +|...|++++| |+ |++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~--~~l~~~~~~g~i~~~d~~~~--~~~~~~~--~~~~~v~~~~~-~~---l~~~~~ 355 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVAT-GN--GRIISLSLDGTLNFYELGHD--EVLKTIS--GHNKGITALTV-NP---LISGSY 355 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEE-ET--TEEEEEETTSCEEEEETTEE--EEEEEEC--CCSSCEEEEET-TT---TEEEET
T ss_pred EEEEcCCCCcccCceeEEEeC-CC--CeEEEEECCCCEEEEECCCC--cEEEEEe--CCCCCEEEEEe-cC---cEEECC
Confidence 4444444 3567888886 55 58999999999999999875 3555665 67777777777 66 666666
Q ss_pred CCeEEEEEc
Q 016185 383 DGAIWRWDA 391 (394)
Q Consensus 383 dg~i~iwd~ 391 (394)
||.|++||+
T Consensus 356 dg~i~~w~~ 364 (615)
T 1pgu_A 356 DGRIMEWSS 364 (615)
T ss_dssp TSCEEETTT
T ss_pred CCeEEEEEc
Confidence 666666664
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=281.88 Aligned_cols=298 Identities=12% Similarity=0.143 Sum_probs=235.3
Q ss_pred cccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCC-Ccee-EEeeecccCCcccceEEEEEEE
Q 016185 17 PSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLE-GGVI-AALQSYVDEDKEESFYTVSWAC 93 (394)
Q Consensus 17 ~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~-~~~~-~~~~~~~~~~~~~~v~~~~~~~ 93 (394)
.+...+++....+++|.+.|++++|+|+. .+|++|++++.|+ |++||+.+ +..+ ..+. .|...|.+++|+
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~~- 95 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPT-LPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ-----MHTGPVLDVCWS- 95 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTT-SSSEEEEEEETTSEEEEEEECTTSCEEEEEEE-----ECSSCEEEEEEC-
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCC-CCceEEEEECCCCcEEEEEcCCCCceeEEEec-----cccCCEEEEEEC-
Confidence 34556777888889999999999999920 1169999999998 99999987 4444 4454 588899999998
Q ss_pred cCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEE--cCCCCcEEEEceeeeEEeeccceeeeeeeccceee
Q 016185 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT--QPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLR 171 (394)
Q Consensus 94 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~ 171 (394)
|+++ +|++++.||.|++||+.+++.+. +..|...|.+++| +| ++.+|++++.
T Consensus 96 -~~~~-~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~---------------------- 149 (368)
T 3mmy_A 96 -DDGS-KVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSW---------------------- 149 (368)
T ss_dssp -TTSS-EEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEET----------------------
T ss_pred -cCCC-EEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccC----------------------
Confidence 8998 99999999999999999888766 5669999999999 78 7789999999
Q ss_pred eccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCc
Q 016185 172 VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 251 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 251 (394)
|+.|++||+++++.+..+. ....+.++.+.+ ..+++++.++.+++|+++......
T Consensus 150 ---dg~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~--------------- 204 (368)
T 3mmy_A 150 ---DKTLKFWDTRSSNPMMVLQ----LPERCYCADVIY---PMAVVATAERGLIVYQLENQPSEF--------------- 204 (368)
T ss_dssp ---TSEEEEECSSCSSCSEEEE----CSSCEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEE---------------
T ss_pred ---CCcEEEEECCCCcEEEEEe----cCCCceEEEecC---CeeEEEeCCCcEEEEEeccccchh---------------
Confidence 9999999999999888887 345677777765 367888889999999998843211
Q ss_pred cccccceeeeecCCCceEEEEE--eCc----EEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCC----------
Q 016185 252 KYVQFPVFIASVHSNYVDCNRW--LGD----FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC---------- 315 (394)
Q Consensus 252 ~~~~~~~~~~~~~~~~i~~~~~--~~~----~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~---------- 315 (394)
......+...+.++.+ .+. .+++++.||.|++||++.... ...+..+..|..
T Consensus 205 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 272 (368)
T 3mmy_A 205 ------RRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP------AKDNFTFKCHRSNGTNTSAPQD 272 (368)
T ss_dssp ------EECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH------HHHSEEEECSEEC----CCCEE
T ss_pred ------hhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc------cccceeeeeeeccccccccccc
Confidence 1111122233344433 333 499999999999999987631 113444455544
Q ss_pred --CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 316 --DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 316 --~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
.|++++|+|++ .+|++++.||.|++||+.++ ..+..+. +|..+|++++|+|++++|++++.|+..+.|+
T Consensus 273 ~~~v~~~~~sp~~--~~l~s~~~dg~i~iwd~~~~--~~~~~~~--~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 273 IYAVNGIAFHPVH--GTLATVGSDGRFSFWDKDAR--TKLKTSE--QLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp ECCEEEEEECTTT--CCEEEEETTSCEEEEETTTT--EEEEECC--CCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred ccceEEEEEecCC--CEEEEEccCCeEEEEECCCC--cEEEEec--CCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 79999999999 68999999999999999987 4667777 8889999999999999999999987554444
No 69
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.1e-40 Score=280.49 Aligned_cols=252 Identities=17% Similarity=0.208 Sum_probs=204.3
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCe--eEEEEEecCCceeEEEEcCC-CCcEEEEceeeeEEeecc
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPL-KPSLVVSASKVIIISSLS 157 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~~i~~~~~~ 157 (394)
+|.+.|.+++|+ |+|+ +|++|+.|++|++||+.+++ .+..+.+|..+|.+++|+|. ++.+|++++.
T Consensus 11 ~H~~~V~~v~~s--~~g~-~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~-------- 79 (316)
T 3bg1_A 11 SHEDMIHDAQMD--YYGT-RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY-------- 79 (316)
T ss_dssp ---CCEEEEEEC--GGGC-EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET--------
T ss_pred cccCeEEEeeEc--CCCC-EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC--------
Confidence 689999999998 8999 99999999999999998764 56788999999999999863 4789999999
Q ss_pred ceeeeeeeccceeeeccCCcEEEEEecCCc--EEEEeeccCCCcccEEEEEecCCC--CeeEEeeccCCcEEEEEccccc
Q 016185 158 LICLLLFIRSNCLRVGQDESVRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 158 ~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
|++|++||+++++ ....+. +|...|.+++|+| + +.+|++|+.|+.|++||++...
T Consensus 80 -----------------D~~v~iWd~~~~~~~~~~~~~---~h~~~V~~v~~~p-~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 80 -----------------DRKVIIWREENGTWEKSHEHA---GHDSSVNSVCWAP-HDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp -----------------TSCEEEECCSSSCCCEEEEEC---CCSSCCCEEEECC-TTTCSCEEEECSSSCEEEEEECSSS
T ss_pred -----------------CCEEEEEECCCCcceEEEEcc---CCCCceEEEEECC-CCCCcEEEEEcCCCCEEEEecCCCC
Confidence 9999999998874 555565 7999999999999 5 7899999999999999998732
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeC-------------------cEEEEeecCCeEEEecCCC
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG-------------------DFILSKSVDNEIVLWEPKM 294 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------------------~~l~~~~~dg~i~~~d~~~ 294 (394)
. .........|...+.++.|++ ++|++++.|+.|++||++.
T Consensus 139 ~--------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~ 198 (316)
T 3bg1_A 139 Q--------------------WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198 (316)
T ss_dssp C--------------------EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT
T ss_pred C--------------------cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC
Confidence 1 011233456777788887763 5899999999999999975
Q ss_pred CCCCCCCCcceecccccCCCCCeEEEEEeecCC--cceEEEEeCCCcEEEEEecCCCc--eeeEEeccCCccCCeeEEEe
Q 016185 295 KEQSPGEGTADILQKYPVPECDIWFIKFSCDFH--YNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAM 370 (394)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~ 370 (394)
.. ....+..+..|...|.+++|+|++. ..+|++++.|++|++|++.+... .....+. .|...|.+++|
T Consensus 199 ~~------~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~ 270 (316)
T 3bg1_A 199 DG------QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSW 270 (316)
T ss_dssp TS------CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEE
T ss_pred CC------ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEE
Confidence 42 1124567888999999999999862 25899999999999999986311 1122333 66789999999
Q ss_pred ccCCCEEEEeccCCeEEEEEcC
Q 016185 371 SYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 371 s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
+|++++||+++.||.|++|+..
T Consensus 271 sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 271 SITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCCEEEEEcCCCeEEEEEEC
Confidence 9999999999999999999975
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=289.26 Aligned_cols=289 Identities=15% Similarity=0.236 Sum_probs=221.0
Q ss_pred CccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc-----------eeEEeeecccCCcc------------cceE
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG-----------VIAALQSYVDEDKE------------ESFY 87 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~-----------~~~~~~~~~~~~~~------------~~v~ 87 (394)
|.+.|++++|+| +|++||+|+.|+ |+|||+.+++ ....++ .|. ..|.
T Consensus 27 ~~~~V~~v~~s~----~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~~~~~~~~~~~~~V~ 97 (447)
T 3dw8_B 27 EADIISTVEFNH----SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-----SHEPEFDYLKSLEIEEKIN 97 (447)
T ss_dssp GGGSEEEEEECS----SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-----CCCCEEEGGGTEEECCCCC
T ss_pred ccCcEEEEEECC----CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-----cccccccccccccccCceE
Confidence 678999999999 799999999998 9999998776 355555 465 7899
Q ss_pred EEEEEEcCCC--CcEEEEeecCCeEEEEECCCCeeE---------------------------------------EEE-E
Q 016185 88 TVSWACNVDG--IPFLVAGGINGIIRVIDVSNEKLH---------------------------------------KSF-V 125 (394)
Q Consensus 88 ~~~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~---------------------------------------~~~-~ 125 (394)
+++|+ |++ . +|++++.|+.|++||+.+++.. +.+ .
T Consensus 98 ~l~~~--~~~~~~-~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 98 KIRWL--PQKNAA-QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp EEEEC--CCCSSS-EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred EEEEc--CCCCcc-eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 99998 776 6 8999999999999998764432 122 4
Q ss_pred ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC-CcEEEEee----ccCCCcc
Q 016185 126 GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT-GICILIFA----GAGGHRN 200 (394)
Q Consensus 126 ~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~~~~----~~~~~~~ 200 (394)
+|...|.+++|+| ++.+|+++ . |+.|++||+++ ++....+. ...+|..
T Consensus 175 ~h~~~v~~~~~~~-~~~~l~s~-~-------------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 227 (447)
T 3dw8_B 175 AHTYHINSISINS-DYETYLSA-D-------------------------DLRINLWHLEITDRSFNIVDIKPANMEELTE 227 (447)
T ss_dssp CCSSCCCEEEECT-TSSEEEEE-C-------------------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCC
T ss_pred CCCcceEEEEEcC-CCCEEEEe-C-------------------------CCeEEEEECCCCCceeeeeecccccccccCc
Confidence 7999999999999 78899998 7 99999999984 44444321 1236899
Q ss_pred cEEEEEecCCCC-eeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCC------------c
Q 016185 201 EVLSVDFHPSDI-YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN------------Y 267 (394)
Q Consensus 201 ~i~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 267 (394)
.|.+++|+| ++ .+|++|+.||.|++||+++.+.. ...+..+..|.. .
T Consensus 228 ~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (447)
T 3dw8_B 228 VITAAEFHP-NSCNTFVYSSSKGTIRLCDMRASALC-------------------DRHSKLFEEPEDPSNRSFFSEIISS 287 (447)
T ss_dssp CEEEEEECS-SCTTEEEEEETTSCEEEEETTTCSSS-------------------CTTCEEECCC-----CCHHHHHTTC
T ss_pred ceEEEEECC-CCCcEEEEEeCCCeEEEEECcCCccc-------------------cceeeEeccCCCccccccccccCce
Confidence 999999999 76 89999999999999999984320 011344455554 8
Q ss_pred eEEEEEe--CcEEEEeecCCeEEEecCCC-CCCCCCCCcceecccccCCCC---------------CeEEEEEeecCCcc
Q 016185 268 VDCNRWL--GDFILSKSVDNEIVLWEPKM-KEQSPGEGTADILQKYPVPEC---------------DIWFIKFSCDFHYN 329 (394)
Q Consensus 268 i~~~~~~--~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~---------------~i~~~~~~~~~~~~ 329 (394)
|.+++|+ +++|++++. +.|++||+++ ++ .+..+..|.. .+..++|+|++ .
T Consensus 288 v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~--~ 355 (447)
T 3dw8_B 288 ISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR---------PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSD--S 355 (447)
T ss_dssp EEEEEECTTSSEEEEEES-SEEEEEETTCCSS---------CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTS--S
T ss_pred EEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc---------ccceeeccccccccccccccccccccceEEEECCCC--C
Confidence 9999998 779999988 9999999987 43 3444444432 13348999999 6
Q ss_pred eEEEEeCCCcEEEEEecCCCceeeEEe----------------------------ccCCccCCeeEEEeccCCCEEEEec
Q 016185 330 AAAIGNREGKIFVWELQSSPPVLIARL----------------------------SHAQSKSPIRQTAMSYDGSTILSCC 381 (394)
Q Consensus 330 ~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------------~~~~~~~~v~~~~~s~~~~~l~s~~ 381 (394)
+|++|+.||.|++||+.+++...+... ....+...|..++|+|++++||+++
T Consensus 356 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~ 435 (447)
T 3dw8_B 356 VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVAT 435 (447)
T ss_dssp EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEEC
T ss_pred EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEe
Confidence 899999999999999998753211100 0113446789999999999999998
Q ss_pred cCCeEEEEEcC
Q 016185 382 EDGAIWRWDAI 392 (394)
Q Consensus 382 ~dg~i~iwd~~ 392 (394)
.++ +++|.-+
T Consensus 436 ~~~-~~~~~~~ 445 (447)
T 3dw8_B 436 TNN-LYIFQDK 445 (447)
T ss_dssp SSC-EEEEECC
T ss_pred cce-eeeeccc
Confidence 775 8888754
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-38 Score=271.36 Aligned_cols=267 Identities=20% Similarity=0.323 Sum_probs=227.3
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
..++|+.++...+... ...+....+.+|...|.+++|+| ++++|++++.|+ |++||+.+++.+..+. .
T Consensus 37 ~l~s~~~dg~i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~ 105 (312)
T 4ery_A 37 WLASSSADKLIKIWGA--YDGKFEKTISGHKLGISDVAWSS----DSNLLVSASDDKTLKIWDVSSGKCLKTLK-----G 105 (312)
T ss_dssp EEEEEETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECT----TSSEEEEEETTSEEEEEETTTCCEEEEEE-----C
T ss_pred EEEEeeCCCeEEEEeC--CCcccchhhccCCCceEEEEEcC----CCCEEEEECCCCEEEEEECCCCcEEEEEc-----C
Confidence 3566777777666543 33455667889999999999999 789999999998 9999999999888887 6
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
|...|.+++|. |+++ +|++|+.||.|++||+.+++.+..+..|..+|.+++|+| ++.+|++++.
T Consensus 106 ~~~~v~~~~~~--~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~------------ 169 (312)
T 4ery_A 106 HSNYVFCCNFN--PQSN-LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSY------------ 169 (312)
T ss_dssp CSSCEEEEEEC--SSSS-EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEET------------
T ss_pred CCCCEEEEEEc--CCCC-EEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CCCEEEEEeC------------
Confidence 78889999888 8998 999999999999999999999999999999999999999 7889999999
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccc
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 241 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 241 (394)
|+.|++||+++++.+..+.. .+...+..++|+| ++.+|++++.|+.|++||+++++
T Consensus 170 -------------d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~-------- 225 (312)
T 4ery_A 170 -------------DGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGK-------- 225 (312)
T ss_dssp -------------TSCEEEEETTTCCEEEEECC--SSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTE--------
T ss_pred -------------CCcEEEEECCCCceeeEEec--cCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCc--------
Confidence 99999999999988877652 4677899999999 99999999999999999999833
Q ss_pred cCCCCCCCCccccccceeeeecCCCceEEE--EEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCC
Q 016185 242 WTDLPSKFPTKYVQFPVFIASVHSNYVDCN--RWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECD 316 (394)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (394)
.+..+..|.....++ .+. +.++++++.||.|++||+++++ .+..+..|...
T Consensus 226 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~---------~~~~~~~h~~~ 281 (312)
T 4ery_A 226 ---------------CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---------IVQKLQGHTDV 281 (312)
T ss_dssp ---------------EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC---------EEEEECCCSSC
T ss_pred ---------------EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch---------hhhhhhccCCc
Confidence 355555665543322 222 7799999999999999999876 67888899999
Q ss_pred eEEEEEeecCCcceEEEEe--CCCcEEEEEec
Q 016185 317 IWFIKFSCDFHYNAAAIGN--REGKIFVWELQ 346 (394)
Q Consensus 317 i~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~ 346 (394)
|.+++|+|++ .++++++ .|+.|++|+.+
T Consensus 282 v~~~~~~p~~--~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 282 VISTACHPTE--NIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECSSS--SEEEEEECTTTCCEEEEECC
T ss_pred EEEEeecCcC--CceEEEEccCCccEEEecCC
Confidence 9999999999 6888886 69999999864
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-38 Score=278.58 Aligned_cols=255 Identities=21% Similarity=0.336 Sum_probs=212.2
Q ss_pred ceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEE
Q 016185 35 PLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVI 113 (394)
Q Consensus 35 ~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vw 113 (394)
.|++++|+| ++++||+++.|+ |+|||+.+++.+..+. .|...|.+++|+ |+++ +|++++.|+.|++|
T Consensus 125 ~v~~v~~s~----dg~~l~s~~~d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~--p~~~-~l~s~s~d~~v~iw 192 (393)
T 1erj_A 125 YIRSVCFSP----DGKFLATGAEDRLIRIWDIENRKIVMILQ-----GHEQDIYSLDYF--PSGD-KLVSGSGDRTVRIW 192 (393)
T ss_dssp BEEEEEECT----TSSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEEC--TTSS-EEEEEETTSEEEEE
T ss_pred eEEEEEECC----CCCEEEEEcCCCeEEEEECCCCcEEEEEc-----cCCCCEEEEEEc--CCCC-EEEEecCCCcEEEE
Confidence 499999999 799999999998 9999999998887777 688899999988 9998 99999999999999
Q ss_pred ECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEee
Q 016185 114 DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFA 193 (394)
Q Consensus 114 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~ 193 (394)
|+.++++...+. +...+.+++|+|.++.+|++++. |+.|++||+++++.+..+.
T Consensus 193 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~-------------------------d~~v~iwd~~~~~~~~~~~ 246 (393)
T 1erj_A 193 DLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSL-------------------------DRAVRVWDSETGFLVERLD 246 (393)
T ss_dssp ETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEET-------------------------TSCEEEEETTTCCEEEEEC
T ss_pred ECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcC-------------------------CCcEEEEECCCCcEEEeec
Confidence 999998888776 56789999999977899999999 9999999999998877763
Q ss_pred c----cCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceE
Q 016185 194 G----AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 269 (394)
Q Consensus 194 ~----~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 269 (394)
. ..+|...|.+++|+| ++.+|++|+.|+.|++||+++....... ...........+.+|...|.
T Consensus 247 ~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~~-----------~~~~~~~~~~~~~~h~~~v~ 314 (393)
T 1erj_A 247 SENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDS-----------KTPNSGTCEVTYIGHKDFVL 314 (393)
T ss_dssp ------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC--------------------------CEEEEEECCSSCEE
T ss_pred ccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcccc-----------cCCCCCcceEEEecccCcEE
Confidence 1 126899999999999 9999999999999999999874321100 00011233556788999999
Q ss_pred EEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecC----CcceEEEEeCCCcEEEE
Q 016185 270 CNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDF----HYNAAAIGNREGKIFVW 343 (394)
Q Consensus 270 ~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~l~~~~~dg~i~iw 343 (394)
+++|+ +.++++++.|+.|++||+++++ .+..+.+|...|.+++|+++. ...+|++|+.||.|++|
T Consensus 315 ~~~~~~~~~~l~sgs~D~~v~iwd~~~~~---------~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW 385 (393)
T 1erj_A 315 SVATTQNDEYILSGSKDRGVLFWDKKSGN---------PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIW 385 (393)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTCC---------EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEECCCCe---------EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEEC
Confidence 99997 7899999999999999999876 567788999999999998742 12689999999999999
Q ss_pred EecCC
Q 016185 344 ELQSS 348 (394)
Q Consensus 344 d~~~~ 348 (394)
++...
T Consensus 386 ~~~~~ 390 (393)
T 1erj_A 386 KYKKI 390 (393)
T ss_dssp EEEEC
T ss_pred ccccc
Confidence 98765
No 73
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.4e-38 Score=274.53 Aligned_cols=282 Identities=11% Similarity=0.071 Sum_probs=228.8
Q ss_pred eeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCce---eEEeeecccCCcccceEEEEEEEcCCCCcEE
Q 016185 26 TNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGV---IAALQSYVDEDKEESFYTVSWACNVDGIPFL 101 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 101 (394)
.....+|.+.|++++|+| ++++|++++.|+ |++|++.+++. ...+. .|...|.+++|+ |+++.+|
T Consensus 4 ~~~~~~h~~~v~~~~~s~----~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~--~~~~~~l 72 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIP----SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-----RYKHPLLCCNFI--DNTDLQI 72 (342)
T ss_dssp EECSSCCSSCEEEEEEEG----GGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-----ECSSCEEEEEEE--ESSSEEE
T ss_pred eecccCCCCcEEEEEEcC----CCCEEEEEcCCCeEEEEEeCCCCccccceeee-----ecCCceEEEEEC--CCCCcEE
Confidence 334568999999999999 789999999988 99999988772 22222 578899999998 7764378
Q ss_pred EEeecCCeEEEEEC-CCCeeEEEEEe--cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcE
Q 016185 102 VAGGINGIIRVIDV-SNEKLHKSFVG--HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESV 178 (394)
Q Consensus 102 ~s~~~dg~i~vwd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i 178 (394)
++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| +.++++++. |+.|
T Consensus 73 ~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~-------------------------d~~i 124 (342)
T 1yfq_A 73 YVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG--DDKLIAASW-------------------------DGLI 124 (342)
T ss_dssp EEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEET-------------------------TSEE
T ss_pred EEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcC-------------------------CCeE
Confidence 99999999999999 77654 77778 999999999999 688999998 9999
Q ss_pred EEEEecC---------CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccc-cceeeccccccCCCCCC
Q 016185 179 RLWNVQT---------GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE-FWTYVEKSFTWTDLPSK 248 (394)
Q Consensus 179 ~vwd~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~ 248 (394)
++||+++ ++.+..+. |...|.+++|+| ++ +++++.|+.|++||+++ ...
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~-------------- 183 (342)
T 1yfq_A 125 EVIDPRNYGDGVIAVKNLNSNNTK----VKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDD-------------- 183 (342)
T ss_dssp EEECHHHHTTBCEEEEESCSSSSS----SCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTC--------------
T ss_pred EEEcccccccccccccCCeeeEEe----eCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccc--------------
Confidence 9999987 65555543 889999999998 65 99999999999999987 431
Q ss_pred CCccccccceeeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC---------CCC
Q 016185 249 FPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP---------ECD 316 (394)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~---------~~~ 316 (394)
........|...+.+++|+ ++++++++.||.|++|+++...... .......+..| ...
T Consensus 184 -------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 184 -------NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDY---NSSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp -------CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCST---TCTTCEEEECCCCCTTCCSSCCC
T ss_pred -------cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccc---ccccceeeeccccccccccccee
Confidence 1233445678889999996 4799999999999999998761000 00133444444 348
Q ss_pred eEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCc-cCCeeEEEeccCCCEEEEeccCCe
Q 016185 317 IWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQS-KSPIRQTAMSYDGSTILSCCEDGA 385 (394)
Q Consensus 317 i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~dg~ 385 (394)
|.+++|+|++ .+|++++.||.|++||+.++ ..+..+. +| ..+|++++ |++++|++++.||.
T Consensus 254 i~~~~~s~~~--~~l~~~~~dg~i~vwd~~~~--~~~~~~~--~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 254 VNSIEFSPRH--KFLYTAGSDGIISCWNLQTR--KKIKNFA--KFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEEEEECTTT--CCEEEEETTSCEEEEETTTT--EEEEECC--CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred EEEEEEcCCC--CEEEEecCCceEEEEcCccH--hHhhhhh--cccCCCceEec--CCCCeEEEEecCCc
Confidence 9999999999 68999999999999999987 4566666 77 89999999 99999999999998
No 74
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.3e-38 Score=271.75 Aligned_cols=277 Identities=13% Similarity=0.166 Sum_probs=216.4
Q ss_pred eeeecCCCceeeeecccccc-----cceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeee
Q 016185 3 RTAIGCEPLVGSLTPSKKRE-----YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQS 76 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~-----~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~ 76 (394)
..++|..+..+.+....... ..+...+.+|...|++++|+| ++.++++++.|+ |++||+.+++.+..+.
T Consensus 41 ~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~----~~~~l~s~s~D~~v~lwd~~~~~~~~~~~- 115 (343)
T 2xzm_R 41 VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ----ENCFAISSSWDKTLRLWDLRTGTTYKRFV- 115 (343)
T ss_dssp EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS----STTEEEEEETTSEEEEEETTSSCEEEEEE-
T ss_pred EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC----CCCEEEEEcCCCcEEEEECCCCcEEEEEc-
Confidence 35677777777776543321 235567899999999999999 789999999998 9999999999888887
Q ss_pred cccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEE---ecCCceeEEEEcCCC---------CcEE
Q 016185 77 YVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV---GHGDSINEIRTQPLK---------PSLV 144 (394)
Q Consensus 77 ~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---~~~~~v~~~~~~~~~---------~~~l 144 (394)
.|...|.+++|+ |+++ +|++++.|+.|++||+.. ....... .|...|.+++|+|+. ..+|
T Consensus 116 ----~h~~~v~~v~~s--p~~~-~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l 187 (343)
T 2xzm_R 116 ----GHQSEVYSVAFS--PDNR-QILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYF 187 (343)
T ss_dssp ----CCCSCEEEEEEC--SSTT-EEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEE
T ss_pred ----CCCCcEEEEEEC--CCCC-EEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEE
Confidence 688899999988 9999 999999999999999874 3333333 688899999999943 1678
Q ss_pred EEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcE
Q 016185 145 VSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTV 224 (394)
Q Consensus 145 ~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v 224 (394)
++++. |+.|++|| ..++....+. +|...|.+++|+| ++++|++|+.||.|
T Consensus 188 ~s~~~-------------------------d~~i~iwd-~~~~~~~~~~---~h~~~v~~~~~s~-~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 188 ASVGW-------------------------DGRLKVWN-TNFQIRYTFK---AHESNVNHLSISP-NGKYIATGGKDKKL 237 (343)
T ss_dssp EEEET-------------------------TSEEEEEE-TTTEEEEEEE---CCSSCEEEEEECT-TSSEEEEEETTCEE
T ss_pred EEEcC-------------------------CCEEEEEc-CCCceeEEEc---CccccceEEEECC-CCCEEEEEcCCCeE
Confidence 88888 99999999 4566666777 7999999999999 99999999999999
Q ss_pred EEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCC--C
Q 016185 225 KIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSP--G 300 (394)
Q Consensus 225 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~--~ 300 (394)
++||+.... .+...+ .+...|.+++|+ +.++ +++.|+.|++||+.+.+... .
T Consensus 238 ~iwd~~~~~----------------------~~~~~~-~~~~~v~~v~~sp~~~~l-a~~~d~~v~iw~~~~~~~~~~~~ 293 (343)
T 2xzm_R 238 LIWDILNLT----------------------YPQREF-DAGSTINQIAFNPKLQWV-AVGTDQGVKIFNLMTQSKAPVCT 293 (343)
T ss_dssp EEEESSCCS----------------------SCSEEE-ECSSCEEEEEECSSSCEE-EEEESSCEEEEESSSCCSCSEEE
T ss_pred EEEECCCCc----------------------ccceee-cCCCcEEEEEECCCCCEE-EEECCCCEEEEEeCCCCCCceEE
Confidence 999996521 112222 245569999998 4454 56678899999998765321 0
Q ss_pred C--CcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 301 E--GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 301 ~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
. ...........|...+.+++|+|++ .+|++|+.||.|++|++.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~v~~~~~sp~g--~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 294 IEAEPITKAEGQKGKNPQCTSLAWNALG--KKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp CCCCSGGGBTTBCCSCCCEEEEEECSSS--CCEEEEETTSEEEEEEEEEE
T ss_pred eecCcchhhhhhcCCCCceEEEEECCCC--CeEEEecCCceEEEEEEEcc
Confidence 0 0000111233677889999999999 68999999999999998764
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-38 Score=275.85 Aligned_cols=252 Identities=17% Similarity=0.209 Sum_probs=215.9
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECC--CCeeEEEEEecCCceeEEEEcCC-CCcEEEEceeeeEEeecc
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS--NEKLHKSFVGHGDSINEIRTQPL-KPSLVVSASKVIIISSLS 157 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~~i~~~~~~ 157 (394)
+|...|.+++|+ |+++ +|++|+.||.|++||+. +.+.+..+.+|...|.+++|+++ ++.+|++++.
T Consensus 9 ~h~~~v~~~~~s--~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-------- 77 (379)
T 3jrp_A 9 AHNELIHDAVLD--YYGK-RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------- 77 (379)
T ss_dssp ECCCCEEEEEEC--SSSS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET--------
T ss_pred CCcccEEEEEEc--CCCC-EEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc--------
Confidence 688999999998 9999 99999999999999998 56778888999999999999873 2789999999
Q ss_pred ceeeeeeeccceeeeccCCcEEEEEecCCc--EEEEeeccCCCcccEEEEEecCCC--CeeEEeeccCCcEEEEEccccc
Q 016185 158 LICLLLFIRSNCLRVGQDESVRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 158 ~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
||.|++||+++++ ....+. .|...|.+++|+| + +.+|++++.|+.|++||++...
T Consensus 78 -----------------dg~v~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 78 -----------------DGKVLIWKEENGRWSQIAVHA---VHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp -----------------TSCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTS
T ss_pred -----------------CCEEEEEEcCCCceeEeeeec---CCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCC
Confidence 9999999999987 556665 7999999999999 7 8899999999999999998842
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe---------------CcEEEEeecCCeEEEecCCCCCCC
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---------------GDFILSKSVDNEIVLWEPKMKEQS 298 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------------~~~l~~~~~dg~i~~~d~~~~~~~ 298 (394)
......+..|...|.+++|+ +.++++++.|+.|++||+++...
T Consensus 137 ---------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~- 194 (379)
T 3jrp_A 137 ---------------------TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ- 194 (379)
T ss_dssp ---------------------CCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT-
T ss_pred ---------------------ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc-
Confidence 12344667899999999997 46899999999999999987642
Q ss_pred CCCCcceecccccCCCCCeEEEEEeec---CCcceEEEEeCCCcEEEEEecCCCceeeEE-eccCCccCCeeEEEeccCC
Q 016185 299 PGEGTADILQKYPVPECDIWFIKFSCD---FHYNAAAIGNREGKIFVWELQSSPPVLIAR-LSHAQSKSPIRQTAMSYDG 374 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~ 374 (394)
.......+..|...|.+++|+|+ + .+|++++.||.|++||+..+....... +....|...|++++|+|++
T Consensus 195 ----~~~~~~~~~~h~~~v~~~~~sp~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 268 (379)
T 3jrp_A 195 ----TYVLESTLEGHSDWVRDVAWSPTVLLR--SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG 268 (379)
T ss_dssp ----EEEEEEEECCCSSCEEEEEECCCCSSS--EEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS
T ss_pred ----ceeeEEEEecccCcEeEEEECCCCCCC--CeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC
Confidence 22345677889999999999999 6 799999999999999999875332322 3344688999999999999
Q ss_pred CEEEEeccCCeEEEEEcC
Q 016185 375 STILSCCEDGAIWRWDAI 392 (394)
Q Consensus 375 ~~l~s~~~dg~i~iwd~~ 392 (394)
++|++++.||.|++|++.
T Consensus 269 ~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 269 NVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp CCEEEEESSSSEEEEEEE
T ss_pred CEEEEecCCCcEEEEeCC
Confidence 999999999999999986
No 76
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.9e-38 Score=273.69 Aligned_cols=295 Identities=13% Similarity=0.185 Sum_probs=215.9
Q ss_pred eeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc----eeEEeeecccCCcccceEEEEEEEcCCCCcE
Q 016185 26 TNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG----VIAALQSYVDEDKEESFYTVSWACNVDGIPF 100 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 100 (394)
...+.+|.+.|++++|+| ++++||+++.|+ |++||+.++. ....+. .|...|.+++|++..+++ +
T Consensus 4 ~~~~~gH~~~v~~~~~~~----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~d~~-~ 73 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDF----YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-----AHDSSIVAIDWASPEYGR-I 73 (351)
T ss_dssp CCEECCCSSCEEEEEECS----SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-----CCSSCEEEEEECCGGGCS-E
T ss_pred cccCcccccceeEEEEcC----CCCEEEEeeCCCeEEEEECCCCCCcceecceec-----cCCCcEEEEEEcCCCCCC-E
Confidence 456789999999999999 789999999998 9999998764 333344 688999999998322687 9
Q ss_pred EEEeecCCeEEEEECCCC---------eeEEEEEecCCceeEEEEcCCC--CcEEEEceeeeEEeeccceeeeeeeccce
Q 016185 101 LVAGGINGIIRVIDVSNE---------KLHKSFVGHGDSINEIRTQPLK--PSLVVSASKVIIISSLSLICLLLFIRSNC 169 (394)
Q Consensus 101 l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~~i~~~~~~~~~~~~~~~~~~ 169 (394)
|++|+.||.|++||+.++ +.+..+..|...|.+++|+| + +.++++++.
T Consensus 74 l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~-------------------- 132 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGN-------------------- 132 (351)
T ss_dssp EEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEET--------------------
T ss_pred EEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecC--------------------
Confidence 999999999999999876 56788889999999999999 6 789999999
Q ss_pred eeeccCCcEEEEEecCCcEEEEeec----------cCCCcccEEEEEecCCC---CeeEEeeccCCcEEEEEccccceee
Q 016185 170 LRVGQDESVRLWNVQTGICILIFAG----------AGGHRNEVLSVDFHPSD---IYRIASCGMDNTVKIWSMKEFWTYV 236 (394)
Q Consensus 170 ~~~~~d~~i~vwd~~~~~~~~~~~~----------~~~~~~~i~~~~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~ 236 (394)
|+.|++||+++++.+..+.. ...|...+.+++|+| + +.++++++.|+.+.+|+....+
T Consensus 133 -----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~l~~~~~~~~~~~~~~~~~~--- 203 (351)
T 3f3f_A 133 -----DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCP-SRFSPEKLAVSALEQAIIYQRGKDGK--- 203 (351)
T ss_dssp -----TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECC-CSSSCCEEEEEETTEEEEEEECTTSC---
T ss_pred -----CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEecc-CCCCCcEEEEecCCCcEEEEccCCCc---
Confidence 99999999988764332210 125778999999999 5 8899999999999888776632
Q ss_pred ccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--C----cEEEEeecCCeEEEecCCCCCCCCCCCcceecccc
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--G----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY 310 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~----~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 310 (394)
...+..+..|...|.+++|+ + +++++++.||.|++||++..... ...
T Consensus 204 ------------------~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---------~~~ 256 (351)
T 3f3f_A 204 ------------------LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSP---------LAS 256 (351)
T ss_dssp ------------------EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------
T ss_pred ------------------eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCc---------ccc
Confidence 12356777899999999998 4 68999999999999999876421 111
Q ss_pred cCCCCCeEEEEEeecCCcceEEEEe----CCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeE
Q 016185 311 PVPECDIWFIKFSCDFHYNAAAIGN----REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 386 (394)
Q Consensus 311 ~~~~~~i~~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 386 (394)
..+.........++.. ..++.+. ....+.+|+.... ..+..+. +|...|++++|+|++++|++++.||.|
T Consensus 257 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~h~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 257 EESLTNSNMFDNSADV--DMDAQGRSDSNTEEKAELQSNLQV--ELLSEHD--DHNGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp ------------------------------------CCSEEE--EEEEEEC--TTSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred CCcccceeccCCCccc--ccccccccccccceeeeecccccc--cEEEEEe--cccccEEEEEEcCCCCEEEEecCCCcE
Confidence 1112222233333333 2333332 3334455544433 3555566 899999999999999999999999999
Q ss_pred EEEEcCC
Q 016185 387 WRWDAIP 393 (394)
Q Consensus 387 ~iwd~~~ 393 (394)
++||+.+
T Consensus 331 ~iw~~~~ 337 (351)
T 3f3f_A 331 RLWKATY 337 (351)
T ss_dssp EEEEECT
T ss_pred EEEecCc
Confidence 9999875
No 77
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.2e-38 Score=279.08 Aligned_cols=287 Identities=16% Similarity=0.227 Sum_probs=228.2
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCcee-EEeeecccCCcccceEEEEEEEcC-CCCcEEEEeecCCeE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVI-AALQSYVDEDKEESFYTVSWACNV-DGIPFLVAGGINGII 110 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~l~s~~~dg~i 110 (394)
.....++++| ....++++++.++ |+||++.+.... ..+.. ..+|...|.+++|+ | ++. +|++|+.||.|
T Consensus 35 ~~~~~~~~~~---~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~--~~~h~~~V~~~~~~--p~~~~-~l~s~s~dg~v 106 (402)
T 2aq5_A 35 WDSGFCAVNP---KFMALICEASGGGAFLVLPLGKTGRVDKNVPL--VCGHTAPVLDIAWC--PHNDN-VIASGSEDCTV 106 (402)
T ss_dssp CSSCSEEECS---SEEEEEBCCSSSCCEEEEETTCCEECCTTCCC--BCCCSSCEEEEEEC--TTCTT-EEEEEETTSEE
T ss_pred cCCCcEEECC---CeEEEEEEEcCCCEEEEEECccCCCCCCCCce--EecCCCCEEEEEeC--CCCCC-EEEEEeCCCeE
Confidence 3456688888 2344555677777 999998665332 11111 12689999999998 8 777 99999999999
Q ss_pred EEEECCCC-------eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEe
Q 016185 111 RVIDVSNE-------KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183 (394)
Q Consensus 111 ~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~ 183 (394)
++||+.++ +++..+.+|...|.+++|+|++..+|++++. |+.|++||+
T Consensus 107 ~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-------------------------dg~i~iwd~ 161 (402)
T 2aq5_A 107 MVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-------------------------DNVILVWDV 161 (402)
T ss_dssp EEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET-------------------------TSCEEEEET
T ss_pred EEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC-------------------------CCEEEEEEC
Confidence 99999987 6788899999999999999955579999999 999999999
Q ss_pred cCCcEEEEe--eccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeee
Q 016185 184 QTGICILIF--AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 261 (394)
Q Consensus 184 ~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (394)
++++.+..+ . .|...|.+++|+| ++.+|++++.||.|++||++++ ..+..+
T Consensus 162 ~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~-----------------------~~~~~~ 214 (402)
T 2aq5_A 162 GTGAAVLTLGPD---VHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKG-----------------------TVVAEK 214 (402)
T ss_dssp TTTEEEEEECTT---TCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTT-----------------------EEEEEE
T ss_pred CCCCccEEEecC---CCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCC-----------------------ceeeee
Confidence 999998888 5 7999999999999 9999999999999999999983 345555
Q ss_pred -ecCCCc-eEEEEEe--CcEEEEe---ecCCeEEEecCCCCCCCCCCCcceecccc-cCCCCCeEEEEEeecCCcceEE-
Q 016185 262 -SVHSNY-VDCNRWL--GDFILSK---SVDNEIVLWEPKMKEQSPGEGTADILQKY-PVPECDIWFIKFSCDFHYNAAA- 332 (394)
Q Consensus 262 -~~~~~~-i~~~~~~--~~~l~~~---~~dg~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~- 332 (394)
..|... +.++.|+ +.+++++ +.|+.|++||+++.+. .+... ..+...+.+++|+|+++ +++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~--------~~~~~~~~~~~~v~~~~~s~~~~--~l~~ 284 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE--------PLSLQELDTSSGVLLPFFDPDTN--IVYL 284 (402)
T ss_dssp ECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS--------CSEEEECCCCSSCEEEEEETTTT--EEEE
T ss_pred ccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC--------CceEEeccCCCceeEEEEcCCCC--EEEE
Confidence 677766 8889997 6788888 7899999999998653 11111 23566799999999994 564
Q ss_pred EEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 333 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+|+.||.|++||+.++++ .+..+....|..+|.+++|+|++.++++ .++.+++|++.+
T Consensus 285 ~g~~dg~i~i~d~~~~~~-~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 285 CGKGDSSIRYFEITSEAP-FLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp EETTCSCEEEEEECSSTT-CEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred EEcCCCeEEEEEecCCCc-ceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 666899999999998863 2333331135689999999999998875 566999999864
No 78
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.2e-36 Score=291.89 Aligned_cols=315 Identities=17% Similarity=0.190 Sum_probs=259.0
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
..++|..++.+.+.. ....+....+.+|..+|++++|+| ++++|++++.|+ |++||+.+++.+..+. .
T Consensus 27 ~la~~~~~g~v~iwd--~~~~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-----~ 95 (814)
T 3mkq_A 27 WVLTTLYSGRVEIWN--YETQVEVRSIQVTETPVRAGKFIA----RKNWIIVGSDDFRIRVFNYNTGEKVVDFE-----A 95 (814)
T ss_dssp EEEEEETTSEEEEEE--TTTTEEEEEEECCSSCEEEEEEEG----GGTEEEEEETTSEEEEEETTTCCEEEEEE-----C
T ss_pred EEEEEeCCCEEEEEE--CCCCceEEEEecCCCcEEEEEEeC----CCCEEEEEeCCCeEEEEECCCCcEEEEEe-----c
Confidence 356777776666654 344556778889999999999999 799999999998 9999999999888887 6
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC-eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE-KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
|...|.+++|+ |+++ +|++++.||.|++||+.++ .....+.+|...|.+++|+|.++..+++++.
T Consensus 96 ~~~~v~~~~~s--~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~----------- 161 (814)
T 3mkq_A 96 HPDYIRSIAVH--PTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL----------- 161 (814)
T ss_dssp CSSCEEEEEEC--SSSS-EEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET-----------
T ss_pred CCCCEEEEEEe--CCCC-EEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC-----------
Confidence 88899999998 9999 9999999999999999886 7778888999999999999966789999999
Q ss_pred eeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCC-CCeeEEeeccCCcEEEEEccccceeeccc
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS-DIYRIASCGMDNTVKIWSMKEFWTYVEKS 239 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 239 (394)
||.|++||+++++....+.. .+...+.+++|+|. ++.+|++++.||.|++||+++
T Consensus 162 --------------dg~v~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-------- 217 (814)
T 3mkq_A 162 --------------DRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-------- 217 (814)
T ss_dssp --------------TSEEEEEETTCSSCSEEEEC--CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT--------
T ss_pred --------------CCeEEEEECCCCcceeEEec--CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC--------
Confidence 99999999988887777662 34588999999972 567899999999999999988
Q ss_pred cccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCe
Q 016185 240 FTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 317 (394)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i 317 (394)
...+..+..|...|.+++|+ ++++++++.||.|++||+.+++ .+..+..+...+
T Consensus 218 ---------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---------~~~~~~~~~~~v 273 (814)
T 3mkq_A 218 ---------------KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---------VEKTLNVGLERS 273 (814)
T ss_dssp ---------------TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS---------EEEEECCSSSSE
T ss_pred ---------------CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------EEEEeecCCCcE
Confidence 34567788899999999998 7799999999999999999776 567778888899
Q ss_pred EEEEEeecCCcceEEEEeCCCcEEEEEecCCCcee--------eEE-------------------------------ecc
Q 016185 318 WFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVL--------IAR-------------------------------LSH 358 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--------~~~-------------------------------~~~ 358 (394)
.+++|+|++. ..+++.+.++.+.+|++....+.. +.. ...
T Consensus 274 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (814)
T 3mkq_A 274 WCIATHPTGR-KNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKEL 352 (814)
T ss_dssp EEEEECTTCG-GGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEE
T ss_pred EEEEEccCCC-ceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecC
Confidence 9999999985 333444447778899876542111 100 000
Q ss_pred CCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 359 AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 359 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
..+...+.+++|+|+|++|++++ ||.+.+|++.
T Consensus 353 ~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 353 GSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp CCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred CCCccCCceeEECCCCCEEEEec-CCEEEEEECc
Confidence 13455688999999999999988 8999999975
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-36 Score=269.73 Aligned_cols=281 Identities=16% Similarity=0.113 Sum_probs=228.8
Q ss_pred eeeecCCCceeeeecccccc----cceeeeeccCccceeEEEEEeeCCCc----c---eEEEEecCCc-EEEEEcCCCce
Q 016185 3 RTAIGCEPLVGSLTPSKKRE----YRVTNKLQEGKRPLYAVVFNFIDSRY----F---NVFATVGGNR-VTVYQCLEGGV 70 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~----~~~~~~~~~h~~~v~~i~~sp~~~~~----~---~~las~~~d~-i~vw~~~~~~~ 70 (394)
..++|..++.+.+....... +.+...+.+|..+|++++|+| + + ++|++++.|+ |++|++.+++.
T Consensus 28 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~ 103 (397)
T 1sq9_A 28 FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ----AIERDAFELCLVATTSFSGDLLFYRITREDE 103 (397)
T ss_dssp EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE----EEETTTEEEEEEEEEETTSCEEEEEEEECTT
T ss_pred eEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec----ccccCCccccEEEEEcCCCCEEEEEccCCcc
Confidence 45677788887777665544 557778889999999999999 6 8 9999999988 99999998876
Q ss_pred -----eEEeeecccCCcccceEEEEEEEc--CCCCcE-EEEeecCCeEEEEECCC------CeeEE-----EEEe-----
Q 016185 71 -----IAALQSYVDEDKEESFYTVSWACN--VDGIPF-LVAGGINGIIRVIDVSN------EKLHK-----SFVG----- 126 (394)
Q Consensus 71 -----~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~-l~s~~~dg~i~vwd~~~------~~~~~-----~~~~----- 126 (394)
+..+..+........|.+++|+.. |+++ + |++++.||.|++||+.+ ++.+. .+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (397)
T 1sq9_A 104 TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 182 (397)
T ss_dssp TCCEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCS
T ss_pred cccccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccc
Confidence 666663210000588999988744 6787 8 99999999999999988 66666 7754
Q ss_pred --cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCC---ccc
Q 016185 127 --HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGH---RNE 201 (394)
Q Consensus 127 --~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~---~~~ 201 (394)
|...|.+++|+| ++ ++++++. |+.|++||+++++.+..+....+| ...
T Consensus 183 ~~~~~~i~~~~~~~-~~-~l~~~~~-------------------------dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 183 MTPSQFATSVDISE-RG-LIATGFN-------------------------NGTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp SSSCCCCCEEEECT-TS-EEEEECT-------------------------TSEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred cCCCCCceEEEECC-Cc-eEEEEeC-------------------------CCcEEEEECCCCceeEEEeccccccccCCc
Confidence 888999999999 66 9999999 999999999999999988811118 999
Q ss_pred EEEEEecCCCCeeEEeeccC---CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeec-------------CC
Q 016185 202 VLSVDFHPSDIYRIASCGMD---NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV-------------HS 265 (394)
Q Consensus 202 i~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 265 (394)
|.+++|+| ++.+|++++.| |.|++||+++. .++..+.. |.
T Consensus 236 i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 236 IRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFG-----------------------ERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp EEEEEECS-STTEEEEEEEETTEEEEEEEETTTC-----------------------CEEEEECBC--------CCBSBS
T ss_pred cceEEECC-CCCEEEEEecCCCCceEEEEECCCC-----------------------cccceeccCcccccccccccccC
Confidence 99999999 89999999999 99999999983 34555555 89
Q ss_pred CceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccccc------CC---------------CCCeEEEEE
Q 016185 266 NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP------VP---------------ECDIWFIKF 322 (394)
Q Consensus 266 ~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~------~~---------------~~~i~~~~~ 322 (394)
..|.+++|+ +++|++++.||.|++||+++++ .+..+. .| ...|++++|
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~ 362 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE---------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKF 362 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc---------eeEEEecccCcccchhhhhccccccccccCCceeEEEe
Confidence 999999998 8899999999999999998775 445555 55 889999999
Q ss_pred eecCC--------cceEEEEeCCCcEEEEEecCC
Q 016185 323 SCDFH--------YNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 323 ~~~~~--------~~~l~~~~~dg~i~iwd~~~~ 348 (394)
+|++. ..+|++++.||.|++|++.++
T Consensus 363 ~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 363 LKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp ECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 99972 138999999999999999876
No 80
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.8e-36 Score=263.44 Aligned_cols=298 Identities=10% Similarity=0.038 Sum_probs=216.0
Q ss_pred eeeeeccCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEe
Q 016185 25 VTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104 (394)
Q Consensus 25 ~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~ 104 (394)
+...+..|.+.|++++|+| +|++||+|+.++++||+..+++...... ...+..+++. ++++.+++++
T Consensus 11 ~~~~~~~h~~~V~~v~fs~----dg~~la~g~~~~~~iw~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~ 77 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQ----DQSCLILSTLKSFEIYNVHPVAHIMSQE-------MRHLSKVRML--HRTNYVAFVT 77 (355)
T ss_dssp --------CCCCCEEEECT----TSSEEEEECSSEEEEEEETTEEEEEEEE-------CSCCCEEEEC--TTSSEEEEEC
T ss_pred CccccccCCCceEEEEECC----CCCEEEEEcCCEEEEEecCCcceeeeee-------cCCeEEEEEc--CCCCEEEEEE
Confidence 3445688999999999999 7999999999999999988776544332 1246667776 6676345778
Q ss_pred ecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEec
Q 016185 105 GINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ 184 (394)
Q Consensus 105 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~ 184 (394)
+.|+.|++||+.+++++..+. |...|.+++|++ + .++.+. |+.|++||+.
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~-~--~~~~~~--------------------------~~~i~i~d~~ 127 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSR-E--FIVVSY--------------------------GDVISVFKFG 127 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECS-S--EEEEEE--------------------------TTEEEEEESS
T ss_pred CCccEEEEEECCCCcEEEEEE-CCCceEEEEEcC-C--EEEEEE--------------------------cCEEEEEECC
Confidence 889999999999999999887 667999999987 3 444444 8899999999
Q ss_pred CC-cEEEEeeccCCCcccEEEEEecCCCCeeEEe--eccCCcEEEEEccccceeeccccccCCCCCCCCccccccc-eee
Q 016185 185 TG-ICILIFAGAGGHRNEVLSVDFHPSDIYRIAS--CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP-VFI 260 (394)
Q Consensus 185 ~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 260 (394)
++ +.+..+. . +...+++++ .+++. |+.||.|++||+++......... ........| +..
T Consensus 128 ~~~~~~~~~~---~---~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~--------~~~~~~~~p~~~~ 190 (355)
T 3vu4_A 128 NPWKRITDDI---R---FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQ--------GVQQKAILGKGVL 190 (355)
T ss_dssp TTCCBSSCCE---E---EEEEEEEET---TEEEEEESSCTTCEEEEECCC--------------------------CCEE
T ss_pred CCceeeEEec---c---CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccc--------cccccccCcccEE
Confidence 88 6665554 2 444556665 34444 78999999999998431100000 000001123 677
Q ss_pred eecCCCceEEEEEe--CcEEEEeecCCe-EEEecCCCCCCCCCCCcceeccccc-C-CCCCeEEEEEeecCCcceEEEEe
Q 016185 261 ASVHSNYVDCNRWL--GDFILSKSVDNE-IVLWEPKMKEQSPGEGTADILQKYP-V-PECDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 261 ~~~~~~~i~~~~~~--~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~~l~~~~ 335 (394)
+.+|...|.+++|+ +++|++++.|++ |++||+++++ .+..+. + |...|.+++|+|++ .+|++++
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~---------~~~~~~~g~h~~~v~~~~~s~~~--~~l~s~s 259 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV---------LVREFRRGLDRADVVDMKWSTDG--SKLAVVS 259 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC---------EEEEEECTTCCSCEEEEEECTTS--CEEEEEE
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc---------EEEEEEcCCCCCcEEEEEECCCC--CEEEEEE
Confidence 88999999999998 789999999998 9999999876 566666 4 88999999999999 6999999
Q ss_pred CCCcEEEEEecCCCceeeEEec-------------------cCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 336 REGKIFVWELQSSPPVLIARLS-------------------HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~~~~~-------------------~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.|+.|++||+..........+. ...+......++|++++++|++++.||.+++|++.+
T Consensus 260 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 260 DKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp TTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred CCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 9999999999765322222211 011223346799999999999999999999999753
No 81
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-36 Score=270.59 Aligned_cols=295 Identities=14% Similarity=0.062 Sum_probs=226.5
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCc---eeEEeeeccc------------------------------
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGG---VIAALQSYVD------------------------------ 79 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~---~~~~~~~~~~------------------------------ 79 (394)
..++.+++|+| +|++|+++..+.|++||+.+|+ .+..+.....
T Consensus 4 ~~p~~~v~~s~----dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSR----DGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECS----SSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecC----CCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 35899999999 7888888877779999999998 5555542211
Q ss_pred -------------------CCcccceEEEEEEEcCCCCcE-EEEeecCCeEEEEECC--CCeeEEEEE--ecCCceeEEE
Q 016185 80 -------------------EDKEESFYTVSWACNVDGIPF-LVAGGINGIIRVIDVS--NEKLHKSFV--GHGDSINEIR 135 (394)
Q Consensus 80 -------------------~~~~~~v~~~~~~~~~~~~~~-l~s~~~dg~i~vwd~~--~~~~~~~~~--~~~~~v~~~~ 135 (394)
+.|...|.+++|+ |+++ + +++++.||.|++||+. +++.+..+. .|...|.+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~d~~-~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 156 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLT--SDES-RLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAIS 156 (450)
T ss_dssp --------------------CCCCCEEEEEEC--TTSS-EEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEE
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEc--CCCC-EEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEE
Confidence 1234468888888 9999 6 4899999999999999 888888886 5678999999
Q ss_pred EcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEE----EeeccCCCcccEEEEEecCCC
Q 016185 136 TQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICIL----IFAGAGGHRNEVLSVDFHPSD 211 (394)
Q Consensus 136 ~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~ 211 (394)
|+| ++.+|++++. +|.|++|++.+++... .+. +|...|.+++|+| +
T Consensus 157 ~sp-~~~~l~~~~~-------------------------~g~v~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~sp-~ 206 (450)
T 2vdu_B 157 IAE-DDTTVIIADK-------------------------FGDVYSIDINSIPEEKFTQEPIL---GHVSMLTDVHLIK-D 206 (450)
T ss_dssp ECT-TSSEEEEEET-------------------------TSEEEEEETTSCCCSSCCCCCSE---ECSSCEEEEEEEE-C
T ss_pred EcC-CCCEEEEEeC-------------------------CCcEEEEecCCcccccccceeee---cccCceEEEEEcC-C
Confidence 999 7789999998 9999999998876543 444 6999999999999 8
Q ss_pred ---CeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceee-eecCCCceEEEEEe-CcEEEEeecCCe
Q 016185 212 ---IYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI-ASVHSNYVDCNRWL-GDFILSKSVDNE 286 (394)
Q Consensus 212 ---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~-~~~l~~~~~dg~ 286 (394)
+.+|++++.|+.|++||++++ ..+.. ..+|...|.+++|+ +++|++++.|+.
T Consensus 207 ~~~~~~l~s~~~d~~i~vwd~~~~-----------------------~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~ 263 (450)
T 2vdu_B 207 SDGHQFIITSDRDEHIKISHYPQC-----------------------FIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDK 263 (450)
T ss_dssp TTSCEEEEEEETTSCEEEEEESCT-----------------------TCEEEECCCCSSCEEEEEECSTTEEEEEESSSE
T ss_pred CCCCcEEEEEcCCCcEEEEECCCC-----------------------ceeeeeecCCCCceEEEEECCCCEEEEEeCCCe
Confidence 899999999999999999883 23444 56899999999996 889999999999
Q ss_pred EEEecCCCCCCCCCCCcceecccc----------------cCCCCCeEEEEEeecCCcceEEEEe-CCCcEEEEEe--cC
Q 016185 287 IVLWEPKMKEQSPGEGTADILQKY----------------PVPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWEL--QS 347 (394)
Q Consensus 287 i~~~d~~~~~~~~~~~~~~~~~~~----------------~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~--~~ 347 (394)
|++||+++++..........+..+ ......+..++|+|++ .++++++ .|+.|++|++ ..
T Consensus 264 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~~~~d~~i~iw~~~~~~ 341 (450)
T 2vdu_B 264 IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL--PFVAFFVEATKCIIILEMSEKQ 341 (450)
T ss_dssp EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS--SEEEEEETTCSEEEEEEECSSS
T ss_pred EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC--CEEEEEECCCCeEEEEEeccCC
Confidence 999999987621100000000000 0234578999999998 5788887 8999999999 43
Q ss_pred C-CceeeEEeccCCccCCeeEEEeccCCCEEEEecc------CCeEEEEEcC
Q 016185 348 S-PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE------DGAIWRWDAI 392 (394)
Q Consensus 348 ~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~i~iwd~~ 392 (394)
+ ....+..+. .| ..|.+++|+|++.++++++. +..|.+|.+.
T Consensus 342 ~~~l~~~~~~~--~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 342 KGDLALKQIIT--FP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp TTCEEEEEEEE--CS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CCceeeccEec--cC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 3 224455565 55 78999999996544444443 5568888765
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.7e-36 Score=268.68 Aligned_cols=251 Identities=19% Similarity=0.304 Sum_probs=211.7
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC----------CeeEEEEEecCCceeEEEEcCCCCcEEEEceee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN----------EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKV 150 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~ 150 (394)
.|.+.|++++|+ |++..+|++++.||.|++||+.+ .+....+.+|...|.+++|+|++..+|++++.
T Consensus 126 ~h~~~v~~l~~~--p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~- 202 (430)
T 2xyi_A 126 NHEGEVNRARYM--PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD- 202 (430)
T ss_dssp EESSCCSEEEEE--TTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT-
T ss_pred cCCCcEEEEEEC--CCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC-
Confidence 588899999998 87433999999999999999976 57788899999999999999955449999999
Q ss_pred eEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc----E---EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCc
Q 016185 151 IIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI----C---ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 223 (394)
Q Consensus 151 i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~----~---~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~ 223 (394)
||.|++||+..+. . ...+. +|...|.+++|+|.++.+|++++.||.
T Consensus 203 ------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~s~~~dg~ 255 (430)
T 2xyi_A 203 ------------------------DHTICLWDINATPKEHRVIDAKNIFT---GHTAVVEDVAWHLLHESLFGSVADDQK 255 (430)
T ss_dssp ------------------------TSCEEEEETTSCCBGGGEEECSEEEC---CCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ------------------------CCeEEEEeCCCCCCCCceeccceeec---CCCCCEeeeEEeCCCCCEEEEEeCCCe
Confidence 9999999998732 2 23444 799999999999966788999999999
Q ss_pred EEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEeecCCeEEEecCCCCCCCCC
Q 016185 224 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPG 300 (394)
Q Consensus 224 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~dg~i~~~d~~~~~~~~~ 300 (394)
|++||+++... ..++..+..|...|.+++|+ ++ ++++++.||.|++||+++...
T Consensus 256 i~i~d~~~~~~--------------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--- 312 (430)
T 2xyi_A 256 LMIWDTRNNNT--------------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--- 312 (430)
T ss_dssp EEEEETTCSCS--------------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS---
T ss_pred EEEEECCCCCC--------------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC---
Confidence 99999998321 13456677899999999998 44 789999999999999997532
Q ss_pred CCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC------------ceeeEEeccCCccCCeeEE
Q 016185 301 EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP------------PVLIARLSHAQSKSPIRQT 368 (394)
Q Consensus 301 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------------~~~~~~~~~~~~~~~v~~~ 368 (394)
.+..+..|...|.+++|+|++. .+|++++.|+.|++||+.... +..+..+. +|...|+++
T Consensus 313 -----~~~~~~~h~~~v~~i~~sp~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~ 384 (430)
T 2xyi_A 313 -----KLHSFESHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG--GHTAKISDF 384 (430)
T ss_dssp -----CSEEEECCSSCEEEEEECSSCT-TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC--CCSSCEEEE
T ss_pred -----CeEEeecCCCCEEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcC--CCCCCceEE
Confidence 5667778899999999999986 479999999999999998732 13444444 888999999
Q ss_pred EeccCCC-EEEEeccCCeEEEEEcC
Q 016185 369 AMSYDGS-TILSCCEDGAIWRWDAI 392 (394)
Q Consensus 369 ~~s~~~~-~l~s~~~dg~i~iwd~~ 392 (394)
+|+|+++ +|++++.||.|+||++.
T Consensus 385 ~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 385 SWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EECCCCCCEEEEEECCCCEEEeEcc
Confidence 9999999 89999999999999986
No 83
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-36 Score=265.65 Aligned_cols=260 Identities=20% Similarity=0.301 Sum_probs=214.2
Q ss_pred eeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcC--CCceeEEeeecccCCcccceEEEEEEEcCCCCcEE
Q 016185 25 VTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCL--EGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFL 101 (394)
Q Consensus 25 ~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l 101 (394)
+...+++|.++|++++|+| ++++||+++.|+ |+|||+. +++.+..+. .|...|.+++|++..+++ +|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~-~l 72 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDY----YGKRLATCSSDKTIKIFEVEGETHKLIDTLT-----GHEGPVWRVDWAHPKFGT-IL 72 (379)
T ss_dssp --CCEEECCCCEEEEEECS----SSSEEEEEETTSCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCGGGCS-EE
T ss_pred ccEEecCCcccEEEEEEcC----CCCEEEEEECCCcEEEEecCCCcceeeeEec-----CCCCcEEEEEeCCCCCCC-EE
Confidence 4567889999999999999 789999999888 9999997 444555555 688999999998333387 99
Q ss_pred EEeecCCeEEEEECCCCe--eEEEEEecCCceeEEEEcCCC-CcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcE
Q 016185 102 VAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLK-PSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESV 178 (394)
Q Consensus 102 ~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i 178 (394)
++++.||.|++||+.+++ ....+..|...|.+++|+|++ +.+|++++. |+.|
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-------------------------d~~i 127 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-------------------------DGKV 127 (379)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------------------------TSEE
T ss_pred EEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC-------------------------CCcE
Confidence 999999999999999887 677788899999999999932 789999999 9999
Q ss_pred EEEEecCCc--EEEEeeccCCCcccEEEEEecCC------------CCeeEEeeccCCcEEEEEccccceeeccccccCC
Q 016185 179 RLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPS------------DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 179 ~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
++||++++. ....+. .|...|.+++|+|. ++.+|++++.||.|++||++.....
T Consensus 128 ~v~d~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------- 195 (379)
T 3jrp_A 128 SVVEFKENGTTSPIIID---AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--------- 195 (379)
T ss_dssp EEEECCTTSCCCEEEEE---CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE---------
T ss_pred EEEecCCCCceeeEEec---CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc---------
Confidence 999998873 334444 79999999999994 4889999999999999999873211
Q ss_pred CCCCCCccccccceeeeecCCCceEEEEEe-----CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEE
Q 016185 245 LPSKFPTKYVQFPVFIASVHSNYVDCNRWL-----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF 319 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 319 (394)
......+..|...|.+++|+ ++++++++.||.|++||+++.... ....+.....+...+++
T Consensus 196 ----------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~v~~ 261 (379)
T 3jrp_A 196 ----------YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP----WKKTLLKEEKFPDVLWR 261 (379)
T ss_dssp ----------EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC----CEEEESSSSCCSSCEEE
T ss_pred ----------eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc----ceeeeeccccCCCcEEE
Confidence 12345778899999999997 468999999999999999876421 11123344457789999
Q ss_pred EEEeecCCcceEEEEeCCCcEEEEEecC
Q 016185 320 IKFSCDFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 320 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
++|+|++ .+|++++.||.|++|++..
T Consensus 262 ~~~s~~g--~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 262 ASWSLSG--NVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEECSSS--CCEEEEESSSSEEEEEEEE
T ss_pred EEEcCCC--CEEEEecCCCcEEEEeCCC
Confidence 9999999 6899999999999999974
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.7e-35 Score=256.43 Aligned_cols=280 Identities=14% Similarity=0.155 Sum_probs=220.6
Q ss_pred eeeecCCCceeeeecccccc---cceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecc
Q 016185 3 RTAIGCEPLVGSLTPSKKRE---YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYV 78 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~---~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~ 78 (394)
..++|..+..+.+....... ..+.+.+++|...|++++|+| ++++|++++.|+ |++|+...........
T Consensus 53 ~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~----dg~~l~s~~~d~~i~~~~~~~~~~~~~~~--- 125 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS----DGQFALSGSWDGTLRLWDLTTGTTTRRFV--- 125 (340)
T ss_dssp EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT----TSSEEEEEETTSEEEEEETTTTEEEEEEE---
T ss_pred EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC----CCCEEEEEcccccceEEeecccceeeeec---
Confidence 35677778887776544322 335677899999999999999 799999999999 9999998887766665
Q ss_pred cCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCee-EEEEEecCCceeEEEEcCCC-CcEEEEceeeeEEeec
Q 016185 79 DEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL-HKSFVGHGDSINEIRTQPLK-PSLVVSASKVIIISSL 156 (394)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~~i~~~~~ 156 (394)
.+...+....+. +++. +|++++.|+.+++||+..... .....+|...+..++|+++. ..++++++.
T Consensus 126 --~~~~~~~~~~~~--~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~------- 193 (340)
T 4aow_A 126 --GHTKDVLSVAFS--SDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW------- 193 (340)
T ss_dssp --CCSSCEEEEEEC--TTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET-------
T ss_pred --CCCCceeEEEEe--ecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC-------
Confidence 455566666665 8888 999999999999999876543 33445789999999999844 356788888
Q ss_pred cceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceee
Q 016185 157 SLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYV 236 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 236 (394)
|+.|++||+++++....+. +|..+|++++|+| ++++|++|+.||.|++||+++.
T Consensus 194 ------------------d~~i~i~d~~~~~~~~~~~---~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~---- 247 (340)
T 4aow_A 194 ------------------DKLVKVWNLANCKLKTNHI---GHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEG---- 247 (340)
T ss_dssp ------------------TSCEEEEETTTTEEEEEEC---CCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTT----
T ss_pred ------------------CCEEEEEECCCCceeeEec---CCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccC----
Confidence 9999999999999998888 8999999999999 9999999999999999999983
Q ss_pred ccccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCC
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC 315 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
.++..+. +...+.++.|+ +..+++++.|+.|++||+++..................|..
T Consensus 248 -------------------~~~~~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~ 307 (340)
T 4aow_A 248 -------------------KHLYTLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP 307 (340)
T ss_dssp -------------------EEEEEEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCC
T ss_pred -------------------ceeeeec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCC
Confidence 3344444 44678999998 56788888999999999987642111111112233456788
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
.|++++|+|++ .+|++|+.||.|+|||+.++.
T Consensus 308 ~v~~l~~s~dg--~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 308 QCTSLAWSADG--QTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEECTTS--SEEEEEETTSCEEEEEEEC--
T ss_pred CEEEEEECCCC--CEEEEEeCCCEEEEEeCCCcC
Confidence 99999999999 689999999999999999874
No 85
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.8e-35 Score=259.47 Aligned_cols=256 Identities=12% Similarity=0.104 Sum_probs=214.4
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCe--eEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccc
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~ 158 (394)
.|.++|.+++|+ |+++ +|++++.|+.|++||+.+++ .+..+.+|...|.+++|+| ++.+|++++.
T Consensus 6 ~~~~~i~~~~~s--~~~~-~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~--------- 72 (372)
T 1k8k_C 6 FLVEPISCHAWN--KDRT-QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGT--------- 72 (372)
T ss_dssp SCSSCCCEEEEC--TTSS-EEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEET---------
T ss_pred ccCCCeEEEEEC--CCCC-EEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcC---------
Confidence 478899999998 9999 99999999999999999887 8889999999999999999 7899999999
Q ss_pred eeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecc
Q 016185 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 159 ~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 238 (394)
|+.|++||+++++....+.. ..|...|.+++|+| ++.+|++++.|+.|++||++.....
T Consensus 73 ----------------dg~i~vwd~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~--- 131 (372)
T 1k8k_C 73 ----------------DRNAYVWTLKGRTWKPTLVI-LRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDW--- 131 (372)
T ss_dssp ----------------TSCEEEEEEETTEEEEEEEC-CCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTE---
T ss_pred ----------------CCeEEEEECCCCeeeeeEEe-ecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcc---
Confidence 99999999998876555431 26899999999999 8999999999999999999883310
Q ss_pred ccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCC---------CCcceec
Q 016185 239 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPG---------EGTADIL 307 (394)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~---------~~~~~~~ 307 (394)
.........|...|.+++|+ ++++++++.||.|++||++....... ......+
T Consensus 132 ----------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (372)
T 1k8k_C 132 ----------------WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELM 195 (372)
T ss_dssp ----------------EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEE
T ss_pred ----------------eeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhhe
Confidence 01122335688999999997 77999999999999999764321100 0122356
Q ss_pred ccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEE
Q 016185 308 QKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIW 387 (394)
Q Consensus 308 ~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 387 (394)
..+..|...+.+++|+|++ .+|++++.|+.|++||+.+++ .+..+. .|..+|.+++|+|++++|+++ .|+.|+
T Consensus 196 ~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~--~~~~~~--~~~~~v~~~~~~~~~~~l~~~-~d~~i~ 268 (372)
T 1k8k_C 196 FESSSSCGWVHGVCFSANG--SRVAWVSHDSTVCLADADKKM--AVATLA--SETLPLLAVTFITESSLVAAG-HDCFPV 268 (372)
T ss_dssp EECCCCSSCEEEEEECSSS--SEEEEEETTTEEEEEEGGGTT--EEEEEE--CSSCCEEEEEEEETTEEEEEE-TTSSCE
T ss_pred EecCCCCCeEEEEEECCCC--CEEEEEeCCCEEEEEECCCCc--eeEEEc--cCCCCeEEEEEecCCCEEEEE-eCCeEE
Confidence 6777888999999999999 699999999999999999885 566676 778899999999999988888 899999
Q ss_pred EEEcCC
Q 016185 388 RWDAIP 393 (394)
Q Consensus 388 iwd~~~ 393 (394)
+|++.+
T Consensus 269 i~~~~~ 274 (372)
T 1k8k_C 269 LFTYDS 274 (372)
T ss_dssp EEEEET
T ss_pred EEEccC
Confidence 999865
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.8e-35 Score=264.50 Aligned_cols=261 Identities=21% Similarity=0.352 Sum_probs=214.1
Q ss_pred Ccccce-EEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccce
Q 016185 81 DKEESF-YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159 (394)
Q Consensus 81 ~~~~~v-~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~ 159 (394)
+|...+ .++.+ +++ +|++|+.||.|++||+.+++.+..+.+|.+.|.+++|+| ++ ++++++.
T Consensus 119 ~h~~~v~~~~~~----~~~-~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~-~l~s~s~---------- 181 (464)
T 3v7d_B 119 GHMTSVITCLQF----EDN-YVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GG-ILVSGST---------- 181 (464)
T ss_dssp CCSSSCEEEEEE----ETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-TT-EEEEEET----------
T ss_pred CCCCCcEEEEEE----CCC-EEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcC-CC-EEEEEeC----------
Confidence 566664 44433 466 999999999999999999999999999999999999998 44 8999999
Q ss_pred eeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecC-CCCeeEEeeccCCcEEEEEccccceeecc
Q 016185 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 160 ~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 238 (394)
||.|++||+++++.+..+. +|...|.+++|++ .++.++++++.||.|++||+++.......
T Consensus 182 ---------------dg~i~vwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~ 243 (464)
T 3v7d_B 182 ---------------DRTVRVWDIKKGCCTHVFE---GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 243 (464)
T ss_dssp ---------------TSCEEEEETTTTEEEEEEC---CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC---
T ss_pred ---------------CCCEEEEECCCCcEEEEEC---CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccc
Confidence 9999999999999999888 8999999999984 27789999999999999999985432211
Q ss_pred ccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeE
Q 016185 239 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 318 (394)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~ 318 (394)
...................+....+|...+.++..+++++++++.|+.|++||+++++ .+..+..|...|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~---------~~~~~~~~~~~v~ 314 (464)
T 3v7d_B 244 GEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK---------CLYILSGHTDRIY 314 (464)
T ss_dssp ---CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE---------EEEEECCCSSCEE
T ss_pred cccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc---------EEEEecCCCCCEE
Confidence 1000000000011111223567888999999999999999999999999999998765 6777888999999
Q ss_pred EEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 319 FIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+++|+|++ .++++|+.||.|++||+.++ ..+..+. +|...|.+++|+ +++|++++.||.|++||+.+
T Consensus 315 ~~~~~~~~--~~l~sg~~dg~i~vwd~~~~--~~~~~~~--~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 315 STIYDHER--KRCISASMDTTIRIWDLENG--ELMYTLQ--GHTALVGLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp EEEEETTT--TEEEEEETTSCEEEEETTTT--EEEEEEC--CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred EEEEcCCC--CEEEEEeCCCcEEEEECCCC--cEEEEEe--CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 99999999 68999999999999999987 4677777 889999999997 57999999999999999875
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-35 Score=262.68 Aligned_cols=281 Identities=15% Similarity=0.186 Sum_probs=222.4
Q ss_pred EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEEC----CCCe------eEEEEEe---
Q 016185 60 VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV----SNEK------LHKSFVG--- 126 (394)
Q Consensus 60 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~----~~~~------~~~~~~~--- 126 (394)
+.+|++..... .+..+ .|..+|.+++|+ |+++.+|++|+.||.|++||+ .+++ ....+..
T Consensus 27 ~~~~~~~~~~~--~~~~~---~~~~~v~~~~~s--~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (425)
T 1r5m_A 27 DSSDDLDGFVK--ILKEI---VKLDNIVSSTWN--PLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFA 99 (425)
T ss_dssp -------CCCE--ECEEE---EECSCCSEEEEC--SSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCC
T ss_pred cccccchhhhh--heeee---eccCceEEEEEC--CCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccc
Confidence 56777655443 33322 466899999988 888768999999999999999 8887 4555554
Q ss_pred -------cCCceeEEEEcCCCCcEEEEcee--eeEEeecc-------------ceeeeeeec-cceeeeccCCcEEEEEe
Q 016185 127 -------HGDSINEIRTQPLKPSLVVSASK--VIIISSLS-------------LICLLLFIR-SNCLRVGQDESVRLWNV 183 (394)
Q Consensus 127 -------~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~-------------~~~~~~~~~-~~~~~~~~d~~i~vwd~ 183 (394)
|...|.+++|+| ++.+|++++. .+++|+.. +.++.+.++ ..+++++.|+.|++||+
T Consensus 100 ~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 100 LSASSGKTTNQVTCLAWSH-DGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp CC------CBCEEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred ccccccCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 677999999999 7788888876 78888742 233334443 45888999999999999
Q ss_pred cCCcEEEEeeccCCCccc---------------EEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCC
Q 016185 184 QTGICILIFAGAGGHRNE---------------VLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSK 248 (394)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~---------------i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 248 (394)
++++.+..+. .+... +.+++|+| ++ .+++++.||.|++||+++
T Consensus 179 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~g~i~~~d~~~----------------- 236 (425)
T 1r5m_A 179 ISGTVMQHFE---LKETGGSSINAENHSGDGSLGVDVEWVD-DD-KFVIPGPKGAIFVYQITE----------------- 236 (425)
T ss_dssp TTTEEEEEEC---CC---------------CCCBSCCEEEE-TT-EEEEECGGGCEEEEETTC-----------------
T ss_pred CCCcEEEEee---ccccCccceeeccccCCcceeeEEEEcC-CC-EEEEEcCCCeEEEEEcCC-----------------
Confidence 9999988887 56555 89999998 65 488999999999999998
Q ss_pred CCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecC
Q 016185 249 FPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDF 326 (394)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 326 (394)
..++..+..|...|.+++|+ ++++++++.|+.|++||+++.+ .+..+..|...+.+++|+|++
T Consensus 237 ------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 237 ------KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN---------SQNCFYGHSQSIVSASWVGDD 301 (425)
T ss_dssp ------SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS---------CSEEECCCSSCEEEEEEETTT
T ss_pred ------CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc---------cceEecCCCccEEEEEECCCC
Confidence 34566777899999999998 7799999999999999999876 466677788999999999988
Q ss_pred CcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 327 HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 327 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
++++++.|+.|++||+.++ ..+..+. .|...|.+++|+|++++|++++.||.|++||+.
T Consensus 302 ---~l~~~~~d~~i~i~d~~~~--~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 302 ---KVISCSMDGSVRLWSLKQN--TLLALSI--VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp ---EEEEEETTSEEEEEETTTT--EEEEEEE--CTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred ---EEEEEeCCCcEEEEECCCC--cEeEecc--cCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 7999999999999999887 4566666 778899999999999999999999999999985
No 88
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-34 Score=259.64 Aligned_cols=285 Identities=20% Similarity=0.328 Sum_probs=239.0
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
..++|+.++...+... ...+....+.+|.+.|++++|++ +++++++.|+ |++||+.+++.+..+. .
T Consensus 131 ~l~sg~~dg~i~vwd~--~~~~~~~~~~~h~~~v~~~~~~~------~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~ 197 (445)
T 2ovr_B 131 RIVSGSDDNTLKVWSA--VTGKCLRTLVGHTGGVWSSQMRD------NIIISGSTDRTLKVWNAETGECIHTLY-----G 197 (445)
T ss_dssp EEEEEETTSCEEEEET--TTCCEEEECCCCSSCEEEEEEET------TEEEEEETTSCEEEEETTTTEEEEEEC-----C
T ss_pred EEEEEECCCcEEEEEC--CCCcEEEEEcCCCCCEEEEEecC------CEEEEEeCCCeEEEEECCcCcEEEEEC-----C
Confidence 3567777777666644 34567778899999999999984 5899999988 9999999998888877 6
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeecc--
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLS-- 157 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~-- 157 (394)
|...|.++++. ++ .+++|+.||.|++||+.+++.+..+.+|...|.+++|. +..+++++. .+++|+..
T Consensus 198 h~~~v~~~~~~----~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~iwd~~~~ 269 (445)
T 2ovr_B 198 HTSTVRCMHLH----EK-RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD---GRRVVSGAYDFMVKVWDPETE 269 (445)
T ss_dssp CSSCEEEEEEE----TT-EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC---SSCEEEEETTSCEEEEEGGGT
T ss_pred CCCcEEEEEec----CC-EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEEC---CCEEEEEcCCCEEEEEECCCC
Confidence 78899988875 45 89999999999999999999999999999999999993 466777765 78888862
Q ss_pred -----------ceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEE
Q 016185 158 -----------LICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKI 226 (394)
Q Consensus 158 -----------~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~i 226 (394)
.+..+.+++..+++++.|+.|++||+++++.+..+. +|...+.++.++ ++++++++.||.|++
T Consensus 270 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~---~~~l~~~~~dg~i~v 343 (445)
T 2ovr_B 270 TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT---GHQSLTSGMELK---DNILVSGNADSTVKI 343 (445)
T ss_dssp EEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEEC---CCCSCEEEEEEE---TTEEEEEETTSCEEE
T ss_pred cEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEc---CCcccEEEEEEe---CCEEEEEeCCCeEEE
Confidence 233444467789999999999999999999999888 799999998885 458999999999999
Q ss_pred EEccccceeeccccccCCCCCCCCccccccceeeeec---CCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCc
Q 016185 227 WSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV---HSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGT 303 (394)
Q Consensus 227 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 303 (394)
||++++ .++..+.. |...|.+++|+++++++++.||.|++||+.+++
T Consensus 344 wd~~~~-----------------------~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~------- 393 (445)
T 2ovr_B 344 WDIKTG-----------------------QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE------- 393 (445)
T ss_dssp EETTTC-----------------------CEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC-------
T ss_pred EECCCC-----------------------cEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc-------
Confidence 999883 34555554 888999999999999999999999999999876
Q ss_pred ceecccc-----cCCCCCeEEEEEeecCCcceEEEEeCCCc----EEEEEecCC
Q 016185 304 ADILQKY-----PVPECDIWFIKFSCDFHYNAAAIGNREGK----IFVWELQSS 348 (394)
Q Consensus 304 ~~~~~~~-----~~~~~~i~~~~~~~~~~~~~l~~~~~dg~----i~iwd~~~~ 348 (394)
.+..+ ..+...|++++|+|++ .++++|+.||. |.+||+...
T Consensus 394 --~~~~~~~~~~~~~~~~v~~~~~s~~~--~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 394 --FIRNLVTLESGGSGGVVWRIRASNTK--LVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp --EEEEEEECTTGGGTCEEEEEEECSSE--EEEEEECSSSSSCCEEEEEECCCC
T ss_pred --eeeeeeccccCCCCceEEEEEecCCE--EEEEEcccCCCCccEEEEEECCCC
Confidence 33333 4677889999999999 79999999998 999999764
No 89
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.5e-35 Score=280.52 Aligned_cols=244 Identities=21% Similarity=0.355 Sum_probs=208.4
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC-----eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE-----KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISS 155 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~ 155 (394)
.|.+.|++++|+ +++..+|++|+.|+.|++||+.+. ...+.+.+|...|.+++|+| ++.+|++|+.
T Consensus 380 ~H~~~V~~v~~~--~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~------ 450 (694)
T 3dm0_A 380 AHTDMVTAIATP--IDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSW------ 450 (694)
T ss_dssp CCSSCEEEEECC--TTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEET------
T ss_pred cCCceeEEEEec--CCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeC------
Confidence 799999999987 766449999999999999998753 45678889999999999999 7899999999
Q ss_pred ccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEcccccee
Q 016185 156 LSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 235 (394)
|+.|++||+.+++....+. +|...|.+++|+| ++.+|++++.|++|++||.......
T Consensus 451 -------------------Dg~v~vwd~~~~~~~~~~~---~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 451 -------------------DGELRLWDLAAGVSTRRFV---GHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp -------------------TSEEEEEETTTTEEEEEEE---CCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEE
T ss_pred -------------------CCcEEEEECCCCcceeEEe---CCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcce
Confidence 9999999999999999888 8999999999999 9999999999999999998652110
Q ss_pred eccccccCCCCCCCCccccccceeeeecCCCceEEEEEeC----cEEEEeecCCeEEEecCCCCCCCCCCCcceeccccc
Q 016185 236 VEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
.......+|...|.+++|++ ..+++++.|+.|++||+++.+ ....+.
T Consensus 508 --------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~---------~~~~~~ 558 (694)
T 3dm0_A 508 --------------------TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK---------LRSTLA 558 (694)
T ss_dssp --------------------EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC---------EEEEEC
T ss_pred --------------------eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc---------EEEEEc
Confidence 00112246889999999982 479999999999999998765 567788
Q ss_pred CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
.|...|++++|+|++ .+|++++.||.|++||+.+++ .+..+. +...|.+++|+|++.+|++++ |+.|+|||+
T Consensus 559 ~h~~~v~~v~~spdg--~~l~sg~~Dg~i~iwd~~~~~--~~~~~~---~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~ 630 (694)
T 3dm0_A 559 GHTGYVSTVAVSPDG--SLCASGGKDGVVLLWDLAEGK--KLYSLE---ANSVIHALCFSPNRYWLCAAT-EHGIKIWDL 630 (694)
T ss_dssp CCSSCEEEEEECTTS--SEEEEEETTSBCEEEETTTTE--EEECCB---CSSCEEEEEECSSSSEEEEEE-TTEEEEEET
T ss_pred CCCCCEEEEEEeCCC--CEEEEEeCCCeEEEEECCCCc--eEEEec---CCCcEEEEEEcCCCcEEEEEc-CCCEEEEEC
Confidence 899999999999999 699999999999999999874 444444 336799999999998887765 567999998
Q ss_pred CC
Q 016185 392 IP 393 (394)
Q Consensus 392 ~~ 393 (394)
++
T Consensus 631 ~~ 632 (694)
T 3dm0_A 631 ES 632 (694)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-35 Score=260.53 Aligned_cols=268 Identities=16% Similarity=0.229 Sum_probs=220.2
Q ss_pred eeecCCCceeeeecccccccceeeeec-cCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQ-EGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
.++++.+....+...... +....+. .|...|++++|+| ++++|++++.|+ |++||+.+++.+..+. .
T Consensus 106 l~~~~~d~~v~lw~~~~~--~~~~~~~~~~~~~v~~v~~s~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~ 174 (401)
T 4aez_A 106 VVAVALERNVYVWNADSG--SVSALAETDESTYVASVKWSH----DGSFLSVGLGNGLVDIYDVESQTKLRTMA-----G 174 (401)
T ss_dssp EEEEEETTEEEEEETTTC--CEEEEEECCTTCCEEEEEECT----TSSEEEEEETTSCEEEEETTTCCEEEEEC-----C
T ss_pred EEEEECCCeEEEeeCCCC--cEeEeeecCCCCCEEEEEECC----CCCEEEEECCCCeEEEEECcCCeEEEEec-----C
Confidence 344555666555544333 3334444 3899999999999 789999999988 9999999998888877 6
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECC-CCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS-NEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
|...|.+++|. +. ++++|+.||.|++||+. .......+.+|...|.+++|+| ++.+|++++.
T Consensus 175 ~~~~v~~~~~~----~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~----------- 237 (401)
T 4aez_A 175 HQARVGCLSWN----RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGN----------- 237 (401)
T ss_dssp CSSCEEEEEEE----TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEET-----------
T ss_pred CCCceEEEEEC----CC-EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeC-----------
Confidence 88899999884 45 99999999999999998 5677888999999999999999 8899999999
Q ss_pred eeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeec--cCCcEEEEEccccceeecc
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG--MDNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~ 238 (394)
|+.|++||+++++....+. .|...|.+++|+|.+..++++++ .|+.|++||+++++
T Consensus 238 --------------d~~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~----- 295 (401)
T 4aez_A 238 --------------DNVVQIWDARSSIPKFTKT---NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA----- 295 (401)
T ss_dssp --------------TSCEEEEETTCSSEEEEEC---CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-----
T ss_pred --------------CCeEEEccCCCCCccEEec---CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-----
Confidence 9999999999999988887 79999999999994456667655 79999999999832
Q ss_pred ccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEE--eecCCeEEEecCCCCCCCCCCCcceecccccCCC
Q 016185 239 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILS--KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE 314 (394)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~--~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 314 (394)
++..+. +...|.+++|+ ++++++ |+.||.|++||+.+++. .....+..|.
T Consensus 296 ------------------~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~-------~~~~~~~~h~ 349 (401)
T 4aez_A 296 ------------------RVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL-------TKQVDIPAHD 349 (401)
T ss_dssp ------------------EEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE-------EEEEEEECCS
T ss_pred ------------------EEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc-------eeEEEecCCC
Confidence 344443 66789999997 778888 45899999999987531 1344567888
Q ss_pred CCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 315 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
..|.+++|+|++ .+|++++.||.|++|++.+++
T Consensus 350 ~~v~~~~~s~dg--~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 350 TRVLYSALSPDG--RILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SCCCEEEECTTS--SEEEEECTTSEEEEEECCC--
T ss_pred CCEEEEEECCCC--CEEEEEeCCCcEEEEECCCCc
Confidence 999999999999 699999999999999999875
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.2e-36 Score=262.21 Aligned_cols=262 Identities=14% Similarity=0.189 Sum_probs=212.2
Q ss_pred CccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcC-CCCcEEEEeecCCe
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNV-DGIPFLVAGGINGI 109 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~l~s~~~dg~ 109 (394)
|...|++++|+|+...++.+|++++.|+ |++||+.+++.+..+. .|...|.+++|+ | ++. +|++++.||.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~--~~~~~-~l~s~~~dg~ 139 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV-----GHGNAINELKFH--PRDPN-LLLSVSKDHA 139 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE-----SCCSCEEEEEEC--SSCTT-EEEEEETTSC
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec-----CCCCcEEEEEEC--CCCCC-EEEEEeCCCe
Confidence 6688999999994332378999999998 9999999999888877 688899999988 8 777 9999999999
Q ss_pred EEEEECCCCeeEEEE---EecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 110 IRVIDVSNEKLHKSF---VGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 110 i~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
|++||+.+++.+..+ ..|...|.+++|+| ++.+|++++. |+.|++||++++
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-------------------------dg~i~i~d~~~~ 193 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGM-------------------------DHSLKLWRINSK 193 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECT-TSSEEEEEET-------------------------TSCEEEEESCSH
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECC-CCCEEEEecC-------------------------CCCEEEEECCCC
Confidence 999999999999888 68999999999999 7889999999 999999999876
Q ss_pred cEEEEee-------------------------ccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccc
Q 016185 187 ICILIFA-------------------------GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 241 (394)
Q Consensus 187 ~~~~~~~-------------------------~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 241 (394)
+....+. ....|...|.+++|+ +++|++++.|+.|++||+++.........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~- 269 (366)
T 3k26_A 194 RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDIDKIK- 269 (366)
T ss_dssp HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCGGGCC-
T ss_pred ccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccccccc-
Confidence 5433222 112489999999998 45899999999999999988543221110
Q ss_pred cCCCCCCCCccccccceeeeecCCCceEEEEEe----CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC--CC
Q 016185 242 WTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP--EC 315 (394)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~ 315 (394)
........+..+..|...|.+++|+ +++|++++.||.|++||+++++. .......+..| ..
T Consensus 270 --------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~~~~~ 336 (366)
T 3k26_A 270 --------PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP-----HKAKCTTLTHHKCGA 336 (366)
T ss_dssp --------TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG-----GGCEEEEECCTTCCS
T ss_pred --------cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC-----ccccceEEcccccCC
Confidence 0111123466788899999999886 67999999999999999998752 11123355666 78
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEec
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQ 346 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 346 (394)
.|++++|+|++ .+|++++.||.|++||+.
T Consensus 337 ~v~~~~~s~~~--~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 337 AIRQTSFSRDS--SILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CEEEEEECTTS--SEEEEEETTSEEEEEEC-
T ss_pred ceEEEEeCCCC--CeEEEEeCCCEEEEEEec
Confidence 99999999999 699999999999999985
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.7e-35 Score=259.85 Aligned_cols=267 Identities=16% Similarity=0.213 Sum_probs=217.5
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCc
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDK 82 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~ 82 (394)
+|+|. +..+.+.............+.+|...|++|+|+| +|++||+|+.|+ |+|||+.+++.+..+. .|
T Consensus 119 lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp----dg~~lasgs~Dg~v~iWd~~~~~~~~~~~-----~h 188 (420)
T 4gga_A 119 LAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK----EGNYLAVGTSSAEVQLWDVQQQKRLRNMT-----SH 188 (420)
T ss_dssp EEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT----TSSEEEEEETTSCEEEEETTTTEEEEEEC-----CC
T ss_pred EEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC----CCCEEEEEECCCeEEEEEcCCCcEEEEEe-----CC
Confidence 56665 5566666554444433444567889999999999 799999999999 9999999999888877 67
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC-eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE-KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
...+.++++. +. +|++|+.|+.+++||.... ..+..+.+|...+..+.|+| ++.++++++.
T Consensus 189 ~~~v~~~s~~----~~-~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~------------ 250 (420)
T 4gga_A 189 SARVGSLSWN----SY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGN------------ 250 (420)
T ss_dssp SSCEEEEEEE----TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEET------------
T ss_pred CCceEEEeeC----CC-EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecC-CCCeeeeeec------------
Confidence 7788777654 56 9999999999999998764 56778899999999999999 7899999999
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcE----EEEeeccCCCcccEEEEEecCCCCeeEEe--eccCCcEEEEEcccccee
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGIC----ILIFAGAGGHRNEVLSVDFHPSDIYRIAS--CGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~l~s--~~~dg~v~iwd~~~~~~~ 235 (394)
|+.+++|+..+++. +.... .|...|.+++|+|.+..++++ |+.|+.|++||+.+++
T Consensus 251 -------------D~~v~i~~~~~~~~~~~~~~~~~---~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~-- 312 (420)
T 4gga_A 251 -------------DNLVNVWPSAPGEGGWVPLQTFT---QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-- 312 (420)
T ss_dssp -------------TSCEEEEESSCCSSCSCCSEEEC---CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE--
T ss_pred -------------cccceEEeeccccccceeeeeec---ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc--
Confidence 99999999987652 34444 689999999999966666665 4689999999999843
Q ss_pred eccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEee--cCCeEEEecCCCCCCCCCCCcceeccccc
Q 016185 236 VEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKS--VDNEIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
....+.. ...+.++.|. ++.+++++ .|+.|++||+.+++ .+..+.
T Consensus 313 ---------------------~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~---------~v~~l~ 361 (420)
T 4gga_A 313 ---------------------CLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KVAELK 361 (420)
T ss_dssp ---------------------EEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EEEEEC
T ss_pred ---------------------cceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc---------EEEEEc
Confidence 3444444 4567778887 66666654 79999999999876 678889
Q ss_pred CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
+|...|++++|+|++ .+|++|+.|++|++||+.+..
T Consensus 362 gH~~~V~~l~~spdg--~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 362 GHTSRVLSLTMSPDG--ATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp CCSSCEEEEEECTTS--SCEEEEETTTEEEEECCSCSS
T ss_pred CCCCCEEEEEEcCCC--CEEEEEecCCeEEEEECCCCC
Confidence 999999999999999 689999999999999998764
No 93
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-37 Score=270.26 Aligned_cols=252 Identities=10% Similarity=0.119 Sum_probs=201.2
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC--eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccce
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE--KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~ 159 (394)
+.++|.+++|+ |+++ +|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+| ++++|++++.
T Consensus 10 ~~~~v~~~~~s--~~g~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~---------- 75 (377)
T 3dwl_C 10 LPKPSYEHAFN--SQRT-EFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQ---------- 75 (377)
T ss_dssp CSSCCSCCEEC--SSSS-EEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEET----------
T ss_pred CCCcEEEEEEC--CCCC-EEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeC----------
Confidence 46688899988 9999 9999999999999999988 77888899999999999999 7789999999
Q ss_pred eeeeeeccceeeeccCCcEEEEEecCCc---EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceee
Q 016185 160 CLLLFIRSNCLRVGQDESVRLWNVQTGI---CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYV 236 (394)
Q Consensus 160 ~~~~~~~~~~~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 236 (394)
|+.|++||+.+++ ....+. +|...|.+++|+| ++++|++++.|+.|++||++..+.
T Consensus 76 ---------------d~~v~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~-- 134 (377)
T 3dwl_C 76 ---------------DRNAYVYEKRPDGTWKQTLVLL---RLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQEND-- 134 (377)
T ss_dssp ---------------TSSEEEC------CCCCEEECC---CCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-------
T ss_pred ---------------CCeEEEEEcCCCCceeeeeEec---ccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCccc--
Confidence 9999999999877 555555 7999999999999 999999999999999999988321
Q ss_pred ccccccCCCCCCCCccccccceeeeec-CCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCC---------CCcc
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASV-HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPG---------EGTA 304 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~---------~~~~ 304 (394)
......+.. |...|.+++|+ ++++++++.|+.|++||++..+.... ....
T Consensus 135 ------------------~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 196 (377)
T 3dwl_C 135 ------------------WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFN 196 (377)
T ss_dssp ------------------CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEE
T ss_pred ------------------ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchh
Confidence 112445566 99999999998 77999999999999999975432110 0123
Q ss_pred eecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCcee--eEEeccCCccCCeeEEEeccCCCEEEEecc
Q 016185 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVL--IARLSHAQSKSPIRQTAMSYDGSTILSCCE 382 (394)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 382 (394)
..+..+ .|...|.+++|+|++ .+|++++.||.|++||+.+++... +..+. +|..+|.+++|+|++++|++++.
T Consensus 197 ~~~~~~-~~~~~v~~~~~sp~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 197 TVCAEY-PSGGWVHAVGFSPSG--NALAYAGHDSSVTIAYPSAPEQPPRALITVK--LSQLPLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp EEEECC-CCSSSEEEEEECTTS--SCEEEEETTTEEC-CEECSTTSCEEECCCEE--CSSSCEEEEEEEETTEEEEEESS
T ss_pred hhhhcc-cCCceEEEEEECCCC--CEEEEEeCCCcEEEEECCCCCCcceeeEeec--CCCCceEEEEEcCCCCEEEEEcC
Confidence 355556 888999999999999 689999999999999999886421 45555 88899999999999999999987
Q ss_pred CCeEEEEEcC
Q 016185 383 DGAIWRWDAI 392 (394)
Q Consensus 383 dg~i~iwd~~ 392 (394)
|+.+ +|+..
T Consensus 272 ~~~~-~~~~~ 280 (377)
T 3dwl_C 272 YSPI-LLQGN 280 (377)
T ss_dssp SSEE-EECCC
T ss_pred CcEE-EEEeC
Confidence 7666 67654
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=258.13 Aligned_cols=287 Identities=13% Similarity=0.156 Sum_probs=221.8
Q ss_pred eecCC---CceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc-eeEEeeeccc
Q 016185 5 AIGCE---PLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG-VIAALQSYVD 79 (394)
Q Consensus 5 a~g~~---~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~-~~~~~~~~~~ 79 (394)
++|+. +....+............ ..+|..+|++++|+|+ ..++++|++++.|+ |++||+.+++ .+..+.
T Consensus 35 ~~~s~~~~d~~v~iw~~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---- 108 (357)
T 3i2n_A 35 TMGNFARGTGVIQLYEIQHGDLKLLR-EIEKAKPIKCGTFGAT-SLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK---- 108 (357)
T ss_dssp EEEC--CCCEEEEEEEECSSSEEEEE-EEEESSCEEEEECTTC-CTTTCCEEEEETTSCEEEECTTSCSSCSEEEC----
T ss_pred EecCccCCCcEEEEEeCCCCccccee-eecccCcEEEEEEcCC-CCCCceEEEecCCCeEEEEeCCCCCccEEEEE----
Confidence 44544 566666655444333222 2379999999999992 11268999999988 9999999887 666666
Q ss_pred CCcccceEEEEEE----EcCCCCcEEEEeecCCeEEEEECCCCe-eEEEEEecCC----ceeEEE----EcCCCCcEEEE
Q 016185 80 EDKEESFYTVSWA----CNVDGIPFLVAGGINGIIRVIDVSNEK-LHKSFVGHGD----SINEIR----TQPLKPSLVVS 146 (394)
Q Consensus 80 ~~~~~~v~~~~~~----~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~~l~s 146 (394)
.|...|.+++|. ++|+++ +|++++.||.|++||+.+++ .+..+..|.+ .+.+++ |+| ++.++++
T Consensus 109 -~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~ 185 (357)
T 3i2n_A 109 -GHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCA 185 (357)
T ss_dssp -CCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEE
T ss_pred -ecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEE
Confidence 688899999874 458898 99999999999999999886 7778876654 788998 677 7889999
Q ss_pred ceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCC--CCeeEEeeccCCcE
Q 016185 147 ASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPS--DIYRIASCGMDNTV 224 (394)
Q Consensus 147 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~s~~~dg~v 224 (394)
++. |+.|++||+++++...... |...|.+++|+|. ++.+|++++.||.|
T Consensus 186 ~~~-------------------------d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 186 GYD-------------------------NGDIKLFDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp EET-------------------------TSEEEEEETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred Ecc-------------------------CCeEEEEECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 998 9999999999988866654 8899999999984 57889999999999
Q ss_pred EEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEeecCCeEEEecCCCCCCCC--
Q 016185 225 KIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSP-- 299 (394)
Q Consensus 225 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~dg~i~~~d~~~~~~~~-- 299 (394)
++||+++.+... .........|...|.+++|+ ++ ++++++.||.|++||++......
T Consensus 237 ~i~d~~~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 298 (357)
T 3i2n_A 237 HVFDMRTQHPTK------------------GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKK 298 (357)
T ss_dssp EEEEEEEEETTT------------------EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--C
T ss_pred EEEeCcCCCccc------------------ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccc
Confidence 999999843100 11122445899999999998 44 89999999999999998764321
Q ss_pred --------CCCcceecccccCCCCCeEEEEEeecCCcceEE-EEeCCCcEEEEEecCCC
Q 016185 300 --------GEGTADILQKYPVPECDIWFIKFSCDFHYNAAA-IGNREGKIFVWELQSSP 349 (394)
Q Consensus 300 --------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~ 349 (394)
..+....+..+..|...|++++|+|++ .+|+ +++.||.|++||+.+.+
T Consensus 299 ~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 299 DSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDK--RGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSS--TTEEEEEETTSEEEEEEECC--
T ss_pred cCCCCccccccccceeeccccCCCCeeEEEEcCCC--CeEEEEecCCCcEEEEECCCcc
Confidence 111224567788899999999999999 4676 89999999999998753
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-34 Score=255.24 Aligned_cols=286 Identities=14% Similarity=0.126 Sum_probs=215.0
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
..++|+.++.+.+.............+.+|...|++++|+|. ++++|++++.|+ |++||+.+ ..+..+..+. .
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~--~ 161 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF---NTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD--S 161 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT---EEEEEEEEETTTEEEEEETTS-CEEEEEECCC--C
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC---CCCEEEEEeCCCEEEEEECCC-CceEEEeccC--C
Confidence 467788888877776665554444444579999999999982 478999999998 99999885 5555555332 4
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
+...|.+++|+ |+++ +|++|+.||.|++||+ +++.+..+.+|...|.+++|+|++..++++++.
T Consensus 162 ~~~~v~~~~~~--~~~~-~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------------ 225 (383)
T 3ei3_B 162 WDYWYCCVDVS--VSRQ-MLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSV------------ 225 (383)
T ss_dssp SSCCEEEEEEE--TTTT-EEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEET------------
T ss_pred CCCCeEEEEEC--CCCC-EEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeC------------
Confidence 56889999998 9999 9999999999999998 678889999999999999999944449999999
Q ss_pred eeeeccceeeeccCCcEEEEEecC----CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeec
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQT----GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 237 (394)
|+.|++||+++ +..+..+. |...|.+++|+|.++.+|++++.|+.|++||+++.+....
T Consensus 226 -------------d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 226 -------------DATVKLWDLRNIKDKNSYIAEMP----HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp -------------TSEEEEEEGGGCCSTTCEEEEEE----CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred -------------CCEEEEEeCCCCCcccceEEEec----CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 99999999998 66666664 8999999999986778899999999999999998543211
Q ss_pred cccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC--C
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV--P 313 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~--~ 313 (394)
.... ..... ....++...-.....+..+.++ +++ +++.|+.|++||+.+++ .+..+.. +
T Consensus 289 ~~~~----~~~~~--~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~---------~~~~l~~~~~ 351 (383)
T 3ei3_B 289 IIIH----PHRQF--QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG---------LVHQLRDPNA 351 (383)
T ss_dssp EEEC----CBCCC--TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC---------EEEEECBTTB
T ss_pred cccc----ccccc--ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc---------eeeeecCCCC
Confidence 1000 00000 0000111111112344456665 445 88899999999999876 4555655 4
Q ss_pred CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecC
Q 016185 314 ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 314 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
...+..++|+|++ .+|++++ |+.|++||+++
T Consensus 352 ~~~~~~~~~s~~g--~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 352 AGIISLNKFSPTG--DVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CSCCCEEEECTTS--SEEEEEE-TTEEEEEECC-
T ss_pred CceEEEEEEecCc--cEEEEec-CCcEEEEecCC
Confidence 5677888999999 6899997 99999999874
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.7e-36 Score=270.02 Aligned_cols=294 Identities=14% Similarity=0.104 Sum_probs=208.3
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
.+|+|+.++.+.+.............+.+|.++|++|+|+|. ++++|++++.|+ |++||+.++.. ..+... ..
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~---~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~--~~ 207 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL---NTNQFYASSMEGTTRLQDFKGNIL-RVFASS--DT 207 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS---CTTEEEEECSSSCEEEEETTSCEE-EEEECC--SS
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC---CCCEEEEEeCCCEEEEeeccCCce-eEEecc--CC
Confidence 378899999988887666665566667899999999999983 578999999999 99999876543 333321 12
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
+...+.+++|+ |+++ +|++|+.||.|++||+. ++.+..+.+|...|.+++|+|++..++++++.
T Consensus 208 ~~~~~~~~~~~--~~~~-~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~------------ 271 (435)
T 4e54_B 208 INIWFCSLDVS--ASSR-MVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASV------------ 271 (435)
T ss_dssp CSCCCCCEEEE--TTTT-EEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEET------------
T ss_pred CCccEEEEEEC--CCCC-EEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecC------------
Confidence 34456666666 9999 99999999999999985 56677888999999999999966778999999
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccc
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 241 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 241 (394)
|+.|++||+++++....+....+|...|++++|+| ++.+|++++.||.|++||++++.........
T Consensus 272 -------------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~ 337 (435)
T 4e54_B 272 -------------DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLIPH 337 (435)
T ss_dssp -------------TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred -------------cceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEecc
Confidence 99999999988765544433337999999999999 9999999999999999999985432211100
Q ss_pred cCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEE-EeecCCeEEEecCCCCCCCCCCCcceeccc-ccCCCCCe
Q 016185 242 WTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFIL-SKSVDNEIVLWEPKMKEQSPGEGTADILQK-YPVPECDI 317 (394)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~i 317 (394)
..... ....++.........+..+.+. +..++ ++..++.|++||..+++ .+.. ...|...|
T Consensus 338 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~---------~~~~l~~~~~~~v 402 (435)
T 4e54_B 338 PHRHF------QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK---------MMCQLYDPESSGI 402 (435)
T ss_dssp CCCCC------SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC---------EEEEECCSSCCCC
T ss_pred ccccc------ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc---------EEEEEeCCCCCcE
Confidence 00000 0000111111111222223322 33333 33345689999999876 3444 34567778
Q ss_pred EEE-EEeecCCcceEEEEeCCCcEEEEEecCCCc
Q 016185 318 WFI-KFSCDFHYNAAAIGNREGKIFVWELQSSPP 350 (394)
Q Consensus 318 ~~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 350 (394)
.++ +|+|++ .+|++|+ |+.|+|||+++++.
T Consensus 403 ~s~~~fspdg--~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 403 SSLNEFNPMG--DTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CCEEEECTTS--SCEEEEC-SSEEEECCCC----
T ss_pred EEEEEECCCC--CEEEEEc-CCcEEEEECCcCee
Confidence 777 699999 5788876 88999999988753
No 97
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-36 Score=270.47 Aligned_cols=285 Identities=10% Similarity=0.053 Sum_probs=209.0
Q ss_pred cCCCceeeeecccccccc--eeeeeccCccceeEEEEEeeC--CCcceEEEEecCCc-EEEEEcCCCceeE----Eee--
Q 016185 7 GCEPLVGSLTPSKKREYR--VTNKLQEGKRPLYAVVFNFID--SRYFNVFATVGGNR-VTVYQCLEGGVIA----ALQ-- 75 (394)
Q Consensus 7 g~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~i~~sp~~--~~~~~~las~~~d~-i~vw~~~~~~~~~----~~~-- 75 (394)
|..+..+.+......... ....+.+|.+.|++++|+|.. ..++.+||+++.|+ |+|||+.++.... .+.
T Consensus 179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 344445555543333222 224467788999999999931 01367999999998 9999998764210 000
Q ss_pred ecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC-eeEEEEEecCCceeEE--EEcCCCC-cEEEEceeee
Q 016185 76 SYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE-KLHKSFVGHGDSINEI--RTQPLKP-SLVVSASKVI 151 (394)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~--~~~~~~~-~~l~s~~~~i 151 (394)
......|...|.+++|+ ++ . .|++|+.||+|++||+.++ .+...+.+|...|.++ +|+| ++ .+|++++.
T Consensus 259 ~~~l~~h~~~v~sv~~s--~~-~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~-- 331 (524)
T 2j04_B 259 SLTLSLADSLITTFDFL--SP-T-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAV-- 331 (524)
T ss_dssp SEEECCTTTCEEEEEES--SS-S-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-TSCCEEEEEET--
T ss_pred eEEEEcCCCCEEEEEec--CC-C-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC-CCCeEEEEecc--
Confidence 00112578899999997 54 4 7999999999999999876 4556788999999999 5677 55 89999999
Q ss_pred EEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcc--cEEEEEecCCCCeeEEeeccCCcEEEEEc
Q 016185 152 IISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRN--EVLSVDFHPSDIYRIASCGMDNTVKIWSM 229 (394)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~s~~~dg~v~iwd~ 229 (394)
|++|++||+++++....+. +|.. .|.+++|+| ++..|++++.|++|++||+
T Consensus 332 -----------------------D~tvklWD~~~~~~~~~~~---~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~ 384 (524)
T 2j04_B 332 -----------------------DGYFYIFNPKDIATTKTTV---SRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPS 384 (524)
T ss_dssp -----------------------TSEEEEECGGGHHHHCEEE---EECSCCSCCCEEEET-TTTEEEEECSSSEEEEEET
T ss_pred -----------------------CCeEEEEECCCCCcccccc---cccccCcccceEeCC-CcCeEEEeCCCCcEEEEEC
Confidence 9999999999888766665 4543 588999999 8888999999999999999
Q ss_pred cccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCC------
Q 016185 230 KEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE------ 301 (394)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~------ 301 (394)
+++ ..+..+.+|...|.+++|+ +++|++|+.||+|++||+.........
T Consensus 385 ~~~-----------------------~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~ 441 (524)
T 2j04_B 385 RAA-----------------------FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQ 441 (524)
T ss_dssp TCT-----------------------TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------C
T ss_pred ccc-----------------------ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccce
Confidence 983 3456677899999999998 789999999999999997543211100
Q ss_pred -------------C----------------cceecccccCCCCCeEEEEEeecCC-cceEEEEeCCCcEEEEEecCC
Q 016185 302 -------------G----------------TADILQKYPVPECDIWFIKFSCDFH-YNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 302 -------------~----------------~~~~~~~~~~~~~~i~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~ 348 (394)
+ ....+..+.+|...|.+++|+|+++ +.++|+|+.||.|+||++...
T Consensus 442 ~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 442 KSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred eeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 0 0122344566888999999999974 358999999999999998764
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=282.63 Aligned_cols=253 Identities=17% Similarity=0.211 Sum_probs=215.6
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECC--CCeeEEEEEecCCceeEEEEcCCC-CcEEEEceeeeEEeecc
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS--NEKLHKSFVGHGDSINEIRTQPLK-PSLVVSASKVIIISSLS 157 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~~i~~~~~~ 157 (394)
+|.++|.+++|+ |+++ +|++|+.||.|++||+. +++....+.+|.++|.+++|+|+. +.+|++++.
T Consensus 7 gH~~~V~~l~~s--~dg~-~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~-------- 75 (753)
T 3jro_A 7 AHNELIHDAVLD--YYGK-RLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-------- 75 (753)
T ss_dssp -CCCCEEEECCC--SSSC-CEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET--------
T ss_pred cCcceeEEEEEC--CCCC-eEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC--------
Confidence 789999999988 8998 99999999999999997 557788889999999999999832 789999999
Q ss_pred ceeeeeeeccceeeeccCCcEEEEEecCCc--EEEEeeccCCCcccEEEEEecCCC--CeeEEeeccCCcEEEEEccccc
Q 016185 158 LICLLLFIRSNCLRVGQDESVRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSD--IYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 158 ~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
||.|++||+++++ ....+. +|...|.+++|+| + +..+++|+.||.|++||++...
T Consensus 76 -----------------Dg~I~vwd~~~~~~~~~~~~~---~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 76 -----------------DGKVLIWKEENGRWSQIAVHA---VHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp -----------------TSCEEEEEEETTEEEEEEEEC---CCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSS
T ss_pred -----------------CCeEEEEECCCCccccccccc---CCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCC
Confidence 9999999999887 555555 7999999999999 7 8999999999999999998842
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeC---------------cEEEEeecCCeEEEecCCCCCCC
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG---------------DFILSKSVDNEIVLWEPKMKEQS 298 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~l~~~~~dg~i~~~d~~~~~~~ 298 (394)
.........|...|.++.|++ +++++++.||.|++||++++..
T Consensus 135 ---------------------~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~- 192 (753)
T 3jro_A 135 ---------------------TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ- 192 (753)
T ss_dssp ---------------------CCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT-
T ss_pred ---------------------CcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc-
Confidence 123446678999999999963 6899999999999999987642
Q ss_pred CCCCcceecccccCCCCCeEEEEEeec---CCcceEEEEeCCCcEEEEEecCCCceeeEEe-ccCCccCCeeEEEeccCC
Q 016185 299 PGEGTADILQKYPVPECDIWFIKFSCD---FHYNAAAIGNREGKIFVWELQSSPPVLIARL-SHAQSKSPIRQTAMSYDG 374 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~ 374 (394)
.......+..|...|++++|+|+ + .++++++.||.|++||+.+++......+ ....|...|++++|+|++
T Consensus 193 ----~~~~~~~~~~h~~~V~~l~~sp~~~~~--~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg 266 (753)
T 3jro_A 193 ----TYVLESTLEGHSDWVRDVAWSPTVLLR--SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG 266 (753)
T ss_dssp ----EEEEEEEECCCSSCEEEEEECCCCSSS--EEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT
T ss_pred ----cceeeeeecCCCCcEEEEEeccCCCCC--CEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC
Confidence 22356677889999999999999 6 7999999999999999998743222222 234688999999999999
Q ss_pred CEEEEeccCCeEEEEEcCC
Q 016185 375 STILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 375 ~~l~s~~~dg~i~iwd~~~ 393 (394)
++|++++.||.|++||+.+
T Consensus 267 ~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 267 NVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCEEEECSSSCEECCBCCS
T ss_pred CEEEEEcCCCEEEEEecCC
Confidence 9999999999999999873
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.6e-35 Score=263.34 Aligned_cols=254 Identities=16% Similarity=0.221 Sum_probs=197.7
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCe-----------eEEEEEecC------------CceeEEEEc
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK-----------LHKSFVGHG------------DSINEIRTQ 137 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~ 137 (394)
.+.+.|.+++|+ |+|+ +|++|+.||.|+|||+.+++ ....+.+|. ..|.+++|+
T Consensus 26 ~~~~~V~~v~~s--~~g~-~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFN--HSGE-LLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEEC--SSSS-EEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEEC--CCCC-EEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 467899999998 9999 99999999999999998776 578889998 889999999
Q ss_pred CCCC-cEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEE--------------------------
Q 016185 138 PLKP-SLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICIL-------------------------- 190 (394)
Q Consensus 138 ~~~~-~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~-------------------------- 190 (394)
|++. ..|++++. |+.|++||+.+++...
T Consensus 103 ~~~~~~~l~s~s~-------------------------d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (447)
T 3dw8_B 103 PQKNAAQFLLSTN-------------------------DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVF 157 (447)
T ss_dssp CCCSSSEEEEEEC-------------------------SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEE
T ss_pred CCCCcceEEEeCC-------------------------CCeEEEEecccccCCcceecccCccccccCcccccceEeccc
Confidence 9432 68899998 9999999998754321
Q ss_pred -------------EeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccc
Q 016185 191 -------------IFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 257 (394)
Q Consensus 191 -------------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (394)
.+ ..+|...|.+++|+| ++.+|++| .|+.|++||++......... ...
T Consensus 158 ~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~---------------~~~ 218 (447)
T 3dw8_B 158 RPMDLMVEASPRRIF--ANAHTYHINSISINS-DYETYLSA-DDLRINLWHLEITDRSFNIV---------------DIK 218 (447)
T ss_dssp EEEEEEEEEEEEEEE--CSCCSSCCCEEEECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEE---------------ECC
T ss_pred cchheeeeccceEEe--ccCCCcceEEEEEcC-CCCEEEEe-CCCeEEEEECCCCCceeeee---------------ecc
Confidence 11 137999999999999 99999998 79999999999522111000 000
Q ss_pred eeeeecCCCceEEEEEe--C-cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCC------------CeEEEEE
Q 016185 258 VFIASVHSNYVDCNRWL--G-DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC------------DIWFIKF 322 (394)
Q Consensus 258 ~~~~~~~~~~i~~~~~~--~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~------------~i~~~~~ 322 (394)
...+..|...|.+++|+ + +++++++.||.|++||+++++... ..+..+..|.. .|.+++|
T Consensus 219 ~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (447)
T 3dw8_B 219 PANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD-----RHSKLFEEPEDPSNRSFFSEIISSISDVKF 293 (447)
T ss_dssp CSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC-----TTCEEECCC-----CCHHHHHTTCEEEEEE
T ss_pred cccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc-----ceeeEeccCCCccccccccccCceEEEEEE
Confidence 01356899999999998 4 799999999999999999876210 01344555554 8999999
Q ss_pred eecCCcceEEEEeCCCcEEEEEecC-CCceeeEEeccCCccCC---------------eeEEEeccCCCEEEEeccCCeE
Q 016185 323 SCDFHYNAAAIGNREGKIFVWELQS-SPPVLIARLSHAQSKSP---------------IRQTAMSYDGSTILSCCEDGAI 386 (394)
Q Consensus 323 ~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~---------------v~~~~~s~~~~~l~s~~~dg~i 386 (394)
+|++ .+|++++. +.|++||+.. ++ .+..+. +|... +..++|+|++++|++|+.||.|
T Consensus 294 s~~g--~~l~~~~~-~~v~iwd~~~~~~--~~~~~~--~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v 366 (447)
T 3dw8_B 294 SHSG--RYMMTRDY-LSVKVWDLNMENR--PVETYQ--VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFF 366 (447)
T ss_dssp CTTS--SEEEEEES-SEEEEEETTCCSS--CSCCEE--SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEE
T ss_pred CCCC--CEEEEeeC-CeEEEEeCCCCcc--ccceee--ccccccccccccccccccccceEEEECCCCCEEEEeccCCEE
Confidence 9999 68999998 9999999987 43 444555 44321 3349999999999999999999
Q ss_pred EEEEcCC
Q 016185 387 WRWDAIP 393 (394)
Q Consensus 387 ~iwd~~~ 393 (394)
++||+.+
T Consensus 367 ~iwd~~~ 373 (447)
T 3dw8_B 367 RMFDRNT 373 (447)
T ss_dssp EEEETTT
T ss_pred EEEEcCC
Confidence 9999864
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.6e-35 Score=260.78 Aligned_cols=268 Identities=18% Similarity=0.316 Sum_probs=222.0
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
..++|+.++.+.+.. ....+....+.+|.+.|++++|. +++|++|+.|+ |++||+.+++.+..+. .
T Consensus 145 ~l~~g~~dg~i~iwd--~~~~~~~~~~~~h~~~v~~l~~~------~~~l~sg~~dg~i~vwd~~~~~~~~~~~-----~ 211 (435)
T 1p22_A 145 KIVSGLRDNTIKIWD--KNTLECKRILTGHTGSVLCLQYD------ERVIITGSSDSTVRVWDVNTGEMLNTLI-----H 211 (435)
T ss_dssp EEEEEESSSCEEEEE--SSSCCEEEEECCCSSCEEEEECC------SSEEEEEETTSCEEEEESSSCCEEEEEC-----C
T ss_pred EEEEEeCCCeEEEEe--CCCCeEEEEEcCCCCcEEEEEEC------CCEEEEEcCCCeEEEEECCCCcEEEEEc-----C
Confidence 356677777766664 34456677889999999999983 57999999998 9999999999888877 6
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeE---EEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccc
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLH---KSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~ 158 (394)
|...|.+++|. +. ++++|+.||.|++||+.+++.. ..+.+|...|.+++| ++.++++++.
T Consensus 212 h~~~v~~l~~~----~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~--------- 274 (435)
T 1p22_A 212 HCEAVLHLRFN----NG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASG--------- 274 (435)
T ss_dssp CCSCEEEEECC----TT-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEET---------
T ss_pred CCCcEEEEEEc----CC-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeC---------
Confidence 78889888875 44 8999999999999999887654 667789999999999 3478999998
Q ss_pred eeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecc
Q 016185 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 159 ~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 238 (394)
||.|++||+++++.+..+. +|...|.++.++ +.++++|+.||.|++||+++
T Consensus 275 ----------------dg~i~vwd~~~~~~~~~~~---~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~------- 325 (435)
T 1p22_A 275 ----------------DRTIKVWNTSTCEFVRTLN---GHKRGIACLQYR---DRLVVSGSSDNTIRLWDIEC------- 325 (435)
T ss_dssp ----------------TSEEEEEETTTCCEEEEEE---CCSSCEEEEEEE---TTEEEEEETTSCEEEEETTT-------
T ss_pred ----------------CCeEEEEECCcCcEEEEEc---CCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCC-------
Confidence 9999999999999999998 899999999995 46899999999999999998
Q ss_pred ccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeE
Q 016185 239 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 318 (394)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~ 318 (394)
...+..+..|...|.+++|+++++++++.||.|++||+++.+..........+..+..|...|.
T Consensus 326 ----------------~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 389 (435)
T 1p22_A 326 ----------------GACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF 389 (435)
T ss_dssp ----------------CCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCC
T ss_pred ----------------CCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeE
Confidence 3457788899999999999999999999999999999987653222222224667788999999
Q ss_pred EEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 319 FIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
+++| ++ .+|++++.||.|++||+.+..
T Consensus 390 ~l~~--~~--~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 390 RLQF--DE--FQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp CEEE--CS--SCEEECCSSSEEEEEC-----
T ss_pred EEEe--CC--CEEEEEeCCCEEEEEECCCCC
Confidence 9999 55 579999999999999998874
No 101
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.8e-35 Score=258.80 Aligned_cols=320 Identities=16% Similarity=0.135 Sum_probs=201.7
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCc-------eeEEeeecccCCcccceEEEEEE--------------
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGG-------VIAALQSYVDEDKEESFYTVSWA-------------- 92 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~-------------- 92 (394)
...++++|........++++.|.++.|.+|+..... ....+... .+...+..+.|.
T Consensus 16 ~~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (393)
T 4gq1_A 16 VRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI---QTGLPTLHLSFSSSCSYSENLHDGDG 92 (393)
T ss_dssp CCEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE---ECSSCEEEEEECTTCEEECC------
T ss_pred CCCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEE---ecCCCeeeEeecCCccccccccCCCc
Confidence 345667775322224567777776669999764221 11111111 122333333332
Q ss_pred ----EcCCCCcEEEEeecCCeEEEEECCCCeeEE-----EEEecCCceeEEEEcC-------CCCcEEEEceeeeEEeec
Q 016185 93 ----CNVDGIPFLVAGGINGIIRVIDVSNEKLHK-----SFVGHGDSINEIRTQP-------LKPSLVVSASKVIIISSL 156 (394)
Q Consensus 93 ----~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-----~~~~~~~~v~~~~~~~-------~~~~~l~s~~~~i~~~~~ 156 (394)
+.+++. +|++++.|++|++||..+++... .+.+|.+.|.+++|+| .++++|++++.
T Consensus 93 ~~~~~~~~~~-~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~------- 164 (393)
T 4gq1_A 93 NVNSSPVYSL-FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD------- 164 (393)
T ss_dssp ----CCEEEE-EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET-------
T ss_pred ceeecCCCCC-EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC-------
Confidence 113445 89999999999999998876543 3458999999999986 25689999999
Q ss_pred cceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceee
Q 016185 157 SLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYV 236 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 236 (394)
|++|+|||++++.....+. .|..++.+++|+|.+..+|++++.|++|++||+++++...
T Consensus 165 ------------------D~tv~~Wd~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 165 ------------------DCTLIIWRLTDEGPILAGY---PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp ------------------TSEEEEEEEETTEEEEEEE---ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---
T ss_pred ------------------CCeEEEEECCCCceeeeec---CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc
Confidence 9999999999888777766 6899999999999444689999999999999999865432
Q ss_pred ccccccCCCCCCCC--ccccccceeeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCc--------
Q 016185 237 EKSFTWTDLPSKFP--TKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGT-------- 303 (394)
Q Consensus 237 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------- 303 (394)
.............. ............+|...+.++.|. ++.+++++.|+.+++||+...+.......
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPK 303 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------
T ss_pred cccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccE
Confidence 22111110000000 000011122446788899999986 78999999999999999987653111000
Q ss_pred --ceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEec
Q 016185 304 --ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC 381 (394)
Q Consensus 304 --~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 381 (394)
.........+.. .....++|.....++++|+.||.|++||+.+++. ...+. +|..+|.+++|+|||++||+++
T Consensus 304 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~--~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 304 NLLPNVQGISLFPS-LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPI--QLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp CCSCSEEEECSSCC-SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEE--ECSSCEEEEEECTTSSEEEEEE
T ss_pred EEccccccccccCc-ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEec--CCCCcEEEEEEcCCCCEEEEEe
Confidence 000001111111 2223445544335788899999999999998853 34444 6678999999999999999998
Q ss_pred cCCeEEEEEc
Q 016185 382 EDGAIWRWDA 391 (394)
Q Consensus 382 ~dg~i~iwd~ 391 (394)
.|| +.+|.+
T Consensus 379 ~~G-v~lvrL 387 (393)
T 4gq1_A 379 EGS-VLLTRL 387 (393)
T ss_dssp SSE-EEEEEE
T ss_pred CCC-eEEEEE
Confidence 765 556554
No 102
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=247.88 Aligned_cols=252 Identities=17% Similarity=0.252 Sum_probs=216.7
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
+|...|.+++|+ |+++ +|++++.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.
T Consensus 30 ~h~~~v~~~~~s--~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~----------- 94 (369)
T 3zwl_B 30 GHERPLTQVKYN--KEGD-LLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSA----------- 94 (369)
T ss_dssp CCSSCEEEEEEC--TTSC-EEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEET-----------
T ss_pred EeeceEEEEEEc--CCCC-EEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeC-----------
Confidence 789999999998 9999 999999999999999999999999999999999999999 7889999999
Q ss_pred eeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC-----CcEEEEEcccccee
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTY 235 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~ 235 (394)
|+.|++||+++++.+..+. +...|.+++|+| ++.++++++.+ +.|++||+......
T Consensus 95 --------------dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 95 --------------DYSIKLWDVSNGQCVATWK----SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp --------------TTEEEEEETTTCCEEEEEE----CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred --------------CCeEEEEECCCCcEEEEee----cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 9999999999999998887 888999999999 99999999998 99999999884321
Q ss_pred eccccccCCCCCCCCccccccceeeeecCCC--ceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccccc
Q 016185 236 VEKSFTWTDLPSKFPTKYVQFPVFIASVHSN--YVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
... ......+...+..|.. .+.+++|+ ++++++++.||.|++||+++... .+..+.
T Consensus 156 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~ 215 (369)
T 3zwl_B 156 HEL------------TKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYE--------YVDSID 215 (369)
T ss_dssp CCE------------EEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTE--------EEEEEE
T ss_pred eee------------cccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcE--------eEEEEe
Confidence 110 0011224555666776 89999998 77999999999999999987321 567778
Q ss_pred CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCC-------
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG------- 384 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg------- 384 (394)
.|...|.+++|+|++ .+|++++.|+.|++||+.+++ ....+. +...+..++|+|+++++++++.++
T Consensus 216 ~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~--~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 288 (369)
T 3zwl_B 216 LHEKSISDMQFSPDL--TYFITSSRDTNSFLVDVSTLQ--VLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTTT 288 (369)
T ss_dssp CCSSCEEEEEECTTS--SEEEEEETTSEEEEEETTTCC--EEEEEE---CSSCEEEEEECSSSSEEEEEECCC-------
T ss_pred cCCCceeEEEECCCC--CEEEEecCCceEEEEECCCCc--eeeeec---CCCCceeEEecCCCceEEEeecCCCceEEEE
Confidence 889999999999999 689999999999999999875 444444 447899999999999999999988
Q ss_pred -------eEEEEEcCC
Q 016185 385 -------AIWRWDAIP 393 (394)
Q Consensus 385 -------~i~iwd~~~ 393 (394)
.+++||+.+
T Consensus 289 ~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 289 SANEGKFEARFYHKIF 304 (369)
T ss_dssp ------CEEEEEETTT
T ss_pred ecCCCcceeEEEecCC
Confidence 899999864
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=241.84 Aligned_cols=264 Identities=16% Similarity=0.250 Sum_probs=223.0
Q ss_pred eeeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc---eeEEeeecc
Q 016185 3 RTAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG---VIAALQSYV 78 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~---~~~~~~~~~ 78 (394)
..++|+.++...+... ...+....+..|...|++++|+| ++++|++++.|+ |++|++.... .+..+.
T Consensus 31 ~l~s~~~dg~v~vw~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~--- 101 (313)
T 3odt_A 31 KVASVSRDGTVRLWSK--DDQWLGTVVYTGQGFLNSVCYDS----EKELLLFGGKDTMINGVPLFATSGEDPLYTLI--- 101 (313)
T ss_dssp EEEEEETTSEEEEEEE--SSSEEEEEEEECSSCEEEEEEET----TTTEEEEEETTSCEEEEETTCCTTSCC-CEEC---
T ss_pred EEEEEEcCCcEEEEEC--CCCEEEEEeecCCccEEEEEECC----CCCEEEEecCCCeEEEEEeeecCCCCcccchh---
Confidence 4567777777666654 44556667788999999999999 789999999998 9999987653 334443
Q ss_pred cCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccc
Q 016185 79 DEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158 (394)
Q Consensus 79 ~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~ 158 (394)
.|...|.+++|. ++ ++++++.||.|++|| .++....+..|...+.+++|.|.++.++++++.
T Consensus 102 --~~~~~i~~~~~~----~~-~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--------- 163 (313)
T 3odt_A 102 --GHQGNVCSLSFQ----DG-VVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA--------- 163 (313)
T ss_dssp --CCSSCEEEEEEE----TT-EEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET---------
T ss_pred --hcccCEEEEEec----CC-EEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC---------
Confidence 688899988873 55 899999999999999 678888999999999999999867789999999
Q ss_pred eeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecc
Q 016185 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 159 ~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 238 (394)
|+.|++|| .++....+.. .|...|.+++|+| ++. +++++.||.|++||+++
T Consensus 164 ----------------d~~i~i~d--~~~~~~~~~~--~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~------- 214 (313)
T 3odt_A 164 ----------------DKTIKLWQ--NDKVIKTFSG--IHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHT------- 214 (313)
T ss_dssp ----------------TSCEEEEE--TTEEEEEECS--SCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTT-------
T ss_pred ----------------CCCEEEEe--cCceEEEEec--cCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCc-------
Confidence 99999999 4566666661 3899999999999 877 99999999999999998
Q ss_pred ccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCe
Q 016185 239 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 317 (394)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i 317 (394)
..++..+..|...|.+++|+ ...+++++.||.|++||+++++ .+..+..|...|
T Consensus 215 ----------------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~---------~~~~~~~~~~~i 269 (313)
T 3odt_A 215 ----------------GDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGS---------LKQVITLPAISI 269 (313)
T ss_dssp ----------------CCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCC---------EEEEEECSSSCE
T ss_pred ----------------hhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCc---------eeEEEeccCceE
Confidence 34577788999999999998 3379999999999999999876 667778888899
Q ss_pred EEEEEeecCCcceEEEEeCCCcEEEEEecCCCc
Q 016185 318 WFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP 350 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 350 (394)
.+++|+|++ . +++++.||.|++||+.+++.
T Consensus 270 ~~~~~~~~~--~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 270 WSVDCMSNG--D-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEEEECTTS--C-EEEEETTSCEEEEESCGGGC
T ss_pred EEEEEccCC--C-EEEEeCCCcEEEEeCCCCce
Confidence 999999999 3 67799999999999998754
No 104
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-34 Score=257.57 Aligned_cols=308 Identities=11% Similarity=0.071 Sum_probs=220.9
Q ss_pred eeeecCCCceeeeecccc---cc-cceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcC---CCceeEEe
Q 016185 3 RTAIGCEPLVGSLTPSKK---RE-YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCL---EGGVIAAL 74 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~---~~-~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~---~~~~~~~~ 74 (394)
..++|+.++.+.+..... .. ++....+ +|..+|++++|+| ++++|++++.|+ |++||+. +++.+...
T Consensus 78 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~----~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 152 (437)
T 3gre_A 78 YLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIP----NFDAFAVSSKDGQIIVLKVNHYQQESEVKFL 152 (437)
T ss_dssp EEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECT----TSSEEEEEETTSEEEEEEEEEEEETTEEEEE
T ss_pred EEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeC----CCCEEEEEeCCCEEEEEEeccccCCceeecc
Confidence 466777888777765433 21 2223222 5999999999998 789999999998 9999984 55444433
Q ss_pred eecc-------cCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEe--cCCceeEEEEcCCCCcEEE
Q 016185 75 QSYV-------DEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG--HGDSINEIRTQPLKPSLVV 145 (394)
Q Consensus 75 ~~~~-------~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~ 145 (394)
..+. +..+...+.++.+.+++++. +|++|+.||.|++||+.+++++..+.+ |...|.+++|+| ++.+|+
T Consensus 153 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~ 230 (437)
T 3gre_A 153 NCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE-ECCVLI 230 (437)
T ss_dssp EEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT-TSCEEE
T ss_pred ccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC-CCCEEE
Confidence 3211 11156778888877778998 999999999999999999999999998 899999999999 789999
Q ss_pred EceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecC---CCCeeEEeeccCC
Q 016185 146 SASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP---SDIYRIASCGMDN 222 (394)
Q Consensus 146 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~l~s~~~dg 222 (394)
+++. ||.|++||+++++.+..+.. .|..+|.+++|+| .++.+|++++.||
T Consensus 231 s~~~-------------------------dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 231 LGTT-------------------------RGIIDIWDIRFNVLIRSWSF--GDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp EEET-------------------------TSCEEEEETTTTEEEEEEBC--TTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred EEcC-------------------------CCeEEEEEcCCccEEEEEec--CCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 9999 99999999999998888752 4778999996654 1688999999999
Q ss_pred cEEEEEccccceeeccccccCCCC-CCCCccccccceeeeec--CCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCC
Q 016185 223 TVKIWSMKEFWTYVEKSFTWTDLP-SKFPTKYVQFPVFIASV--HSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQS 298 (394)
Q Consensus 223 ~v~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~ 298 (394)
.|++||+++++............. ..+...........+.+ |...|.+++|+ ++++++++.|+.|++||+.+++..
T Consensus 284 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccc
Confidence 999999998553222110000000 00000000000112333 88889999998 679999999999999999987632
Q ss_pred CCCC----------------------------cceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEE
Q 016185 299 PGEG----------------------------TADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWE 344 (394)
Q Consensus 299 ~~~~----------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd 344 (394)
.... ..........|...|++++|+++....+|++|+.||.|++|+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 364 KAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 1100 000011123388899999999993337999999999999995
No 105
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=255.47 Aligned_cols=318 Identities=14% Similarity=0.170 Sum_probs=214.0
Q ss_pred eeecCCCceeeeecccccccceeeee-----------ccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCcee
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKL-----------QEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVI 71 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~-----------~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~ 71 (394)
.++|+.++...+.............. .+|...|++++|+|. ++.+|++++.|+ |++||+.+++..
T Consensus 59 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~s~~~d~~i~iwd~~~~~~~ 135 (408)
T 4a11_B 59 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH---DTGMFTSSSFDKTLKVWDTNTLQTA 135 (408)
T ss_dssp EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT---CTTCEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC---CCcEEEEEeCCCeEEEeeCCCCccc
Confidence 56777777777765544332222111 359999999999983 467899999888 999999998877
Q ss_pred EEeeecccCCcccceEEEEEEEcC-CCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceee
Q 016185 72 AALQSYVDEDKEESFYTVSWACNV-DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKV 150 (394)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~ 150 (394)
..+. +...+.++++.+.. ++. ++++++.||.|++||+.+++.+..+..|...|.+++|+|++..++++++.
T Consensus 136 ~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~- 207 (408)
T 4a11_B 136 DVFN------FEETVYSHHMSPVSTKHC-LVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA- 207 (408)
T ss_dssp EEEE------CSSCEEEEEECSSCSSCC-EEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET-
T ss_pred eecc------CCCceeeeEeecCCCCCc-EEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC-
Confidence 7665 45678888887332 455 99999999999999999999999999999999999999955557999999
Q ss_pred eEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc-EEEEeec------------cCCCcccEEEEEecCCCCeeEEe
Q 016185 151 IIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI-CILIFAG------------AGGHRNEVLSVDFHPSDIYRIAS 217 (394)
Q Consensus 151 i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~~------------~~~~~~~i~~~~~~~~~~~~l~s 217 (394)
||.|++||++++. ....+.. ...|...|.+++|+| ++.+|++
T Consensus 208 ------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 262 (408)
T 4a11_B 208 ------------------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLT 262 (408)
T ss_dssp ------------------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEE
T ss_pred ------------------------CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEE
Confidence 9999999998765 3333310 126889999999999 9999999
Q ss_pred eccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCC
Q 016185 218 CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKE 296 (394)
Q Consensus 218 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~ 296 (394)
++.||.|++||+++++........ . ............... +..+++++.++.|++||+.+++
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 325 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGK----------------V-CNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE 325 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCC----------------C-CCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC
T ss_pred ecCCCeEEEEECCCCccceecccc----------------c-cccccccceeEEecCCCceEEEEecCCEEEEEECcCCc
Confidence 999999999999985431110000 0 000000111111111 5677777889999999999876
Q ss_pred CCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEecc-CCC
Q 016185 297 QSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY-DGS 375 (394)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~ 375 (394)
.+..+..|...|++++|+|++ .+|++++.||.|++||+.+.++ +.... .+ -....+.+ ...
T Consensus 326 ---------~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~i~iw~~~~~~~--~~~~~--~~---~~~~~~~~~~~~ 387 (408)
T 4a11_B 326 ---------QITMLKGHYKTVDCCVFQSNF--QELYSGSRDCNILAWVPSLYEP--VPDDD--ET---TTKSQLNPAFED 387 (408)
T ss_dssp ---------EEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEEEEEECC-----------------------------
T ss_pred ---------ceeeeccCCCeEEEEEEcCCC--CEEEEECCCCeEEEEeCCCCCc--cCCCC--ce---Eeccccccccce
Confidence 677888999999999999999 6899999999999999998753 22222 11 11123333 344
Q ss_pred EEEEeccCCeEEEEEcC
Q 016185 376 TILSCCEDGAIWRWDAI 392 (394)
Q Consensus 376 ~l~s~~~dg~i~iwd~~ 392 (394)
.+.+++.|+.+++|+..
T Consensus 388 ~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 388 AWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp -----------------
T ss_pred eecccCccCceeecCCc
Confidence 56677789999999864
No 106
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.6e-33 Score=252.18 Aligned_cols=293 Identities=13% Similarity=0.024 Sum_probs=230.9
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcE
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPF 100 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 100 (394)
.++....+..+ ..+.+++|+| ++.++++++.++ |++||+.+++....+.......|...+.+++|. +++. +
T Consensus 112 ~~~~~~~~~~~-~~~~~~~~s~----~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~--~~~~-~ 183 (433)
T 3bws_A 112 THRFISRFKTG-FQPKSVRFID----NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP--EHNE-L 183 (433)
T ss_dssp SEEEEEEEECS-SCBCCCEESS----SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG--GGTE-E
T ss_pred cceEEEEEcCC-CCceEEEEeC----CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc--CCCE-E
Confidence 33455555544 4566999998 678899988887 999999998877654432223678889999886 8888 9
Q ss_pred EEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEE
Q 016185 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRL 180 (394)
Q Consensus 101 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~v 180 (394)
+++++.|+.|++||+.+++.+..+..|...+.+++|+|++..++++++. |+.|++
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------~~~i~~ 238 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI-------------------------SEDISV 238 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT-------------------------TTEEEE
T ss_pred EEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-------------------------CCcEEE
Confidence 9999999999999999999999999999999999999954445567667 999999
Q ss_pred EEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeec--------cCCcEEEEEccccceeeccccccCCCCCCCCcc
Q 016185 181 WNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG--------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 252 (394)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~--------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 252 (394)
||+++++.+..+. +...+.+++|+| ++..+++++ .||.|++||+++++
T Consensus 239 ~d~~~~~~~~~~~----~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~------------------- 294 (433)
T 3bws_A 239 IDRKTKLEIRKTD----KIGLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEK------------------- 294 (433)
T ss_dssp EETTTTEEEEECC----CCSEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTE-------------------
T ss_pred EECCCCcEEEEec----CCCCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCc-------------------
Confidence 9999998888776 456699999999 888888887 48899999998843
Q ss_pred ccccceeeeecCCCceEEEEEe--Cc-EEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcc
Q 016185 253 YVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN 329 (394)
Q Consensus 253 ~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 329 (394)
.+. ...|...+.+++|+ ++ ++++++.|+.|++||+.+++ .+..+. +...+.+++|+|++ .
T Consensus 295 ----~~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~---------~~~~~~-~~~~~~~~~~s~dg--~ 357 (433)
T 3bws_A 295 ----LID-TIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK---------VQKSIP-VFDKPNTIALSPDG--K 357 (433)
T ss_dssp ----EEE-EEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE---------EEEEEE-CSSSEEEEEECTTS--S
T ss_pred ----EEe-eccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc---------EEEEec-CCCCCCeEEEcCCC--C
Confidence 122 22455678888887 54 55677899999999998765 333333 45678999999999 5
Q ss_pred eEEEEeC---------------CCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEecc-CCeEEEEEcCC
Q 016185 330 AAAIGNR---------------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE-DGAIWRWDAIP 393 (394)
Q Consensus 330 ~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~ 393 (394)
++++++. ||.|++||+.+++ .+..+. . ...+.+++|+|++++|++++. |+.|++|+++.
T Consensus 358 ~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~--~~~~~~--~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 358 YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT--VKEFWE--A-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE--EEEEEE--C-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEEEecCCCccccccccccccceEEEEEECCCCc--EEEEec--C-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 6777665 5799999998874 455555 2 357899999999999988764 99999999874
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.8e-34 Score=256.50 Aligned_cols=259 Identities=16% Similarity=0.252 Sum_probs=214.2
Q ss_pred eeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCC----------CceeEEeeecccCCcccceEEEEEEEcCC
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLE----------GGVIAALQSYVDEDKEESFYTVSWACNVD 96 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~----------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 96 (394)
....|.+.|++++|+|+ ++.+||+++.++ |++|++.+ ...+..+. .|...+++++|+ |+
T Consensus 123 ~~~~h~~~v~~l~~~p~---~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~l~~~--~~ 192 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQ---NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-----GHQKEGYGLSWN--PN 192 (430)
T ss_dssp EEEEESSCCSEEEEETT---EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-----CCSSCCCCEEEC--TT
T ss_pred EEEcCCCcEEEEEECCC---CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-----CCCCCeEEEEeC--CC
Confidence 44679999999999992 378999999988 99999986 44555555 678899999998 77
Q ss_pred CCcEEEEeecCCeEEEEECCCCee-------EEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccce
Q 016185 97 GIPFLVAGGINGIIRVIDVSNEKL-------HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNC 169 (394)
Q Consensus 97 ~~~~l~s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~ 169 (394)
+..+|++|+.||.|++||+.++.. ...+.+|...|.+++|+|.++.+|++++.
T Consensus 193 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-------------------- 252 (430)
T 2xyi_A 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD-------------------- 252 (430)
T ss_dssp STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET--------------------
T ss_pred CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC--------------------
Confidence 766899999999999999987321 45677899999999999977889999999
Q ss_pred eeeccCCcEEEEEecCC---cEEEEeeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccccceeeccccccCCC
Q 016185 170 LRVGQDESVRLWNVQTG---ICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 245 (394)
Q Consensus 170 ~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 245 (394)
|+.|++||++++ +....+. .|...|++++|+| ++. +|++|+.||.|++||++..
T Consensus 253 -----dg~i~i~d~~~~~~~~~~~~~~---~~~~~v~~i~~~p-~~~~~l~tg~~dg~v~vwd~~~~------------- 310 (430)
T 2xyi_A 253 -----DQKLMIWDTRNNNTSKPSHTVD---AHTAEVNCLSFNP-YSEFILATGSADKTVALWDLRNL------------- 310 (430)
T ss_dssp -----TSEEEEEETTCSCSSSCSEEEE---CCSSCEEEEEECS-SCTTEEEEEETTSEEEEEETTCT-------------
T ss_pred -----CCeEEEEECCCCCCCcceeEee---cCCCCeEEEEeCC-CCCCEEEEEeCCCeEEEEeCCCC-------------
Confidence 999999999987 4666666 7999999999999 655 7899999999999999973
Q ss_pred CCCCCccccccceeeeecCCCceEEEEEe--C-cEEEEeecCCeEEEecCCCCCCCCC-----CCcceecccccCCCCCe
Q 016185 246 PSKFPTKYVQFPVFIASVHSNYVDCNRWL--G-DFILSKSVDNEIVLWEPKMKEQSPG-----EGTADILQKYPVPECDI 317 (394)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~dg~i~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~~i 317 (394)
..++..+..|...|.++.|+ + .++++++.|+.|++||+........ .+....+..+.+|...|
T Consensus 311 ---------~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 381 (430)
T 2xyi_A 311 ---------KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKI 381 (430)
T ss_dssp ---------TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCE
T ss_pred ---------CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCc
Confidence 23567788899999999998 4 4799999999999999987432110 01123567778889999
Q ss_pred EEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 318 WFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
++++|+|+++ .++++++.||.|++|++...
T Consensus 382 ~~~~~~p~~~-~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 382 SDFSWNPNEP-WIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEECSSST-TEEEEEETTSEEEEEEECHH
T ss_pred eEEEECCCCC-CEEEEEECCCCEEEeEcccc
Confidence 9999999994 28999999999999999754
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=5.9e-34 Score=246.89 Aligned_cols=252 Identities=6% Similarity=0.002 Sum_probs=203.5
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCe---eEEEEEecCCceeEEEEcCCCCc-EEEEceeeeEEeec
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---LHKSFVGHGDSINEIRTQPLKPS-LVVSASKVIIISSL 156 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~~i~~~~~ 156 (394)
.|.+.|.+++|+ |+++ +|++++.||.|++||+.+++ ....+..|...|.+++|+| ++. +|++++.
T Consensus 9 ~h~~~v~~~~~s--~~~~-~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~------- 77 (342)
T 1yfq_A 9 APKDYISDIKII--PSKS-LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTV------- 77 (342)
T ss_dssp CCSSCEEEEEEE--GGGT-EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEET-------
T ss_pred CCCCcEEEEEEc--CCCC-EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcC-------
Confidence 688999999999 8898 99999999999999998776 3555668999999999999 678 8999999
Q ss_pred cceeeeeeeccceeeeccCCcEEEEEe-cCCcEEEEeeccCC--CcccEEEEEecCCCCeeEEeeccCCcEEEEEccccc
Q 016185 157 SLICLLLFIRSNCLRVGQDESVRLWNV-QTGICILIFAGAGG--HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~i~vwd~-~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
||.|++||+ .+++. ..+. + |...|.+++|+| +.+|++++.|+.|++||+++..
T Consensus 78 ------------------dg~i~~wd~~~~~~~-~~~~---~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 78 ------------------QGEILKVDLIGSPSF-QALT---NNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYG 133 (342)
T ss_dssp ------------------TSCEEEECSSSSSSE-EECB---SCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHT
T ss_pred ------------------CCeEEEEEeccCCce-Eecc---ccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccc
Confidence 999999999 77765 4555 7 999999999998 6789999999999999998611
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCC-CCCCCCCCcceecccccC
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKM-KEQSPGEGTADILQKYPV 312 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~ 312 (394)
.... .....++..+. |...|.+++|+++.+++++.|+.|++||+++ .... .......
T Consensus 134 ~~~~--------------~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-------~~~~~~~ 191 (342)
T 1yfq_A 134 DGVI--------------AVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN-------GTIEESG 191 (342)
T ss_dssp TBCE--------------EEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCC-------CEEEECS
T ss_pred cccc--------------cccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCcccccc-------ceeeecC
Confidence 0000 00011222333 7889999999977799999999999999987 4321 1223345
Q ss_pred CCCCeEEEEEee-cCCcceEEEEeCCCcEEEEEecCC--C--ceeeEEeccCCc---------cCCeeEEEeccCCCEEE
Q 016185 313 PECDIWFIKFSC-DFHYNAAAIGNREGKIFVWELQSS--P--PVLIARLSHAQS---------KSPIRQTAMSYDGSTIL 378 (394)
Q Consensus 313 ~~~~i~~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~--~--~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~ 378 (394)
+...+.+++|+| ++ .++++++.||.|++|++... . ......+. .| ...|.+++|+|++++|+
T Consensus 192 ~~~~i~~i~~~~~~~--~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 267 (342)
T 1yfq_A 192 LKYQIRDVALLPKEQ--EGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR--CHRLNLKDTNLAYPVNSIEFSPRHKFLY 267 (342)
T ss_dssp CSSCEEEEEECSGGG--CEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE--CCCCCTTCCSSCCCEEEEEECTTTCCEE
T ss_pred CCCceeEEEECCCCC--CEEEEEecCCcEEEEEEcCCCcccccccceeee--cccccccccccceeEEEEEEcCCCCEEE
Confidence 677899999999 88 68999999999999999876 1 12344555 44 44999999999999999
Q ss_pred EeccCCeEEEEEcCC
Q 016185 379 SCCEDGAIWRWDAIP 393 (394)
Q Consensus 379 s~~~dg~i~iwd~~~ 393 (394)
+++.||.|++||+.+
T Consensus 268 ~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 268 TAGSDGIISCWNLQT 282 (342)
T ss_dssp EEETTSCEEEEETTT
T ss_pred EecCCceEEEEcCcc
Confidence 999999999999874
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=245.85 Aligned_cols=246 Identities=17% Similarity=0.271 Sum_probs=202.1
Q ss_pred CcccceEEEEEEEcCC---CCcEEEEeecCCeEEEEECCC-CeeE-EEEEecCCceeEEEEcCCCCcEEEEceeeeEEee
Q 016185 81 DKEESFYTVSWACNVD---GIPFLVAGGINGIIRVIDVSN-EKLH-KSFVGHGDSINEIRTQPLKPSLVVSASKVIIISS 155 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~---~~~~l~s~~~dg~i~vwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~ 155 (394)
.|.+.|.+++|+ |+ |+ +|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+| ++.+|++++.
T Consensus 37 ~h~~~v~~~~~~--~~~~~g~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~------ 106 (368)
T 3mmy_A 37 SPDDSIGCLSFS--PPTLPGN-FLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASC------ 106 (368)
T ss_dssp CCSSCEEEEEEC--CTTSSSE-EEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEET------
T ss_pred CCCCceEEEEEc--CCCCCce-EEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcC------
Confidence 789999999998 87 57 999999999999999987 5444 78889999999999999 8889999999
Q ss_pred ccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEe--cCCCCeeEEeeccCCcEEEEEccccc
Q 016185 156 LSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF--HPSDIYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
||.|++||+++++..... .|...|.+++| +| ++.+|++++.||.|++||+++.
T Consensus 107 -------------------dg~v~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~- 161 (368)
T 3mmy_A 107 -------------------DKTAKMWDLSSNQAIQIA----QHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSS- 161 (368)
T ss_dssp -------------------TSEEEEEETTTTEEEEEE----ECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCS-
T ss_pred -------------------CCcEEEEEcCCCCceeec----cccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCC-
Confidence 999999999999887755 49999999999 88 8899999999999999999983
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP 313 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 313 (394)
.++..+..+. .+.++.+.+..+++++.++.+++|+++.... . ........
T Consensus 162 ----------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~--~~~~~~~~ 211 (368)
T 3mmy_A 162 ----------------------NPMMVLQLPE-RCYCADVIYPMAVVATAERGLIVYQLENQPS-----E--FRRIESPL 211 (368)
T ss_dssp ----------------------SCSEEEECSS-CEEEEEEETTEEEEEEGGGCEEEEECSSSCE-----E--EEECCCSC
T ss_pred ----------------------cEEEEEecCC-CceEEEecCCeeEEEeCCCcEEEEEeccccc-----h--hhhccccc
Confidence 3455555543 6778888888999999999999999987642 1 11122233
Q ss_pred CCCeEEEEEeecCC--cceEEEEeCCCcEEEEEecCCCc-eeeEEeccCCccC------------CeeEEEeccCCCEEE
Q 016185 314 ECDIWFIKFSCDFH--YNAAAIGNREGKIFVWELQSSPP-VLIARLSHAQSKS------------PIRQTAMSYDGSTIL 378 (394)
Q Consensus 314 ~~~i~~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~------------~v~~~~~s~~~~~l~ 378 (394)
...+.++.+.++.. ...+++++.||.|++||+..... .....+. .|.. .|++++|+|++++|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 289 (368)
T 3mmy_A 212 KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK--CHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA 289 (368)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE--CSEEC----CCCEEECCEEEEEECTTTCCEE
T ss_pred cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee--eeecccccccccccccceEEEEEecCCCEEE
Confidence 44567777777663 13399999999999999988743 3445555 5544 799999999999999
Q ss_pred EeccCCeEEEEEcCC
Q 016185 379 SCCEDGAIWRWDAIP 393 (394)
Q Consensus 379 s~~~dg~i~iwd~~~ 393 (394)
+++.||.|++||+.+
T Consensus 290 s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 290 TVGSDGRFSFWDKDA 304 (368)
T ss_dssp EEETTSCEEEEETTT
T ss_pred EEccCCeEEEEECCC
Confidence 999999999999875
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5.6e-34 Score=248.57 Aligned_cols=252 Identities=14% Similarity=0.105 Sum_probs=196.9
Q ss_pred eeccCccceeEEEEEeeCCCcceEEEEe-----------cCCc-EEEEEcCCCce-eEE---eeecccCCcccceEEEEE
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFNVFATV-----------GGNR-VTVYQCLEGGV-IAA---LQSYVDEDKEESFYTVSW 91 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~~las~-----------~~d~-i~vw~~~~~~~-~~~---~~~~~~~~~~~~v~~~~~ 91 (394)
.|.+|.+.|+++++++ +.++++ +.|+ +++|++.+... +.. .+......++..+.+++|
T Consensus 68 ~l~~~~~~v~s~~~~~------~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f 141 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK------GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI 141 (365)
T ss_dssp ECCTTSCCCCEEEEET------TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE
T ss_pred EccCCCCceEEEEeCC------CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE
Confidence 4578899999998764 445544 3455 99999876542 222 222222234556777877
Q ss_pred EEcCCCCcEEE--EeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccce
Q 016185 92 ACNVDGIPFLV--AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNC 169 (394)
Q Consensus 92 ~~~~~~~~~l~--s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~ 169 (394)
+ |||+ +++ +++.|++|+|||+++++++..+. |...|.+++|+| ++.++++++
T Consensus 142 S--pDg~-~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s--------------------- 195 (365)
T 4h5i_A 142 S--REGT-VAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYIT--------------------- 195 (365)
T ss_dssp C--TTSS-CEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEEC---------------------
T ss_pred c--CCCC-EEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEecc---------------------
Confidence 7 9999 655 55679999999999999998886 778899999999 889999988
Q ss_pred eeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCC----cEEEEEccccceeeccccccCCC
Q 016185 170 LRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN----TVKIWSMKEFWTYVEKSFTWTDL 245 (394)
Q Consensus 170 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg----~v~iwd~~~~~~~~~~~~~~~~~ 245 (394)
++.+++|+..+++...... ...|...|.+++|+| ++.++++++.|+ .+++|++......
T Consensus 196 -----~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~v~fsp-dg~~l~~~s~d~~~~~~i~~~~~~~~~~~---------- 258 (365)
T 4h5i_A 196 -----GSSLEVISTVTGSCIARKT-DFDKNWSLSKINFIA-DDTVLIAASLKKGKGIVLTKISIKSGNTS---------- 258 (365)
T ss_dssp -----SSCEEEEETTTCCEEEEEC-CCCTTEEEEEEEEEE-TTEEEEEEEESSSCCEEEEEEEEETTEEE----------
T ss_pred -----ceeEEEEEeccCcceeeee-cCCCCCCEEEEEEcC-CCCEEEEEecCCcceeEEeecccccceec----------
Confidence 5567788877777654432 126889999999999 999999999887 6888888763321
Q ss_pred CCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccc-ccCCCCCeEEEEE
Q 016185 246 PSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK-YPVPECDIWFIKF 322 (394)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~ 322 (394)
......+..|...|.+++|+ |++|++|+.|+.|+|||+++++ .+.. +.+|...|++++|
T Consensus 259 ---------~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~---------~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 259 ---------VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS---------MSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp ---------EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE---------EEEEETTSSSSCEEEEEE
T ss_pred ---------ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc---------EEEEecCcccCCEEEEEE
Confidence 12245677899999999998 8899999999999999999876 5555 5789999999999
Q ss_pred eecCCcceEEEEeCCCcEEEEEecCC
Q 016185 323 SCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 323 ~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
+|++ .+|++|+.|++|+|||+..+
T Consensus 321 Spdg--~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 321 SPDS--TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CTTS--CEEEEEETTSEEEEEECCTT
T ss_pred CCCC--CEEEEEeCCCeEEEEEcCCC
Confidence 9999 69999999999999999654
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=9e-33 Score=236.91 Aligned_cols=267 Identities=15% Similarity=0.191 Sum_probs=211.9
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCc
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDK 82 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~ 82 (394)
+|+|. +..+.+.+...........+.+|...|++++|+| ++++||+|+.|+ |++||+.+++.+..+. .|
T Consensus 39 lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~----~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~-----~h 108 (318)
T 4ggc_A 39 LAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK----EGNYLAVGTSSAEVQLWDVQQQKRLRNMT-----SH 108 (318)
T ss_dssp EEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT----TSSEEEEEETTSEEEEEETTTTEEEEEEE-----CC
T ss_pred EEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC----CCCEEEEEECCCcEEEeecCCceeEEEec-----Cc
Confidence 45554 5566666544433333334467889999999999 799999999999 9999999999888887 56
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC-eeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE-KLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
...+.+++ +++. ++++++.++.+++|+.... ..+..+.+|...+..+.+.+ ++.++++++.
T Consensus 109 ~~~~~~~~----~~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~------------ 170 (318)
T 4ggc_A 109 SARVGSLS----WNSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGN------------ 170 (318)
T ss_dssp SSCEEEEE----EETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEET------------
T ss_pred cceEEEee----cCCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEec------------
Confidence 66665544 4466 9999999999999998765 55677889999999999999 7789999999
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcE----EEEeeccCCCcccEEEEEecCCCCeeE--EeeccCCcEEEEEcccccee
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGIC----ILIFAGAGGHRNEVLSVDFHPSDIYRI--ASCGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~l--~s~~~dg~v~iwd~~~~~~~ 235 (394)
|+.|++||+++++. ..... .+...|.+++++|.+...+ ++++.++.|++||.+...
T Consensus 171 -------------d~~i~iwd~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-- 232 (318)
T 4ggc_A 171 -------------DNLVNVWPSAPGEGGWVPLQTFT---QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-- 232 (318)
T ss_dssp -------------TSCEEEEESSCBTTBSCCSEEEC---CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC--
T ss_pred -------------CcceeEEECCCCcccccceeeec---ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc--
Confidence 99999999987653 22333 5888999999999444443 467789999999998832
Q ss_pred eccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEe--ecCCeEEEecCCCCCCCCCCCcceeccccc
Q 016185 236 VEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSK--SVDNEIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~--~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
......+...+..+.|. ++.++++ +.|+.|++||+++++ .+..+.
T Consensus 233 ----------------------~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---------~~~~l~ 281 (318)
T 4ggc_A 233 ----------------------CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---------KVAELK 281 (318)
T ss_dssp ----------------------EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---------EEEEEC
T ss_pred ----------------------ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc---------EEEEEc
Confidence 22334566778888887 5555544 479999999999876 678889
Q ss_pred CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
+|...|++++|+|++ .+|++|+.||+|+|||+.+..
T Consensus 282 gH~~~V~~l~~spdg--~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 282 GHTSRVLSLTMSPDG--ATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CCSSCEEEEEECTTS--SCEEEEETTTEEEEECCSCCC
T ss_pred CCCCCEEEEEEcCCC--CEEEEEecCCeEEEEECCCCC
Confidence 999999999999999 689999999999999997654
No 112
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=275.65 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=210.6
Q ss_pred eeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCC--CceeEEeeecccCCcccceEEEEEEEcCCCCcEEE
Q 016185 26 TNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLE--GGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLV 102 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 102 (394)
...+.+|.++|++++|+| ++++|++|+.|+ |+|||+.+ +..+..+. .|..+|.+++|+++.+++ +|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~----dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-----~h~~~V~~l~~s~~~~~~-~l~ 71 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDY----YGKRLATCSSDKTIKIFEVEGETHKLIDTLT-----GHEGPVWRVDWAHPKFGT-ILA 71 (753)
T ss_dssp ------CCCCEEEECCCS----SSCCEEEEETTTEEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECCTTSCS-EEE
T ss_pred eeecccCcceeEEEEECC----CCCeEEEEECCCcEEEEecCCCCCccceecc-----CCcCceEEEEecCCCCCC-EEE
Confidence 346789999999999999 789999999998 99999874 44455555 688999999998333388 999
Q ss_pred EeecCCeEEEEECCCCe--eEEEEEecCCceeEEEEcCCC-CcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEE
Q 016185 103 AGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLK-PSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVR 179 (394)
Q Consensus 103 s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 179 (394)
+|+.||.|++||+.+++ ....+.+|...|.+++|+|+. +.++++++. ||.|+
T Consensus 72 s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~-------------------------dg~I~ 126 (753)
T 3jro_A 72 SCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-------------------------DGKVS 126 (753)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------------------------TSEEE
T ss_pred EEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC-------------------------CCcEE
Confidence 99999999999999886 677788899999999999932 789999999 99999
Q ss_pred EEEecCCc--EEEEeeccCCCcccEEEEEecCC------------CCeeEEeeccCCcEEEEEccccceeeccccccCCC
Q 016185 180 LWNVQTGI--CILIFAGAGGHRNEVLSVDFHPS------------DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 245 (394)
Q Consensus 180 vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 245 (394)
+||++++. ....+. +|...|.+++|+|. ++.+|++|+.||.|++||+++...
T Consensus 127 vwdl~~~~~~~~~~~~---~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~----------- 192 (753)
T 3jro_A 127 VVEFKENGTTSPIIID---AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ----------- 192 (753)
T ss_dssp EEECCSSSCCCCEEEE---CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTT-----------
T ss_pred EEEeecCCCcceeEee---cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcc-----------
Confidence 99998873 333444 79999999999994 488999999999999999988321
Q ss_pred CCCCCccccccceeeeecCCCceEEEEEe-----CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEE
Q 016185 246 PSKFPTKYVQFPVFIASVHSNYVDCNRWL-----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 320 (394)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 320 (394)
.......+..|...|.+++|+ ++++++++.||.|++||+++++... .........+...|+++
T Consensus 193 --------~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~----~~~~~~~~~~~~~v~~l 260 (753)
T 3jro_A 193 --------TYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW----KKTLLKEEKFPDVLWRA 260 (753)
T ss_dssp --------EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC----BCCBSSSSCCSSCCCCE
T ss_pred --------cceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc----eeEEeccCCCCCceEEE
Confidence 013456778899999999997 5689999999999999999864211 11233445677889999
Q ss_pred EEeecCCcceEEEEeCCCcEEEEEecC
Q 016185 321 KFSCDFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 321 ~~~~~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
+|+|++ .++++++.||.|++|++..
T Consensus 261 ~~spdg--~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 261 SWSLSG--NVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EECTTT--CCEEEECSSSCEECCBCCS
T ss_pred EEcCCC--CEEEEEcCCCEEEEEecCC
Confidence 999999 6899999999999999874
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-34 Score=247.44 Aligned_cols=262 Identities=10% Similarity=0.084 Sum_probs=198.8
Q ss_pred cceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECC---------C
Q 016185 48 YFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS---------N 117 (394)
Q Consensus 48 ~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~---------~ 117 (394)
++.++++|+.|+ |++||+.+++.+..+. ...|..+.+. |+ +++++.|+.|++|+.. +
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-------~~~v~~~~~~--~~----~~s~s~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT-------TPNPRTGGEH--PA----IISRGPCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE-------EECCCTTCCC--CS----EEEECSTTEEEEEETTTEEEEEETTT
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe-------cCCceeeeeC--Cc----eEEecCCCeEEEEEccCceEEeecCC
Confidence 688999999999 9999999998877766 2345555555 44 8999999999999665 4
Q ss_pred CeeEEEEE-ecCCceeEEEEcCC-CCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeecc
Q 016185 118 EKLHKSFV-GHGDSINEIRTQPL-KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA 195 (394)
Q Consensus 118 ~~~~~~~~-~~~~~v~~~~~~~~-~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~ 195 (394)
++.+..+. +|..+|.+++|+|. ++.++++++. ||.|++||+++++.......
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~-------------------------dg~i~~wd~~~~~~~~~~~~- 167 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADN-------------------------RGTIGFQSYEDDSQYIVHSA- 167 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEET-------------------------TCCEEEEESSSSCEEEEECC-
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC-------------------------CCcEEEEECCCCcEEEEEec-
Confidence 45455554 67789999999992 3578999999 99999999999998766642
Q ss_pred CCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccce-eeeec-CCCceEEEEE
Q 016185 196 GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV-FIASV-HSNYVDCNRW 273 (394)
Q Consensus 196 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~ 273 (394)
.+...|.+++|+| ++.+|++|+.||.|++||+++++ .+ ..+.. |...|.+++|
T Consensus 168 -~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~-----------------------~~~~~~~~~h~~~v~~l~f 222 (343)
T 3lrv_A 168 -KSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPD-----------------------QASSRFPVDEEAKIKEVKF 222 (343)
T ss_dssp -CSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTT-----------------------SCCEECCCCTTSCEEEEEE
T ss_pred -CCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCC-----------------------CCccEEeccCCCCEEEEEE
Confidence 4566899999999 99999999999999999999843 23 45666 9999999999
Q ss_pred e--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCe--EEEEEeecCCcceEEEEeC-CCcEEEEEecCC
Q 016185 274 L--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI--WFIKFSCDFHYNAAAIGNR-EGKIFVWELQSS 348 (394)
Q Consensus 274 ~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~ 348 (394)
+ +.+|++++ |+.|++||+++.+... .+..+..+...+ .+++|+|++ .+|++++. |+.|++|++...
T Consensus 223 s~~g~~l~s~~-~~~v~iwd~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g--~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 223 ADNGYWMVVEC-DQTVVCFDLRKDVGTL------AYPTYTIPEFKTGTVTYDIDDSG--KNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CTTSSEEEEEE-SSBEEEEETTSSTTCB------SSCCCBC-----CCEEEEECTTS--SEEEEEETTTTEEEEEEECTT
T ss_pred eCCCCEEEEEe-CCeEEEEEcCCCCcce------eecccccccccccceEEEECCCC--CEEEEecCCCCcEEEEEEccc
Confidence 8 77999988 5599999999876311 122222233333 469999999 68999888 999999999776
Q ss_pred CceeeEEeccCCccCCeeEEEecc---CCCEEEEeccCCeEEEEE
Q 016185 349 PPVLIARLSHAQSKSPIRQTAMSY---DGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 349 ~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~dg~i~iwd 390 (394)
...... .++..++|++ +.+.|++++.||.+.++-
T Consensus 294 ~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 294 TKNWTK--------DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp TCSEEE--------EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred ccceEe--------cCceeEecCccccccceeEEEecCCceEEEE
Confidence 422211 3566777877 777888888888887764
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=255.17 Aligned_cols=272 Identities=8% Similarity=0.011 Sum_probs=207.4
Q ss_pred ccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCC
Q 016185 30 QEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGING 108 (394)
Q Consensus 30 ~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg 108 (394)
++-...|.+++|+| ||+++|+++.|+ |+ |...++ .+. +|...|+.++|+ |+| .++
T Consensus 12 ~~~~~~v~sv~~Sp----DG~~iASas~D~TV~--d~~~~~---~l~-----gh~~~v~~V~Fs--Pdg--------~~~ 67 (588)
T 2j04_A 12 KEFEDWKNNLTWAR----DGTLYLTTFPDISIG--QPKYAK---DIN-----CNSKNLFHVKEF--PLE--------FEN 67 (588)
T ss_dssp CCCSSSSCCEEECT----TSCEEEECSSSEEEE--EECCCS---CCS-----SBGGGTEEEEEE--CCC--------CCC
T ss_pred hHhhccEEEEEECC----CCCEEEEEcCCceee--cccccc---eec-----CCCccEEEEEEC--CCC--------Ccc
Confidence 34568899999999 899999999999 87 754443 333 689999999998 888 466
Q ss_pred eEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcE
Q 016185 109 IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGIC 188 (394)
Q Consensus 109 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~ 188 (394)
.+.+|+.+.. ....+ .|...|.+++|+| ++..|++++. ||.|++||... .
T Consensus 68 ~~~~~~~~~~-~~~~~-~~~~~V~~vawSP-dG~~LAs~s~-------------------------dg~V~iwd~~~--~ 117 (588)
T 2j04_A 68 KLDFELAQQN-GLLNS-QPVCYPRVCKPSP-IDDWMAVLSN-------------------------NGNVSVFKDNK--M 117 (588)
T ss_dssp TTTTSCCCSS-CSSTT-SCSCCEEEEEECS-SSSCEEEEET-------------------------TSCEEEEETTE--E
T ss_pred eEEEEeCCCc-eEeec-CCCCcEEEEEECC-CCCEEEEEeC-------------------------CCcEEEEeCCc--e
Confidence 6666654322 22222 4578999999999 8899999999 99999999543 4
Q ss_pred EEEeeccCCCcc-----cEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeee--
Q 016185 189 ILIFAGAGGHRN-----EVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-- 261 (394)
Q Consensus 189 ~~~~~~~~~~~~-----~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 261 (394)
+..+. |.. .+.+++|+| ++++|++|+.||+|++||+..+.... . .-..+..+
T Consensus 118 l~~l~----~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~-~---------------~~i~l~ti~~ 176 (588)
T 2j04_A 118 LTNLD----SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENT-P---------------EFYFESSIRL 176 (588)
T ss_dssp EEECC----CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTC-C---------------CCEEEEEEEC
T ss_pred eeecc----CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCcccc-c---------------cceeeeeeec
Confidence 44432 443 599999999 99999999999999999998832100 0 00013444
Q ss_pred --ecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc-cCCCCCeEEEEEeecCCcceEEEEeCCC
Q 016185 262 --SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-PVPECDIWFIKFSCDFHYNAAAIGNREG 338 (394)
Q Consensus 262 --~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg 338 (394)
.+|...|.+++|+++-+++++.|+.|++||+...+.. .....+ ..|...|.+++|+ + ..+|+++ ++
T Consensus 177 ~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~------~~~~tL~~~h~~~V~svaFs--g--~~LASa~-~~ 245 (588)
T 2j04_A 177 SDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQ------PVSRMIQNASRRKITDLKIV--D--YKVVLTC-PG 245 (588)
T ss_dssp SCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSC------CCEEEEECCCSSCCCCEEEE--T--TEEEEEC-SS
T ss_pred ccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccc------cceeeecccccCcEEEEEEE--C--CEEEEEe-CC
Confidence 6688899999999433899999999999999876520 012334 3677889999999 4 4788887 69
Q ss_pred cEEEEEecCCCceeeEEeccCCccCCeeEEEe--ccCCCEEEEeccCCeEEEEEcC
Q 016185 339 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAM--SYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
.|++||+.+++ ...... +|.+.|..++| +|++..|+++++||. ++|...
T Consensus 246 tIkLWd~~~~~--~~~~~~--gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 246 YVHKIDLKNYS--ISSLKT--GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEEETTTTE--EEEEEC--SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred eEEEEECCCCe--EEEEEc--CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999998873 212222 78899999999 999999999999999 999864
No 115
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.1e-34 Score=254.21 Aligned_cols=273 Identities=15% Similarity=0.147 Sum_probs=217.4
Q ss_pred ecCCCceeeeeccccc--ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCC-------ceeEEee
Q 016185 6 IGCEPLVGSLTPSKKR--EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEG-------GVIAALQ 75 (394)
Q Consensus 6 ~g~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~-------~~~~~~~ 75 (394)
.|..++...+.+.... .......+.+|.++|++++|+|. ++++|++++.|+ |+|||+.++ +.+..+.
T Consensus 52 ~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~---~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~ 128 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPH---NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE 128 (402)
T ss_dssp CCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTT---CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE
T ss_pred EEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCC---CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec
Confidence 3556666666654332 12345567899999999999983 478999999998 999999987 4455555
Q ss_pred ecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEE--EecCCceeEEEEcCCCCcEEEEceeeeEE
Q 016185 76 SYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF--VGHGDSINEIRTQPLKPSLVVSASKVIII 153 (394)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~~i~~ 153 (394)
.|...|.+++|+ |+++.+|++++.||.|++||+.+++.+..+ ..|...|.+++|+| ++.+|++++.
T Consensus 129 -----~h~~~v~~~~~~--p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~---- 196 (402)
T 2aq5_A 129 -----GHTKRVGIVAWH--PTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCR---- 196 (402)
T ss_dssp -----CCSSCEEEEEEC--SSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEET----
T ss_pred -----CCCCeEEEEEEC--cCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEec----
Confidence 688899999998 888449999999999999999999999999 78999999999999 7889999999
Q ss_pred eeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEe-eccCCCccc-EEEEEecCCCCeeEEee---ccCCcEEEEE
Q 016185 154 SSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIF-AGAGGHRNE-VLSVDFHPSDIYRIASC---GMDNTVKIWS 228 (394)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~-i~~~~~~~~~~~~l~s~---~~dg~v~iwd 228 (394)
|+.|++||+++++.+..+ . +|... +.++.|+| ++.+|++| +.|+.|++||
T Consensus 197 ---------------------d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd 251 (402)
T 2aq5_A 197 ---------------------DKRVRVIEPRKGTVVAEKDR---PHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWD 251 (402)
T ss_dssp ---------------------TSEEEEEETTTTEEEEEEEC---SSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEE
T ss_pred ---------------------CCcEEEEeCCCCceeeeecc---CCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEc
Confidence 999999999999998888 4 57665 89999999 99999999 7999999999
Q ss_pred ccccceeeccccccCCCCCCCCccccccceee-eecCCCceEEEEEe--CcEEE-EeecCCeEEEecCCCCCCCCCCCcc
Q 016185 229 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI-ASVHSNYVDCNRWL--GDFIL-SKSVDNEIVLWEPKMKEQSPGEGTA 304 (394)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~--~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~ 304 (394)
+++... ++.. ...|...+.++.|+ +++++ +++.||.|++||+.+++. ..
T Consensus 252 ~~~~~~----------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~-----~~ 304 (402)
T 2aq5_A 252 TKHLEE----------------------PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP-----FL 304 (402)
T ss_dssp TTBCSS----------------------CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT-----CE
T ss_pred CccccC----------------------CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc-----ce
Confidence 988431 1222 22467789999998 66775 556799999999997752 12
Q ss_pred eecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc
Q 016185 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP 350 (394)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 350 (394)
..+..+. +...+.+++|+|++ .+++ +.++.+++|++.++..
T Consensus 305 ~~l~~~~-~~~~v~~~~~sp~~--~~~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 305 HYLSMFS-SKESQRGMGYMPKR--GLEV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp EEEEEEC-CSSCCSEEEECCGG--GSCG--GGTEEEEEEEEETTEE
T ss_pred Eeecccc-cCCcccceEEeccc--ccce--ecceeEEEEEcCCCcE
Confidence 2233333 56789999999998 4554 3567999999998743
No 116
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-34 Score=253.31 Aligned_cols=284 Identities=10% Similarity=-0.006 Sum_probs=210.8
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcc
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKE 83 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~ 83 (394)
.|.+..+..+. . .+..+.+++|...|++++|+| +| .+ ..|++.+++....+.. .|.
T Consensus 30 iASas~D~TV~-d------~~~~~~l~gh~~~v~~V~FsP----dg-------~~--~~~~~~~~~~~~~~~~----~~~ 85 (588)
T 2j04_A 30 YLTTFPDISIG-Q------PKYAKDINCNSKNLFHVKEFP----LE-------FE--NKLDFELAQQNGLLNS----QPV 85 (588)
T ss_dssp EEECSSSEEEE-E------ECCCSCCSSBGGGTEEEEEEC----CC-------CC--CTTTTSCCCSSCSSTT----SCS
T ss_pred EEEEcCCceee-c------ccccceecCCCccEEEEEECC----CC-------Cc--ceEEEEeCCCceEeec----CCC
Confidence 45566666655 1 122245589999999999999 56 23 3344333332222221 347
Q ss_pred cceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCC-----ceeEEEEcCCCCcEEEEceeeeEEeeccc
Q 016185 84 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD-----SINEIRTQPLKPSLVVSASKVIIISSLSL 158 (394)
Q Consensus 84 ~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~s~~~~i~~~~~~~ 158 (394)
..|.+++|+ |+|+ +||+++.||.|++||.+. ++..+. |.. .|.+++|+| ++++|++|+.
T Consensus 86 ~~V~~vawS--PdG~-~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~--------- 149 (588)
T 2j04_A 86 CYPRVCKPS--PIDD-WMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNE--------- 149 (588)
T ss_dssp CCEEEEEEC--SSSS-CEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEET---------
T ss_pred CcEEEEEEC--CCCC-EEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcC---------
Confidence 789999999 9999 999999999999999543 666666 665 499999999 8899999999
Q ss_pred eeeeeeeccceeeeccCCcEEEEEecCCcE-------EEEeec-cCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEcc
Q 016185 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGIC-------ILIFAG-AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMK 230 (394)
Q Consensus 159 ~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~-------~~~~~~-~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 230 (394)
||+|++||+.++.. +..+.. ..+|...|.+++|+| ++ +++++.|+.|++||+.
T Consensus 150 ----------------DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~ 210 (588)
T 2j04_A 150 ----------------DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVS 210 (588)
T ss_dssp ----------------TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCC
T ss_pred ----------------CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECC
Confidence 99999999998752 555531 126888999999999 87 8888999999999998
Q ss_pred ccceeeccccccCCCCCCCCccccccceeee-ecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceeccc
Q 016185 231 EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-SVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK 309 (394)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~ 309 (394)
.... ......+ .+|...|.+++|+++.+++++ ++.|++||+.+++ ....
T Consensus 211 ~~~~--------------------~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~---------~~~~ 260 (588)
T 2j04_A 211 ASSH--------------------QPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYS---------ISSL 260 (588)
T ss_dssp SSSS--------------------CCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTE---------EEEE
T ss_pred CCcc--------------------ccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCe---------EEEE
Confidence 8321 1122345 478899999999988999887 7999999999775 2122
Q ss_pred ccCCCCCeEEEEE--eecCCcceEEEEeCCCcEEEEEecC-----CCc----------------eeeEEeccCCccCCee
Q 016185 310 YPVPECDIWFIKF--SCDFHYNAAAIGNREGKIFVWELQS-----SPP----------------VLIARLSHAQSKSPIR 366 (394)
Q Consensus 310 ~~~~~~~i~~~~~--~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~----------------~~~~~~~~~~~~~~v~ 366 (394)
..+|...+..++| +|++ ..++++++||. ++|.... ... .....+ .+...|.
T Consensus 261 ~~gh~~~V~~va~~~s~d~--~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~---~~~~~I~ 334 (588)
T 2j04_A 261 KTGSLENFHIIPLNHEKES--TILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNY---ETTLVIH 334 (588)
T ss_dssp ECSCCSCCCEEEETTCSSC--EEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSS---CCEEEEE
T ss_pred EcCCCceEEEEEeeeCCCC--CEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeee---ccceEEE
Confidence 2279999999999 9999 68999999999 9998731 110 001111 2245699
Q ss_pred EEEeccCCCEEEEecc
Q 016185 367 QTAMSYDGSTILSCCE 382 (394)
Q Consensus 367 ~~~~s~~~~~l~s~~~ 382 (394)
+++|||||+.+|+++.
T Consensus 335 ~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 335 GISLSPDGYSIAIVYD 350 (588)
T ss_dssp EEEECTTSSEEEEEEE
T ss_pred EEEECCCCCEEEEEEe
Confidence 9999999999999863
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=4e-32 Score=225.84 Aligned_cols=294 Identities=13% Similarity=0.099 Sum_probs=205.5
Q ss_pred cccceeeeeccCcc----ceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCC---ceeEEeeecccCCcccceEEEEEEE
Q 016185 21 REYRVTNKLQEGKR----PLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEG---GVIAALQSYVDEDKEESFYTVSWAC 93 (394)
Q Consensus 21 ~~~~~~~~~~~h~~----~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~ 93 (394)
..+++...|+...+ .+.++-|-..+ -....++++++..|++|+..++ +.+.++. .|+.+|..+.+.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~-----~~~~~v~~~~~~- 95 (356)
T 2w18_A 23 GNLQLVSELKNPSGSCSVDVSAMFWERAG-CKEPCIITACEDVVSLWKALDAWQWEKLYTWH-----FAEVPVLQIVPV- 95 (356)
T ss_dssp -CEEEEEEECCCCSSCEEEEEEEEEC-----CEEEEEEEESSEEEEEEESSSSBEEEEEEEE-----CCSSCEEEECCC-
T ss_pred ceeeeeehhcCCCCCeEEEEeeeeeccCC-CCccEEEEeccceEEEcccCCCccceeeEEEe-----ccCceeEEEEEc-
Confidence 44556666765433 35556665422 2245788999999999999998 6666666 677788887776
Q ss_pred cCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCC----CcEEEEceeeeEEeeccceeeeeeeccce
Q 016185 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLK----PSLVVSASKVIIISSLSLICLLLFIRSNC 169 (394)
Q Consensus 94 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~s~~~~i~~~~~~~~~~~~~~~~~~ 169 (394)
||-..++..+-.+ -+...|..++++| + +..+++++..+.+|++ +++++
T Consensus 96 -~~~~~~~~~~~~~------------------~~~~~v~sla~sp-d~~~~~~~l~s~g~~~~v~~l--------~~g~l 147 (356)
T 2w18_A 96 -PDVYNLVCVALGN------------------LEIREIRALFCSS-DDESEKQVLLKSGNIKAVLGL--------TKRRL 147 (356)
T ss_dssp -TTCCSCEEEEECS------------------SSEEEEEEECC-------CCEEEEEEEEEEEEEEE--------TTTEE
T ss_pred -Ccccceeeeeecc------------------ccccceEEEEECC-CccccccEEEeCCCeEEEEec--------CCCcE
Confidence 7655333332211 1345688899999 6 7888888887777763 46666
Q ss_pred eeec---cCCcEEEEEe-cCCcEEEEeeccCCCcccEEEEEecC--CCCeeEEeeccCCcEEEEEccccceeeccccccC
Q 016185 170 LRVG---QDESVRLWNV-QTGICILIFAGAGGHRNEVLSVDFHP--SDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 243 (394)
Q Consensus 170 ~~~~---~d~~i~vwd~-~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 243 (394)
+..+ .|+.|++|++ .+|+.+..+. +|...++.++|+| .++.+|++++.|++|++||+.+++
T Consensus 148 v~ss~~g~d~~V~~~~~s~dG~~~~s~~---~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk---------- 214 (356)
T 2w18_A 148 VSSSGTLSDQQVEVMTFAEDGGGKENQF---LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ---------- 214 (356)
T ss_dssp EEEESSSTTCEEEEEEECTTSCEEEEEE---ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC----------
T ss_pred EEecccCCCCcEEEEEECCCCceeeeec---cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc----------
Confidence 6664 4999999999 4588888777 6888888888877 467899999999999999999943
Q ss_pred CCCCCCCccccccceeeeecCC---CceEEEEEe--CcEE------------EEeecCCeEEEecCCCCCCCCCCCccee
Q 016185 244 DLPSKFPTKYVQFPVFIASVHS---NYVDCNRWL--GDFI------------LSKSVDNEIVLWEPKMKEQSPGEGTADI 306 (394)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~--~~~l------------~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 306 (394)
.+..+.+|. ..+.+++|+ |.++ ++|+.|++|++||..+++ .
T Consensus 215 -------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk---------~ 272 (356)
T 2w18_A 215 -------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL---------S 272 (356)
T ss_dssp -------------EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE---------E
T ss_pred -------------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE---------E
Confidence 455665543 346666776 5544 678889999999998875 2
Q ss_pred cccc-----cCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCee-EEEeccCCCEEEEe
Q 016185 307 LQKY-----PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIR-QTAMSYDGSTILSC 380 (394)
Q Consensus 307 ~~~~-----~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~ 380 (394)
+..+ .+|..... ..+.++ .++++++.|++|+|||+.+++ .+.++. +|...+. .++|+|||++|++|
T Consensus 273 l~v~~~~~p~Gh~~~~l--sg~~sg--~~lASgS~DgTIkIWDl~tGk--~l~tL~--gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFL--EGDVKD--HCAAAILTSGTIAIWDLLLGQ--CTALLP--PVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp EEEEEECCCTTCCCCEE--EEEEET--TEEEEEETTSCEEEEETTTCS--EEEEEC--CC--CCCCEEEECSSSSEEEEE
T ss_pred EEEEEeeccCCCcceeE--ccccCC--CEEEEEcCCCcEEEEECCCCc--EEEEec--CCCCCeEEEEEECCCCCEEEEE
Confidence 2221 24444433 333335 589999999999999999984 677777 7776655 58999999999999
Q ss_pred ccCCeEEEEEcC
Q 016185 381 CEDGAIWRWDAI 392 (394)
Q Consensus 381 ~~dg~i~iwd~~ 392 (394)
+.|++|+|||+.
T Consensus 345 S~D~TIklWd~~ 356 (356)
T 2w18_A 345 QKDGNIFVYHYS 356 (356)
T ss_dssp CTTSCEEEEEEC
T ss_pred ECCCcEEEecCC
Confidence 999999999974
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.2e-31 Score=235.08 Aligned_cols=265 Identities=12% Similarity=0.097 Sum_probs=208.8
Q ss_pred ceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEec
Q 016185 49 FNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH 127 (394)
Q Consensus 49 ~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 127 (394)
+.++++++.++ |++||+.+++.+..+. .+ ..+.+++|+ |+|+.++++++.|+.|++||+.+++.+..+..+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~-----~~-~~~~~~~~s--~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIP-----VG-SNPMGAVIS--PDGTKVYVANAHSNDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEE-----CS-SSEEEEEEC--TTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEee-----cC-CCcceEEEC--CCCCEEEEECCCCCeEEEEECCCCeEEEEEECC
Confidence 45788888888 9999999998887776 23 347778777 999834478889999999999999999888866
Q ss_pred CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEe
Q 016185 128 GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF 207 (394)
Q Consensus 128 ~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~ 207 (394)
. .+.+++|+|++..++++++. ++.|++||+.+++.+..+. +...+.+++|
T Consensus 74 ~-~v~~~~~spdg~~l~~~~~~-------------------------~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~ 123 (391)
T 1l0q_A 74 S-SPQGVAVSPDGKQVYVTNMA-------------------------SSTLSVIDTTSNTVAGTVK----TGKSPLGLAL 123 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETT-------------------------TTEEEEEETTTTEEEEEEE----CSSSEEEEEE
T ss_pred C-CccceEECCCCCEEEEEECC-------------------------CCEEEEEECCCCeEEEEEe----CCCCcceEEE
Confidence 5 89999999944445566666 8999999999999888887 4567899999
Q ss_pred cCCCCeeE-EeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEE-EEeec
Q 016185 208 HPSDIYRI-ASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFI-LSKSV 283 (394)
Q Consensus 208 ~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l-~~~~~ 283 (394)
+| +++.+ ++++.|+.|++||+.+++ .+..+..+ ..+.++.|+ ++++ ++++.
T Consensus 124 s~-dg~~l~~~~~~~~~v~~~d~~~~~-----------------------~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 124 SP-DGKKLYVTNNGDKTVSVINTVTKA-----------------------VINTVSVG-RSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp CT-TSSEEEEEETTTTEEEEEETTTTE-----------------------EEEEEECC-SSEEEEEECTTSSEEEEEETT
T ss_pred CC-CCCEEEEEeCCCCEEEEEECCCCc-----------------------EEEEEecC-CCcceEEECCCCCEEEEEeCC
Confidence 99 77755 788889999999998833 34444444 456888887 6566 67788
Q ss_pred CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEe---CCCcEEEEEecCCCceeeEEeccCC
Q 016185 284 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN---REGKIFVWELQSSPPVLIARLSHAQ 360 (394)
Q Consensus 284 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~ 360 (394)
++.|++||+++++ ....+. +...+.+++|+|++ .++++++ .++.|++||+.+++ .+..+. .
T Consensus 179 ~~~v~~~d~~~~~---------~~~~~~-~~~~~~~~~~~~~g--~~l~~~~~~~~~~~v~~~d~~~~~--~~~~~~--~ 242 (391)
T 1l0q_A 179 SMSISVIDTVTNS---------VIDTVK-VEAAPSGIAVNPEG--TKAYVTNVDKYFNTVSMIDTGTNK--ITARIP--V 242 (391)
T ss_dssp TTEEEEEETTTTE---------EEEEEE-CSSEEEEEEECTTS--SEEEEEEECSSCCEEEEEETTTTE--EEEEEE--C
T ss_pred CCEEEEEECCCCe---------EEEEEe-cCCCccceEECCCC--CEEEEEecCcCCCcEEEEECCCCe--EEEEEe--c
Confidence 9999999998765 233333 34578899999999 5677766 68999999998874 455555 3
Q ss_pred ccCCeeEEEeccCCCEE-EEeccCCeEEEEEcCC
Q 016185 361 SKSPIRQTAMSYDGSTI-LSCCEDGAIWRWDAIP 393 (394)
Q Consensus 361 ~~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~ 393 (394)
| ..+.+++|+|++++| ++++.|+.|++||+.+
T Consensus 243 ~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 243 G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred C-CCccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 3 357899999999977 6778999999999864
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.5e-32 Score=236.50 Aligned_cols=259 Identities=9% Similarity=0.105 Sum_probs=182.5
Q ss_pred EEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCC
Q 016185 62 VYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKP 141 (394)
Q Consensus 62 vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 141 (394)
||++.+...+.... .|...|.+++|+ |+|+ +|++|+.++ +++||+.+++....... ..+..+++.+...
T Consensus 3 i~s~~~~~~~~~~~-----~h~~~V~~v~fs--~dg~-~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~ 71 (355)
T 3vu4_A 3 LGSMITRNPIVPEN-----HVSNPVTDYEFN--QDQS-CLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTN 71 (355)
T ss_dssp ---------------------CCCCCEEEEC--TTSS-EEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSS
T ss_pred cccccccCCccccc-----cCCCceEEEEEC--CCCC-EEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCC
Confidence 45555555555444 688999999988 9999 999988775 78999988766655432 3578888888444
Q ss_pred cEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC
Q 016185 142 SLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 221 (394)
Q Consensus 142 ~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d 221 (394)
.++++++. |+.|++||+.+++.+..+. +...|.++++++ +. ++++ .|
T Consensus 72 ~~~~~~~~-------------------------d~~v~iWd~~~~~~~~~~~----~~~~v~~v~~~~-~~--~~~~-~~ 118 (355)
T 3vu4_A 72 YVAFVTGV-------------------------KEVVHIWDDVKKQDVSRIK----VDAPVKDLFLSR-EF--IVVS-YG 118 (355)
T ss_dssp EEEEECSS-------------------------TTEEEEEETTTTEEEEEEE----CSSCEEEEEECS-SE--EEEE-ET
T ss_pred EEEEEECC-------------------------ccEEEEEECCCCcEEEEEE----CCCceEEEEEcC-CE--EEEE-Ec
Confidence 44467777 8999999999999999887 777999999987 53 3333 47
Q ss_pred CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEE--eecCCeEEEecCCCCCCCC
Q 016185 222 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILS--KSVDNEIVLWEPKMKEQSP 299 (394)
Q Consensus 222 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~--~~~dg~i~~~d~~~~~~~~ 299 (394)
+.|++||+.+.. ..+..+.. ....++++..+++. ++.||.|++||+++++...
T Consensus 119 ~~i~i~d~~~~~----------------------~~~~~~~~---~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~ 173 (355)
T 3vu4_A 119 DVISVFKFGNPW----------------------KRITDDIR---FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSAT 173 (355)
T ss_dssp TEEEEEESSTTC----------------------CBSSCCEE---EEEEEEEETTEEEEEESSCTTCEEEEECCC-----
T ss_pred CEEEEEECCCCc----------------------eeeEEecc---CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccc
Confidence 899999999841 11222222 22233344466665 6889999999999764111
Q ss_pred CC------Cccee-cccccCCCCCeEEEEEeecCCcceEEEEeCCCc-EEEEEecCCCceeeEEeccCCccCCeeEEEec
Q 016185 300 GE------GTADI-LQKYPVPECDIWFIKFSCDFHYNAAAIGNREGK-IFVWELQSSPPVLIARLSHAQSKSPIRQTAMS 371 (394)
Q Consensus 300 ~~------~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 371 (394)
.. ..... +..+..|...|++++|+|++ .+|++|+.|++ |++||+.+++ .+..+....|...|++++|+
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g--~~l~s~s~d~~~v~iwd~~~~~--~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 174 TQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS--DMVATCSQDGTIIRVFKTEDGV--LVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp -------------CCEEECCCSSCEEEEEECTTS--SEEEEEETTCSEEEEEETTTCC--EEEEEECTTCCSCEEEEEEC
T ss_pred cccccccccccCcccEEEEccCCceEEEEECCCC--CEEEEEeCCCCEEEEEECCCCc--EEEEEEcCCCCCcEEEEEEC
Confidence 00 00112 56778899999999999999 69999999998 9999999885 45555522388999999999
Q ss_pred cCCCEEEEeccCCeEEEEEcCC
Q 016185 372 YDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 372 ~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
|++++|++++.|+.|++||++.
T Consensus 250 ~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 250 TDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp TTSCEEEEEETTCEEEEEESSC
T ss_pred CCCCEEEEEECCCEEEEEEccC
Confidence 9999999999999999999864
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-32 Score=242.30 Aligned_cols=258 Identities=13% Similarity=0.049 Sum_probs=181.1
Q ss_pred cceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEc------CCCCcEEEEeecCCeEEEEECCCCee
Q 016185 48 YFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACN------VDGIPFLVAGGINGIIRVIDVSNEKL 120 (394)
Q Consensus 48 ~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~~~~l~s~~~dg~i~vwd~~~~~~ 120 (394)
++.+||+++.|+ |+|||..+++...........+|.+.|.+++|++. .+++ +|++|+.|++|+|||+.++.+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEETTEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECCCCce
Confidence 578999999998 99999988876543332334489999999999841 1677 999999999999999999888
Q ss_pred EEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeec------
Q 016185 121 HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAG------ 194 (394)
Q Consensus 121 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~------ 194 (394)
+..+..|..+|.+++|+|++..+|++++. |++|++||+++++.......
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~-------------------------d~~v~~wd~~t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGER-------------------------NGNIRIFDWTLNLSAEENSQTELVKN 233 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEET-------------------------TSEEEEEETTCCC----------CSC
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCC-------------------------CCEEEEEECCCCcccccccccCCccc
Confidence 88888999999999999966678999999 99999999988765433211
Q ss_pred ----------------cCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccce
Q 016185 195 ----------------AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 258 (394)
Q Consensus 195 ----------------~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (394)
..+|...+.++.|.+.++..+++++.|+++++||+...+....... ..............
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~----~~~~~~~~~~~~~~ 309 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD----STMKLGPKNLLPNV 309 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------CCSCSE
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee----ecCccccEEEcccc
Confidence 1257788899998744899999999999999999987543221110 00000000001112
Q ss_pred eeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEe
Q 016185 259 FIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 259 ~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 335 (394)
.....+...+..+.+. +.++++++.||.|++||+.+++ .......|..+|.+++|+|++ ++||+++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~---------~~~~~~~~~~~V~svafspdG--~~LA~as 378 (393)
T 4gq1_A 310 QGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD---------SNSIPIQLGMPIVDFCWHQDG--SHLAIAT 378 (393)
T ss_dssp EEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT---------CCEEEEECSSCEEEEEECTTS--SEEEEEE
T ss_pred ccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc---------EEEEecCCCCcEEEEEEcCCC--CEEEEEe
Confidence 2222233333333332 3467788899999999999876 344556677899999999999 6899998
Q ss_pred CCCcEEEEEecC
Q 016185 336 REGKIFVWELQS 347 (394)
Q Consensus 336 ~dg~i~iwd~~~ 347 (394)
.+| +.+|.+..
T Consensus 379 ~~G-v~lvrL~g 389 (393)
T 4gq1_A 379 EGS-VLLTRLMG 389 (393)
T ss_dssp SSE-EEEEEEGG
T ss_pred CCC-eEEEEEeC
Confidence 765 77776653
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-32 Score=234.24 Aligned_cols=230 Identities=10% Similarity=0.071 Sum_probs=178.8
Q ss_pred cCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeec
Q 016185 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVG 173 (394)
Q Consensus 94 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~ 173 (394)
.+++. ++++|+.||.|++||+.+++.+..+. ...|.++.|+| . +++++.
T Consensus 45 ~~d~~-~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~------------------------ 93 (343)
T 3lrv_A 45 YYDKW-VCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGP------------------------ 93 (343)
T ss_dssp SEEEE-EEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECS------------------------
T ss_pred cCCCC-EEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecC------------------------
Confidence 35677 99999999999999999999888887 46788889998 3 888888
Q ss_pred cCCcEEEEEec---------CCcEEEEeeccCCCcccEEEEEecC-CCCeeEEeeccCCcEEEEEccccceeeccccccC
Q 016185 174 QDESVRLWNVQ---------TGICILIFAGAGGHRNEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 243 (394)
Q Consensus 174 ~d~~i~vwd~~---------~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 243 (394)
|+.|++|+.. +++.+..+.. +|..+|.+++|+| .++.+|++++.||.|++||+++++
T Consensus 94 -D~~i~~w~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~---------- 160 (343)
T 3lrv_A 94 -CNRLLLLYPGNQITILDSKTNKVLREIEV--DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS---------- 160 (343)
T ss_dssp -TTEEEEEETTTEEEEEETTTCCEEEEEEC--CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC----------
T ss_pred -CCeEEEEEccCceEEeecCCcceeEEeec--CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc----------
Confidence 8888888654 5554544442 5778999999998 256789999999999999999843
Q ss_pred CCCCCCCccccccceeee-ecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC-CCCCeEE
Q 016185 244 DLPSKFPTKYVQFPVFIA-SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDIWF 319 (394)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 319 (394)
.+... ..|...+.+++|+ +.++++|+.||.|++||+++++. ....+.. |..+|++
T Consensus 161 -------------~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~--------~~~~~~~~h~~~v~~ 219 (343)
T 3lrv_A 161 -------------QYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ--------ASSRFPVDEEAKIKE 219 (343)
T ss_dssp -------------EEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS--------CCEECCCCTTSCEEE
T ss_pred -------------EEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC--------CccEEeccCCCCEEE
Confidence 23333 3355679999998 78999999999999999998763 1145666 8899999
Q ss_pred EEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec-cCCccCCee--EEEeccCCCEEEEecc-CCeEEEEEcCC
Q 016185 320 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS-HAQSKSPIR--QTAMSYDGSTILSCCE-DGAIWRWDAIP 393 (394)
Q Consensus 320 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~--~~~~s~~~~~l~s~~~-dg~i~iwd~~~ 393 (394)
++|+|++ .+|++++ |+.|++||+++.+. ...+. ...|...+. +++|+|++++|++++. |+.|+||++..
T Consensus 220 l~fs~~g--~~l~s~~-~~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 220 VKFADNG--YWMVVEC-DQTVVCFDLRKDVG--TLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEECTTS--SEEEEEE-SSBEEEEETTSSTT--CBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEeCCC--CEEEEEe-CCeEEEEEcCCCCc--ceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 9999999 6899999 55999999998753 22222 112334444 6999999999999988 99999999853
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1e-30 Score=217.43 Aligned_cols=276 Identities=10% Similarity=0.070 Sum_probs=189.6
Q ss_pred eecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcC--CC--ceeEEeeecccC
Q 016185 5 AIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCL--EG--GVIAALQSYVDE 80 (394)
Q Consensus 5 a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~--~~--~~~~~~~~~~~~ 80 (394)
.++|+.......+.....++..+++..|..+|..|+|.|+. .+--.+|-|.-..-.++.+. .. .....+.. .
T Consensus 58 ~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s---~ 133 (356)
T 2w18_A 58 ITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDV-YNLVCVALGNLEIREIRALFCSSDDESEKQVLLK---S 133 (356)
T ss_dssp EEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTC-CSCEEEEECSSSEEEEEEECC------CCEEEEE---E
T ss_pred EEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcc-cceeeeeeccccccceEEEEECCCccccccEEEe---C
Confidence 35666666666666667789999999999999999999832 11112222222222222222 11 10111111 1
Q ss_pred CcccceEEEEEEEcCCCCcEEEEee--cCCeEEEEEC-CCCeeEEEEEecCCceeEEEEcC--CCCcEEEEceeeeEEee
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGG--INGIIRVIDV-SNEKLHKSFVGHGDSINEIRTQP--LKPSLVVSASKVIIISS 155 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~--~dg~i~vwd~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~s~~~~i~~~~ 155 (394)
++...+ |.. ++|+ ++.+++ .|+.|++|++ .+++.+..+.+|...+..++|+| .++.+|++++.
T Consensus 134 g~~~~v----~~l-~~g~-lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~------ 201 (356)
T 2w18_A 134 GNIKAV----LGL-TKRR-LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTI------ 201 (356)
T ss_dssp EEEEEE----EEE-TTTE-EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEET------
T ss_pred CCeEEE----Eec-CCCc-EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecC------
Confidence 233233 232 5666 666643 6999999999 45888889999999999988887 35689999999
Q ss_pred ccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeE------------EeeccCCc
Q 016185 156 LSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI------------ASCGMDNT 223 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l------------~s~~~dg~ 223 (394)
|++|+|||+++|+.++.+.....+...+.+++|+| ++.++ ++|+.|++
T Consensus 202 -------------------D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 202 -------------------MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp -------------------TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEE
T ss_pred -------------------CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcE
Confidence 99999999999999999972111234678889999 88876 56888999
Q ss_pred EEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCc
Q 016185 224 VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGT 303 (394)
Q Consensus 224 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 303 (394)
|++||..+++...... .....+|...+.+..+++.++++++.|++|+|||+.+++
T Consensus 262 IklWd~~tgk~l~v~~------------------~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk------- 316 (356)
T 2w18_A 262 LIVINPKTTLSVGVML------------------YCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQ------- 316 (356)
T ss_dssp EEEEETTTTEEEEEEE------------------ECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCS-------
T ss_pred EEEEECCCCEEEEEEE------------------eeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCc-------
Confidence 9999999854211000 000135655565666678899999999999999999887
Q ss_pred ceecccccCCCCCeE-EEEEeecCCcceEEEEeCCCcEEEEEe
Q 016185 304 ADILQKYPVPECDIW-FIKFSCDFHYNAAAIGNREGKIFVWEL 345 (394)
Q Consensus 304 ~~~~~~~~~~~~~i~-~~~~~~~~~~~~l~~~~~dg~i~iwd~ 345 (394)
.+..+.+|...+. .++|+|++ .+|++|+.|++|+|||+
T Consensus 317 --~l~tL~gH~~~vvs~vafSPDG--~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 317 --CTALLPPVSDQHWSFVKWSGTD--SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp --EEEEECCC--CCCCEEEECSSS--SEEEEECTTSCEEEEEE
T ss_pred --EEEEecCCCCCeEEEEEECCCC--CEEEEEECCCcEEEecC
Confidence 6778888876655 58999999 69999999999999996
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-31 Score=236.98 Aligned_cols=243 Identities=12% Similarity=0.080 Sum_probs=195.2
Q ss_pred cceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCe---eEEEEEec---------------------------------
Q 016185 84 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK---LHKSFVGH--------------------------------- 127 (394)
Q Consensus 84 ~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~--------------------------------- 127 (394)
.++.+++|+ ++|+ +|+++ .++.|++||+.+++ .+..+..+
T Consensus 5 ~p~~~v~~s--~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T 2vdu_B 5 HPLQNLLTS--RDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK 80 (450)
T ss_dssp CCCCEEEEC--SSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred ccEEEEEec--CCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCc
Confidence 467778877 9998 66665 57899999999888 66655533
Q ss_pred ---------------------CCceeEEEEcCCCCcE-EEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEec-
Q 016185 128 ---------------------GDSINEIRTQPLKPSL-VVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ- 184 (394)
Q Consensus 128 ---------------------~~~v~~~~~~~~~~~~-l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~- 184 (394)
.+.|.+++|+| ++.+ +++++. ||.|++||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~-------------------------dg~v~iwd~~~ 134 (450)
T 2vdu_B 81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADS-------------------------DKSLLVFDVDK 134 (450)
T ss_dssp -------------------CCCCCEEEEEECT-TSSEEEEEEGG-------------------------GTEEEEEEECS
T ss_pred CccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECC-------------------------CCeEEEEECcC
Confidence 23699999999 5565 488888 9999999999
Q ss_pred -CCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeec
Q 016185 185 -TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 263 (394)
Q Consensus 185 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (394)
+++.+..+... .|...|.+++|+| ++.+|++++.+|.+++|++.+.... ..+...+.+
T Consensus 135 ~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~~g~v~~~~~~~~~~~-------------------~~~~~~~~~ 193 (450)
T 2vdu_B 135 TSKNVLKLRKRF-CFSKRPNAISIAE-DDTTVIIADKFGDVYSIDINSIPEE-------------------KFTQEPILG 193 (450)
T ss_dssp SSSSCEEEEEEE-ECSSCEEEEEECT-TSSEEEEEETTSEEEEEETTSCCCS-------------------SCCCCCSEE
T ss_pred CCCceeeeeecc-cCCCCceEEEEcC-CCCEEEEEeCCCcEEEEecCCcccc-------------------cccceeeec
Confidence 88887777521 3678999999999 9999999999999999999884310 002336678
Q ss_pred CCCceEEEEEeC-----cEEEEeecCCeEEEecCCCCCCCCCCCcceeccc-ccCCCCCeEEEEEeecCCcceEEEEeCC
Q 016185 264 HSNYVDCNRWLG-----DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK-YPVPECDIWFIKFSCDFHYNAAAIGNRE 337 (394)
Q Consensus 264 ~~~~i~~~~~~~-----~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~~~d 337 (394)
|...|.+++|++ ++|++++.|+.|++||+++++ .+.. +.+|...|.+++|+ ++ .+|++++.|
T Consensus 194 h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---------~~~~~~~~h~~~v~~~~~s-d~--~~l~s~~~d 261 (450)
T 2vdu_B 194 HVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---------IVDKWLFGHKHFVSSICCG-KD--YLLLSAGGD 261 (450)
T ss_dssp CSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT---------CEEEECCCCSSCEEEEEEC-ST--TEEEEEESS
T ss_pred ccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc---------eeeeeecCCCCceEEEEEC-CC--CEEEEEeCC
Confidence 999999999974 399999999999999998775 3444 55788999999999 88 699999999
Q ss_pred CcEEEEEecCCCceeeEEeccC-----------------------CccCCeeEEEeccCCCEEEEec-cCCeEEEEEc
Q 016185 338 GKIFVWELQSSPPVLIARLSHA-----------------------QSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDA 391 (394)
Q Consensus 338 g~i~iwd~~~~~~~~~~~~~~~-----------------------~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~ 391 (394)
+.|++||+.+++. +..+... .....|.+++|+|++++|++++ .|+.|++|++
T Consensus 262 ~~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 262 DKIFAWDWKTGKN--LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SEEEEEETTTCCE--EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred CeEEEEECCCCcE--eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 9999999998853 3333310 2345789999999999999998 8999999999
No 124
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.6e-31 Score=230.63 Aligned_cols=274 Identities=16% Similarity=0.220 Sum_probs=197.6
Q ss_pred eeeecCCCceeeeecccc--cccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCc---------e
Q 016185 3 RTAIGCEPLVGSLTPSKK--REYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGG---------V 70 (394)
Q Consensus 3 ~~a~g~~~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~---------~ 70 (394)
..++|+.++.+.+..... ..+++...+.+|..+|++++|+|.. ++++|++++.|+ |++||+.+++ .
T Consensus 25 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~ 102 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPE--YGRIIASASYDKTVKLWEEDPDQEECSGRRWNK 102 (351)
T ss_dssp EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGG--GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEE
T ss_pred EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCC--CCCEEEEEcCCCeEEEEecCCCcccccccCcce
Confidence 367788888877776553 3346777888999999999999821 378999999998 9999998763 3
Q ss_pred eEEeeecccCCcccceEEEEEEEcCC--CCcEEEEeecCCeEEEEECCCCeeEEEEE-------------ecCCceeEEE
Q 016185 71 IAALQSYVDEDKEESFYTVSWACNVD--GIPFLVAGGINGIIRVIDVSNEKLHKSFV-------------GHGDSINEIR 135 (394)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------------~~~~~v~~~~ 135 (394)
+..+. .|...|.+++|. |+ +. +|++++.||.|++||+.+++.+..+. .|...+.+++
T Consensus 103 ~~~~~-----~~~~~v~~~~~~--~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (351)
T 3f3f_A 103 LCTLN-----DSKGSLYSVKFA--PAHLGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLS 174 (351)
T ss_dssp EEEEC-----CCSSCEEEEEEC--CGGGCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEE
T ss_pred eeeec-----ccCCceeEEEEc--CCCCCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEE
Confidence 44444 688899999988 77 88 99999999999999998876544332 5778899999
Q ss_pred EcCC--CCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcE--EEEeeccCCCcccEEEEEecCCC
Q 016185 136 TQPL--KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSD 211 (394)
Q Consensus 136 ~~~~--~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 211 (394)
|+|+ ++.++++++. ++.+.+|+...++. ...+. +|...|++++|+| +
T Consensus 175 ~~p~~~~~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~---~h~~~i~~~~~~p-~ 225 (351)
T 3f3f_A 175 WCPSRFSPEKLAVSAL-------------------------EQAIIYQRGKDGKLHVAAKLP---GHKSLIRSISWAP-S 225 (351)
T ss_dssp ECCCSSSCCEEEEEET-------------------------TEEEEEEECTTSCEEEEEECC---CCCSCEEEEEECC-C
T ss_pred eccCCCCCcEEEEecC-------------------------CCcEEEEccCCCceeeeeecC---CCCcceeEEEECC-C
Confidence 9994 3789999998 99998888777664 44444 7999999999999 7
Q ss_pred C----eeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEE------eCcEEEEe
Q 016185 212 I----YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW------LGDFILSK 281 (394)
Q Consensus 212 ~----~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~l~~~ 281 (394)
+ .+|++++.||.|++||++...... ....+......... .......+
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPL-----------------------ASEESLTNSNMFDNSADVDMDAQGRSDS 282 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC------------------------------------------------------
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCcc-----------------------ccCCcccceeccCCCccccccccccccc
Confidence 6 899999999999999999843211 11111111111111 11222233
Q ss_pred ecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 282 SVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 282 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
.....+.+|+....+ .+..+..|...|++++|+|++ .+|++++.||.|++||+.+++
T Consensus 283 ~~~~~~~~~~~~~~~---------~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 283 NTEEKAELQSNLQVE---------LLSEHDDHNGEVWSVSWNLTG--TILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --------CCSEEEE---------EEEEECTTSSCEEEEEECSSS--CCEEEEETTSCEEEEEECTTS
T ss_pred ccceeeeeccccccc---------EEEEEecccccEEEEEEcCCC--CEEEEecCCCcEEEEecCcCc
Confidence 344556666655433 677888899999999999999 689999999999999999864
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.4e-29 Score=223.53 Aligned_cols=305 Identities=15% Similarity=0.101 Sum_probs=222.3
Q ss_pred eeecCCCceeeeecccccccceeeeeccCccceeEEEEEeeCCCcceEE-EEecCCc-EEEEEcCCCceeEEeeecccCC
Q 016185 4 TAIGCEPLVGSLTPSKKREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVF-ATVGGNR-VTVYQCLEGGVIAALQSYVDED 81 (394)
Q Consensus 4 ~a~g~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~l-as~~~d~-i~vw~~~~~~~~~~~~~~~~~~ 81 (394)
.+++..+....+... ...+....+..|. .+.+++|+| +++++ ++++.++ |++||+.+++.+..+..
T Consensus 5 ~vs~~~d~~v~v~d~--~~~~~~~~~~~~~-~~~~~~~s~----dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~----- 72 (391)
T 1l0q_A 5 YIANSESDNISVIDV--TSNKVTATIPVGS-NPMGAVISP----DGTKVYVANAHSNDVSIIDTATNNVIATVPA----- 72 (391)
T ss_dssp EEEETTTTEEEEEET--TTTEEEEEEECSS-SEEEEEECT----TSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-----
T ss_pred EEEcCCCCEEEEEEC--CCCeEEEEeecCC-CcceEEECC----CCCEEEEECCCCCeEEEEECCCCeEEEEEEC-----
Confidence 345666666655543 3445666677665 489999999 67665 6776776 99999999988777762
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
...+.+++|+ |+++.++++++.++.|++||+.+++.+..+..+ ..+.+++|+|++..++++++.
T Consensus 73 -~~~v~~~~~s--pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~------------ 136 (391)
T 1l0q_A 73 -GSSPQGVAVS--PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNG------------ 136 (391)
T ss_dssp -SSSEEEEEEC--TTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETT------------
T ss_pred -CCCccceEEC--CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCC------------
Confidence 2378888887 999933456667899999999999988888755 468999999944445578888
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeE-EeeccCCcEEEEEccccceeecccc
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~ 240 (394)
++.|++||+.+++....+. ....+.+++|+| +++.+ ++++.++.|++||+++++
T Consensus 137 -------------~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~------- 191 (391)
T 1l0q_A 137 -------------DKTVSVINTVTKAVINTVS----VGRSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNS------- 191 (391)
T ss_dssp -------------TTEEEEEETTTTEEEEEEE----CCSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTE-------
T ss_pred -------------CCEEEEEECCCCcEEEEEe----cCCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCe-------
Confidence 9999999999999888887 345679999999 77655 778889999999998843
Q ss_pred ccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEee---cCCeEEEecCCCCCCCCCCCcceecccccCCCC
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKS---VDNEIVLWEPKMKEQSPGEGTADILQKYPVPEC 315 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
.+..+. +...+.+++|+ ++++++++ .++.|++||+++++ .+..+..+.
T Consensus 192 ----------------~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~---------~~~~~~~~~- 244 (391)
T 1l0q_A 192 ----------------VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK---------ITARIPVGP- 244 (391)
T ss_dssp ----------------EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE---------EEEEEECCS-
T ss_pred ----------------EEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe---------EEEEEecCC-
Confidence 233333 45678889997 67888777 68999999998765 344454443
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCee---EEE------------eccCC------
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIR---QTA------------MSYDG------ 374 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~---~~~------------~s~~~------ 374 (394)
.+.+++|+|+++ .++++++.|+.|++||+.+++ .+..+. .+..+.. .+. |+.+.
T Consensus 245 ~~~~~~~s~dg~-~l~~s~~~d~~v~v~d~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~ 319 (391)
T 1l0q_A 245 DPAGIAVTPDGK-KVYVALSFXNTVSVIDTATNT--ITATMA--VGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIF 319 (391)
T ss_dssp SEEEEEECTTSS-EEEEEETTTTEEEEEETTTTE--EEEEEE--CSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEE
T ss_pred CccEEEEccCCC-EEEEEcCCCCEEEEEECCCCc--EEEEEE--CCcCCCccceeeeccccccccccccccccccccccc
Confidence 578999999995 244777899999999999874 444444 2222110 112 22211
Q ss_pred ----CEEEEeccCCeEEEEEcCC
Q 016185 375 ----STILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 375 ----~~l~s~~~dg~i~iwd~~~ 393 (394)
..+...+.|..+++||+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~W~~~~ 342 (391)
T 1l0q_A 320 LSEPVQFTDLSKDATEWKWDFGD 342 (391)
T ss_dssp TTCCEEEEECCBSCSEEEEECSS
T ss_pred ccceEEEEeCCCCceEEEEECCC
Confidence 3466677889999999853
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=5.3e-28 Score=220.65 Aligned_cols=302 Identities=11% Similarity=0.072 Sum_probs=222.9
Q ss_pred ccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEc--CCCceeEEeeecccCCcccceEEEEEEEcC-
Q 016185 20 KREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQC--LEGGVIAALQSYVDEDKEESFYTVSWACNV- 95 (394)
Q Consensus 20 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 95 (394)
....++..++..+.. +.+++|+| +|++|++++.++ |.+||+ .+++.+..+. +......++|+ |
T Consensus 166 ~~t~~~~~~i~~g~~-~~~v~~sp----dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~------~g~~p~~va~s--p~ 232 (543)
T 1nir_A 166 GDSKKIVKVIDTGYA-VHISRMSA----SGRYLLVIGRDARIDMIDLWAKEPTKVAEIK------IGIEARSVESS--KF 232 (543)
T ss_dssp TTTCCEEEEEECSTT-EEEEEECT----TSCEEEEEETTSEEEEEETTSSSCEEEEEEE------CCSEEEEEEEC--CS
T ss_pred CCCceEEEEEecCcc-cceEEECC----CCCEEEEECCCCeEEEEECcCCCCcEEEEEe------cCCCcceEEeC--CC
Confidence 344456667763333 89999999 799999998887 999999 7887777766 23345667766 8
Q ss_pred ---CCCcEEEEee-cCCeEEEEECCCCeeEEEEEec----------C-CceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 96 ---DGIPFLVAGG-INGIIRVIDVSNEKLHKSFVGH----------G-DSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 96 ---~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~----------~-~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
+|+ +|++++ .++.|.+||..+++++..+..+ . ..+..+.++|++..++++...
T Consensus 233 ~~~dg~-~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~----------- 300 (543)
T 1nir_A 233 KGYEDR-YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE----------- 300 (543)
T ss_dssp TTCTTT-EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----------
T ss_pred cCCCCC-EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-----------
Confidence 999 787777 5899999999999999888742 2 368899999977778888888
Q ss_pred eeeeeccceeeeccCCcEEEEEecCCcEEE--EeeccCCCcccEEEEEecCCCCeeEE-eeccCCcEEEEEccccceeec
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQTGICIL--IFAGAGGHRNEVLSVDFHPSDIYRIA-SCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~ 237 (394)
++.|.+||..+++.+. .+. +...+.+++|+| ++++|+ ++..+++|.+||..+++.
T Consensus 301 --------------~g~i~vvd~~~~~~l~~~~i~----~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l--- 358 (543)
T 1nir_A 301 --------------TGKVLLVNYKDIDNLTVTSIG----AAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRL--- 358 (543)
T ss_dssp --------------TTEEEEEECTTSSSCEEEEEE----CCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEE---
T ss_pred --------------CCeEEEEEecCCCcceeEEec----cCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeE---
Confidence 9999999998766444 343 566788999999 888665 455689999999998542
Q ss_pred cccccCCCCCCCCccccccceeeeec----CCCceEEEEE-e-CcEEEEee-cCCeEEEecCCCCCCCCCCCcceecccc
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIASV----HSNYVDCNRW-L-GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKY 310 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~-~-~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 310 (394)
+..+.. |......+.. . +..++++. .|++|.+||+.+.... ....+.++++
T Consensus 359 --------------------~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~--~~~~~~v~~l 416 (543)
T 1nir_A 359 --------------------SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHP--QYAWKKVAEL 416 (543)
T ss_dssp --------------------EEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCT--TTBTSEEEEE
T ss_pred --------------------EEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCc--hhcCeEEEEE
Confidence 222322 5544333322 2 44666665 6899999999873211 0113367888
Q ss_pred cCCCCCeEEEEEeecCCcceEEEEe-------CCCcEEEEEecCCCceeeEEec------cCCccCCeeEEEeccCCCEE
Q 016185 311 PVPECDIWFIKFSCDFHYNAAAIGN-------REGKIFVWELQSSPPVLIARLS------HAQSKSPIRQTAMSYDGSTI 377 (394)
Q Consensus 311 ~~~~~~i~~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~------~~~~~~~v~~~~~s~~~~~l 377 (394)
..+...+..++++|++ ++|++++ .+++|.+||+.+.+.. ...+. ...+...+..++|+|+|+.|
T Consensus 417 ~~~g~~~~~v~~~pdg--~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~ 493 (543)
T 1nir_A 417 QGQGGGSLFIKTHPKS--SHLYVDTTFNPDARISQSVAVFDLKNLDAK-YQVLPIAEWADLGEGAKRVVQPEYNKRGDEV 493 (543)
T ss_dssp ECSCSCCCCEECCTTC--CEEEECCTTCSSHHHHTCEEEEETTCTTSC-CEEECHHHHHCCCSSCCEEEEEEECSSSSEE
T ss_pred EcCCCCceEEEcCCCC--CcEEEecCCCCCcccCceEEEEECCCCCCC-eEEeechhhcccCCCCCceEeccCCCCCCEE
Confidence 8888888899999999 5888876 2779999999988643 13331 12556789999999999998
Q ss_pred EEec-----cCCeEEEEEcCC
Q 016185 378 LSCC-----EDGAIWRWDAIP 393 (394)
Q Consensus 378 ~s~~-----~dg~i~iwd~~~ 393 (394)
+++. .|+.|.|||.++
T Consensus 494 ~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 494 WFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp EEEEECCTTSCCEEEEEETTT
T ss_pred EEEeecCCCCCCeEEEEECCC
Confidence 8663 479999999876
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=2.9e-27 Score=211.65 Aligned_cols=249 Identities=9% Similarity=-0.047 Sum_probs=194.5
Q ss_pred eeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI 106 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~ 106 (394)
.+.+|...|++++|+| ++.++++++.++ |++||+.+++.+..+. .|...+.+++|+ |+++.++++++.
T Consensus 164 ~~~~~~~~v~~~~~~~----~~~~~~s~~~d~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~l~~~~~~ 232 (433)
T 3bws_A 164 KYKKKLGFVETISIPE----HNELWVSQMQANAVHVFDLKTLAYKATVD-----LTGKWSKILLYD--PIRDLVYCSNWI 232 (433)
T ss_dssp HHHTTCCEEEEEEEGG----GTEEEEEEGGGTEEEEEETTTCCEEEEEE-----CSSSSEEEEEEE--TTTTEEEEEETT
T ss_pred cccccCCceeEEEEcC----CCEEEEEECCCCEEEEEECCCceEEEEEc-----CCCCCeeEEEEc--CCCCEEEEEecC
Confidence 4468999999999988 789999999888 9999999988887776 567788889888 999834456668
Q ss_pred CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 107 NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 107 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
|+.|++||+.+++.+..+..+ ..+.+++|+| ++..+++++. ..+.+. ..|+.|++||++++
T Consensus 233 ~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~---------------~~~~~~--~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 233 SEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK-DGKELYIAQF---------------SASNQE--SGGGRLGIYSMDKE 293 (433)
T ss_dssp TTEEEEEETTTTEEEEECCCC-SEEEEEEECT-TSSEEEEEEE---------------ESCTTC--SCCEEEEEEETTTT
T ss_pred CCcEEEEECCCCcEEEEecCC-CCceEEEEcC-CCCEEEEEEC---------------CCCccc--cCCCeEEEEECCCC
Confidence 999999999999888887754 4689999999 6667776662 000000 12789999999999
Q ss_pred cEEEEeeccCCCcccEEEEEecCCCC-eeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCC
Q 016185 187 ICILIFAGAGGHRNEVLSVDFHPSDI-YRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 265 (394)
Q Consensus 187 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (394)
+....+. +...+.+++|+| ++ .++++++.|+.|++||+.+++ .+..+. +.
T Consensus 294 ~~~~~~~----~~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~-----------------------~~~~~~-~~ 344 (433)
T 3bws_A 294 KLIDTIG----PPGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKK-----------------------VQKSIP-VF 344 (433)
T ss_dssp EEEEEEE----EEECEEEEEECS-STTEEEEEETTTTEEEEEETTTTE-----------------------EEEEEE-CS
T ss_pred cEEeecc----CCCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCc-----------------------EEEEec-CC
Confidence 8887775 677899999999 66 566777999999999998733 233333 56
Q ss_pred CceEEEEEe--CcEEEEeec---------------CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCc
Q 016185 266 NYVDCNRWL--GDFILSKSV---------------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHY 328 (394)
Q Consensus 266 ~~i~~~~~~--~~~l~~~~~---------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (394)
..+.+++|+ ++++++++. ||.|++||+.+++ .+..+.. ...+..++|+|++
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~---------~~~~~~~-~~~~~~~~~s~dg-- 412 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT---------VKEFWEA-GNQPTGLDVSPDN-- 412 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE---------EEEEEEC-SSSEEEEEECTTS--
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc---------EEEEecC-CCCCceEEEcCCC--
Confidence 778899998 667777766 5799999998765 3444444 4578999999999
Q ss_pred ceEEEEe-CCCcEEEEEecC
Q 016185 329 NAAAIGN-REGKIFVWELQS 347 (394)
Q Consensus 329 ~~l~~~~-~dg~i~iwd~~~ 347 (394)
.+|++++ .|+.|++|++..
T Consensus 413 ~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 413 RYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CEEEEEETTTTEEEEEEETT
T ss_pred CEEEEEECCCCeEEEEEecC
Confidence 5777666 599999999863
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.7e-27 Score=211.15 Aligned_cols=277 Identities=9% Similarity=0.010 Sum_probs=203.2
Q ss_pred cceeEEEEEeeCCCcceEEEEec----C-C----cEEEEEc--CCCceeEE--eeecccCCcccceEEEEEEEc------
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVG----G-N----RVTVYQC--LEGGVIAA--LQSYVDEDKEESFYTVSWACN------ 94 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~----~-d----~i~vw~~--~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~------ 94 (394)
..+...+|++. ..+++++|+ . + .++|||+ .+++.+.. +. .|...+..+++.+.
T Consensus 63 ~~~~~~~w~~~---g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~d~~~~~ 134 (415)
T 2hqs_A 63 QEVQPAAWSAL---GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK-----VNKQWLRYAGHTASDEVFEK 134 (415)
T ss_dssp GGCCHHHHHTT---TCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEE-----ECGGGHHHHHHHHHHHHHHH
T ss_pred cCcCHHHHHhc---CCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEE-----cChhHHHHHHHHHHHHHHHH
Confidence 45677777762 235676775 2 2 3899999 88886633 44 34445555544421
Q ss_pred ------CCCCcEEEEeecC------CeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeee
Q 016185 95 ------VDGIPFLVAGGIN------GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLL 162 (394)
Q Consensus 95 ------~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~ 162 (394)
+.+. .++.++.+ +.|++||+. +...+.+..|...+.+++|+| +++.|++++.
T Consensus 135 ~~g~~~~~~~-~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~------------- 198 (415)
T 2hqs_A 135 LTGIKGAFRT-RIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSP-DGSKLAYVTF------------- 198 (415)
T ss_dssp HHSSCCCTTC-EEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECT-TSSEEEEEEC-------------
T ss_pred HcCCCCcCCC-EEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcC-CCCEEEEEEe-------------
Confidence 1244 55555543 799999986 556778888999999999999 7788888887
Q ss_pred eeeccceeeeccCC---cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEE-eeccCCc--EEEEEccccceee
Q 016185 163 LFIRSNCLRVGQDE---SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIA-SCGMDNT--VKIWSMKEFWTYV 236 (394)
Q Consensus 163 ~~~~~~~~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-s~~~dg~--v~iwd~~~~~~~~ 236 (394)
++ .|++||+++++... +. .|...+.+++|+| +++.|+ +++.++. |++||+.+++
T Consensus 199 ------------~~~~~~i~~~d~~tg~~~~-l~---~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~--- 258 (415)
T 2hqs_A 199 ------------ESGRSALVIQTLANGAVRQ-VA---SFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQ--- 258 (415)
T ss_dssp ------------TTSSCEEEEEETTTCCEEE-EE---CCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCC---
T ss_pred ------------cCCCcEEEEEECCCCcEEE-ee---cCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCC---
Confidence 64 99999999988764 44 5788999999999 888666 6666655 9999998732
Q ss_pred ccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec-CC--eEEEecCCCCCCCCCCCcceeccccc
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV-DN--EIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
...+..|...+.+++|+ |++|++++. ++ .|.+||+.+++ ...+.
T Consensus 259 ---------------------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~----------~~~l~ 307 (415)
T 2hqs_A 259 ---------------------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA----------PQRIT 307 (415)
T ss_dssp ---------------------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC----------CEECC
T ss_pred ---------------------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC----------EEEEe
Confidence 34556678889999997 777887775 44 68888988764 23334
Q ss_pred CCCCCeEEEEEeecCCcceEEEEeCC---CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCC---e
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGNRE---GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG---A 385 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~ 385 (394)
.+...+..++|+|++ .+|++++.+ ..|++||+.+++. ..+. .+. .+.+++|+|+|++|++++.++ .
T Consensus 308 ~~~~~~~~~~~spdG--~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~--~~~-~~~~~~~spdg~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 308 WEGSQNQDADVSSDG--KFMVMVSSNGGQQHIAKQDLATGGV---QVLS--STF-LDETPSLAPNGTMVIYSSSQGMGSV 379 (415)
T ss_dssp CSSSEEEEEEECTTS--SEEEEEEECSSCEEEEEEETTTCCE---EECC--CSS-SCEEEEECTTSSEEEEEEEETTEEE
T ss_pred cCCCcccCeEECCCC--CEEEEEECcCCceEEEEEECCCCCE---EEec--CCC-CcCCeEEcCCCCEEEEEEcCCCccE
Confidence 455678899999999 577776654 5899999998752 3444 443 799999999999999998877 7
Q ss_pred EEEEEcCC
Q 016185 386 IWRWDAIP 393 (394)
Q Consensus 386 i~iwd~~~ 393 (394)
|++||+..
T Consensus 380 l~~~d~~g 387 (415)
T 2hqs_A 380 LNLVSTDG 387 (415)
T ss_dssp EEEEETTS
T ss_pred EEEEECCC
Confidence 99999753
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=5.6e-26 Score=207.32 Aligned_cols=280 Identities=10% Similarity=0.045 Sum_probs=210.5
Q ss_pred EEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEEC--C
Q 016185 40 VFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV--S 116 (394)
Q Consensus 40 ~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~--~ 116 (394)
+|+| ++.++++++.++ |.+||..+++.+..+.. ++ .+..++++ |+|+ +|++++.|+.|.+||+ .
T Consensus 144 ~~~p----~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~----g~--~~~~v~~s--pdg~-~l~v~~~d~~V~v~D~~~~ 210 (543)
T 1nir_A 144 DLDL----PNLFSVTLRDAGQIALVDGDSKKIVKVIDT----GY--AVHISRMS--ASGR-YLLVIGRDARIDMIDLWAK 210 (543)
T ss_dssp CCCG----GGEEEEEEGGGTEEEEEETTTCCEEEEEEC----ST--TEEEEEEC--TTSC-EEEEEETTSEEEEEETTSS
T ss_pred ccCC----CCEEEEEEcCCCeEEEEECCCceEEEEEec----Cc--ccceEEEC--CCCC-EEEEECCCCeEEEEECcCC
Confidence 3788 688999998888 99999999998888772 12 26667776 9999 9999999999999999 8
Q ss_pred CCeeEEEEEecCCceeEEEEcC----CCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEe
Q 016185 117 NEKLHKSFVGHGDSINEIRTQP----LKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIF 192 (394)
Q Consensus 117 ~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 192 (394)
+++.+.++. +...+..++|+| ++..++++... +++|.+||..+++.+..+
T Consensus 211 t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~-------------------------~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 211 EPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYW-------------------------PPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp SCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEE-------------------------SSEEEEEETTTCCEEEEE
T ss_pred CCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEcc-------------------------CCeEEEEeccccccceee
Confidence 888888888 455679999999 66544444446 899999999999998888
Q ss_pred eccCC-------C-cccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecC
Q 016185 193 AGAGG-------H-RNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 264 (394)
Q Consensus 193 ~~~~~-------~-~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (394)
..... | ...+.++.++|++..++++...++.|.+||+.+.+. ..+..+ .+
T Consensus 265 ~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~---------------------l~~~~i-~~ 322 (543)
T 1nir_A 265 STRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN---------------------LTVTSI-GA 322 (543)
T ss_dssp ECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS---------------------CEEEEE-EC
T ss_pred cccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc---------------------ceeEEe-cc
Confidence 62100 2 237899999995567778888899999999987321 011122 24
Q ss_pred CCceEEEEEe--CcEEEEe-ecCCeEEEecCCCCCCCCCCCcceecccccC----CCCCeEEEEEeecCCcceEEEEe-C
Q 016185 265 SNYVDCNRWL--GDFILSK-SVDNEIVLWEPKMKEQSPGEGTADILQKYPV----PECDIWFIKFSCDFHYNAAAIGN-R 336 (394)
Q Consensus 265 ~~~i~~~~~~--~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~l~~~~-~ 336 (394)
...+..+.|+ +++++++ ..+++|.+||+.+++ ++..+.. |......+ ++|++. .+++++. .
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~---------l~~~i~~g~~ph~g~g~~~-~~p~~g-~~~~s~~~~ 391 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR---------LSALVDVGKTPHPGRGANF-VHPKYG-PVWSTSHLG 391 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE---------EEEEEECSSSBCCTTCEEE-EETTTE-EEEEEEBSS
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECCCCe---------EEEeeccCCCCCCCCCccc-CCCCCc-cEEEeccCC
Confidence 5667788887 7766554 568999999999876 3333332 33323232 467743 5677765 6
Q ss_pred CCcEEEEEecCCC-----ceeeEEeccCCccCCeeEEEeccCCCEEEEec-------cCCeEEEEEcCC
Q 016185 337 EGKIFVWELQSSP-----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-------EDGAIWRWDAIP 393 (394)
Q Consensus 337 dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-------~dg~i~iwd~~~ 393 (394)
|++|.+||+.+.. .+.+.++. .|...+..++++|++++|++++ .+++|.|||+.+
T Consensus 392 d~~V~v~d~~~~~~~~~~~~~v~~l~--~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 392 DGSISLIGTDPKNHPQYAWKKVAELQ--GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp SSEEEEEECCTTTCTTTBTSEEEEEE--CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred CceEEEEEeCCCCCchhcCeEEEEEE--cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 8999999998721 35778888 7777888999999999999987 378999999975
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=3.9e-26 Score=202.38 Aligned_cols=267 Identities=13% Similarity=0.043 Sum_probs=198.0
Q ss_pred eeeeccCccceeEEEEEeeC-------C---CcceEEEEecCC------c-EEEEEcCCCceeEEeeecccCCcccceEE
Q 016185 26 TNKLQEGKRPLYAVVFNFID-------S---RYFNVFATVGGN------R-VTVYQCLEGGVIAALQSYVDEDKEESFYT 88 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~-------~---~~~~~las~~~d------~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~ 88 (394)
...+.+|...+..+++++.+ + ..+..++.++.+ + |++||+.. .....+. .|...+.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~-----~~~~~v~~ 183 (415)
T 2hqs_A 110 QNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVH-----RSPQPLMS 183 (415)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEE-----EESSCEEE
T ss_pred eeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEe-----CCCCccee
Confidence 35678898888888877510 0 014455555442 5 99999864 4455555 46778888
Q ss_pred EEEEEcCCCCcEEEEeecCC---eEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEE-EceeeeEEeeccceeeeee
Q 016185 89 VSWACNVDGIPFLVAGGING---IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVV-SASKVIIISSLSLICLLLF 164 (394)
Q Consensus 89 ~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~~i~~~~~~~~~~~~~ 164 (394)
++|+ |+|+ .|++++.++ .|++||+.+++.. .+..|...+.+++|+| +++.|+ +++.
T Consensus 184 ~~~S--pdg~-~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~la~~~~~--------------- 243 (415)
T 2hqs_A 184 PAWS--PDGS-KLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAFALSK--------------- 243 (415)
T ss_dssp EEEC--TTSS-EEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEEEECT---------------
T ss_pred eEEc--CCCC-EEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCEEEEEEec---------------
Confidence 9888 9999 899888775 9999999988765 5677888999999999 556555 6665
Q ss_pred eccceeeeccCCc--EEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeecc-CC--cEEEEEccccceeeccc
Q 016185 165 IRSNCLRVGQDES--VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-DN--TVKIWSMKEFWTYVEKS 239 (394)
Q Consensus 165 ~~~~~~~~~~d~~--i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~ 239 (394)
++. |++||+++++. ..+. .|...+.+++|+| +++.|++++. ++ .|.+||+.+++
T Consensus 244 ----------~g~~~i~~~d~~~~~~-~~l~---~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~------ 302 (415)
T 2hqs_A 244 ----------TGSLNLYVMDLASGQI-RQVT---DGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGA------ 302 (415)
T ss_dssp ----------TSSCEEEEEETTTCCE-EECC---CCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSC------
T ss_pred ----------CCCceEEEEECCCCCE-EeCc---CCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCC------
Confidence 554 99999988876 3444 5888999999999 8888887775 45 57777877632
Q ss_pred cccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecC---CeEEEecCCCCCCCCCCCcceecccccCCC
Q 016185 240 FTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD---NEIVLWEPKMKEQSPGEGTADILQKYPVPE 314 (394)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 314 (394)
...+..+...+.+++|+ |++|++++.+ ..|.+||+.+++ ...+..+.
T Consensus 303 ------------------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~----------~~~l~~~~ 354 (415)
T 2hqs_A 303 ------------------PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG----------VQVLSSTF 354 (415)
T ss_dssp ------------------CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC----------EEECCCSS
T ss_pred ------------------EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC----------EEEecCCC
Confidence 23344566778889997 7788887764 589999998775 12333333
Q ss_pred CCeEEEEEeecCCcceEEEEeCCC---cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC
Q 016185 315 CDIWFIKFSCDFHYNAAAIGNREG---KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 375 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 375 (394)
.+..++|+|++ .+|++++.++ .|++||+..+ ....+. .|.+.|.+++|+|...
T Consensus 355 -~~~~~~~spdg--~~l~~~s~~~~~~~l~~~d~~g~---~~~~l~--~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 355 -LDETPSLAPNG--TMVIYSSSQGMGSVLNLVSTDGR---FKARLP--ATDGQVKFPAWSPYLH 410 (415)
T ss_dssp -SCEEEEECTTS--SEEEEEEEETTEEEEEEEETTSC---CEEECC--CSSSEEEEEEECCCCC
T ss_pred -CcCCeEEcCCC--CEEEEEEcCCCccEEEEEECCCC---cEEEee--CCCCCCcCCccccccc
Confidence 78999999999 5777777766 7999998754 456666 7889999999999643
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=4.2e-25 Score=190.31 Aligned_cols=279 Identities=9% Similarity=0.039 Sum_probs=192.6
Q ss_pred cceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEe-ecCCeEEEEECCCCee-EEEE
Q 016185 48 YFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG-GINGIIRVIDVSNEKL-HKSF 124 (394)
Q Consensus 48 ~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~-~~~~ 124 (394)
.+.++++++.++ |.+||..+++.+..+. .+.... .++|+ |+|+ +++++ ..++.|.+||+.+++. ...+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-----~~~~~~-~~~~s--~dg~-~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQIT-----LGYDFV-DTAIT--SDCS-NVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEE-----CCCCEE-EEEEC--SSSC-EEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEE-----ccCCcc-eEEEc--CCCC-EEEEEeCCCCeEEEEECCCCceeEEec
Confidence 356677777777 9999999998877766 233344 66666 9998 55555 4489999999999887 7777
Q ss_pred EecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC-C--cEEEEEecCCcEEEEeeccCCCccc
Q 016185 125 VGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD-E--SVRLWNVQTGICILIFAGAGGHRNE 201 (394)
Q Consensus 125 ~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d-~--~i~vwd~~~~~~~~~~~~~~~~~~~ 201 (394)
..+..+..+++|+| ++++++++.. + + .|.+||+.+++.+..+. ....
T Consensus 80 ~~~~~~~~~~~~s~-dg~~l~~~~~-------------------------~~~~~~i~v~d~~~~~~~~~~~----~~~~ 129 (331)
T 3u4y_A 80 QEGQSSMADVDITP-DDQFAVTVTG-------------------------LNHPFNMQSYSFLKNKFISTIP----IPYD 129 (331)
T ss_dssp EECSSCCCCEEECT-TSSEEEECCC-------------------------SSSSCEEEEEETTTTEEEEEEE----CCTT
T ss_pred ccCCCCccceEECC-CCCEEEEecC-------------------------CCCcccEEEEECCCCCeEEEEE----CCCC
Confidence 77777766699999 6677776554 4 3 89999999999888876 4456
Q ss_pred EEEEEecCCCCeeEE-eeccCCc-EEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcE
Q 016185 202 VLSVDFHPSDIYRIA-SCGMDNT-VKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDF 277 (394)
Q Consensus 202 i~~~~~~~~~~~~l~-s~~~dg~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~ 277 (394)
..+++|+| ++++++ +...++. +.+|++....... ... ............+.|+ +++
T Consensus 130 ~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~------------------~~~-~~~~~~~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 130 AVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLF------------------DTG-QEFISGGTRPFNITFTPDGNF 189 (331)
T ss_dssp EEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEE------------------EEE-EEEECSSSSEEEEEECTTSSE
T ss_pred ccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEe------------------ecC-CccccCCCCccceEECCCCCE
Confidence 68999999 776554 4455688 9999998622100 000 1111334457888887 664
Q ss_pred E-EEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEe
Q 016185 278 I-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL 356 (394)
Q Consensus 278 l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 356 (394)
+ +++..++.|.+||+.+++. ...+..+... ..+..++|+|+++ .++++...++.|.+||+.+++...+..+
T Consensus 190 l~v~~~~~~~v~v~d~~~~~~------~~~~~~~~~~-~~~~~~~~spdg~-~l~v~~~~~~~i~~~d~~~~~~~~~~~~ 261 (331)
T 3u4y_A 190 AFVANLIGNSIGILETQNPEN------ITLLNAVGTN-NLPGTIVVSRDGS-TVYVLTESTVDVFNFNQLSGTLSFVKSF 261 (331)
T ss_dssp EEEEETTTTEEEEEECSSTTS------CEEEEEEECS-SCCCCEEECTTSS-EEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCcc------cceeeeccCC-CCCceEEECCCCC-EEEEEEcCCCEEEEEECCCCceeeeccc
Confidence 5 5555689999999987752 0113333332 4567899999994 2344445678899999988754334444
Q ss_pred ccC--Ccc---CCeeEEEeccCCCEEEEec-cCCeEEEEEcCC
Q 016185 357 SHA--QSK---SPIRQTAMSYDGSTILSCC-EDGAIWRWDAIP 393 (394)
Q Consensus 357 ~~~--~~~---~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~ 393 (394)
... .+. .....++|+||+++|++++ .++.|.+||+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 262 GHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp ECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred ccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 311 111 2235689999999886554 567999999875
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=8.9e-25 Score=189.10 Aligned_cols=279 Identities=11% Similarity=0.084 Sum_probs=183.2
Q ss_pred ceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC-CeEEEEECC--CCe--eEE
Q 016185 49 FNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN-GIIRVIDVS--NEK--LHK 122 (394)
Q Consensus 49 ~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d-g~i~vwd~~--~~~--~~~ 122 (394)
..++++++.++ |++|++........+... .+...+..++|+ |+|+ +|++++.+ +.|.+|++. +++ .+.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s--pdg~-~l~~~~~~~~~v~~~~~~~~~~~~~~~~ 78 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV---DVPGQVQPMVVS--PDKR-YLYVGVRPEFRVLAYRIAPDDGALTFAA 78 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE---ECSSCCCCEEEC--TTSS-EEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE---ecCCCCceEEEC--CCCC-EEEEeecCCCeEEEEEecCCCCceeecc
Confidence 34555546666 999998643222222221 245567778887 9999 77777776 999999997 444 344
Q ss_pred EEEecCCceeEEEEcCCCCc-EEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEec---CCcEEEEeeccCCC
Q 016185 123 SFVGHGDSINEIRTQPLKPS-LVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ---TGICILIFAGAGGH 198 (394)
Q Consensus 123 ~~~~~~~~v~~~~~~~~~~~-~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~ 198 (394)
.+..+. .+..++|+| +++ +++++.. ++.|.+||+. ..+....+. .
T Consensus 79 ~~~~~~-~~~~~~~s~-dg~~l~~~~~~-------------------------~~~i~~~d~~~~~~~~~~~~~~----~ 127 (343)
T 1ri6_A 79 ESALPG-SLTHISTDH-QGQFVFVGSYN-------------------------AGNVSVTRLEDGLPVGVVDVVE----G 127 (343)
T ss_dssp EEECSS-CCSEEEECT-TSSEEEEEETT-------------------------TTEEEEEEEETTEEEEEEEEEC----C
T ss_pred ccccCC-CCcEEEEcC-CCCEEEEEecC-------------------------CCeEEEEECCCCcccccccccc----C
Confidence 555444 789999999 555 4455556 7889999994 334444443 3
Q ss_pred cccEEEEEecCCCCeeEEeec-cCCcEEEEEccc-cceeeccccccCCCCCCCCcccccccee--eeec-CCCceEEEEE
Q 016185 199 RNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYVQFPVF--IASV-HSNYVDCNRW 273 (394)
Q Consensus 199 ~~~i~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~i~~~~~ 273 (394)
...+.+++|+| +++.+++++ .++.|++||+.+ ++.. ... .... ....+..++|
T Consensus 128 ~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 128 LDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLV---------------------AQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp CTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEE---------------------EEEEEEEECSTTCCEEEEEE
T ss_pred CCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCcee---------------------eecccccccCCCCCcceEEE
Confidence 45688999999 887676666 899999999986 3210 011 1222 2346778888
Q ss_pred e--CcEEE-EeecCCeEEEecCCCCCCCCCCCcceecccccC---CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEec-
Q 016185 274 L--GDFIL-SKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV---PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQ- 346 (394)
Q Consensus 274 ~--~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~- 346 (394)
+ +++++ ++..++.|.+||+....... ........+.. ....+..++|+|+++ .+++++..++.|++||+.
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~i~~s~dg~-~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNI--ECVQTLDMMPENFSDTRWAADIHITPDGR-HLYACDRTASLITVFSVSE 262 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCC--EEEEEEECSCTTCCSCCCEEEEEECTTSS-EEEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcE--EEEeeccccCccccccCCccceEECCCCC-EEEEEecCCCEEEEEEEcC
Confidence 7 66565 44589999999996421100 00111111221 134577899999995 234456689999999998
Q ss_pred -CCCceeeEEeccCCccCCeeEEEeccCCCEEEEec-cCCeEEEEEcC
Q 016185 347 -SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDAI 392 (394)
Q Consensus 347 -~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~ 392 (394)
++....+..+. .+. .+..++|+|++++|++++ .++.|.+|++.
T Consensus 263 ~~~~~~~~~~~~--~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 263 DGSVLSKEGFQP--TET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TSCCEEEEEEEE--CSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCceEEeeeec--CCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 33334444454 333 388999999999888877 68999999664
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=2.7e-24 Score=186.91 Aligned_cols=270 Identities=11% Similarity=0.094 Sum_probs=197.6
Q ss_pred CccceeEEEEEeeCCCcceEEEEecC-------Cc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEE
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGG-------NR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVA 103 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~-------d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s 103 (394)
....+..++|+| +++++++++. ++ |.+||..+++.+..+.. ......++|+ |+|+.++++
T Consensus 39 ~~~~~~~~~~s~----dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~~~~~s--~dg~~l~v~ 106 (353)
T 3vgz_A 39 VGKGAYEMAYSQ----QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN------DLKPFGATIN--NTTQTLWFG 106 (353)
T ss_dssp EESSEEEEEEET----TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE------SSCCCSEEEE--TTTTEEEEE
T ss_pred hccCccceEECC----CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec------CCCcceEEEC--CCCCEEEEE
Confidence 346788999999 6766666653 33 99999999988777763 2234557777 999845556
Q ss_pred eecCCeEEEEECCCCeeEEEEEecCCc---------eeEEEEcCCCCcEEEEce--eeeEEeeccceeeeeeeccceeee
Q 016185 104 GGINGIIRVIDVSNEKLHKSFVGHGDS---------INEIRTQPLKPSLVVSAS--KVIIISSLSLICLLLFIRSNCLRV 172 (394)
Q Consensus 104 ~~~dg~i~vwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~s~~--~~i~~~~~~~~~~~~~~~~~~~~~ 172 (394)
...++.|.+||..+++.+..+..+... +.+++|+| +++.++.++ .
T Consensus 107 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~----------------------- 162 (353)
T 3vgz_A 107 NTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGK----------------------- 162 (353)
T ss_dssp ETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESS-----------------------
T ss_pred ecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCC-----------------------
Confidence 666899999999999988888765422 68899999 555444443 4
Q ss_pred ccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcc
Q 016185 173 GQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 252 (394)
Q Consensus 173 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 252 (394)
++.|.+||..+++....+. .+...+.+++|+| +++.+++++.++.|.+||+.+++.
T Consensus 163 --~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~------------------ 218 (353)
T 3vgz_A 163 --ESVIWVVDGGNIKLKTAIQ---NTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKI------------------ 218 (353)
T ss_dssp --SCEEEEEETTTTEEEEEEC---CCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEE------------------
T ss_pred --CceEEEEcCCCCceEEEec---CCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeE------------------
Confidence 7889999999999888876 3556688999999 888898888999999999988432
Q ss_pred ccccceeeee----cCCCceEEEEEe--CcEEEEee-cCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeec
Q 016185 253 YVQFPVFIAS----VHSNYVDCNRWL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD 325 (394)
Q Consensus 253 ~~~~~~~~~~----~~~~~i~~~~~~--~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (394)
+..+. .+...+..++|+ ++++++++ .++.|.+||+.+++ .+..+.... ...++|+|+
T Consensus 219 -----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~---------~~~~~~~~~--~~~~~~s~d 282 (353)
T 3vgz_A 219 -----LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN---------ILAKVAAPE--SLAVLFNPA 282 (353)
T ss_dssp -----EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC---------EEEEEECSS--CCCEEEETT
T ss_pred -----EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc---------EEEEEEcCC--CceEEECCC
Confidence 22222 245567788887 66665555 45999999998775 333333322 246899999
Q ss_pred CCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC
Q 016185 326 FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 383 (394)
Q Consensus 326 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 383 (394)
++ .++++...++.|.+||..+++ .+..+.. ...+.+++|+|+|++|+++..+
T Consensus 283 g~-~l~v~~~~~~~v~~~d~~~~~--~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 283 RN-EAYVTHRQAGKVSVIDAKSYK--VVKTFDT---PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TT-EEEEEETTTTEEEEEETTTTE--EEEEEEC---CSEEEEEEECTTSCEEEEEEEC
T ss_pred CC-EEEEEECCCCeEEEEECCCCe--EEEEEec---CCCCCeEEEcCCCCEEEEEEcc
Confidence 95 245555579999999998874 4455542 2468899999999977776554
No 134
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=1.3e-24 Score=214.33 Aligned_cols=310 Identities=12% Similarity=0.025 Sum_probs=223.4
Q ss_pred eeeeccCccceeEEEEEeeCCCcceEEEEecCC-------cEEEEEcCCCceeEEeeecccCCcccce-------EEEEE
Q 016185 26 TNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGN-------RVTVYQCLEGGVIAALQSYVDEDKEESF-------YTVSW 91 (394)
Q Consensus 26 ~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d-------~i~vw~~~~~~~~~~~~~~~~~~~~~~v-------~~~~~ 91 (394)
.+.+.+|...|.+++||| ||++||+++.+ .|++|++.+++ ...+. .|...+ ..++|
T Consensus 45 ~~~lt~~~~~v~~~~~SP----DG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt-----~~~~~~~~~~~~~~~~~~ 114 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFP----DGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRIT-----YFSGKSTGRRMFTDVAGF 114 (1045)
T ss_dssp EEEEECSSSEEEEEEECT----TSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECC-----CCCEEEETTEECSEEEEE
T ss_pred EEEeeeCCCcccCeEECC----CCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcc-----cCCCcccccccccccccC
Confidence 345678999999999999 89999987543 29999988776 44554 455566 77888
Q ss_pred EEcCCCCcEEEEeecC------CeEEEEECCCCeeE--------------------------------------------
Q 016185 92 ACNVDGIPFLVAGGIN------GIIRVIDVSNEKLH-------------------------------------------- 121 (394)
Q Consensus 92 ~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~-------------------------------------------- 121 (394)
+ |||+ ++++++.+ ..|.+|++..++..
T Consensus 115 S--pDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~ 191 (1045)
T 1k32_A 115 D--PDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEV 191 (1045)
T ss_dssp C--TTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEE
T ss_pred C--CCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEEC
Confidence 7 9999 88888754 45778887554322
Q ss_pred -----EEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeecc--------------ceeeeeeeccceeeeccCCcEEE
Q 016185 122 -----KSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLS--------------LICLLLFIRSNCLRVGQDESVRL 180 (394)
Q Consensus 122 -----~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~--------------~~~~~~~~~~~~~~~~~d~~i~v 180 (394)
..+.+|...+.++.|++ + .++++++. ...+|... .....+.++++.++.+.++.|.+
T Consensus 192 ~~~~~~~l~~~~~~v~~~~~s~-d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~ 269 (1045)
T 1k32_A 192 NSGAFKKIVDMSTHVSSPVIVG-H-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYI 269 (1045)
T ss_dssp ETTEEEEEECCSSCCEEEEEET-T-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEE
T ss_pred CCCCeEECcCCCCcccceEEeC-C-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEE
Confidence 22345677788888887 4 55555432 45666532 12334455666555567999999
Q ss_pred EEecCCcEEEEeeccC--------CCcccEEEEEec-CCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCc
Q 016185 181 WNVQTGICILIFAGAG--------GHRNEVLSVDFH-PSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 251 (394)
Q Consensus 181 wd~~~~~~~~~~~~~~--------~~~~~i~~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 251 (394)
||+...+ +..+.... .|...+.+++|+ | +++.|++++ ++.+.+|++..+.
T Consensus 270 ~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~------------------ 328 (1045)
T 1k32_A 270 FNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTY------------------ 328 (1045)
T ss_dssp ECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSB------------------
T ss_pred ecCCceE-eeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCc------------------
Confidence 9984443 33444100 034478999999 9 999888887 7899999987732
Q ss_pred cccccceeeeecCCC-ceEEEEEe-CcEEEEeecCCeEE-EecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCc
Q 016185 252 KYVQFPVFIASVHSN-YVDCNRWL-GDFILSKSVDNEIV-LWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHY 328 (394)
Q Consensus 252 ~~~~~~~~~~~~~~~-~i~~~~~~-~~~l~~~~~dg~i~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (394)
...+..|.. .+..+.|+ |+.++.++.++.+. +||+..++ ...+..+...+..++|+|++
T Consensus 329 ------~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~----------~~~l~~~~~~~~~~~~SpDG-- 390 (1045)
T 1k32_A 329 ------VLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK----------AEKFEENLGNVFAMGVDRNG-- 390 (1045)
T ss_dssp ------EEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC----------EEECCCCCCSEEEEEECTTS--
T ss_pred ------eEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCC----------ceEecCCccceeeeEECCCC--
Confidence 223445666 67777776 66788888888888 99988664 22333666789999999999
Q ss_pred ceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCC----------eEEEEEcCC
Q 016185 329 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG----------AIWRWDAIP 393 (394)
Q Consensus 329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg----------~i~iwd~~~ 393 (394)
.+|++++.++.|++||+.+++ ....+. +|...+..++|+|||++|++++.++ .|++||+.+
T Consensus 391 ~~la~~~~~~~v~~~d~~tg~--~~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 391 KFAVVANDRFEIMTVDLETGK--PTVIER--SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp SEEEEEETTSEEEEEETTTCC--EEEEEE--CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CEEEEECCCCeEEEEECCCCc--eEEecc--CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 689999999999999999885 333344 6778899999999999999887654 899999864
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=3.8e-25 Score=187.19 Aligned_cols=255 Identities=13% Similarity=0.140 Sum_probs=187.0
Q ss_pred cCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC-CeeEEEEEec-CCcee
Q 016185 56 GGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-EKLHKSFVGH-GDSIN 132 (394)
Q Consensus 56 ~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~-~~~v~ 132 (394)
+.++ |++||+.+++..... .|...+.+++|+ |+|+ +|++++ ++.|.+||+.+ ++.......+ ...+.
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~------~~~~~v~~~~~s--pdg~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVW------QTPELFEAPNWS--PDGK-YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEE------EESSCCEEEEEC--TTSS-EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CcceeEEEEeCCCCceeeec------cCCcceEeeEEC--CCCC-EEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 4455 999999888765333 357788889888 9999 888876 78999999998 7776666555 36789
Q ss_pred EEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEec--CCcEEEEeeccCCCcccEEEEEecCC
Q 016185 133 EIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ--TGICILIFAGAGGHRNEVLSVDFHPS 210 (394)
Q Consensus 133 ~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~i~~~~~~~~ 210 (394)
+++|+| ++..|++++. ..++...+|.++ +++ ...+. +...+..++|+|
T Consensus 89 ~~~~sp-dg~~l~~~~~-----------------------~~~~~~~l~~~~~~~~~-~~~~~----~~~~~~~~~~sp- 138 (297)
T 2ojh_A 89 DHGISP-DGALYAISDK-----------------------VEFGKSAIYLLPSTGGT-PRLMT----KNLPSYWHGWSP- 138 (297)
T ss_dssp CCEECT-TSSEEEEEEC-----------------------TTTSSCEEEEEETTCCC-CEECC----SSSSEEEEEECT-
T ss_pred ceEECC-CCCEEEEEEe-----------------------CCCCcceEEEEECCCCc-eEEee----cCCCccceEECC-
Confidence 999999 7778887773 004556666554 444 33443 334589999999
Q ss_pred CCeeEE-eeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEee-cCCe
Q 016185 211 DIYRIA-SCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKS-VDNE 286 (394)
Q Consensus 211 ~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~-~dg~ 286 (394)
+++.|+ +++.++.+++|+++... .....+..+...+.++.|+ +++++.++ .++.
T Consensus 139 dg~~l~~~~~~~~~~~l~~~~~~~----------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 196 (297)
T 2ojh_A 139 DGKSFTYCGIRDQVFDIYSMDIDS----------------------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQ 196 (297)
T ss_dssp TSSEEEEEEEETTEEEEEEEETTT----------------------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred CCCEEEEEECCCCceEEEEEECCC----------------------CcceEcccCCCccccceECCCCCEEEEEecCCCC
Confidence 777666 78889999999975411 1234555677889999997 66666655 5899
Q ss_pred EEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCC-----------CcEEEEEecCCCceeeEE
Q 016185 287 IVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE-----------GKIFVWELQSSPPVLIAR 355 (394)
Q Consensus 287 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~ 355 (394)
+++|++..... .+..+..+...+..++|+|++ .+|++++.+ +.|++||+.+++...+..
T Consensus 197 ~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 197 MQIWRVRVDGS--------SVERITDSAYGDWFPHPSPSG--DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp CEEEEEETTSS--------CEEECCCCSEEEEEEEECTTS--SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred ccEEEECCCCC--------CcEEEecCCcccCCeEECCCC--CEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 99998863221 344555666778899999999 577777655 569999999886555655
Q ss_pred eccCCccCCeeEEEeccCCCEEEEeccCC
Q 016185 356 LSHAQSKSPIRQTAMSYDGSTILSCCEDG 384 (394)
Q Consensus 356 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 384 (394)
+. +|...+..++|+|++++|++++.|.
T Consensus 267 ~~--~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 267 LF--GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EE--ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cC--CCCcccccceECCCCCEEEEEEecc
Confidence 55 6667899999999999999887664
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=1.4e-24 Score=187.35 Aligned_cols=275 Identities=11% Similarity=-0.006 Sum_probs=185.0
Q ss_pred eEEEEecCCc-EEEEEcCCCceeEEeeecccCCccc-ceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEec
Q 016185 50 NVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEE-SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH 127 (394)
Q Consensus 50 ~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 127 (394)
+++++++.++ |.+||+.+++.+..+... +.. .+..++|+ |+|+.+++++..++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~~s--~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIA----DAGPTPMVPMVA--PGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECT----TCTTCCCCEEEC--TTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcC----CCCCCccceEEc--CCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 4678877777 999999998887776521 111 35567777 999845567777899999999999888777632
Q ss_pred -----CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeec---cCCcEEEEEecCCcEEEEeeccCCCc
Q 016185 128 -----GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVG---QDESVRLWNVQTGICILIFAGAGGHR 199 (394)
Q Consensus 128 -----~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~ 199 (394)
...+..++|+| +++.+++++.... ..... .++.|.+||+.+++....+. ..
T Consensus 76 ~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~----------------~~~~~~~~~~~~i~v~d~~~~~~~~~~~----~~ 134 (337)
T 1pby_B 76 TPEERVKSLFGAALSP-DGKTLAIYESPVR----------------LELTHFEVQPTRVALYDAETLSRRKAFE----AP 134 (337)
T ss_dssp BTTEEEECTTCEEECT-TSSEEEEEEEEEE----------------ECSSCEEECCCEEEEEETTTTEEEEEEE----CC
T ss_pred CcccccccccceEECC-CCCEEEEEecccc----------------cccccccccCceEEEEECCCCcEEEEEe----CC
Confidence 22678899999 6666766641000 00000 16999999999988887776 34
Q ss_pred ccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEE
Q 016185 200 NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFIL 279 (394)
Q Consensus 200 ~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~ 279 (394)
..+.+++|+| ++++|+++ ++.|.+||+.+++.......... ...+ .+..+++.++
T Consensus 135 ~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~---------------------~~~~-~~s~dg~~l~ 189 (337)
T 1pby_B 135 RQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW---------------------EAET-YAQPDVLAVW 189 (337)
T ss_dssp SSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTT---------------------TTTT-BCCCBCCCCC
T ss_pred CCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeecccc---------------------CCCc-eeCCCccEEe
Confidence 5678899999 88877777 68999999988543211110000 0000 0011122222
Q ss_pred Eee--------------cCC----------eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEe
Q 016185 280 SKS--------------VDN----------EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 280 ~~~--------------~dg----------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 335 (394)
..+ .++ .|.+||+.+++. ....+..+...+..++|+|++ .+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--------~~~~~~~~~~~~~~~~~s~dg--~~l~~~- 258 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM--------AMREVRIMDVFYFSTAVNPAK--TRAFGA- 258 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE--------EEEEEEECSSCEEEEEECTTS--SEEEEE-
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc--------eEeecCCCCCceeeEEECCCC--CEEEEe-
Confidence 211 111 578999987752 112233344567889999999 567776
Q ss_pred CCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 336 REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
++.|++||+.+++ .+..+.. ...+.+++|+|++++|++++.++.|++||+.+
T Consensus 259 -~~~v~~~d~~~~~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 259 -YNVLESFDLEKNA--SIKRVPL---PHSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp -ESEEEEEETTTTE--EEEEEEC---SSCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred -CCeEEEEECCCCc--CcceecC---CCceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 7999999998874 4444442 14678999999999999999999999999864
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=5.7e-25 Score=210.06 Aligned_cols=282 Identities=13% Similarity=0.061 Sum_probs=202.2
Q ss_pred ccceeEEEEEeeCCCcceEEEEecC-C------cEEEEEcCCCceeEEeeecccCCcc----------------------
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGG-N------RVTVYQCLEGGVIAALQSYVDEDKE---------------------- 83 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~-d------~i~vw~~~~~~~~~~~~~~~~~~~~---------------------- 83 (394)
...|.+++||| +|++|++++. + .|++||+.+++....+.... +.
T Consensus 36 ~~~~~~~~~Sp----dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 36 GPTLMKPKVAP----DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKV---VLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp CCCCEEEEECT----TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGG---TC--------------------CC
T ss_pred CCCCCCceEec----CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhh---cccccccccchhhhhhhhhhhccc
Confidence 45799999999 7999998876 4 39999999888765554221 11
Q ss_pred cceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCe--eEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 84 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEK--LHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 84 ~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
..+..++|+ |||+ +|++++. +.|.+||+.+++ ....+..|...+..++|+| +++.|+.++
T Consensus 109 ~~v~~~~~S--pDg~-~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~------------- 170 (741)
T 2ecf_A 109 TGIVDYQWS--PDAQ-RLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR------------- 170 (741)
T ss_dssp EESCCCEEC--TTSS-EEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-------------
T ss_pred cCcceeEEC--CCCC-EEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-------------
Confidence 236677777 9999 8888776 999999998873 4455667888899999999 778888877
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCccc----------------EEEEEecCCCCeeEEeeccCC---
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNE----------------VLSVDFHPSDIYRIASCGMDN--- 222 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~----------------i~~~~~~~~~~~~l~s~~~dg--- 222 (394)
++.|++||+.+++...... .+... +.+++|+| |++.|++++.|+
T Consensus 171 -------------~~~i~~~d~~~g~~~~~~~---~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~ 233 (741)
T 2ecf_A 171 -------------GRNLWVIDLASGRQMQLTA---DGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPV 233 (741)
T ss_dssp -------------TTEEEEEETTTTEEEECCC---CCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTS
T ss_pred -------------CCcEEEEecCCCCEEEecc---CCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCC
Confidence 6699999998887665443 23322 47899999 999999987765
Q ss_pred ------------------------------cEEEEEccc-cceeeccccccCCCCCCCCccccccceeeeecCCCceEEE
Q 016185 223 ------------------------------TVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN 271 (394)
Q Consensus 223 ------------------------------~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 271 (394)
.|++||+.+ ++.. .+.....|...+..+
T Consensus 234 ~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~---------------------~~~~~~~~~~~~~~~ 292 (741)
T 2ecf_A 234 PVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQ---------------------WIDLGKEQDIYLARV 292 (741)
T ss_dssp CEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCE---------------------EECCCSCSSEEEEEE
T ss_pred ceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceE---------------------EecCCCCcceEEEEE
Confidence 677777765 4310 011111466677777
Q ss_pred EE-eCcEEEEeec-----CCeEEEecCCCCCCCCCCCcceecccccCCCC----CeEEEEEeecCCcceEEEEeCCCcEE
Q 016185 272 RW-LGDFILSKSV-----DNEIVLWEPKMKEQSPGEGTADILQKYPVPEC----DIWFIKFSCDFHYNAAAIGNREGKIF 341 (394)
Q Consensus 272 ~~-~~~~l~~~~~-----dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~l~~~~~dg~i~ 341 (394)
+| +|++|+.++. +..|.+||+.+++. ...+..+.. .+..++|+|++ .++++++.||.++
T Consensus 293 ~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~---------~~~~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~g~~~ 361 (741)
T 2ecf_A 293 NWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQ---------RVLAHETSPTWVPLHNSLRFLDDG--SILWSSERTGFQH 361 (741)
T ss_dssp EEEETTEEEEEEEETTSSEEEEEEEETTTCCE---------EEEEEEECSSCCCCCSCCEECTTS--CEEEEECTTSSCE
T ss_pred EeCCCCEEEEEEecccCCeEEEEEEECCCCce---------EEEEEcCCCCcCCcCCceEECCCC--eEEEEecCCCccE
Confidence 76 3667776553 67899999988752 122221211 34578999999 5888899999999
Q ss_pred EEEecCCCceeeEEeccCCccCCeeEE-EeccCCCEEEE-eccCC--eEEEEEcC
Q 016185 342 VWELQSSPPVLIARLSHAQSKSPIRQT-AMSYDGSTILS-CCEDG--AIWRWDAI 392 (394)
Q Consensus 342 iwd~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s-~~~dg--~i~iwd~~ 392 (394)
||.+.... . ...+. .+...+..+ .|+|+++.|+. ++.++ .++||++.
T Consensus 362 l~~~~~~~-~-~~~l~--~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 362 LYRIDSKG-K-AAALT--HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp EEEECSSS-C-EEESC--CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred EEEEcCCC-C-eeeee--ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 99887432 2 55555 666778887 59999987764 55555 89999875
No 138
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.1e-23 Score=187.27 Aligned_cols=306 Identities=15% Similarity=0.134 Sum_probs=191.9
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCc----------eeEEeeecccCCcccceEEEEEEEcCCCCcEEE
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGG----------VIAALQSYVDEDKEESFYTVSWACNVDGIPFLV 102 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~ 102 (394)
...++.+++++ ++.++++++.++++||+..... .+........-.+...|.+++|+ |+|+ +|+
T Consensus 36 ~~~~n~lavs~----~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s--pdg~-~la 108 (434)
T 2oit_A 36 KERSSLLAVSN----KYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALS--CDNL-TLS 108 (434)
T ss_dssp CSCCBCEEEET----TTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEEC--TTSC-EEE
T ss_pred CCCccEEEEec----CCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEc--CCCC-EEE
Confidence 44689999998 6788888888889998864211 11111100011345679999888 9999 888
Q ss_pred ----EeecCCeEEEEECCCC--------ee---EEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeecc
Q 016185 103 ----AGGINGIIRVIDVSNE--------KL---HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRS 167 (394)
Q Consensus 103 ----s~~~dg~i~vwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~ 167 (394)
+|+.|+.|++||+.++ +. ...+.+|...|.+++|+|+++.+|++++.
T Consensus 109 v~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~------------------ 170 (434)
T 2oit_A 109 ACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA------------------ 170 (434)
T ss_dssp EEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET------------------
T ss_pred EEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC------------------
Confidence 8899999999998654 22 34455799999999999965899999999
Q ss_pred ceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCC
Q 016185 168 NCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPS 247 (394)
Q Consensus 168 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 247 (394)
||+|++||++++....... +|...|.+++|+| ++++|++|+.||.|++||++. +......
T Consensus 171 -------Dg~v~iwD~~~~~~~~~~~---~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~~-~~~~~~~-------- 230 (434)
T 2oit_A 171 -------DGSIAVLQVTETVKVCATL---PSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPTL-QEKKVIP-------- 230 (434)
T ss_dssp -------TSCEEEEEESSSEEEEEEE---CGGGCEEEEEECT-TSSCEEEEETTSCEEEECTTC-CEEEEEC--------
T ss_pred -------CCeEEEEEcCCCcceeecc---CCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccCC-ccccccc--------
Confidence 9999999999987665555 6899999999999 899999999999999999983 1100000
Q ss_pred CCCccccccceeeeecCCCceEEEEEeC--cEEEE-eecCC------eEEEecCCCCCCCCCC---CcceecccccCCCC
Q 016185 248 KFPTKYVQFPVFIASVHSNYVDCNRWLG--DFILS-KSVDN------EIVLWEPKMKEQSPGE---GTADILQKYPVPEC 315 (394)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~l~~-~~~dg------~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~ 315 (394)
.+......|...+.++.|++ .++++ ...|| .+++|+++..+..... ........+.....
T Consensus 231 --------~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~ 302 (434)
T 2oit_A 231 --------CPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQ 302 (434)
T ss_dssp --------CCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSC
T ss_pred --------CCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcC
Confidence 00000012445789999983 33332 33343 3899999865321110 00111111112222
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc-----------eeeEEeccCCccCCeeEEEec-------------
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP-----------VLIARLSHAQSKSPIRQTAMS------------- 371 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~~~~v~~~~~s------------- 371 (394)
+-..+.+-++.+ .++++.+..+.|.+........ +....+...+....+..+++.
T Consensus 303 ~~~~~~~l~dw~-l~~v~s~~s~dv~vl~~~~~~~~~~~~~~~d~~ra~lP~~~~~~dt~piG~~~d~~~~~~v~~~~~~ 381 (434)
T 2oit_A 303 HHYYLSYIEEWD-LVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNQVEITISDEK 381 (434)
T ss_dssp CCEEEEEEGGGT-EEEEEETTCSBCEEEEECTTSSCEEEEEECGGGCCBCCBCTTSCBCCEEEEEEECCCCCCEEEETTE
T ss_pred cceeeehhccCC-EEEEecCCCCceeEEEecCCCCccEEEeccccccccccCCCCCCCceeeEEEEEccCCceeecCccc
Confidence 333444446663 3445555555566665433211 001111111223334445443
Q ss_pred --cCCCEEEEeccCCeEEEEEcC
Q 016185 372 --YDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 372 --~~~~~l~s~~~dg~i~iwd~~ 392 (394)
|--..|.+-+.||.+..|.+-
T Consensus 382 ~~~p~P~l~~l~~~G~L~~~~~~ 404 (434)
T 2oit_A 382 TLPPAPVLMLLSTDGVLCPFYMI 404 (434)
T ss_dssp EECCCCEEEEEETTSEEEEEEEE
T ss_pred cCCCCCEEEEECCCCEEEEEEEE
Confidence 122578888899999999874
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1e-23 Score=201.41 Aligned_cols=302 Identities=11% Similarity=0.014 Sum_probs=198.7
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCc--eeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGG--VIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIR 111 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~ 111 (394)
..|.+++||| +|++|++++.+.|.+||+.++. ....+. .+...+..++|+ |||+ +|+.++ ++.|+
T Consensus 109 ~~v~~~~~Sp----Dg~~l~~~~~~~i~~~d~~~~~~~~~~~l~-----~~~~~~~~~~~S--PDG~-~la~~~-~~~i~ 175 (741)
T 2ecf_A 109 TGIVDYQWSP----DAQRLLFPLGGELYLYDLKQEGKAAVRQLT-----HGEGFATDAKLS--PKGG-FVSFIR-GRNLW 175 (741)
T ss_dssp EESCCCEECT----TSSEEEEEETTEEEEEESSSCSTTSCCBCC-----CSSSCEEEEEEC--TTSS-EEEEEE-TTEEE
T ss_pred cCcceeEECC----CCCEEEEEeCCcEEEEECCCCCcceEEEcc-----cCCcccccccCC--CCCC-EEEEEe-CCcEE
Confidence 3489999999 8999999988669999998872 333333 356678888888 9999 888876 56999
Q ss_pred EEECCCCeeEEEEEecCCc----------------eeEEEEcCCCCcEEEEcee---eeEEeeccceeeeeee-----c-
Q 016185 112 VIDVSNEKLHKSFVGHGDS----------------INEIRTQPLKPSLVVSASK---VIIISSLSLICLLLFI-----R- 166 (394)
Q Consensus 112 vwd~~~~~~~~~~~~~~~~----------------v~~~~~~~~~~~~l~s~~~---~i~~~~~~~~~~~~~~-----~- 166 (394)
+||+.+++..+....+... +..++|+| +++.|++++. ....+... ..... .
T Consensus 176 ~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~---~~~p~~~~~~~~ 251 (741)
T 2ecf_A 176 VIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRY---EVYADRTDVIEQ 251 (741)
T ss_dssp EEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEE---EECSSCEEEEEE
T ss_pred EEecCCCCEEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecC---CCCCCcccceEe
Confidence 9999988766544434332 47899999 6677777654 00000000 00000 0
Q ss_pred cceeeecc--CCcEEEEEecC-CcEEEEeeccCCCcccEEEEEecCCCCeeEEeecc-----CCcEEEEEccccceeecc
Q 016185 167 SNCLRVGQ--DESVRLWNVQT-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-----DNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 167 ~~~~~~~~--d~~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-----dg~v~iwd~~~~~~~~~~ 238 (394)
..-..+.. ...|.+||+.+ ++....... ..|...+..++| | +++.|++++. +..|++||+.+++.
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~---- 324 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQAQTQWIDLG-KEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQ---- 324 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTCCCEEECCC-SCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCE----
T ss_pred ecCCCCCCCCeeEEEEEECCCCCceEEecCC-CCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCce----
Confidence 00000111 11788889988 776554321 137788999999 9 8888886653 67899999988432
Q ss_pred ccccCCCCCCCCccccccceeeeecCCC----ceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC
Q 016185 239 SFTWTDLPSKFPTKYVQFPVFIASVHSN----YVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV 312 (394)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~ 312 (394)
......+.. .+..+.|+ |+++++++.||.++||.+.... ....+..
T Consensus 325 -------------------~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~---------~~~~l~~ 376 (741)
T 2ecf_A 325 -------------------RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG---------KAAALTH 376 (741)
T ss_dssp -------------------EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS---------CEEESCC
T ss_pred -------------------EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC---------Ceeeeee
Confidence 222222322 34567786 7788888999988888765321 1334455
Q ss_pred CCCCeEEE-EEeecCCcceEEEEeCCC--cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC----Ce
Q 016185 313 PECDIWFI-KFSCDFHYNAAAIGNREG--KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED----GA 385 (394)
Q Consensus 313 ~~~~i~~~-~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~ 385 (394)
+...+..+ .|+|+++ .++++++.++ .+++|++.... .....+. . ...+..++|+|||++|+....+ ..
T Consensus 377 ~~~~v~~~~~~s~dg~-~l~~~~~~~~~~~~~l~~~~~~g-~~~~~l~--~-~~~~~~~~~spdg~~l~~~~~~~~~p~~ 451 (741)
T 2ecf_A 377 GNWSVDELLAVDEKAG-LAYFRAGIESARESQIYAVPLQG-GQPQRLS--K-APGMHSASFARNASVYVDSWSNNSTPPQ 451 (741)
T ss_dssp SSSCEEEEEEEETTTT-EEEEEECSSCTTCBEEEEEETTC-CCCEECC--C-SCSEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred cceEEEeEeEEeCCCC-EEEEEEeCCCCceEEEEEEEcCC-CCeeecc--c-CCCceEEEECCCCCEEEEEecCCCCCCe
Confidence 66678777 5999995 3445666666 89999997532 2344554 2 4568899999999998866443 46
Q ss_pred EEEEEcC
Q 016185 386 IWRWDAI 392 (394)
Q Consensus 386 i~iwd~~ 392 (394)
+++|+..
T Consensus 452 ~~l~~~~ 458 (741)
T 2ecf_A 452 IELFRAN 458 (741)
T ss_dssp EEEEETT
T ss_pred EEEEEcC
Confidence 8888864
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.93 E-value=7.8e-24 Score=201.05 Aligned_cols=305 Identities=10% Similarity=0.052 Sum_probs=194.7
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVI 113 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vw 113 (394)
..|.+++||| ++.++++ .++.|++||+.+++...... +...+..++|+ |||+ .|+++ .++.|++|
T Consensus 82 ~~v~~~~~sp----d~~~~~~-~~~~i~~~d~~~~~~~~l~~------~~~~~~~~~~S--pdG~-~la~~-~~~~i~v~ 146 (706)
T 2z3z_A 82 FPSFRTLDAG----RGLVVLF-TQGGLVGFDMLARKVTYLFD------TNEETASLDFS--PVGD-RVAYV-RNHNLYIA 146 (706)
T ss_dssp CCCEEEEETT----TTEEEEE-ETTEEEEEETTTTEEEEEEC------CTTCCTTCEEC--TTSS-EEEEE-ETTEEEEE
T ss_pred cCceeEEECC----CCeEEEE-ECCEEEEEECCCCceEEccC------CcccccCCcCC--CCCC-EEEEE-ECCeEEEE
Confidence 5699999999 6444444 44559999998876543332 34456677887 9999 77774 68999999
Q ss_pred ECCC-----CeeEEEEEecCCc--------------eeEEEEcCCCCcEEEEcee------eeEEeeccceeeeeeeccc
Q 016185 114 DVSN-----EKLHKSFVGHGDS--------------INEIRTQPLKPSLVVSASK------VIIISSLSLICLLLFIRSN 168 (394)
Q Consensus 114 d~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~~l~s~~~------~i~~~~~~~~~~~~~~~~~ 168 (394)
|+.+ ++..+....+... +.++.|+| +++.|++++. .+.+...............
T Consensus 147 ~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y 225 (706)
T 2z3z_A 147 RGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYY 225 (706)
T ss_dssp ECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECC
T ss_pred ecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeC
Confidence 9988 7765544433332 48899999 7788877762 0000000000000000000
Q ss_pred eee--eccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCC-----cEEEEEccccceeeccccc
Q 016185 169 CLR--VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-----TVKIWSMKEFWTYVEKSFT 241 (394)
Q Consensus 169 ~~~--~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~ 241 (394)
-.. ...+..|.+||+.+++...... ...|...+.+++|+| +++.|++++.++ .|++||+.+++..
T Consensus 226 ~~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~------ 297 (706)
T 2z3z_A 226 PMAGTPSHHVTVGIYHLATGKTVYLQT-GEPKEKFLTNLSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFV------ 297 (706)
T ss_dssp CBTTSCCCEEEEEEEETTTTEEEECCC-CSCTTCEEEEEEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEE------
T ss_pred CCCCCCCCeeEEEEEECCCCceEeecc-CCCCceeEeeEEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCcee------
Confidence 000 1135789999998887654432 114667899999999 999888877765 8999999885210
Q ss_pred cCCCCCCCCccccccceeeeecCCC---ceEEEEE----eCcEEEEeecCCeEEEecCC-CCCCCCCCCcceecccccCC
Q 016185 242 WTDLPSKFPTKYVQFPVFIASVHSN---YVDCNRW----LGDFILSKSVDNEIVLWEPK-MKEQSPGEGTADILQKYPVP 313 (394)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~----~~~~l~~~~~dg~i~~~d~~-~~~~~~~~~~~~~~~~~~~~ 313 (394)
..+.. ..+.. .+.++.| +|++++++..|+.+++|++. ++. .+..+..+
T Consensus 298 --------------~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~---------~~~~l~~~ 353 (706)
T 2z3z_A 298 --------------RTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR---------LIRQVTKG 353 (706)
T ss_dssp --------------EEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC---------EEEECCCS
T ss_pred --------------eEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC---------EEEecCCC
Confidence 00110 11111 2345566 35688888899999999876 222 34555566
Q ss_pred CCCeEE-EEEeecCCcceEEEEeCCC----cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC----C
Q 016185 314 ECDIWF-IKFSCDFHYNAAAIGNREG----KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED----G 384 (394)
Q Consensus 314 ~~~i~~-~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g 384 (394)
...+.. ++|+|+++ .++++++.++ .|+.||+.+++ ...+. +...+..++|+|||++|+..+.+ +
T Consensus 354 ~~~v~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l~---~~~~~~~~~~spdg~~l~~~~~~~~~p~ 426 (706)
T 2z3z_A 354 EWEVTNFAGFDPKGT-RLYFESTEASPLERHFYCIDIKGGK---TKDLT---PESGMHRTQLSPDGSAIIDIFQSPTVPR 426 (706)
T ss_dssp SSCEEEEEEECTTSS-EEEEEESSSCTTCBEEEEEETTCCC---CEESC---CSSSEEEEEECTTSSEEEEEEECSSCSC
T ss_pred CeEEEeeeEEcCCCC-EEEEEecCCCCceEEEEEEEcCCCC---ceecc---CCCceEEEEECCCCCEEEEEecCCCCCc
Confidence 667776 79999995 3444555555 56666666553 23333 34678999999999998876443 5
Q ss_pred eEEEEEcCC
Q 016185 385 AIWRWDAIP 393 (394)
Q Consensus 385 ~i~iwd~~~ 393 (394)
.|++||+.+
T Consensus 427 ~i~l~d~~~ 435 (706)
T 2z3z_A 427 KVTVTNIGK 435 (706)
T ss_dssp EEEEEESSS
T ss_pred EEEEEECCC
Confidence 699999864
No 141
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=4e-24 Score=203.65 Aligned_cols=281 Identities=10% Similarity=0.015 Sum_probs=187.5
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC-----
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN----- 107 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d----- 107 (394)
..+.+++|+| +|+++++ +.++ |++||+.+++....+..+. .....+..++|+ |||+ +|++++.+
T Consensus 17 ~~~~~~~~sp----dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~--~~~~~v~~~~~S--pDg~-~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 17 IHDPEAKWIS----DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKK--IESLRAIRYEIS--PDRE-YALFSYNVEPIYQ 86 (723)
T ss_dssp CCCCCCCBSS----SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTT--TTTTTCSEEEEC--TTSS-EEEEEESCCCCSS
T ss_pred ccccccEEcC----CCcEEEE-eCCCCEEEEECCCCcEEEEecccc--ccccccceEEEC--CCCC-EEEEEecCcccee
Confidence 3478899999 7887776 5565 9999999988766665211 011247788877 9999 88888764
Q ss_pred ----CeEEEEECCCCeeEEEEE---ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEE
Q 016185 108 ----GIIRVIDVSNEKLHKSFV---GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRL 180 (394)
Q Consensus 108 ----g~i~vwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~v 180 (394)
+.+.+||+.+++. ..+. .|...+..++|+| +++.|+.++ ++.|++
T Consensus 87 ~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~--------------------------~~~i~~ 138 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIF--------------------------ENNIYY 138 (723)
T ss_dssp SCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEE--------------------------TTEEEE
T ss_pred ecceeeEEEEECCCCce-EeccCCccccccccccEECC-CCCEEEEEE--------------------------CCeEEE
Confidence 7889999998876 3343 3444588999999 778888887 679999
Q ss_pred EEecCCcEEEEeeccCCCccc------------------EEEEEecCCCCeeEEeeccCC--------------------
Q 016185 181 WNVQTGICILIFAGAGGHRNE------------------VLSVDFHPSDIYRIASCGMDN-------------------- 222 (394)
Q Consensus 181 wd~~~~~~~~~~~~~~~~~~~------------------i~~~~~~~~~~~~l~s~~~dg-------------------- 222 (394)
||+.+++...... .+... +.+++|+| |++.|++++.|+
T Consensus 139 ~~~~~g~~~~~~~---~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (723)
T 1xfd_A 139 CAHVGKQAIRVVS---TGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVK 214 (723)
T ss_dssp ESSSSSCCEEEEC---CCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCE
T ss_pred EECCCCceEEEec---CCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcce
Confidence 9999888776655 33332 37899999 999888887553
Q ss_pred --------------cEEEEEccccceeeccccccCCCCCCCCccccccceeeeec------CCCceEEEEEe--CcEEEE
Q 016185 223 --------------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV------HSNYVDCNRWL--GDFILS 280 (394)
Q Consensus 223 --------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~~--~~~l~~ 280 (394)
.|++||+.+++ ....+.. +...+..++|+ |+++++
T Consensus 215 ~~~~~~~G~~~~~~~l~~~d~~~~~-----------------------~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 215 PYHYPKAGSENPSISLHVIGLNGPT-----------------------HDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EEECCBTTSCCCEEEEEEEESSSSC-----------------------CCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred eccCCCCCCCCCeeEEEEEECCCCc-----------------------eeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 56666665522 1122222 35678889998 667766
Q ss_pred eec----CCeEEEecCCCCCCCCCCCcceecccccC-CCCCe----EEEEEeecCCcceEEE--EeCCC------cEEEE
Q 016185 281 KSV----DNEIVLWEPKMKEQSPGEGTADILQKYPV-PECDI----WFIKFSCDFHYNAAAI--GNREG------KIFVW 343 (394)
Q Consensus 281 ~~~----dg~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~i----~~~~~~~~~~~~~l~~--~~~dg------~i~iw 343 (394)
... +..|.+||+.+++. ...+.. +...+ ..++|+|+++ .|+. +..++ .|++|
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~---------~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~~~~l~~~ 340 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVC---------TKKHEDESEAWLHRQNEEPVFSKDGR--KFFFIRAIPQGGRGKFYHITVS 340 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCE---------EEEEEEECSSCCCCCCCCCEECTTSC--SEEEEEEECCSSSSCEEEEEEE
T ss_pred EEcCCCCeEEEEEEeCCCCcc---------eEEEEeccCCEEeccCCCceEcCCCC--eEEEEEecccCCCcceeEEEEE
Confidence 543 46799999987752 111111 11222 2679999995 3443 55677 46666
Q ss_pred E-ecCCCceeeEEeccCCccCCeeE-EEeccCCCEEEEeccC---CeEEEEEcC
Q 016185 344 E-LQSSPPVLIARLSHAQSKSPIRQ-TAMSYDGSTILSCCED---GAIWRWDAI 392 (394)
Q Consensus 344 d-~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---g~i~iwd~~ 392 (394)
| ...++......+. .+...+.. ++|+|||+.|+..+.+ +.++||++.
T Consensus 341 d~~~~~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 341 SSQPNSSNDNIQSIT--SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CSSCCSSSCCCCBSC--CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred eccCCCCccceeEee--cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 6 3333200123333 22234544 6999999999866554 789999975
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=6.1e-23 Score=202.56 Aligned_cols=282 Identities=11% Similarity=0.037 Sum_probs=211.1
Q ss_pred CccceeEEEEE-eeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCccc-ceEEEEEEEcCCCCcEEEEeecCCe
Q 016185 32 GKRPLYAVVFN-FIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEE-SFYTVSWACNVDGIPFLVAGGINGI 109 (394)
Q Consensus 32 h~~~v~~i~~s-p~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~s~~~dg~ 109 (394)
|...+.+++|+ | +|+.||+++.+.+.+|+...++... +. .+.. .+..++|+ +|+ .|+.++.++.
T Consensus 294 ~~~~v~~~~~S~p----dG~~la~~~~~~i~~~~~~~~~~~~-~~-----~~~~~~~~~~~~s---dg~-~l~~~s~~~~ 359 (1045)
T 1k32_A 294 SIPSKFAEDFSPL----DGDLIAFVSRGQAFIQDVSGTYVLK-VP-----EPLRIRYVRRGGD---TKV-AFIHGTREGD 359 (1045)
T ss_dssp ECGGGGEEEEEEC----GGGCEEEEETTEEEEECTTSSBEEE-CS-----CCSCEEEEEECSS---SEE-EEEEEETTEE
T ss_pred cccccceeeecCC----CCCEEEEEEcCEEEEEcCCCCceEE-cc-----CCCcceEEeeeEc---CCC-eEEEEECCCc
Confidence 45579999999 9 7999999886669999988776432 32 3444 66666665 787 7888887888
Q ss_pred EE-EEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcE
Q 016185 110 IR-VIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGIC 188 (394)
Q Consensus 110 i~-vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~ 188 (394)
+. +|++..++.. .+.+|...+..++|+| ++..|++++. ++.|++||+.+++.
T Consensus 360 l~~~~d~~~~~~~-~l~~~~~~~~~~~~Sp-DG~~la~~~~-------------------------~~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 360 FLGIYDYRTGKAE-KFEENLGNVFAMGVDR-NGKFAVVAND-------------------------RFEIMTVDLETGKP 412 (1045)
T ss_dssp EEEEEETTTCCEE-ECCCCCCSEEEEEECT-TSSEEEEEET-------------------------TSEEEEEETTTCCE
T ss_pred eEEEEECCCCCce-EecCCccceeeeEECC-CCCEEEEECC-------------------------CCeEEEEECCCCce
Confidence 88 9998876654 3447888899999999 7889999888 99999999999998
Q ss_pred EEEeeccCCCcccEEEEEecCCCCeeEEeeccCC----------cEEEEEccccceeeccccccCCCCCCCCccccccce
Q 016185 189 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN----------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPV 258 (394)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg----------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (394)
...+. +|...+.+++|+| ++++|++++.++ .|++||+.+++ .
T Consensus 413 ~~~~~---~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~------------------------~ 464 (1045)
T 1k32_A 413 TVIER---SREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK------------------------I 464 (1045)
T ss_dssp EEEEE---CSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE------------------------E
T ss_pred EEecc---CCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc------------------------E
Confidence 88776 6888999999999 999888887654 89999998732 4
Q ss_pred eeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCC----------------------------------CCCC
Q 016185 259 FIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQS----------------------------------PGEG 302 (394)
Q Consensus 259 ~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~----------------------------------~~~~ 302 (394)
..+..|...+..+.|+ |++|+.++.++...+|+....... ...+
T Consensus 465 ~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g 544 (1045)
T 1k32_A 465 FAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLND 544 (1045)
T ss_dssp EECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTT
T ss_pred EEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccC
Confidence 4556677778889997 788998888877777765432110 0000
Q ss_pred cceecccccCCCCCeEEEEEeecCCcceEEE-------------EeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEE
Q 016185 303 TADILQKYPVPECDIWFIKFSCDFHYNAAAI-------------GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTA 369 (394)
Q Consensus 303 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~-------------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 369 (394)
....+..+..+...+..++++|++ .++++ ......|.+||+.+++. ..+. ..+..++
T Consensus 545 ~~~~~~~l~~~~~~~~~~~~s~dg--~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~-----~~v~~~~ 614 (1045)
T 1k32_A 545 MYKRSSPINVDPGDYRMIIPLESS--ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV---TEVK-----NNLTDLR 614 (1045)
T ss_dssp GGGGCEECSCCCBCEEEEEECSSE--EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE---EEEE-----EEEEEEE
T ss_pred HhHceEEcCCCCCChhheEEcCCC--eEEEEecccCcccccccccCCCceEEEEECCCCcE---EEee-----cCcceEE
Confidence 011223344566778999999998 55664 12345788888887752 2222 4588899
Q ss_pred eccCCCEEEEeccCCeEEEEEcCC
Q 016185 370 MSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 370 ~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
|||||++|++++.+ .|++||+.+
T Consensus 615 ~S~DG~~l~~~~~~-~i~~~d~~~ 637 (1045)
T 1k32_A 615 LSADRKTVMVRKDD-GKIYTFPLE 637 (1045)
T ss_dssp ECTTSCEEEEEETT-SCEEEEESS
T ss_pred ECCCCCEEEEEcCC-cEEEEeCcc
Confidence 99999999999866 899999864
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=2e-21 Score=168.36 Aligned_cols=269 Identities=10% Similarity=0.036 Sum_probs=174.3
Q ss_pred EEEEEcC--CCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec--CCeEEEEECCCCe--eEEEEEecCCceeE
Q 016185 60 VTVYQCL--EGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI--NGIIRVIDVSNEK--LHKSFVGHGDSINE 133 (394)
Q Consensus 60 i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~--~~~~~~~~~~~v~~ 133 (394)
|.+|++. +++. ..+... .+......++|+ |+|+ +++++.. ++.|.+|++.+++ .+..+..+...+..
T Consensus 18 i~v~~~d~~tg~~-~~~~~~---~~~~~p~~~a~s--pdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 18 IYQGTLDTTAKTL-TNDGLL---AATQNPTYLALS--AKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp EEEEEEETTTTEE-EEEEEE---EECSCCCCEEEC--TTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred EEEEEEcCCCCeE-EEeeee---eccCCcceEEEc--cCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 7777665 3443 222211 123445557777 9998 5555543 7899999997665 44555567788999
Q ss_pred EEEcCCCCcEEEEce-eeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC-Cc--EEEEeeccC------CCcccEE
Q 016185 134 IRTQPLKPSLVVSAS-KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT-GI--CILIFAGAG------GHRNEVL 203 (394)
Q Consensus 134 ~~~~~~~~~~l~s~~-~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~-~~--~~~~~~~~~------~~~~~i~ 203 (394)
++|+| ++++|++++ . ++.|.+|++.. +. .+..+.... .+...+.
T Consensus 91 ~a~sp-dg~~l~~~~~~-------------------------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~ 144 (347)
T 3hfq_A 91 VAVDE-ARQLVYSANYH-------------------------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH 144 (347)
T ss_dssp EEEET-TTTEEEEEETT-------------------------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE
T ss_pred EEECC-CCCEEEEEeCC-------------------------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce
Confidence 99999 666666665 6 89999999963 33 233332100 0123588
Q ss_pred EEEecCCCCeeEEeeccCCcEEEEEccc-cceeeccccccCCCCCCCCccccccceeeeecC-CCceEEEEEe--CcEEE
Q 016185 204 SVDFHPSDIYRIASCGMDNTVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH-SNYVDCNRWL--GDFIL 279 (394)
Q Consensus 204 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~--~~~l~ 279 (394)
+++|+| +++++++...++.|++|++.. ++. ........+ ......++|+ |++++
T Consensus 145 ~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~---------------------~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 145 YTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQL---------------------SEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEECT-TSCEEEEETTTTEEEEEEECTTSCE---------------------EEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred EEEECC-CCcEEEEeCCCCEEEEEEECCCCcE---------------------EEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 999999 888777777789999999983 211 011111222 2356678887 66555
Q ss_pred E-eecCCeEEEecCCCCCCCCCCCcceecccccCC------CCCeEEEEEeecCCcceE-EEEeCCCcEEEEEecC-CCc
Q 016185 280 S-KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP------ECDIWFIKFSCDFHYNAA-AIGNREGKIFVWELQS-SPP 350 (394)
Q Consensus 280 ~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~-~~~ 350 (394)
+ ...++.|.+|++..... ....+...... ...+..++|+|+++ +| ++...++.|.+|++.. +..
T Consensus 203 v~~~~~~~v~v~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~--~l~v~~~~~~~v~v~~~~~~g~~ 275 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTG-----AFTQLGIVKTIPADYTAHNGAAAIRLSHDGH--FLYVSNRGYNTLAVFAVTADGHL 275 (347)
T ss_dssp EEETTTTEEEEEEEETTTT-----EEEEEEEEESSCTTCCSCCEEEEEEECTTSC--EEEEEEETTTEEEEEEECGGGCE
T ss_pred EEeCCCCEEEEEEecCCCC-----ceEEeeeeeecCCCCCCCCcceeEEECCCCC--EEEEEeCCCCEEEEEEECCCCcE
Confidence 4 56789999999875210 11112222111 13588899999994 45 5666789999999973 333
Q ss_pred eeeEEeccCCccCCeeEEEeccCCCEEEEecc-CCeEEEEEcC
Q 016185 351 VLIARLSHAQSKSPIRQTAMSYDGSTILSCCE-DGAIWRWDAI 392 (394)
Q Consensus 351 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~ 392 (394)
..+..+. .+...+..++|+|||++|++++. ++.|.+|++.
T Consensus 276 ~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 276 TLIQQIS--TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEE--CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeEEEe--cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 4455555 44567889999999998888775 4899999664
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=2.8e-22 Score=173.80 Aligned_cols=294 Identities=11% Similarity=-0.045 Sum_probs=178.6
Q ss_pred EEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC
Q 016185 39 VVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN 117 (394)
Q Consensus 39 i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 117 (394)
+++++ ++.++++++.++ |.+||+.+++.+..+... ....+..++|+ |+|+.+++++..++.|.+||+.+
T Consensus 5 ~~~~~----~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~s--~dg~~~~v~~~~~~~i~~~d~~t 74 (349)
T 1jmx_B 5 PALKA----GHEYMIVTNYPNNLHVVDVASDTVYKSCVMP----DKFGPGTAMMA--PDNRTAYVLNNHYGDIYGIDLDT 74 (349)
T ss_dssp CCCCT----TCEEEEEEETTTEEEEEETTTTEEEEEEECS----SCCSSCEEEEC--TTSSEEEEEETTTTEEEEEETTT
T ss_pred ccccC----CCEEEEEeCCCCeEEEEECCCCcEEEEEecC----CCCCCceeEEC--CCCCEEEEEeCCCCcEEEEeCCC
Confidence 45555 678888888877 999999999887776631 11135567776 99984455666789999999999
Q ss_pred CeeEEEEEecC------CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcE---
Q 016185 118 EKLHKSFVGHG------DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGIC--- 188 (394)
Q Consensus 118 ~~~~~~~~~~~------~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~--- 188 (394)
++....+..+. ..+..++|+| +++.+++++.....+. . .-+..++.|.+||+.+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~-----------~--~~~~~~~~i~~~d~~~~~~~~~ 140 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLN-----------D--HYVVKPPRLEVFSTADGLEAKP 140 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECS-----------S--CEEECCCEEEEEEGGGGGGBCC
T ss_pred CcEEEEEEcccccccccccccceEECC-CCCEEEEEcccccccc-----------c--ccccCCCeEEEEECCCccccce
Confidence 98887776332 2378999999 7778888776000000 0 0000028999999988543
Q ss_pred EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCC--
Q 016185 189 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN-- 266 (394)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 266 (394)
+..+. +...+.+++|+| +++ +++++. .|.+||+.+++............+....... ..+........
T Consensus 141 ~~~~~----~~~~~~~~~~s~-dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 210 (349)
T 1jmx_B 141 VRTFP----MPRQVYLMRAAD-DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDV--LYFWPHQSPRHEF 210 (349)
T ss_dssp SEEEE----CCSSCCCEEECT-TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBC--CCCCCCCCTTCEE
T ss_pred eeecc----CCCcccceeECC-CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccc--eeeecCCCcceeE
Confidence 33443 344688999999 888 555543 4999999885533211111000000000000 00000000000
Q ss_pred -ceEEEEEe--C-----------cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEee-cCCcceE
Q 016185 267 -YVDCNRWL--G-----------DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC-DFHYNAA 331 (394)
Q Consensus 267 -~i~~~~~~--~-----------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~l 331 (394)
....+.+. + .++.....++.+++|++. .....+..++|+| ++ .++
T Consensus 211 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~sp~dg--~~l 270 (349)
T 1jmx_B 211 SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA------------------DLTELYFTGLRSPKDP--NQI 270 (349)
T ss_dssp EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE------------------ECSSCEEEEEECSSCT--TEE
T ss_pred EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc------------------cCCCcceeeEecCCCC--CEE
Confidence 11122222 0 111122233444444332 2344678899999 88 567
Q ss_pred EEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 332 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 332 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+++ ++.|++||+.+++ .+..+.. ...+.+++|+|++++|++++.++.|++||+++
T Consensus 271 ~~~--~~~v~~~d~~~~~--~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 271 YGV--LNRLAKYDLKQRK--LIKAANL---DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEE--ESEEEEEETTTTE--EEEEEEC---SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred EEE--cCeEEEEECccCe--EEEEEcC---CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 776 8899999998874 4444442 13577899999999999888999999999865
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=9.1e-22 Score=170.16 Aligned_cols=298 Identities=11% Similarity=0.069 Sum_probs=184.9
Q ss_pred CCceeeeeccc-ccccceeeeeccCccceeEEEEEeeCCCcceEEEEecCC-c-EEEEEcC--CCceeEEeeecccCCcc
Q 016185 9 EPLVGSLTPSK-KREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGN-R-VTVYQCL--EGGVIAALQSYVDEDKE 83 (394)
Q Consensus 9 ~~~~~~~~~~~-~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d-~-i~vw~~~--~~~~~~~~~~~~~~~~~ 83 (394)
.+....+.... ....+.... ..|...+.+++|+| ++++|++++.+ + |.+|++. +++. ..+.... . .
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~sp----dg~~l~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~--~-~ 83 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSP----DKRYLYVGVRPEFRVLAYRIAPDDGAL-TFAAESA--L-P 83 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECT----TSSEEEEEETTTTEEEEEEECTTTCCE-EEEEEEE--C-S
T ss_pred CCCeEEEEEECCCCcEEEeee-EecCCCCceEEECC----CCCEEEEeecCCCeEEEEEecCCCCce-eeccccc--c-C
Confidence 34444444332 222333333 34777899999999 78877777764 5 9999987 4442 2222211 1 2
Q ss_pred cceEEEEEEEcCCCCcEEEEe-ecCCeEEEEECC---CCeeEEEEEecCCceeEEEEcCCCCcEEEEce-eeeEEeeccc
Q 016185 84 ESFYTVSWACNVDGIPFLVAG-GINGIIRVIDVS---NEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS-KVIIISSLSL 158 (394)
Q Consensus 84 ~~v~~~~~~~~~~~~~~l~s~-~~dg~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~~i~~~~~~~ 158 (394)
..+..++|+ |+|+ +|+++ ..++.|.+||+. ..+....+..+ ..+.+++|+| +++.+++++ .
T Consensus 84 ~~~~~~~~s--~dg~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~--------- 149 (343)
T 1ri6_A 84 GSLTHISTD--HQGQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISP-DNRTLWVPALK--------- 149 (343)
T ss_dssp SCCSEEEEC--TTSS-EEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECT-TSSEEEEEEGG---------
T ss_pred CCCcEEEEc--CCCC-EEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECC-CCCEEEEecCC---------
Confidence 256677777 9999 66555 458999999994 33444555433 4588999999 555555554 6
Q ss_pred eeeeeeeccceeeeccCCcEEEEEecC-CcEEE----EeeccCCCcccEEEEEecCCCCeeE-EeeccCCcEEEEEcccc
Q 016185 159 ICLLLFIRSNCLRVGQDESVRLWNVQT-GICIL----IFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMKEF 232 (394)
Q Consensus 159 ~~~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~ 232 (394)
++.|.+||+.+ ++... .+.. .....+..++|+| +++++ +++..++.|.+||+...
T Consensus 150 ----------------~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~ 210 (343)
T 1ri6_A 150 ----------------QDRICLFTVSDDGHLVAQDPAEVTT--VEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDP 210 (343)
T ss_dssp ----------------GTEEEEEEECTTSCEEEEEEEEEEC--STTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCT
T ss_pred ----------------CCEEEEEEecCCCceeeeccccccc--CCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCC
Confidence 89999999987 65432 2221 2345788999999 77755 55558999999999641
Q ss_pred ceeeccccccCCCCCCCCccccccceeeeec---CCCceEEEEEe--CcEEE-EeecCCeEEEecCCCCCCCCCCCccee
Q 016185 233 WTYVEKSFTWTDLPSKFPTKYVQFPVFIASV---HSNYVDCNRWL--GDFIL-SKSVDNEIVLWEPKMKEQSPGEGTADI 306 (394)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~--~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~~~ 306 (394)
...... ......+.. ....+..++|+ +++++ +...++.|.+||+..... ....
T Consensus 211 ~g~~~~----------------~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~-----~~~~ 269 (343)
T 1ri6_A 211 HGNIEC----------------VQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGS-----VLSK 269 (343)
T ss_dssp TSCCEE----------------EEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-----CEEE
T ss_pred CCcEEE----------------EeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCC-----ceEE
Confidence 100000 000111111 12356678887 66666 555799999999983210 1123
Q ss_pred cccccCCCCCeEEEEEeecCCcceEEEEe-CCCcEEEEEec--CCCceeeEEeccCCccCCeeEEEeccCCC
Q 016185 307 LQKYPVPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQ--SSPPVLIARLSHAQSKSPIRQTAMSYDGS 375 (394)
Q Consensus 307 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 375 (394)
+..+..+.. +..++|+|++ .+|++++ .++.|.+|++. +++...+..+.. .....+++|.|+.+
T Consensus 270 ~~~~~~~~~-~~~~~~s~dg--~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~---g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 270 EGFQPTETQ-PRGFNVDHSG--KYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV---GQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEECSSS-CCCEEECTTS--SEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC---SSSCCEEEEEEEC-
T ss_pred eeeecCCCc-cceEEECCCC--CEEEEecCCCCeEEEEEEcCCCceeeEcccccc---CCCCeeEEEEcccC
Confidence 334443333 7789999999 4666666 68999999776 443334444442 24567788887654
No 146
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=1.1e-22 Score=188.80 Aligned_cols=268 Identities=11% Similarity=0.052 Sum_probs=190.6
Q ss_pred CccceeEEEEEeeCCCcceEEEEecC-Cc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec---
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGG-NR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI--- 106 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~-d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~--- 106 (394)
+..+|++++|+| ||+.||+++. ++ +.||++.+++. ..+.. .+...+..++|+ || + ++++++.
T Consensus 20 ~~~~~~~~~~~~----DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~----~~~~~~~~~~~s--pd-~-~l~~~~~~~g 86 (582)
T 3o4h_A 20 IAVEKYSLQGVV----DGDKLLVVGFSEGSVNAYLYDGGET-VKLNR----EPINSVLDPHYG--VG-R-VILVRDVSKG 86 (582)
T ss_dssp HHSCEEEEEEEE----TTTEEEEEEEETTEEEEEEEETTEE-EECCS----SCCSEECEECTT--CS-E-EEEEEECSTT
T ss_pred hccchheeecCC----CCCeEEEEEccCCceeEEEEcCCCc-Eeeec----ccccccccccCC--CC-e-EEEEeccCCC
Confidence 366899999999 8999998876 66 99999865544 33331 233577888887 88 6 8887765
Q ss_pred CCeEEEEECCC---CeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEe
Q 016185 107 NGIIRVIDVSN---EKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183 (394)
Q Consensus 107 dg~i~vwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~ 183 (394)
+....+|.+.. +... .+..+ ..+...+|+|++..++++.+. ++.+.+||+
T Consensus 87 ~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~-------------------------~~~~~l~d~ 139 (582)
T 3o4h_A 87 AEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGAT-------------------------EDRVALYAL 139 (582)
T ss_dssp SCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEEC-------------------------SSCEEEEEE
T ss_pred CcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecC-------------------------CCCceEEEc
Confidence 45556655432 2222 33322 234466888854444444444 555669999
Q ss_pred cCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC----CcEEEEEccccceeeccccccCCCCCCCCcccccccee
Q 016185 184 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 259 (394)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (394)
.+++...... +.. .+++|+| |++.|++++.+ +.|++||+.+++ ..
T Consensus 140 ~~g~~~~l~~----~~~--~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~------------------------~~ 188 (582)
T 3o4h_A 140 DGGGLRELAR----LPG--FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGG------------------------LR 188 (582)
T ss_dssp ETTEEEEEEE----ESS--CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCC------------------------CE
T ss_pred cCCcEEEeec----CCC--ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCC------------------------ce
Confidence 9887766554 222 7899999 99999988877 789999998732 33
Q ss_pred eeecCCCceEEEEEe--CcEEEEeecCC--eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEE--------EeecCC
Q 016185 260 IASVHSNYVDCNRWL--GDFILSKSVDN--EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK--------FSCDFH 327 (394)
Q Consensus 260 ~~~~~~~~i~~~~~~--~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~ 327 (394)
.+..|...+..++|+ |+.|+++..++ .|++||+.+++. . .+..+...+..++ |+|++
T Consensus 189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~spdg- 257 (582)
T 3o4h_A 189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV---------E-DLELPSKDFSSYRPTAITWLGYLPDG- 257 (582)
T ss_dssp EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE---------E-ECCCSCSHHHHHCCSEEEEEEECTTS-
T ss_pred EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE---------E-EccCCCcChhhhhhccccceeEcCCC-
Confidence 566788889999998 78899888888 899999988752 2 3444444455555 99999
Q ss_pred cceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCe---EEEEEcC
Q 016185 328 YNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA---IWRWDAI 392 (394)
Q Consensus 328 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~---i~iwd~~ 392 (394)
.++++++.|+.+++|++ ++ ... ...+.+.+++|+ +++++++++.+.. +++||+.
T Consensus 258 -~~~~~~~~~g~~~l~~~--g~--~~~-----~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 258 -RLAVVARREGRSAVFID--GE--RVE-----APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp -CEEEEEEETTEEEEEET--TE--EEC-----CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred -cEEEEEEcCCcEEEEEE--CC--eec-----cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 68999999999999999 42 222 122578899999 9999998887754 7777653
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=9.2e-22 Score=187.39 Aligned_cols=310 Identities=8% Similarity=-0.063 Sum_probs=194.0
Q ss_pred cceeeeeccCcc---ceeEEEEEeeCCCcceEEEEecCC---------c-EEEEEcCCCceeEEeeecccCCcccceEEE
Q 016185 23 YRVTNKLQEGKR---PLYAVVFNFIDSRYFNVFATVGGN---------R-VTVYQCLEGGVIAALQSYVDEDKEESFYTV 89 (394)
Q Consensus 23 ~~~~~~~~~h~~---~v~~i~~sp~~~~~~~~las~~~d---------~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~ 89 (394)
-+....+.+|.. .|.+++||| +|++||+++.+ + +.+||+.+++. ..+... ..+...+..+
T Consensus 47 g~~~~~~~~~~~~~~~v~~~~~Sp----Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~--~~~~~~~~~~ 119 (723)
T 1xfd_A 47 NTSTVLIEGKKIESLRAIRYEISP----DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPP--EVSNAKLQYA 119 (723)
T ss_dssp CCCEEEECTTTTTTTTCSEEEECT----TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCT--TCCSCCCSBC
T ss_pred CcEEEEeccccccccccceEEECC----CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCC--cccccccccc
Confidence 344455666654 499999999 79999988763 4 88999988875 333321 1344457778
Q ss_pred EEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCce------------------eEEEEcCCCCcEEEEcee--
Q 016185 90 SWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI------------------NEIRTQPLKPSLVVSASK-- 149 (394)
Q Consensus 90 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~l~s~~~-- 149 (394)
+|+ |||+ .|+.++. +.|++||+.+++..+....+...+ .+++|+| +++.|++++.
T Consensus 120 ~~S--PdG~-~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~ 194 (723)
T 1xfd_A 120 GWG--PKGQ-QLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAIND 194 (723)
T ss_dssp CBC--SSTT-CEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEEC
T ss_pred EEC--CCCC-EEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECC
Confidence 887 9999 7888775 799999999887766655544333 7899999 7777777664
Q ss_pred -eeEEeeccc---------eeeeeeeccceeeeccCCcEEEEEecCCcEEEEeecc---CCCcccEEEEEecCCCCeeEE
Q 016185 150 -VIIISSLSL---------ICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA---GGHRNEVLSVDFHPSDIYRIA 216 (394)
Q Consensus 150 -~i~~~~~~~---------~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~ 216 (394)
.+.+|.+.. ....+...+. ...+..|++||+.+++....+... ..+...+..++|+| |+++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sp-Dg~~l~ 270 (723)
T 1xfd_A 195 SRVPIMELPTYTGSIYPTVKPYHYPKAGS---ENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAV 270 (723)
T ss_dssp TTSCEEEECCCSSSSSCCCEEEECCBTTS---CCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEE
T ss_pred CccceEEeeccCCcCCCcceeccCCCCCC---CCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeC-CCeEEE
Confidence 233333211 1111111111 022448999999988765555410 01267899999999 998887
Q ss_pred eecc----CCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee-cCCCce----EEEEEe--CcEEEE--eec
Q 016185 217 SCGM----DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYV----DCNRWL--GDFILS--KSV 283 (394)
Q Consensus 217 s~~~----dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i----~~~~~~--~~~l~~--~~~ 283 (394)
+... +..|++||+.+++. ..... .+...+ ..+.|+ |+.|+. +..
T Consensus 271 ~~~~~~~~~~~i~~~d~~~g~~-----------------------~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 327 (723)
T 1xfd_A 271 TWLNRAQNVSILTLCDATTGVC-----------------------TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIP 327 (723)
T ss_dssp EEEETTSCEEEEEEEETTTCCE-----------------------EEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEEC
T ss_pred EEEcCCCCeEEEEEEeCCCCcc-----------------------eEEEEeccCCEEeccCCCceEcCCCCeEEEEEecc
Confidence 6643 46799999988431 22221 223333 266776 665554 456
Q ss_pred CC------eEEEec-CCCCCCCCCCCcceecccccCCCCCeEE-EEEeecCCcceEEEE-eCC--CcEEEEEecCCCcee
Q 016185 284 DN------EIVLWE-PKMKEQSPGEGTADILQKYPVPECDIWF-IKFSCDFHYNAAAIG-NRE--GKIFVWELQSSPPVL 352 (394)
Q Consensus 284 dg------~i~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~-~~d--g~i~iwd~~~~~~~~ 352 (394)
++ .|.+|| ...++.. ....+......+.. ++|+|+++ .|+.. ..+ +.+++|++.......
T Consensus 328 ~~~~~~~~~l~~~d~~~~~~~~-------~~~~l~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~l~~~~~~~~~~ 398 (723)
T 1xfd_A 328 QGGRGKFYHITVSSSQPNSSND-------NIQSITSGDWDVTKILAYDEKGN--KIYFLSTEDLPRRRQLYSANTVGNFN 398 (723)
T ss_dssp CSSSSCEEEEEEECSSCCSSSC-------CCCBSCCSSSCEEEEEEEETTTT--EEEEEESSSCTTCCEEEEECSSTTCC
T ss_pred cCCCcceeEEEEEeccCCCCcc-------ceeEeecCCeEEEeeeEEcCCCC--EEEEEEcCCCCcceEEEEEeCCCCCC
Confidence 66 577777 3333200 02223323334444 68999994 56544 444 889999997643212
Q ss_pred eEEecc-CCccCCeeEEEeccCCCEEEEe
Q 016185 353 IARLSH-AQSKSPIRQTAMSYDGSTILSC 380 (394)
Q Consensus 353 ~~~~~~-~~~~~~v~~~~~s~~~~~l~s~ 380 (394)
...+.. ..|...+..++|+|||++|+..
T Consensus 399 ~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 399 RQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp CBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred cceecccccCCCCeEEEEECCCCCEEEEE
Confidence 233331 0156678899999999988864
No 148
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=4.6e-21 Score=164.98 Aligned_cols=261 Identities=10% Similarity=0.043 Sum_probs=168.9
Q ss_pred cceeeeeccCccceeEEEEEeeCCCcceEEEEecC-Cc-EEEEEcCCCce-eEEeeecccCCcccceEEEEEEEcCCCCc
Q 016185 23 YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGG-NR-VTVYQCLEGGV-IAALQSYVDEDKEESFYTVSWACNVDGIP 99 (394)
Q Consensus 23 ~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~-d~-i~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 99 (394)
.+....+..+...+ +++|+| +++++++++. ++ |.+||+.+++. ...+. .+..+..+++|+ |+|+
T Consensus 30 ~~~~~~~~~~~~~~-~~~~s~----dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-----~~~~~~~~~~~s--~dg~- 96 (331)
T 3u4y_A 30 LEILNQITLGYDFV-DTAITS----DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-----EGQSSMADVDIT--PDDQ- 96 (331)
T ss_dssp CCEEEEEECCCCEE-EEEECS----SSCEEEEEESTTCEEEEEECSSSSCEEEEEE-----ECSSCCCCEEEC--TTSS-
T ss_pred cceeeeEEccCCcc-eEEEcC----CCCEEEEEeCCCCeEEEEECCCCceeEEecc-----cCCCCccceEEC--CCCC-
Confidence 34445555556667 999999 6775555444 55 99999998886 55555 233444446776 9999
Q ss_pred EEEEeecCC---eEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCC
Q 016185 100 FLVAGGING---IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDE 176 (394)
Q Consensus 100 ~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~ 176 (394)
+++++..++ .|.+||+.+++.+..+..+ ....+++|+|++..++++... ++
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~-------------------------~~ 150 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRS-------------------------SA 150 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEET-------------------------TT
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecC-------------------------CC
Confidence 777665553 8999999999988887754 456899999944445555555 68
Q ss_pred c-EEEEEecCCcEEEEe-eccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 177 S-VRLWNVQTGICILIF-AGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 177 ~-i~vwd~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
. |.+|++.....+... .........+..++|+| +++ +++++..++.|++||+.+++.
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~------------------- 210 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPEN------------------- 210 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTS-------------------
T ss_pred ceEEEEEECCCCcEeecCCccccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcc-------------------
Confidence 8 999998754332111 00002445689999999 777 455666789999999987431
Q ss_pred cccceeeeecCCCceEEEEEe--CcEEEE-eecCCeEEEecCCCCCCCCCCCcceecccc---cCCCCCeEEEEEeecCC
Q 016185 254 VQFPVFIASVHSNYVDCNRWL--GDFILS-KSVDNEIVLWEPKMKEQSPGEGTADILQKY---PVPECDIWFIKFSCDFH 327 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~--~~~l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~ 327 (394)
...+..+.. ...+..++|+ |++++. ...++.|.+||+.+++..... .....+ .........++|+|+++
T Consensus 211 -~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~spdg~ 285 (331)
T 3u4y_A 211 -ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVK---SFGHGLLIDPRPLFGANQMALNKTET 285 (331)
T ss_dssp -CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEE---EEECCCCCCCGGGTTCCCEEECTTSS
T ss_pred -cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeec---ccccccccCCCCcccccceEECCCCC
Confidence 001333332 3556778887 675554 446888999999876521000 000111 11111225689999995
Q ss_pred cceEEEEeCCCcEEEEEecCC
Q 016185 328 YNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 328 ~~~l~~~~~dg~i~iwd~~~~ 348 (394)
.+++++..++.|.+||+...
T Consensus 286 -~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 286 -KLFISANISRELKVFTISGK 305 (331)
T ss_dssp -EEEEEETTTTEEEEEETTSC
T ss_pred -EEEEecCCCCcEEEEEecCC
Confidence 23445556779999999875
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.1e-21 Score=174.38 Aligned_cols=244 Identities=11% Similarity=0.111 Sum_probs=163.1
Q ss_pred ceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC----------eeEE-----EEEecCCceeEEEEcCCCCcEEE----
Q 016185 85 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----------KLHK-----SFVGHGDSINEIRTQPLKPSLVV---- 145 (394)
Q Consensus 85 ~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----------~~~~-----~~~~~~~~v~~~~~~~~~~~~l~---- 145 (394)
.+..++++ +++. ++++++.++ +++|+.... .... ....+...|.+++|+| ++++|+
T Consensus 38 ~~n~lavs--~~~~-~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~~~ 112 (434)
T 2oit_A 38 RSSLLAVS--NKYG-LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSACMM 112 (434)
T ss_dssp CCBCEEEE--TTTT-EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEEEE
T ss_pred CccEEEEe--cCCC-EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEEEe
Confidence 45678888 8888 899998887 888875311 0111 1123567899999999 677777
Q ss_pred EceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC--------cEEEEeeccCCCcccEEEEEecCCCCeeEEe
Q 016185 146 SASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG--------ICILIFAGAGGHRNEVLSVDFHPSDIYRIAS 217 (394)
Q Consensus 146 s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s 217 (394)
+++. |+.|++||++++ +.+..+....+|...|.+++|+|.++.+|++
T Consensus 113 sgs~-------------------------d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 113 SSEY-------------------------GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp ETTT-------------------------EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred ccCC-------------------------CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 7888 999999999765 3323333334799999999999943889999
Q ss_pred eccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCC
Q 016185 218 CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMK 295 (394)
Q Consensus 218 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~ 295 (394)
++.||+|++||+++. ..+.....|...|.+++|+ |++|++++.||.|++||.+ +
T Consensus 168 ~s~Dg~v~iwD~~~~-----------------------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~ 223 (434)
T 2oit_A 168 CLADGSIAVLQVTET-----------------------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-L 223 (434)
T ss_dssp EETTSCEEEEEESSS-----------------------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-C
T ss_pred EECCCeEEEEEcCCC-----------------------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-C
Confidence 999999999999983 2344456688999999998 8899999999999999998 3
Q ss_pred CCCCCCCcceecccc----cCCCCCeEEEEEeecCCcceEEE-EeCCC------cEEEEEecCCCc---eeeEEecc---
Q 016185 296 EQSPGEGTADILQKY----PVPECDIWFIKFSCDFHYNAAAI-GNREG------KIFVWELQSSPP---VLIARLSH--- 358 (394)
Q Consensus 296 ~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~l~~-~~~dg------~i~iwd~~~~~~---~~~~~~~~--- 358 (394)
+. ...+... ..|...+.++.|+++. .++++ .+.|| .+++|++...+. .....+..
T Consensus 224 ~~------~~~~~~~~~~~~~~~~~v~~v~w~~~~--~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~ 295 (434)
T 2oit_A 224 QE------KKVIPCPPFYESDHPVRVLDVLWIGTY--VFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCY 295 (434)
T ss_dssp CE------EEEECCCTTCCTTSCEEEEEEEEEETT--EEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSC
T ss_pred cc------cccccCCcccCCCCceeEEEEEEecCc--eEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCC
Confidence 21 0011111 1223478999999987 34433 44443 389999986531 12222221
Q ss_pred --CCccCCeeEEEeccCCCEEEEec-cCCeEEEEE
Q 016185 359 --AQSKSPIRQTAMSYDGSTILSCC-EDGAIWRWD 390 (394)
Q Consensus 359 --~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd 390 (394)
.+...+-..+.+-++.+++++++ ..+.|.|..
T Consensus 296 ~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 296 GSCTERQHHYYLSYIEEWDLVLAASAASTEVSILA 330 (434)
T ss_dssp CCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEE
T ss_pred CCCCCcCcceeeehhccCCEEEEecCCCCceeEEE
Confidence 12222333344446766666554 334455544
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=7.1e-22 Score=187.62 Aligned_cols=282 Identities=11% Similarity=0.082 Sum_probs=185.5
Q ss_pred ceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCcee-EEeeecccC------------CcccceEEEEEEEcCCCCcEE
Q 016185 35 PLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVI-AALQSYVDE------------DKEESFYTVSWACNVDGIPFL 101 (394)
Q Consensus 35 ~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~-~~~~~~~~~------------~~~~~v~~~~~~~~~~~~~~l 101 (394)
.+..+.|. ++.+++++.++| +||+.+++.+ ..+..+... .+...+..++|+ |+ + .+
T Consensus 27 ~~~~~~w~------g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~s--pd-~-~~ 95 (706)
T 2z3z_A 27 YVVGLQWM------GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDA--GR-G-LV 95 (706)
T ss_dssp -CTTCEEE------TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEET--TT-T-EE
T ss_pred cCCCCcCc------CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEEC--CC-C-eE
Confidence 35667777 224555555669 9999998773 333321100 011457778777 88 5 44
Q ss_pred EEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEE
Q 016185 102 VAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLW 181 (394)
Q Consensus 102 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vw 181 (394)
+.+ .++.|++||+.+++... +..+...+.+++|+| +++.|+.+ . ++.|++|
T Consensus 96 ~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-dG~~la~~-~-------------------------~~~i~v~ 146 (706)
T 2z3z_A 96 VLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSP-VGDRVAYV-R-------------------------NHNLYIA 146 (706)
T ss_dssp EEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECT-TSSEEEEE-E-------------------------TTEEEEE
T ss_pred EEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCC-CCCEEEEE-E-------------------------CCeEEEE
Confidence 444 35999999998876544 445677899999999 77788875 5 8999999
Q ss_pred EecC-----CcEEEEeeccCCCccc--------------EEEEEecCCCCeeEEeec-----------------------
Q 016185 182 NVQT-----GICILIFAGAGGHRNE--------------VLSVDFHPSDIYRIASCG----------------------- 219 (394)
Q Consensus 182 d~~~-----~~~~~~~~~~~~~~~~--------------i~~~~~~~~~~~~l~s~~----------------------- 219 (394)
|+.+ ++...... .+... +.++.|+| |+++|++++
T Consensus 147 ~~~~~~~~~g~~~~~~~---~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 147 RGGKLGEGMSRAIAVTI---DGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp ECBCTTSCCCCCEESCS---CCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred ecCcccccCCCcEEecc---CCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 9998 77665443 23332 48899999 999999887
Q ss_pred ----------cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCC--
Q 016185 220 ----------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN-- 285 (394)
Q Consensus 220 ----------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg-- 285 (394)
.+..|++||+.+++.. .+.....|...+.+++|+ |+.+++++.++
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~---------------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 281 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTV---------------------YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ 281 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEE---------------------ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceE---------------------eeccCCCCceeEeeEEEECCCCEEEEEEeCCCC
Confidence 4477999999874310 111122466778999997 77888877775
Q ss_pred ---eEEEecCCCCCCCCCCCcceecccc--cCCCCCeEEEEEee--cCCcceEEEEeCCCcEEEEEecCCCceeeEEecc
Q 016185 286 ---EIVLWEPKMKEQSPGEGTADILQKY--PVPECDIWFIKFSC--DFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH 358 (394)
Q Consensus 286 ---~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 358 (394)
.|.+||+.+++. ...+... ......+..++|+| ++ .++++++.|+.+++|++.... .....+.
T Consensus 282 ~~~~v~~~d~~~g~~------~~~~~~~~~~~~~~~~~~~~~sp~~dg--~~l~~~~~~g~~~l~~~~~~~-~~~~~l~- 351 (706)
T 2z3z_A 282 NECKVNAYDAETGRF------VRTLFVETDKHYVEPLHPLTFLPGSNN--QFIWQSRRDGWNHLYLYDTTG-RLIRQVT- 351 (706)
T ss_dssp CEEEEEEEETTTCCE------EEEEEEEECSSCCCCCSCCEECTTCSS--EEEEEECTTSSCEEEEEETTS-CEEEECC-
T ss_pred CeeEEEEEECCCCce------eeEEEEccCCCeECccCCceeecCCCC--EEEEEEccCCccEEEEEECCC-CEEEecC-
Confidence 899999988731 0011110 11111235679999 88 688999999999999987322 3455565
Q ss_pred CCccCCeeE-EEeccCCCEEEEec-cCC----eEEEEEcC
Q 016185 359 AQSKSPIRQ-TAMSYDGSTILSCC-EDG----AIWRWDAI 392 (394)
Q Consensus 359 ~~~~~~v~~-~~~s~~~~~l~s~~-~dg----~i~iwd~~ 392 (394)
.+...+.. ++|+|+++.|+.++ .++ .|+.||+.
T Consensus 352 -~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 352 -KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp -CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred -CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 56677876 79999999876554 444 56667664
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=8.9e-21 Score=164.65 Aligned_cols=241 Identities=10% Similarity=0.057 Sum_probs=174.9
Q ss_pred cceEEEEEEEcCCCCcEEEEeec-------CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeec
Q 016185 84 ESFYTVSWACNVDGIPFLVAGGI-------NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSL 156 (394)
Q Consensus 84 ~~v~~~~~~~~~~~~~~l~s~~~-------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~ 156 (394)
..+..++++ |+|+ ++++++. ++.|.+||..+++.+..+... ..+..++|+|++..++++...
T Consensus 41 ~~~~~~~~s--~dg~-~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~------- 109 (353)
T 3vgz_A 41 KGAYEMAYS--QQEN-ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTV------- 109 (353)
T ss_dssp SSEEEEEEE--TTTT-EEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETT-------
T ss_pred cCccceEEC--CCCC-EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecC-------
Confidence 455667777 9998 6666653 678999999999988888754 457889999954446667676
Q ss_pred cceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCc------ccEEEEEecCCCCeeEEeec--cCCcEEEEE
Q 016185 157 SLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHR------NEVLSVDFHPSDIYRIASCG--MDNTVKIWS 228 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~l~s~~--~dg~v~iwd 228 (394)
++.|.+||..+++.+..+....... ..+.+++|+| +++.+++++ .++.|.+||
T Consensus 110 ------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d 170 (353)
T 3vgz_A 110 ------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVD 170 (353)
T ss_dssp ------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEE
T ss_pred ------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEc
Confidence 8999999999999888877311000 1278999999 777666655 478999999
Q ss_pred ccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCccee
Q 016185 229 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADI 306 (394)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 306 (394)
..+++ .+..+..+...+.++.|+ ++++++++.++.|.+||+.+++ .
T Consensus 171 ~~~~~-----------------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~---------~ 218 (353)
T 3vgz_A 171 GGNIK-----------------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK---------I 218 (353)
T ss_dssp TTTTE-----------------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE---------E
T ss_pred CCCCc-----------------------eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe---------E
Confidence 98843 344444445557777886 7889988999999999998775 2
Q ss_pred ccccc----CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEec-
Q 016185 307 LQKYP----VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC- 381 (394)
Q Consensus 307 ~~~~~----~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~- 381 (394)
...+. .+...+..++|+|+++ .++++...++.|.+||..+++ .+..+... ....++|+|++++|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~--~~~~~~~~----~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQ-RAFITDSKAAEVLVVDTRNGN--ILAKVAAP----ESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTT-EEEEEESSSSEEEEEETTTCC--EEEEEECS----SCCCEEEETTTTEEEEEET
T ss_pred EEEEEcCCCCCCcccceEEECCCCC-EEEEEeCCCCEEEEEECCCCc--EEEEEEcC----CCceEEECCCCCEEEEEEC
Confidence 33322 2455678899999995 234444456999999998875 34444421 125699999999665554
Q ss_pred cCCeEEEEEcCC
Q 016185 382 EDGAIWRWDAIP 393 (394)
Q Consensus 382 ~dg~i~iwd~~~ 393 (394)
.++.|.+||+.+
T Consensus 292 ~~~~v~~~d~~~ 303 (353)
T 3vgz_A 292 QAGKVSVIDAKS 303 (353)
T ss_dssp TTTEEEEEETTT
T ss_pred CCCeEEEEECCC
Confidence 789999999864
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.1e-21 Score=165.75 Aligned_cols=237 Identities=10% Similarity=-0.075 Sum_probs=169.0
Q ss_pred eeccCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCC-CceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee-
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLE-GGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG- 105 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~- 105 (394)
.+..|...|.+++|+| ++++|++++.+.|.+||+.+ ++....... .+...+.+++|+ |+|+ +|++++
T Consensus 36 ~~~~~~~~v~~~~~sp----dg~~l~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~s--pdg~-~l~~~~~ 104 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSP----DGKYLLLNSEGLLYRLSLAGDPSPEKVDTG----FATICNNDHGIS--PDGA-LYAISDK 104 (297)
T ss_dssp EEEEESSCCEEEEECT----TSSEEEEEETTEEEEEESSSCCSCEECCCT----TCCCBCSCCEEC--TTSS-EEEEEEC
T ss_pred eeccCCcceEeeEECC----CCCEEEEEcCCeEEEEeCCCCCCceEeccc----cccccccceEEC--CCCC-EEEEEEe
Confidence 4566889999999999 78999998866699999988 766544431 234667778887 9999 888887
Q ss_pred -cCCeEEEE--ECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEE
Q 016185 106 -INGIIRVI--DVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWN 182 (394)
Q Consensus 106 -~dg~i~vw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd 182 (394)
.++...|| +..+++ ...+..+ ..+..++|+|++..++++++. ++.+++|+
T Consensus 105 ~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~-------------------------~~~~~l~~ 157 (297)
T 2ojh_A 105 VEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIR-------------------------DQVFDIYS 157 (297)
T ss_dssp TTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEE-------------------------TTEEEEEE
T ss_pred CCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECC-------------------------CCceEEEE
Confidence 33445554 544444 3444433 358899999944444447888 99999999
Q ss_pred ecC-CcEEEEeeccCCCcccEEEEEecCCCCeeEEeec-cCCcEEEEEccccceeeccccccCCCCCCCCccccccceee
Q 016185 183 VQT-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFI 260 (394)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (394)
++. +.....+. .+...+.+++|+| ++..|+.++ .++.+++|++... ......
T Consensus 158 ~~~~~~~~~~~~---~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~----------------------~~~~~~ 211 (297)
T 2ojh_A 158 MDIDSGVETRLT---HGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVD----------------------GSSVER 211 (297)
T ss_dssp EETTTCCEEECC---CSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETT----------------------SSCEEE
T ss_pred EECCCCcceEcc---cCCCccccceECC-CCCEEEEEecCCCCccEEEECCC----------------------CCCcEE
Confidence 753 23334444 5788999999999 887666555 5899999998731 123455
Q ss_pred eecCCCceEEEEEe--CcEEEEeecC-----------CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCC
Q 016185 261 ASVHSNYVDCNRWL--GDFILSKSVD-----------NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFH 327 (394)
Q Consensus 261 ~~~~~~~i~~~~~~--~~~l~~~~~d-----------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (394)
+..|...+.++.|+ +++|++++.+ +.|.+||+.+++. ..+..+..+...+..++|+|++
T Consensus 212 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~spdg- 283 (297)
T 2ojh_A 212 ITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV-------ETLFDLFGGQGTMNSPNWSPDG- 283 (297)
T ss_dssp CCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC-------EEEEEEEESTTTSCSCCBCTTS-
T ss_pred EecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc-------eeeeccCCCCcccccceECCCC-
Confidence 66677788889997 7788877765 5799999987642 1233444566778889999999
Q ss_pred cceEEEEeCC
Q 016185 328 YNAAAIGNRE 337 (394)
Q Consensus 328 ~~~l~~~~~d 337 (394)
..|++++.+
T Consensus 284 -~~l~~~~~~ 292 (297)
T 2ojh_A 284 -DEFAYVRYF 292 (297)
T ss_dssp -SEEEEEEEC
T ss_pred -CEEEEEEec
Confidence 466666654
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=8.7e-20 Score=158.10 Aligned_cols=253 Identities=11% Similarity=0.050 Sum_probs=163.6
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecC--Cc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee-c
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGG--NR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG-I 106 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~--d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~-~ 106 (394)
.+...+..++|+| +|++++++.. ++ |.+|++.+++. ..+.... .+...+..++|+ |+|+ +|++++ .
T Consensus 37 ~~~~~p~~~a~sp----dg~l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~--~~~~~p~~~a~s--pdg~-~l~~~~~~ 106 (347)
T 3hfq_A 37 AATQNPTYLALSA----KDCLYSVDKEDDEGGIAAWQIDGQTA-HKLNTVV--APGTPPAYVAVD--EARQ-LVYSANYH 106 (347)
T ss_dssp EECSCCCCEEECT----TCEEEEEEEETTEEEEEEEEEETTEE-EEEEEEE--EESCCCSEEEEE--TTTT-EEEEEETT
T ss_pred eccCCcceEEEcc----CCeEEEEEecCCCceEEEEEecCCcE-EEeeeee--cCCCCCEEEEEC--CCCC-EEEEEeCC
Confidence 4557788899999 7885555432 34 99999976653 2222111 244566678887 9999 777776 7
Q ss_pred CCeEEEEECCC-C--eeEEEEEec---------CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeecc
Q 016185 107 NGIIRVIDVSN-E--KLHKSFVGH---------GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 107 dg~i~vwd~~~-~--~~~~~~~~~---------~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
++.|.+|++.. + +.+..+... ...+.+++|+| +++++++...
T Consensus 107 ~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~------------------------- 160 (347)
T 3hfq_A 107 KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLG------------------------- 160 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETT-------------------------
T ss_pred CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCC-------------------------
Confidence 89999999963 3 233333321 12478899999 5557777777
Q ss_pred CCcEEEEEec-CCcEEEEeeccCCCcccEEEEEecCCCCee-EEeeccCCcEEEEEccccceeeccccccCCCCCCCCcc
Q 016185 175 DESVRLWNVQ-TGICILIFAGAGGHRNEVLSVDFHPSDIYR-IASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 252 (394)
Q Consensus 175 d~~i~vwd~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 252 (394)
++.|.+|++. +++..............+..++|+| ++++ +++...++.+.+|++.......
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~---------------- 223 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAF---------------- 223 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEE----------------
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCce----------------
Confidence 8899999998 5543322110012334678899999 8874 4556778999999987511000
Q ss_pred ccccceeeeecCC------CceEEEEEe--CcEE-EEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEe
Q 016185 253 YVQFPVFIASVHS------NYVDCNRWL--GDFI-LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 323 (394)
Q Consensus 253 ~~~~~~~~~~~~~------~~i~~~~~~--~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 323 (394)
..+..+.... ..+..++|+ |+++ ++...++.|.+|++.... ....+..+..+...+..++|+
T Consensus 224 ---~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g------~~~~~~~~~~~~~~~~~~~~s 294 (347)
T 3hfq_A 224 ---TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG------HLTLIQQISTEGDFPRDFDLD 294 (347)
T ss_dssp ---EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG------CEEEEEEEECSSSCCCEEEEC
T ss_pred ---EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC------cEEEeEEEecCCCCcCeEEEC
Confidence 0111111111 357788887 6666 555668999999987431 122444555555567899999
Q ss_pred ecCCcceEEEEeC-CCcEEEEEecC
Q 016185 324 CDFHYNAAAIGNR-EGKIFVWELQS 347 (394)
Q Consensus 324 ~~~~~~~l~~~~~-dg~i~iwd~~~ 347 (394)
|++ ++|++++. ++.|.+|++..
T Consensus 295 pdg--~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 295 PTE--AFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp TTS--SEEEEEETTTTEEEEEEECT
T ss_pred CCC--CEEEEEEcCCCcEEEEEEeC
Confidence 999 56666664 58999996653
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=1.8e-19 Score=157.06 Aligned_cols=274 Identities=11% Similarity=0.057 Sum_probs=170.3
Q ss_pred cEEEEEcC--CCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC----CeEEEEECCC--Cee--EEEEEecC
Q 016185 59 RVTVYQCL--EGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN----GIIRVIDVSN--EKL--HKSFVGHG 128 (394)
Q Consensus 59 ~i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d----g~i~vwd~~~--~~~--~~~~~~~~ 128 (394)
+|.+|++. +++. ..+... +......++|+ |+|+ +|++++.+ +.|.+|++.. ++. +.....+.
T Consensus 28 ~i~~~~~d~~~g~~-~~~~~~----~~~~p~~l~~s--pdg~-~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 28 GIYTFRFNEETGES-LPLSDA----EVANPSYLIPS--ADGK-FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp EEEEEEEETTTCCE-EEEEEE----ECSCCCSEEEC--TTSS-EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CEEEEEEeCCCCCE-EEeecc----cCCCCceEEEC--CCCC-EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 38888764 4443 222221 23344557776 9999 88888775 8999998865 433 33344455
Q ss_pred CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE----eec-------cCC
Q 016185 129 DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI----FAG-------AGG 197 (394)
Q Consensus 129 ~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~----~~~-------~~~ 197 (394)
.....+++ ++..++++... ++.|.+|++.....+.. +.. ...
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~-------------------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~ 152 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYS-------------------------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQ 152 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETT-------------------------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTC
T ss_pred CCcEEEEE--CCCEEEEEECC-------------------------CCEEEEEEeCCCCcCcccceeEEccCCCCCcccc
Confidence 56677777 24444444445 88999999975432211 110 001
Q ss_pred CcccEEEEEecCCCCeeE-EeeccCCcEEEEEccccce----e-eccccccCCCCCCCCccccccceeeeecCCCceEEE
Q 016185 198 HRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMKEFWT----Y-VEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN 271 (394)
Q Consensus 198 ~~~~i~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 271 (394)
+...+.+++|+| +++++ ++...++.|.+|++..... . +.. ..........+......+
T Consensus 153 ~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~~~~~~~~ 216 (361)
T 3scy_A 153 TMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLT---------------KGTPEAFKVAPGSGPRHL 216 (361)
T ss_dssp SSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE---------------EEEEEEEECCTTCCEEEE
T ss_pred CCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceee---------------cccccceecCCCCCCeEE
Confidence 233468899999 88755 4555689999999876221 0 000 000011122334556788
Q ss_pred EEe--CcEEEEee-cCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeC--CCcEEEEEec
Q 016185 272 RWL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR--EGKIFVWELQ 346 (394)
Q Consensus 272 ~~~--~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~--dg~i~iwd~~ 346 (394)
+|+ |+++++++ .++.|.+||+.+++.. ....+.....+......++|+|++ ++|+++.. ++.|.+|++.
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~~g~~~----~~~~~~~~~~~~~~~~~i~~spdg--~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYADGMLD----EIQTVAADTVNAQGSGDIHLSPDG--KYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEETTEEE----EEEEEESCSSCCCCEEEEEECTTS--SEEEEEECSSSCEEEEEEEC
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEecCCceE----EeEEEecCCCCCCCcccEEECCCC--CEEEEECCCCCCEEEEEEEc
Confidence 887 66776666 6899999999855310 011122233334456899999999 46655554 5899999996
Q ss_pred --CCCceeeEEeccCCccCCeeEEEeccCCCEEEEec-cCCeEEEEEcC
Q 016185 347 --SSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-EDGAIWRWDAI 392 (394)
Q Consensus 347 --~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~ 392 (394)
+++...+..+. . ...+..++|+|||++|++++ .++.|.+|++.
T Consensus 291 ~~~g~~~~~~~~~--~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 291 ETNGTLTKVGYQL--T-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp TTTCCEEEEEEEE--C-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCcEEEeeEec--C-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 34433444444 2 35788999999999888887 67899998764
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=6.1e-20 Score=161.61 Aligned_cols=306 Identities=11% Similarity=0.036 Sum_probs=188.1
Q ss_pred eeeeeccCccceeE-----EEEEeeCCCcceEEEEecC-Cc---EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcC
Q 016185 25 VTNKLQEGKRPLYA-----VVFNFIDSRYFNVFATVGG-NR---VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNV 95 (394)
Q Consensus 25 ~~~~~~~h~~~v~~-----i~~sp~~~~~~~~las~~~-d~---i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 95 (394)
....+..|...... .+||| +|+.|+.++. ++ |.+||+.+++...... .+...+....|+ |
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~Sp----Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-----~~~~~~~~~~~s--p 90 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTR----DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-----GRGDNTFGGFLS--P 90 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCT----TSCEEEEEECTTSSCEEEEEETTTCEEEECCC-----SSCBCSSSCEEC--T
T ss_pred ceEEecCCcccccchhhcCccCCC----CCCEEEEEEcCCCCceEEEEeCCCCceEEeee-----CCCCCccceEEc--C
Confidence 34456666655555 88999 7888888776 55 8888988887654443 334444445666 9
Q ss_pred CCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEE--cCCCCcEEEEceeeeEEeeccceeeeeeec---ccee
Q 016185 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRT--QPLKPSLVVSASKVIIISSLSLICLLLFIR---SNCL 170 (394)
Q Consensus 96 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~---~~~~ 170 (394)
+|+ .|+.++.++.|++||+.+++....+..+...+....| +| ++.+++.... ..... ...... ...+
T Consensus 91 dg~-~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~----~~~~~--~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 91 DDD-ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEI----RREDW--VPLTDWKKFHEFY 162 (388)
T ss_dssp TSS-EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEE----EGGGC--CCCCSHHHHHHHG
T ss_pred CCC-EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECC-CCCeeccccc----cCccc--ccccccchhhhhh
Confidence 999 8999998999999999999877777766665554444 77 6666654221 00000 000000 0012
Q ss_pred eeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC------CcEEEEEccccceeeccccccCC
Q 016185 171 RVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 171 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
....+..|.+||+.+++...... +...+..+.|+|.++..|+....+ ..|.++|.....
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~l~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~----------- 227 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGESTVILQ----ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN----------- 227 (388)
T ss_dssp GGCCCEEEEEEETTTCCEEEEEE----ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-----------
T ss_pred ccCCcceEEEEECCCCceEEeec----CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-----------
Confidence 23346789999999887665544 667789999999456666655543 367777776521
Q ss_pred CCCCCCccccccceeeeecCC--CceEEEEEe--CcEEEEeec-C----CeEEEecCCCCCCCCCCCcceecccccCCCC
Q 016185 245 LPSKFPTKYVQFPVFIASVHS--NYVDCNRWL--GDFILSKSV-D----NEIVLWEPKMKEQSPGEGTADILQKYPVPEC 315 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~--~~~l~~~~~-d----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
...+..+. ..+....|+ |+.|+..+. + ..|.+||+.+++. ..+..+..+..
T Consensus 228 -------------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------~~l~~~~~~~~ 287 (388)
T 3pe7_A 228 -------------MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------RQLTSMPACSH 287 (388)
T ss_dssp -------------CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------EEEEEECCEEE
T ss_pred -------------eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------EEEEcCCCcee
Confidence 12222233 346677887 666654433 2 2499999998752 12222222000
Q ss_pred ---CeEEEEEeecCCcceEEEE---------eCCCcEEEEEecCCCceeeEEeccCCccC-----------CeeEEEecc
Q 016185 316 ---DIWFIKFSCDFHYNAAAIG---------NREGKIFVWELQSSPPVLIARLSHAQSKS-----------PIRQTAMSY 372 (394)
Q Consensus 316 ---~i~~~~~~~~~~~~~l~~~---------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----------~v~~~~~s~ 372 (394)
....++|+|+++ .|+.. ..+..|++||+.+++. ..+. .+.. .+..++|+|
T Consensus 288 ~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~--~~~~~~~~~~~~~~~~~~~~~~sp 360 (388)
T 3pe7_A 288 LMSNYDGSLMVGDGS--DAPVDVQDDSGYKIENDPFLYVFNMKNGTQ---HRVA--RHDTSWKVFEGDRQVTHPHPSFTP 360 (388)
T ss_dssp EEECTTSSEEEEEEC--CC------------CCCCEEEEEETTTTEE---EEEE--ECCCCCCCBTTBSSTTCCCCEECT
T ss_pred eeecCCCCeEccCCC--cceeEeeeccccccCCCCEEEEEeccCCce---EEec--cccCcccccccccccCCCCccCCC
Confidence 011136999995 44432 4567899999988742 3333 2223 477889999
Q ss_pred CCCEEEEec-cCCeEEEEEc
Q 016185 373 DGSTILSCC-EDGAIWRWDA 391 (394)
Q Consensus 373 ~~~~l~s~~-~dg~i~iwd~ 391 (394)
||+.|+.++ .+|...||.+
T Consensus 361 Dg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 361 DDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp TSSEEEEEECTTSSCEEEEE
T ss_pred CCCEEEEEecCCCceeEEEE
Confidence 999888665 4676666654
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=4.8e-21 Score=182.25 Aligned_cols=284 Identities=11% Similarity=0.038 Sum_probs=185.0
Q ss_pred eEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec---------C
Q 016185 37 YAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI---------N 107 (394)
Q Consensus 37 ~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~---------d 107 (394)
..++|+| +|++++++.++.|++||+.+++....+..+.. ....+..++|+ |||+ +|++++. +
T Consensus 19 ~~~~~s~----dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~S--pDg~-~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 19 FFPNWIS----GQEYLHQSADNNIVLYNIETGQSYTILSNRTM--KSVNASNYGLS--PDRQ-FVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCEESS----SSEEEEECTTSCEEEEESSSCCEEEEECHHHH--HTTTCSEEEEC--TTSS-EEEEEEEEEECSSSCEE
T ss_pred CccEECC----CCeEEEEcCCCCEEEEEcCCCcEEEEEccccc--cccceeeEEEC--CCCC-eEEEEecCceeEEeecc
Confidence 3789999 78777776544499999999887665552110 01137778877 9999 8887765 7
Q ss_pred CeEEEEECCCCeeE--EEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC
Q 016185 108 GIIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT 185 (394)
Q Consensus 108 g~i~vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~ 185 (394)
+.|++||+.+++.+ ..+ ...+..++|+| +++.|+.+. ++.|++||+.+
T Consensus 90 ~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SP-DG~~la~~~--------------------------~~~i~~~~~~~ 139 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNEL---PRPIQYLCWSP-VGSKLAYVY--------------------------QNNIYLKQRPG 139 (719)
T ss_dssp EEEEEEETTTTEECCSSCC---CSSBCCEEECS-STTCEEEEE--------------------------TTEEEEESSTT
T ss_pred eEEEEEECCCCccccceec---CcccccceECC-CCCEEEEEE--------------------------CCeEEEEeCCC
Confidence 89999999988762 222 25688999999 778888775 78999999988
Q ss_pred CcEEEEeeccCCCcccE-----------------EEEEecCCCCeeEEeeccCC--------------------------
Q 016185 186 GICILIFAGAGGHRNEV-----------------LSVDFHPSDIYRIASCGMDN-------------------------- 222 (394)
Q Consensus 186 ~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~~l~s~~~dg-------------------------- 222 (394)
++..+.... ++...| .+++|+| |++.|++++.|.
T Consensus 140 g~~~~l~~~--~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 140 DPPFQITFN--GRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp SCCEECCCC--CBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCcEEEecC--CCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 876543321 233222 4899999 999999887652
Q ss_pred --------cEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecC----CeEE
Q 016185 223 --------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD----NEIV 288 (394)
Q Consensus 223 --------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d----g~i~ 288 (394)
.|++||+.+++...... ......+..|...+..++|+ ++++++.... ..|.
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~ 281 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQE---------------VPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLS 281 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEE---------------CCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCccceeE---------------ccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEE
Confidence 67788877633100000 00001234578889999998 5555553322 3588
Q ss_pred Eec----CCCCCCCCCCCcceecccc----cCCCCCeE-----EEEEeecCCcceEEEEeCCC--cEEEEEecCCCceee
Q 016185 289 LWE----PKMKEQSPGEGTADILQKY----PVPECDIW-----FIKFSCDFHYNAAAIGNREG--KIFVWELQSSPPVLI 353 (394)
Q Consensus 289 ~~d----~~~~~~~~~~~~~~~~~~~----~~~~~~i~-----~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~ 353 (394)
+|| +.+++. .... ..+...+. .+.|+|+++..++++...+| .|.+||+.+++ .
T Consensus 282 ~~d~~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~---~ 349 (719)
T 1z68_A 282 ICDFREDWQTWDC---------PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN---A 349 (719)
T ss_dssp EEEECSSSSSEEC---------CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT---C
T ss_pred EEcccCCCCCCce---------EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc---e
Confidence 899 766542 1222 23444444 67899999522233455566 45666665553 3
Q ss_pred EEeccCCccCCeeEEEeccCCCEEEEeccC-----CeEEEEEcC
Q 016185 354 ARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWDAI 392 (394)
Q Consensus 354 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~ 392 (394)
..+. .+...+..+.++ +++.|+..+.+ +..++|.+.
T Consensus 350 ~~lt--~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 350 IQIT--SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EECS--CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred Eecc--cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 4444 444567777777 77777766554 888999874
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=1.7e-19 Score=155.44 Aligned_cols=272 Identities=10% Similarity=0.088 Sum_probs=182.6
Q ss_pred eecCCCceeeeecccccccceeeeecc-Ccc-ceeEEEEEeeCCCcceE-EEEecCCc-EEEEEcCCCceeEEeeecccC
Q 016185 5 AIGCEPLVGSLTPSKKREYRVTNKLQE-GKR-PLYAVVFNFIDSRYFNV-FATVGGNR-VTVYQCLEGGVIAALQSYVDE 80 (394)
Q Consensus 5 a~g~~~~~~~~~~~~~~~~~~~~~~~~-h~~-~v~~i~~sp~~~~~~~~-las~~~d~-i~vw~~~~~~~~~~~~~~~~~ 80 (394)
.++..+....+.+. ...+....+.. +.. .+.+++|+| +++. ++++..++ |.+||+.+++.+..+......
T Consensus 5 v~~~~~~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~~s~----dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 5 LAPARPDKLVVIDT--EKMAVDKVITIADAGPTPMVPMVAP----GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEETTTEEEEEET--TTTEEEEEEECTTCTTCCCCEEECT----TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred EEcCCCCeEEEEEC--CCCcEEEEEEcCCCCCCccceEEcC----CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 34445555555433 33344555542 222 588999999 6754 55666555 999999998877666531111
Q ss_pred CcccceEEEEEEEcCCCCcEEEEee------------cCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEce
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGG------------INGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSAS 148 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 148 (394)
.+...+..++|+ |+|+ +|+++. .++.|.+||+.+++.+..+.. ...+.+++|+| +++.++++
T Consensus 79 ~~~~~~~~~~~s--~dg~-~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~- 152 (337)
T 1pby_B 79 ERVKSLFGAALS--PDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL- 152 (337)
T ss_dssp EEEECTTCEEEC--TTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE-
T ss_pred cccccccceEEC--CCCC-EEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe-
Confidence 122345567776 9998 777775 579999999999888887774 45678899999 55655554
Q ss_pred eeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC-C-----
Q 016185 149 KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-N----- 222 (394)
Q Consensus 149 ~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-g----- 222 (394)
++.|.+||+.+++....+... ....+ +.|+| ++..++..+.. +
T Consensus 153 --------------------------~~~i~~~d~~~~~~~~~~~~~-~~~~~---~~~s~-dg~~l~~~~~~~~~~~~~ 201 (337)
T 1pby_B 153 --------------------------GRDLHVMDPEAGTLVEDKPIQ-SWEAE---TYAQP-DVLAVWNQHESSGVMATP 201 (337)
T ss_dssp --------------------------SSSEEEEETTTTEEEEEECST-TTTTT---TBCCC-BCCCCCCCCTTTTEEEEE
T ss_pred --------------------------CCeEEEEECCCCcEeeeeecc-ccCCC---ceeCC-CccEEeeeccCCCceeee
Confidence 357999999999888777621 11122 37888 77666554433 2
Q ss_pred ------------------cEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEee
Q 016185 223 ------------------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKS 282 (394)
Q Consensus 223 ------------------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~ 282 (394)
.|.+||+.+++. .......+...+.+++|+ +++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~----------------------~~~~~~~~~~~~~~~~~s~dg~~l~~~- 258 (337)
T 1pby_B 202 FYTARKDIDPADPTAYRTGLLTMDLETGEM----------------------AMREVRIMDVFYFSTAVNPAKTRAFGA- 258 (337)
T ss_dssp EEEEBTTSCTTSGGGEEEEEEEEETTTCCE----------------------EEEEEEECSSCEEEEEECTTSSEEEEE-
T ss_pred eeccccccccccccccccceEEEeCCCCCc----------------------eEeecCCCCCceeeEEECCCCCEEEEe-
Confidence 367888877432 122334556677888887 6777777
Q ss_pred cCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec
Q 016185 283 VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS 357 (394)
Q Consensus 283 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 357 (394)
++.|.+||+.+++ .+..+... ..+..++|+|++ .+|++++.++.|++||+.+++ .+..+.
T Consensus 259 -~~~v~~~d~~~~~---------~~~~~~~~-~~~~~~~~s~dg--~~l~~~~~~~~i~v~d~~~~~--~~~~~~ 318 (337)
T 1pby_B 259 -YNVLESFDLEKNA---------SIKRVPLP-HSYYSVNVSTDG--STVWLGGALGDLAAYDAETLE--KKGQVD 318 (337)
T ss_dssp -ESEEEEEETTTTE---------EEEEEECS-SCCCEEEECTTS--CEEEEESBSSEEEEEETTTCC--EEEEEE
T ss_pred -CCeEEEEECCCCc---------CcceecCC-CceeeEEECCCC--CEEEEEcCCCcEEEEECcCCc--EEEEEE
Confidence 7999999998765 33333322 356789999999 577888889999999999885 445554
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=1.7e-19 Score=157.21 Aligned_cols=274 Identities=9% Similarity=-0.046 Sum_probs=171.9
Q ss_pred cEEEEEcC--CCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECC-CCeeEEEEEec-CCceeEE
Q 016185 59 RVTVYQCL--EGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS-NEKLHKSFVGH-GDSINEI 134 (394)
Q Consensus 59 ~i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~-~~~v~~~ 134 (394)
+|.+|++. +++ +..+..... .....+..++|+ |+|+ +|++++.+ .|.+|++. +++........ .+.+.++
T Consensus 15 ~i~~~~~d~~~g~-l~~~~~~~~-~~~~~~~~~a~s--pdg~-~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~ 88 (365)
T 1jof_A 15 AIFTVQFDDEKLT-CKLIKRTEI-PQDEPISWMTFD--HERK-NIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRAN 88 (365)
T ss_dssp EEEEEEEETTTTE-EEEEEEEEC-CTTCCCSEEEEC--TTSS-EEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGG
T ss_pred cEEEEEEECCCCC-EEEeeEEcc-CCCCCCcEEEEC--CCCC-EEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccE
Confidence 47777653 444 333321100 122345567776 9999 88888887 99999997 77665443311 1335678
Q ss_pred EEcCCCCc--EEEEce-------------eeeEEeeccceeeeeeeccceeeeccCCcEEEEEec-CCcEEEEeecc-CC
Q 016185 135 RTQPLKPS--LVVSAS-------------KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQ-TGICILIFAGA-GG 197 (394)
Q Consensus 135 ~~~~~~~~--~l~s~~-------------~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~-~~~~~~~~~~~-~~ 197 (394)
+|+| +++ ++++++ . ++.+.+|++. .++....+... ..
T Consensus 89 ~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~-------------------------~g~v~v~~~~~~g~~~~~~~~~~~~ 142 (365)
T 1jof_A 89 DADT-NTRAIFLLAAKQPPYAVYANPFYKF-------------------------AGYGNVFSVSETGKLEKNVQNYEYQ 142 (365)
T ss_dssp CTTS-CCEEEEEEECSSTTCCEEEEEESSS-------------------------CCEEEEEEECTTCCEEEEEEEEECC
T ss_pred EECC-CCCEEEEEEecCCcceeccceeecC-------------------------CceEEEEccCCCCcCcceEeeEEeC
Confidence 9999 666 355553 4 8999999997 46554433311 02
Q ss_pred CcccEEEEEecCCCCeeEEeec-cCCcEEEEEcc-ccceeeccccccCCCCCCCCccccccceeeee--cCCCceEEEEE
Q 016185 198 HRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMK-EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS--VHSNYVDCNRW 273 (394)
Q Consensus 198 ~~~~i~~~~~~~~~~~~l~s~~-~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~ 273 (394)
+...+.+++|+| ++++++++. .++.|++||+. +++. ..+..+. .|...+..++|
T Consensus 143 ~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~---------------------~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 143 ENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEV---------------------ELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp TTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCE---------------------EEEEEEECSSTTCCEEEEEE
T ss_pred CCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCE---------------------EEeeeEecCCCCCCCCEeEE
Confidence 456789999999 888777654 46899999998 5321 1122222 24566888899
Q ss_pred e--CcEEEEeec-CCeEEEecCCC--CCCCCCCCcceeccccc----CCCC------CeEEEE-EeecCCcceEEEEeCC
Q 016185 274 L--GDFILSKSV-DNEIVLWEPKM--KEQSPGEGTADILQKYP----VPEC------DIWFIK-FSCDFHYNAAAIGNRE 337 (394)
Q Consensus 274 ~--~~~l~~~~~-dg~i~~~d~~~--~~~~~~~~~~~~~~~~~----~~~~------~i~~~~-~~~~~~~~~l~~~~~d 337 (394)
+ |+++++++. ++.|.+|++.. ++... ....+..++ ++.. .+..++ |+|+++ +|++++.+
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~--~l~v~~~~ 275 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVIDPATHMPVY---THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK--YMFASSRA 275 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEE---EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS--EEEEEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEEeCCCCcEEE---ccceEEcCCCCcCCcccccccccccccEEEECCCCC--EEEEECCC
Confidence 8 677777664 78999997653 32100 000112222 1222 478899 999994 56655432
Q ss_pred -C-----cEEEEEec-CCCceeeE-EeccCCccCCeeEEEecc---CCCEEEEeccC-CeEEEEEcCC
Q 016185 338 -G-----KIFVWELQ-SSPPVLIA-RLSHAQSKSPIRQTAMSY---DGSTILSCCED-GAIWRWDAIP 393 (394)
Q Consensus 338 -g-----~i~iwd~~-~~~~~~~~-~~~~~~~~~~v~~~~~s~---~~~~l~s~~~d-g~i~iwd~~~ 393 (394)
+ .|.+|++. +++...+. ... .+...+..++|+| ||++|++++.+ +.|.+|++..
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~--~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSP--TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEE--CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeee--cCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 2 89999996 44322211 132 2334567899999 89999998864 8999999864
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=2.4e-20 Score=173.03 Aligned_cols=233 Identities=10% Similarity=-0.013 Sum_probs=161.8
Q ss_pred ccceEEEEEEEcCCCCcEEEEeec-CCeEEEEECCCCeeEEEEEecC-CceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGI-NGIIRVIDVSNEKLHKSFVGHG-DSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
..+|++++++ |||+ .|+.++. ||+++||++..++.. .+..|. ..+..++|+| + +++++++.
T Consensus 21 ~~~~~~~~~~--~DG~-~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~sp-d-~~l~~~~~----------- 83 (582)
T 3o4h_A 21 AVEKYSLQGV--VDGD-KLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGV-G-RVILVRDV----------- 83 (582)
T ss_dssp HSCEEEEEEE--ETTT-EEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTC-S-EEEEEEEC-----------
T ss_pred ccchheeecC--CCCC-eEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCC-C-eEEEEecc-----------
Confidence 4578888888 9999 8887776 999999998666554 444454 6899999999 5 66665541
Q ss_pred eeeeeccceeeeccCCcEEEEEecC--CcEEEEeeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccccceeec
Q 016185 161 LLLFIRSNCLRVGQDESVRLWNVQT--GICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~ 237 (394)
.+.+....+|.+.. ......+. ....+...+|+| +++ .+++.+.++.+.+||+.+++
T Consensus 84 -----------~~g~~~~~l~~~~~~~~g~~~~l~----~~~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~---- 143 (582)
T 3o4h_A 84 -----------SKGAEQHALFKVNTSRPGEEQRLE----AVKPMRILSGVD-TGEAVVFTGATEDRVALYALDGGG---- 143 (582)
T ss_dssp -----------STTSCCEEEEEEETTSTTCCEECT----TSCSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTE----
T ss_pred -----------CCCCcceEEEEEeccCCCcccccc----CCCCceeeeeCC-CCCeEEEEecCCCCceEEEccCCc----
Confidence 00135566766644 22222333 222334557777 543 33344444556699998743
Q ss_pred cccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecC----CeEEEecCCCCCCCCCCCcceeccccc
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD----NEIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
.. .+..+.. .++.|+ |+++++++.+ +.|++||+.+++ ...+.
T Consensus 144 -------------------~~-~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~----------~~~l~ 191 (582)
T 3o4h_A 144 -------------------LR-ELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG----------LRVFD 191 (582)
T ss_dssp -------------------EE-EEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC----------CEEEC
T ss_pred -------------------EE-EeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC----------ceEee
Confidence 11 2222223 566665 9999988877 789999998775 33556
Q ss_pred CCCCCeEEEEEeecCCcceEEEEeCCC--cEEEEEecCCCceeeEEeccCCccCCeeEEE--------eccCCCEEEEec
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGNREG--KIFVWELQSSPPVLIARLSHAQSKSPIRQTA--------MSYDGSTILSCC 381 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~s~~ 381 (394)
.+...+..++|+||+ +.|+++..++ .|++||+.+++.. .+. +|...+..++ |+|||.++++++
T Consensus 192 ~~~~~~~~~~~SpDG--~~l~~~~~~~~~~i~~~d~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 264 (582)
T 3o4h_A 192 SGEGSFSSASISPGM--KVTAGLETAREARLVTVDPRDGSVE---DLE--LPSKDFSSYRPTAITWLGYLPDGRLAVVAR 264 (582)
T ss_dssp CSSCEEEEEEECTTS--CEEEEEECSSCEEEEEECTTTCCEE---ECC--CSCSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred cCCCccccceECCCC--CEEEEccCCCeeEEEEEcCCCCcEE---Ecc--CCCcChhhhhhccccceeEcCCCcEEEEEE
Confidence 667778999999999 5788888888 8999999887532 444 5666677677 999999999999
Q ss_pred cCCeEEEEEc
Q 016185 382 EDGAIWRWDA 391 (394)
Q Consensus 382 ~dg~i~iwd~ 391 (394)
.||.+++|++
T Consensus 265 ~~g~~~l~~~ 274 (582)
T 3o4h_A 265 REGRSAVFID 274 (582)
T ss_dssp ETTEEEEEET
T ss_pred cCCcEEEEEE
Confidence 9999999986
No 160
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=2.7e-18 Score=149.49 Aligned_cols=273 Identities=9% Similarity=0.036 Sum_probs=168.4
Q ss_pred CccceeEEEEEeeCCCcceEEEEecCC----c-EEEEEcCCC-ceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGGN----R-VTVYQCLEG-GVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~d----~-i~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
+...+..++|+| +|++|++++.+ + |.+|++... ..+..+.... .+......+++ +++ +|++++
T Consensus 48 ~~~~p~~l~~sp----dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~--~~~~~p~~~~~----dg~-~l~~~~ 116 (361)
T 3scy_A 48 EVANPSYLIPSA----DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK--TMGADPCYLTT----NGK-NIVTAN 116 (361)
T ss_dssp ECSCCCSEEECT----TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE--CSSSCEEEEEE----CSS-EEEEEE
T ss_pred cCCCCceEEECC----CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec--cCCCCcEEEEE----CCC-EEEEEE
Confidence 677788899999 78888888774 3 999998753 2333333211 12233334443 677 555554
Q ss_pred -cCCeEEEEECCCCeeEE---EEEec-----------CCceeEEEEcCCCCc-EEEEceeeeEEeeccceeeeeeeccce
Q 016185 106 -INGIIRVIDVSNEKLHK---SFVGH-----------GDSINEIRTQPLKPS-LVVSASKVIIISSLSLICLLLFIRSNC 169 (394)
Q Consensus 106 -~dg~i~vwd~~~~~~~~---~~~~~-----------~~~v~~~~~~~~~~~-~l~s~~~~i~~~~~~~~~~~~~~~~~~ 169 (394)
.++.|.+|++.....+. ....+ ...+.+++|+| +++ ++++...
T Consensus 117 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~-------------------- 175 (361)
T 3scy_A 117 YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLG-------------------- 175 (361)
T ss_dssp TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETT--------------------
T ss_pred CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCC--------------------
Confidence 68999999997543221 11111 22357899999 555 5556556
Q ss_pred eeeccCCcEEEEEecCCcE------E------EEeeccCCCcccEEEEEecCCCCeeEEeec-cCCcEEEEEccccceee
Q 016185 170 LRVGQDESVRLWNVQTGIC------I------LIFAGAGGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKEFWTYV 236 (394)
Q Consensus 170 ~~~~~d~~i~vwd~~~~~~------~------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~ 236 (394)
++.|.+|++..... + ..... .....+..++|+| +++++++++ .++.|.+||+.++....
T Consensus 176 -----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~g~~~~ 247 (361)
T 3scy_A 176 -----TDQIHKFNINPNANADNKEKFLTKGTPEAFKV--APGSGPRHLIFNS-DGKFAYLINEIGGTVIAFRYADGMLDE 247 (361)
T ss_dssp -----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC--CTTCCEEEEEECT-TSSEEEEEETTTCEEEEEEEETTEEEE
T ss_pred -----CCEEEEEEEcCCCCcccccceeecccccceec--CCCCCCeEEEEcC-CCCEEEEEcCCCCeEEEEEecCCceEE
Confidence 88999999875431 1 11221 3456678999999 887666655 68999999998632110
Q ss_pred ccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec--CCeEEEecCCCCCCCCCCCcceecccccC
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV--DNEIVLWEPKMKEQSPGEGTADILQKYPV 312 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~~~ 312 (394)
. ..+.....+......++|+ |++++++.. ++.|.+|++..... ....+..+..
T Consensus 248 ~------------------~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g-----~~~~~~~~~~ 304 (361)
T 3scy_A 248 I------------------QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG-----TLTKVGYQLT 304 (361)
T ss_dssp E------------------EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC-----CEEEEEEEEC
T ss_pred e------------------EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC-----cEEEeeEecC
Confidence 0 0111222333456788887 777766555 48999999863210 1112333333
Q ss_pred CCCCeEEEEEeecCCcceEEEEe-CCCcEEEEEecCCCceeeEEeccCCccCCeeEEEec
Q 016185 313 PECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS 371 (394)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 371 (394)
...+..++|+|++ ++|++++ .++.|.+|++...... +..+....+...+.+++|.
T Consensus 305 -g~~~~~~~~spdg--~~l~~~~~~~~~v~v~~~d~~~g~-~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 305 -GIHPRNFIITPNG--KYLLVACRDTNVIQIFERDQATGL-LTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp -SSCCCEEEECTTS--CEEEEEETTTTEEEEEEECTTTCC-EEECSCCEECSSEEEEEEE
T ss_pred -CCCCceEEECCCC--CEEEEEECCCCCEEEEEEECCCCc-EeecceeeeCCCCeEEEEc
Confidence 3456789999999 5666666 6799999877643222 2222222344578888885
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=6e-20 Score=174.73 Aligned_cols=314 Identities=8% Similarity=-0.035 Sum_probs=188.9
Q ss_pred eeeeeccCcc---ceeEEEEEeeCCCcceEEEEecC---------Cc-EEEEEcCCCceeEEeeecccCCcccceEEEEE
Q 016185 25 VTNKLQEGKR---PLYAVVFNFIDSRYFNVFATVGG---------NR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSW 91 (394)
Q Consensus 25 ~~~~~~~h~~---~v~~i~~sp~~~~~~~~las~~~---------d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 91 (394)
....+.+|.. .|.+++||| ||++||+++. ++ |++||+.+++.+...+ ....+..++|
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~Sp----Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~------l~~~~~~~~~ 117 (719)
T 1z68_A 48 SYTILSNRTMKSVNASNYGLSP----DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE------LPRPIQYLCW 117 (719)
T ss_dssp EEEEECHHHHHTTTCSEEEECT----TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC------CCSSBCCEEE
T ss_pred EEEEEccccccccceeeEEECC----CCCeEEEEecCceeEEeecceEEEEEECCCCcccccee------cCcccccceE
Confidence 3444454544 499999999 8999998876 45 9999998887521111 1234667888
Q ss_pred EEcCCCCcEEEEeecCCeEEEEECCCCeeEEEE-EecCCce-----------------eEEEEcCCCCcEEEEcee---e
Q 016185 92 ACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF-VGHGDSI-----------------NEIRTQPLKPSLVVSASK---V 150 (394)
Q Consensus 92 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~l~s~~~---~ 150 (394)
+ |||+ .|+.+. ++.|++|++.+++..+.. .++...| .+++|+| +++.|++++. .
T Consensus 118 S--PDG~-~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~ 192 (719)
T 1z68_A 118 S--PVGS-KLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTD 192 (719)
T ss_dssp C--SSTT-CEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTT
T ss_pred C--CCCC-EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCC
Confidence 7 9999 787775 789999999887765432 2222222 4899999 7788887764 1
Q ss_pred eEEeeccc---------eeeeeeeccceeeeccCCcEEEEEecCCcEE--EEee---ccCCCcccEEEEEecCCCCeeEE
Q 016185 151 IIISSLSL---------ICLLLFIRSNCLRVGQDESVRLWNVQTGICI--LIFA---GAGGHRNEVLSVDFHPSDIYRIA 216 (394)
Q Consensus 151 i~~~~~~~---------~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~--~~~~---~~~~~~~~i~~~~~~~~~~~~l~ 216 (394)
+..|.+.. ....+...+ .......|++||+.+++.. ..+. .+.+|...+..++|+| |+.+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g---~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-D~~~~~ 268 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAG---AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT-DERVCL 268 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTT---SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS-SSEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCC---CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC-CCeEEE
Confidence 11111100 000000000 0012337999999887642 1121 0125788899999999 788777
Q ss_pred eeccC----CcEEEEE----ccccceeeccccccCCCCCCCCccccccceeee----ecCCCceE-----EEEEe--CcE
Q 016185 217 SCGMD----NTVKIWS----MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA----SVHSNYVD-----CNRWL--GDF 277 (394)
Q Consensus 217 s~~~d----g~v~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~-----~~~~~--~~~ 277 (394)
+.... ..|.+|| +.+++. .... ..|...+. .+.|+ |+.
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 325 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTWDC-----------------------PKTQEHIEESRTGWAGGFFVSTPVFSYDAIS 325 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSEEC-----------------------CGGGEEEEECSSSCSSSSSCCCCEECTTSSC
T ss_pred EEeccccCeEEEEEEcccCCCCCCce-----------------------EEEEecccccCCceEccccCCccEECCCCCe
Confidence 74432 3488888 665321 1112 34555555 67776 664
Q ss_pred EE--EeecCC--eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeC----CCcEEEEEecCCC
Q 016185 278 IL--SKSVDN--EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR----EGKIFVWELQSSP 349 (394)
Q Consensus 278 l~--~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~ 349 (394)
++ +...+| .|.+||+.+++ ...+..+...+..+.++ +++ .+++++.. ++..++|.+....
T Consensus 326 l~~~~~~~~g~~~l~~~~~~~~~----------~~~lt~~~~~v~~~~~~-d~~-~i~~~~~~~~~~~~~~~l~~~~~~~ 393 (719)
T 1z68_A 326 YYKIFSDKDGYKHIHYIKDTVEN----------AIQITSGKWEAINIFRV-TQD-SLFYSSNEFEEYPGRRNIYRISIGS 393 (719)
T ss_dssp EEEEEECTTSCEEEEEESSCSTT----------CEECSCSSSCEEEEEEE-CSS-EEEEEESCGGGCTTCBEEEEEECSS
T ss_pred EEEEEEccCCceEEEEEECCCCc----------eEecccCceEEEEEEEE-eCC-EEEEEEecCCCCCceEEEEEEeCCC
Confidence 43 344555 57777876653 22333445567777777 664 34444444 4889999887521
Q ss_pred c-eeeEEec--cCCccCCeeEEEeccCCCEEEE-eccC--CeEEEEEcC
Q 016185 350 P-VLIARLS--HAQSKSPIRQTAMSYDGSTILS-CCED--GAIWRWDAI 392 (394)
Q Consensus 350 ~-~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s-~~~d--g~i~iwd~~ 392 (394)
. .....+. ..+|...+..+.|+|++++++. ++.+ ..+++||+.
T Consensus 394 g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~ 442 (719)
T 1z68_A 394 YPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGR 442 (719)
T ss_dssp SSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSS
T ss_pred CCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECC
Confidence 1 1123333 1135567888999999987774 3333 467888874
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=9.1e-20 Score=173.61 Aligned_cols=286 Identities=10% Similarity=0.069 Sum_probs=181.4
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC-----
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN----- 107 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d----- 107 (394)
.....+++|+| +|++++++ ++.|++||+.+++....+..+............+|+ |||+ +|+.++.+
T Consensus 16 ~~~~~~~~w~~----dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S--pdg~-~l~~~~~~~~~~r 87 (740)
T 4a5s_A 16 RLKLYSLRWIS----DHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSIS--PDGQ-FILLEYNYVKQWR 87 (740)
T ss_dssp CCCCCCEEECS----SSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEEC--TTSS-EEEEEEEEEECSS
T ss_pred cccccccEECC----CCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEEC--CCCC-EEEEEECCeeeEE
Confidence 34467899999 78999997 444999999999877666643322222222335555 9999 88888765
Q ss_pred ----CeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEe
Q 016185 108 ----GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183 (394)
Q Consensus 108 ----g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~ 183 (394)
+.+.+||+.+++.. .+..|...+...+||| +++.|+.+. ++.|++||+
T Consensus 88 ~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~~--------------------------~~~i~~~~~ 139 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSP-VGHKLAYVW--------------------------NNDIYVKIE 139 (740)
T ss_dssp SCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECS-STTCEEEEE--------------------------TTEEEEESS
T ss_pred EccceEEEEEECCCCcEE-EcccCCCcceeeEECC-CCCEEEEEE--------------------------CCeEEEEEC
Confidence 56779999988754 4566778899999999 777787775 889999999
Q ss_pred cCCcEEEEeeccCCCcccE-----------------EEEEecCCCCeeEEeeccCCc-EEEEEccccceeeccccccCCC
Q 016185 184 QTGICILIFAGAGGHRNEV-----------------LSVDFHPSDIYRIASCGMDNT-VKIWSMKEFWTYVEKSFTWTDL 245 (394)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~~l~s~~~dg~-v~iwd~~~~~~~~~~~~~~~~~ 245 (394)
.+++..+... .++...+ ..+.|+| |++.|+.++.|.. +.+|++......
T Consensus 140 ~~~~~~~lt~--~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~---------- 206 (740)
T 4a5s_A 140 PNLPSYRITW--TGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDE---------- 206 (740)
T ss_dssp TTSCCEECCS--CCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCST----------
T ss_pred CCCceEEEcC--CCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCC----------
Confidence 8887554322 1232222 3489999 9998888876554 889887652100
Q ss_pred CCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCC---CCCCCCCCcceecc--cccCCCCCeE
Q 016185 246 PSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKM---KEQSPGEGTADILQ--KYPVPECDIW 318 (394)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~---~~~~~~~~~~~~~~--~~~~~~~~i~ 318 (394)
..+...+..+.+. |.. .....|++||+.+ ++... ...... .+..+...+.
T Consensus 207 ----------------~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 207 ----------------SLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNAT---SIQITAPASMLIGDHYLC 263 (740)
T ss_dssp ----------------TCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCC---EEEECCCHHHHTSCEEEE
T ss_pred ----------------CCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcce---EEEecCCccCCCCCeEEE
Confidence 0122222333332 211 1223689999988 52100 000000 0113666789
Q ss_pred EEEEeecCCcceEEEEe----CCCcEEEEEecCCC----ceeeEEeccCCccCCee-----EEEeccCCCEEE-Eec-cC
Q 016185 319 FIKFSCDFHYNAAAIGN----REGKIFVWELQSSP----PVLIARLSHAQSKSPIR-----QTAMSYDGSTIL-SCC-ED 383 (394)
Q Consensus 319 ~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~v~-----~~~~s~~~~~l~-s~~-~d 383 (394)
.++|+|++ ..++... .+..|++||+.+++ ......+...+|...|. ..+|+|||+.|+ ..+ .+
T Consensus 264 ~~~wspdg--~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~ 341 (740)
T 4a5s_A 264 DVTWATQE--RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEE 341 (740)
T ss_dssp EEEEEETT--EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTT
T ss_pred EEEEeCCC--eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCC
Confidence 99999999 4444432 23479999999886 22222221114444444 688999999877 555 33
Q ss_pred C--eEEEEEcC
Q 016185 384 G--AIWRWDAI 392 (394)
Q Consensus 384 g--~i~iwd~~ 392 (394)
| .|++||+.
T Consensus 342 G~~~l~~~~~~ 352 (740)
T 4a5s_A 342 GYRHICYFQID 352 (740)
T ss_dssp SCEEEEEEETT
T ss_pred CceEEEEEECC
Confidence 4 58888865
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=3.9e-18 Score=160.75 Aligned_cols=292 Identities=9% Similarity=-0.019 Sum_probs=186.0
Q ss_pred eeccCccceeEEEEEeeCCCcceEEEEe--cCCc-EEEEEcCCCceeEEeeecccCCcccceE---------EEEEEEcC
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFNVFATV--GGNR-VTVYQCLEGGVIAALQSYVDEDKEESFY---------TVSWACNV 95 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~~las~--~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~~~~ 95 (394)
.+.+|...|..++|++ +.-++++. +.++ ..||....+.....+.. +...+. ...|+.+|
T Consensus 18 ~~~~~~~~~~~~~~s~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~SP 88 (662)
T 3azo_A 18 LVASRSGRPACVGAVG----DEVWWVAPRPAEAGRATLVRRRADGAEESALP-----APWNVRNRVFEYSGFPWAGVPRP 88 (662)
T ss_dssp HHHHTCSCCEEEEEET----TEEEEEEEETTTTTEEEEEEECTTSCEEESSC-----TTCCBCCCGGGTCCCCEEEECCS
T ss_pred HHhhcCCccceeEEcC----CeEEEEecCcccCCcEEEEEECCCCCcceeCC-----CCccccccccccCCccceeeeec
Confidence 4678999999999998 56677776 4455 88998655555555542 233333 34555459
Q ss_pred CCCcE-EEEe-ecCCeEEEEECC--CCeeEEEEEe-----cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeec
Q 016185 96 DGIPF-LVAG-GINGIIRVIDVS--NEKLHKSFVG-----HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIR 166 (394)
Q Consensus 96 ~~~~~-l~s~-~~dg~i~vwd~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~ 166 (394)
||+ . |+.+ ..+..|.++++. .......+.. |...+..++|+| +++.|+.++.
T Consensus 89 Dg~-~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~----------------- 149 (662)
T 3azo_A 89 AGG-PLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAE----------------- 149 (662)
T ss_dssp SSS-CEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEE-----------------
T ss_pred CCC-eEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEe-----------------
Confidence 999 5 5544 446677777765 2033445554 567789999999 7778887776
Q ss_pred cceeeeccC----------CcEEEEEecC------CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC--------C
Q 016185 167 SNCLRVGQD----------ESVRLWNVQT------GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD--------N 222 (394)
Q Consensus 167 ~~~~~~~~d----------~~i~vwd~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d--------g 222 (394)
+ ..|++||+.+ ++...... .+...+..++|+| |++.|+.++.+ .
T Consensus 150 --------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~ 217 (662)
T 3azo_A 150 --------EFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD---DAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGT 217 (662)
T ss_dssp --------EECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC---SCSSEECCCEECT-TSSEEEEEEECTTCCTTTCE
T ss_pred --------cccCCCCCCceeEEEEEECCCCccccCCceeEEEe---cCCCcccCceECC-CCCEEEEEECCCCCCCCCCc
Confidence 5 5899999987 55543330 2456788899999 99988877755 3
Q ss_pred cEEEEEcc-ccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCC--eEEEecCCCCCC
Q 016185 223 TVKIWSMK-EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN--EIVLWEPKMKEQ 297 (394)
Q Consensus 223 ~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg--~i~~~d~~~~~~ 297 (394)
.|++||+. ++.. .........|...+..+.|+ |++++++..++ .|.+||+.+++.
T Consensus 218 ~i~~~d~~~~g~~--------------------~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 218 ELKTARVTEDGRF--------------------ADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp EEEEEEECTTSCE--------------------EEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred EEEEEEECCCCcc--------------------cccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 79999998 4310 01223334456788999997 67778887888 677777655531
Q ss_pred CCCCCcceecccccCC------CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEE-Ee
Q 016185 298 SPGEGTADILQKYPVP------ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQT-AM 370 (394)
Q Consensus 298 ~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~-~~ 370 (394)
. .+...... ...+..++|+|++ .++++++. +.++||.+..... ....+. .+...+..+ ++
T Consensus 278 ~-------~l~~~~~~~~~p~w~~~~~~~~~~~~~--~~~~~~~~-~~~~l~~~d~~~~-~~~~l~--~~~~~~~~~~s~ 344 (662)
T 3azo_A 278 T-------QLCRREEEFAGPLWTPGMRWFAPLANG--LIAVVHGK-GAAVLGILDPESG-ELVDAA--GPWTEWAATLTV 344 (662)
T ss_dssp E-------ESSCCSSBSSCCCCSTTCCSEEECTTS--CEEEEEBS-SSCEEEEEETTTT-EEEECC--SSCCEEEEEEEE
T ss_pred e-------ecccccccccCccccccCceEeEeCCC--EEEEEEEc-CccEEEEEECCCC-cEEEec--CCCCeEEEEEec
Confidence 1 11110000 0014568888888 58888888 9999996653321 245565 556677766 44
Q ss_pred ccCCCEEEEeccCCe--EEEEEcC
Q 016185 371 SYDGSTILSCCEDGA--IWRWDAI 392 (394)
Q Consensus 371 s~~~~~l~s~~~dg~--i~iwd~~ 392 (394)
+.+.-++++++.+.. |++||+.
T Consensus 345 ~~~~~~~~~~~~~~~~~i~~~d~~ 368 (662)
T 3azo_A 345 SGTRAVGVAASPRTAYEVVELDTV 368 (662)
T ss_dssp ETTEEEEEEEETTEEEEEEEEETT
T ss_pred CCCEEEEEEcCCCCCCEEEEEECC
Confidence 433333444555544 5555543
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=6.8e-19 Score=155.26 Aligned_cols=287 Identities=11% Similarity=0.023 Sum_probs=172.9
Q ss_pred eeEEEEEeeCCCcceEEEEecCC----cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEE
Q 016185 36 LYAVVFNFIDSRYFNVFATVGGN----RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIR 111 (394)
Q Consensus 36 v~~i~~sp~~~~~~~~las~~~d----~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~ 111 (394)
+..++|+| +|++|+..... .|.+||+.+++...... .+........|+ |+|+ .|+.++.++.|.
T Consensus 38 ~~~~~~Sp----dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-----~~~~~~~~~~~s--pdg~-~l~~~~~~~~l~ 105 (396)
T 3c5m_A 38 FYQKCFTQ----DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-----GKGDNTFGGFIS--TDER-AFFYVKNELNLM 105 (396)
T ss_dssp TTSCCBCT----TSCEEEEEECTTSSCEEEEEETTTTEEEECCC-----SSCBCTTTCEEC--TTSS-EEEEEETTTEEE
T ss_pred eecCcCCC----CCCEEEEEEecCCCceEEEEECCCCcEEEeec-----CCCCccccceEC--CCCC-EEEEEEcCCcEE
Confidence 78899999 78887776443 28889988776433222 122222235666 9999 898888888999
Q ss_pred EEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee--eeEEeeccceeeeeeecc-ceeee-----ccCCcEEEEEe
Q 016185 112 VIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK--VIIISSLSLICLLLFIRS-NCLRV-----GQDESVRLWNV 183 (394)
Q Consensus 112 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~--~i~~~~~~~~~~~~~~~~-~~~~~-----~~d~~i~vwd~ 183 (394)
+||+.+++.......+.. |++ ++..|+..+. ...+|.. ...+.+++ .++.. ..+..|.+||+
T Consensus 106 ~~d~~~~~~~~~~~~~~~------~~~-~g~~l~~~~~~~~~~~~~~---~~~~spdg~~~~~~~~~~~~~~~~l~~~d~ 175 (396)
T 3c5m_A 106 KVDLETLEEQVIYTVDEE------WKG-YGTWVANSDCTKLVGIEIL---KRDWQPLTSWEKFAEFYHTNPTCRLIKVDI 175 (396)
T ss_dssp EEETTTCCEEEEEECCTT------EEE-EEEEEECTTSSEEEEEEEE---GGGCCCCCSHHHHHHHHHTCCCEEEEEEET
T ss_pred EEECCCCCcEEEEecccc------cCC-CCCEEEeccCCcccccccc---ccccCCCCcceeeeeeccCCCcceEEEEEC
Confidence 999988876665554443 444 3333333222 1111110 01111222 22221 34678999999
Q ss_pred cCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC------CcEEEEEccccceeeccccccCCCCCCCCccccccc
Q 016185 184 QTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFP 257 (394)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (394)
.+++...... +...+..+.|+|.++..|+..+.+ ..|.+||+...+
T Consensus 176 ~~g~~~~~~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~------------------------ 227 (396)
T 3c5m_A 176 ETGELEVIHQ----DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN------------------------ 227 (396)
T ss_dssp TTCCEEEEEE----ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC------------------------
T ss_pred CCCcEEeecc----CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc------------------------
Confidence 8887665554 667789999998445655554433 368888876521
Q ss_pred eeeeecC--CCceEEEEEe--CcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEee-cCC
Q 016185 258 VFIASVH--SNYVDCNRWL--GDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC-DFH 327 (394)
Q Consensus 258 ~~~~~~~--~~~i~~~~~~--~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 327 (394)
...+..+ ...+..+.|+ |++|+.++.+ +.|.+||+.+++. ..+..... .. +.|+| ++
T Consensus 228 ~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------~~l~~~~~----~~-~~~s~~dg- 294 (396)
T 3c5m_A 228 VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-------EEVMVMPP----CS-HLMSNFDG- 294 (396)
T ss_dssp CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-------EEEEECCS----EE-EEEECSSS-
T ss_pred eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-------EEeeeCCC----CC-CCccCCCC-
Confidence 1111112 2346777887 6767666544 4599999987642 11222221 23 88999 98
Q ss_pred cceEEEEe----------------CCCcEEEEEecCCCceeeEEeccCCccC-----------CeeEEEeccCCCEEEEe
Q 016185 328 YNAAAIGN----------------REGKIFVWELQSSPPVLIARLSHAQSKS-----------PIRQTAMSYDGSTILSC 380 (394)
Q Consensus 328 ~~~l~~~~----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~s~ 380 (394)
.++++++ .+..|++||+.+++.. .+. .+.. .+..++|+|||+.|+.+
T Consensus 295 -~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~l~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 295 -SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ---KLC--KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp -SEEEEEECCC----------CCCCCCEEEEEETTTTBCC---EEE--ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred -ceEEEecCCcceeeccccccccCCCCcEEEEecccCceE---Ecc--CCCCccccccccccCCCCCceEccCCCeEEEE
Confidence 4666543 3478999999877533 232 2222 25667899999988876
Q ss_pred cc-CCeEEEEEc
Q 016185 381 CE-DGAIWRWDA 391 (394)
Q Consensus 381 ~~-dg~i~iwd~ 391 (394)
+. ++...||.+
T Consensus 369 s~~~~~~~l~~~ 380 (396)
T 3c5m_A 369 SDFEGVPAIYIA 380 (396)
T ss_dssp ECTTSSCEEEEE
T ss_pred ecCCCCceEEEE
Confidence 64 455555543
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=1.1e-16 Score=134.64 Aligned_cols=238 Identities=13% Similarity=0.093 Sum_probs=168.1
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEe------cCCceeEEEEcCCCCcEEEEc-eeeeEEee
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG------HGDSINEIRTQPLKPSLVVSA-SKVIIISS 155 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~s~-~~~i~~~~ 155 (394)
-.....+++. ++|. ++++...++.|.+||.. ++.+..+.. +...+..+++.+.++.++++. +.
T Consensus 29 ~~~p~~v~~~--~~g~-l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------ 98 (286)
T 1q7f_A 29 FTEPSGVAVN--AQND-IIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------ 98 (286)
T ss_dssp BSCEEEEEEC--TTCC-EEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG------
T ss_pred cCCCceEEEC--CCCC-EEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC------
Confidence 3455667766 8898 88888889999999976 666666642 335678999953266666665 34
Q ss_pred ccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEcccccee
Q 016185 156 LSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~ 235 (394)
++.|.+|| .+++.+..+.. .+...+.+++++| +++++++...++.|.+||.....
T Consensus 99 -------------------~~~i~~~d-~~g~~~~~~~~--~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~-- 153 (286)
T 1q7f_A 99 -------------------THQIQIYN-QYGQFVRKFGA--TILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNV-- 153 (286)
T ss_dssp -------------------GCEEEEEC-TTSCEEEEECT--TTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCE--
T ss_pred -------------------CCEEEEEC-CCCcEEEEecC--ccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCCE--
Confidence 67899999 56777766642 3446789999999 88888888888999999965411
Q ss_pred eccccccCCCCCCCCccccccceeeee--cCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccccc
Q 016185 236 VEKSFTWTDLPSKFPTKYVQFPVFIAS--VHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
+..+. .+...+..++++ ++++++...++.|++||.... .+..+.
T Consensus 154 ----------------------~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~----------~~~~~~ 201 (286)
T 1q7f_A 154 ----------------------LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ----------YLRQIG 201 (286)
T ss_dssp ----------------------EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC----------EEEEES
T ss_pred ----------------------EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC----------EEEEEc
Confidence 11221 344567888887 667777777999999997543 233332
Q ss_pred CC--CCCeEEEEEeecCCcceEEEEeCCC-cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEE
Q 016185 312 VP--ECDIWFIKFSCDFHYNAAAIGNREG-KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 388 (394)
Q Consensus 312 ~~--~~~i~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 388 (394)
.+ ...+..+++++++ .++++...++ .|.+||.... .+..+........+.+++++|+|+++++ +.|+.|++
T Consensus 202 ~~g~~~~p~~i~~d~~G--~l~v~~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v 275 (286)
T 1q7f_A 202 GEGITNYPIGVGINSNG--EILIADNHNNFNLTIFTQDGQ---LISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYI 275 (286)
T ss_dssp CTTTSCSEEEEEECTTC--CEEEEECSSSCEEEEECTTSC---EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEE
T ss_pred cCCccCCCcEEEECCCC--CEEEEeCCCCEEEEEECCCCC---EEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEE
Confidence 22 3567899999998 5777777775 9999995432 4444542223345789999999987777 57999999
Q ss_pred EEcCC
Q 016185 389 WDAIP 393 (394)
Q Consensus 389 wd~~~ 393 (394)
|++..
T Consensus 276 ~~~~~ 280 (286)
T 1q7f_A 276 YRYVQ 280 (286)
T ss_dssp EECSC
T ss_pred EEccc
Confidence 99854
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.81 E-value=6.4e-17 Score=140.32 Aligned_cols=263 Identities=13% Similarity=0.066 Sum_probs=170.7
Q ss_pred cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee----------cCCeEEEEECCCCeeEEEEEec-
Q 016185 59 RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH- 127 (394)
Q Consensus 59 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~- 127 (394)
.|.+||..+++.+..+.. ...+ .++++ |+|+ +++++. .++.|.+||..+.+.+.++...
T Consensus 32 ~v~v~D~~t~~~~~~i~~-----g~~p--~i~~s--pdg~-~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~ 101 (361)
T 2oiz_A 32 RVHVYDYTNGKFLGMVPT-----AFNG--HVQVS--NDGK-KIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPP 101 (361)
T ss_dssp EEEEEETTTCCEEEEEEC-----CEEE--EEEEC--TTSS-EEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECT
T ss_pred eEEEEECCCCeEEEEecC-----CCCC--ceEEC--CCCC-EEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCc
Confidence 499999999988777662 2333 45555 9999 777775 3678999999999998888743
Q ss_pred -----CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE-eeccCCCccc
Q 016185 128 -----GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI-FAGAGGHRNE 201 (394)
Q Consensus 128 -----~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~~ 201 (394)
......++++| ++++|+++.. +.+++|.+||+.+++.+.. +. ...
T Consensus 102 ~~~~~g~~p~~i~~sp-dg~~l~v~n~-----------------------~~~~~v~v~d~~~~~~~~~~i~----~~~- 152 (361)
T 2oiz_A 102 KRVQGLNYDGLFRQTT-DGKFIVLQNA-----------------------SPATSIGIVDVAKGDYVEDVTA----AAG- 152 (361)
T ss_dssp TBCCBCCCGGGEEECT-TSSEEEEEEE-----------------------SSSEEEEEEETTTTEEEEEEGG----GTT-
T ss_pred cccccCCCcceEEECC-CCCEEEEECC-----------------------CCCCeEEEEECCCCcEEEEEec----CCC-
Confidence 24567899999 6777777653 0047899999999988877 54 222
Q ss_pred EEEEEecCCCCeeEEeeccCCcEEEEEccc-cceeeccccccCCCCCCCCccccccceeeeecCCCceE-EEEEeCcEEE
Q 016185 202 VLSVDFHPSDIYRIASCGMDNTVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD-CNRWLGDFIL 279 (394)
Q Consensus 202 i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~l~ 279 (394)
...+.+.|.....+++.+.||.+.+|++.. ++...... . ...+..+...+. ....++..++
T Consensus 153 ~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~g~~~~ 215 (361)
T 2oiz_A 153 CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSR-S----------------KQMFSVKDDPIFIAPALDKDKAH 215 (361)
T ss_dssp EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEE-C----------------CCCSCTTTSCBCSCCEECSSEEE
T ss_pred cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeecc-c----------------cceEcCCCCceEEEecccCCEEE
Confidence 233566773446788889999999999865 22110000 0 000111111110 0012255556
Q ss_pred EeecCCeEEEecCCCCCCCCCCCcceecccccC----------CCCCeEEEEEeecCCcceEEEEeC-----------CC
Q 016185 280 SKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV----------PECDIWFIKFSCDFHYNAAAIGNR-----------EG 338 (394)
Q Consensus 280 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~l~~~~~-----------dg 338 (394)
..+.++.+.++|+...... ....+.. .......++|+|++. .++++.. .+
T Consensus 216 ~~~~~~~v~v~d~~~~~~~-------~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~--~lyv~~~~~~~~~~~~~~~~ 286 (361)
T 2oiz_A 216 FVSYYGNVYSADFSGDEVK-------VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG--RMYVFMHPDGKEGTHKFPAA 286 (361)
T ss_dssp EEBTTSEEEEEECSSSSCE-------EEEEEESCCHHHHHTTCEECCSSCEEEETTTT--EEEEEEESSCCTTCTTCCCS
T ss_pred EEeCCCeEEEEEecCCCce-------ecccccccCccccccccccCCeeEEEEecCCC--eEEEEEccCCCcccccCCCc
Confidence 6677899999998754311 0111000 001112368999985 4444322 35
Q ss_pred cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 339 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.|.+||+.+. +.+.++. .+. +.+++|+|||++|++++. +.|.+||.++
T Consensus 287 ~v~viD~~t~--~~v~~i~--~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 287 EIWVMDTKTK--QRVARIP--GRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp EEEEEETTTT--EEEEEEE--CTT--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred eEEEEECCCC--cEEEEEe--cCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 8999999887 4667776 444 899999999999999887 9999999875
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=2.1e-17 Score=144.03 Aligned_cols=253 Identities=13% Similarity=0.093 Sum_probs=161.4
Q ss_pred CccceeEEEEEeeCCCcceEEEEecCCcEEEEEcC-CCceeEEeeecccCCcccceEEEEEEEcCCCCc-EEEEee----
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCL-EGGVIAALQSYVDEDKEESFYTVSWACNVDGIP-FLVAGG---- 105 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~s~~---- 105 (394)
+...+..++|+| +|++|++++.+.|.+|++. +++...... +.. . +....++|+ |+|+. +++++.
T Consensus 38 ~~~~~~~~a~sp----dg~~l~~~~~~~v~~~~~~~~g~~~~~~~-~~~--~-g~~~~~~~s--pdg~~l~~~~~~~~~~ 107 (365)
T 1jof_A 38 QDEPISWMTFDH----ERKNIYGAAMKKWSSFAVKSPTEIVHEAS-HPI--G-GHPRANDAD--TNTRAIFLLAAKQPPY 107 (365)
T ss_dssp TTCCCSEEEECT----TSSEEEEEEBTEEEEEEEEETTEEEEEEE-EEC--C-SSGGGGCTT--SCCEEEEEEECSSTTC
T ss_pred CCCCCcEEEECC----CCCEEEEEccceEEEEEECCCCCEEEeeE-eec--C-CCCccEEEC--CCCCEEEEEEecCCcc
Confidence 345788999999 7888888877789999987 666543322 110 1 112234554 99983 244553
Q ss_pred ---------cCCeEEEEECC-CCeeEEEEEe----cCCceeEEEEcCCCCcEEEEce-eeeEEeeccceeeeeeecccee
Q 016185 106 ---------INGIIRVIDVS-NEKLHKSFVG----HGDSINEIRTQPLKPSLVVSAS-KVIIISSLSLICLLLFIRSNCL 170 (394)
Q Consensus 106 ---------~dg~i~vwd~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s~~-~~i~~~~~~~~~~~~~~~~~~~ 170 (394)
.+|.+.+|++. +++....+.. +...+.+++|+| ++++++++. .
T Consensus 108 ~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~--------------------- 165 (365)
T 1jof_A 108 AVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLT--------------------- 165 (365)
T ss_dssp CEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETT---------------------
T ss_pred eeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCC---------------------
Confidence 68999999997 4665544442 456789999999 666666544 4
Q ss_pred eeccCCcEEEEEec-CCcEEE--EeeccCCCcccEEEEEecCCCCeeEEeec-cCCcEEEEEccc--cceeeccccccCC
Q 016185 171 RVGQDESVRLWNVQ-TGICIL--IFAGAGGHRNEVLSVDFHPSDIYRIASCG-MDNTVKIWSMKE--FWTYVEKSFTWTD 244 (394)
Q Consensus 171 ~~~~d~~i~vwd~~-~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~--~~~~~~~~~~~~~ 244 (394)
++.|++||+. +++... .+.. ..+...+..++|+| +++++++++ .++.|.+|++.. ++.....
T Consensus 166 ----~~~v~~~~~~~~g~~~~~~~~~~-~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~------ 233 (365)
T 1jof_A 166 ----ANKLWTHRKLASGEVELVGSVDA-PDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTH------ 233 (365)
T ss_dssp ----TTEEEEEEECTTSCEEEEEEEEC-SSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEE------
T ss_pred ----CCEEEEEEECCCCCEEEeeeEec-CCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEcc------
Confidence 6799999998 676532 2220 01356789999999 888777665 478999998763 2210000
Q ss_pred CCCCCCccccccceeee----ecCCC------ceEEEE-Ee--CcEEEEeecC-C-----eEEEecCC-CCCCCCCCCcc
Q 016185 245 LPSKFPTKYVQFPVFIA----SVHSN------YVDCNR-WL--GDFILSKSVD-N-----EIVLWEPK-MKEQSPGEGTA 304 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~----~~~~~------~i~~~~-~~--~~~l~~~~~d-g-----~i~~~d~~-~~~~~~~~~~~ 304 (394)
..+..+ .+|.. .+..++ |+ |++++++..+ + .|.+|++. +++.
T Consensus 234 -----------~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~------- 295 (365)
T 1jof_A 234 -----------HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSI------- 295 (365)
T ss_dssp -----------EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCE-------
T ss_pred -----------ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCE-------
Confidence 001111 12222 577888 87 7777766543 2 89999986 3321
Q ss_pred eecc-cccCCCCCeEEEEEee---cCCcceEEEEeC-CCcEEEEEecCC
Q 016185 305 DILQ-KYPVPECDIWFIKFSC---DFHYNAAAIGNR-EGKIFVWELQSS 348 (394)
Q Consensus 305 ~~~~-~~~~~~~~i~~~~~~~---~~~~~~l~~~~~-dg~i~iwd~~~~ 348 (394)
..+. ....+......++|+| ++ .+|++++. ++.|.+|++...
T Consensus 296 ~~~~~~~~~~~~~~~~~a~sp~~~dg--~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 296 EKQLFLSPTPTSGGHSNAVSPCPWSD--EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEEEECSSCCTTCCCEEECTTCT--TEEEEECSSSCEEEEEEEETT
T ss_pred EEeeeeeecCCCCcccceecCCCcCC--CEEEEEEcCCCeEEEEEEchh
Confidence 1111 1222333455789999 78 57887776 589999999876
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=5.8e-17 Score=139.00 Aligned_cols=243 Identities=13% Similarity=0.092 Sum_probs=172.0
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecC------------------------CeEEEEECCCCeeEEEEE-ecCCceeEEEEc
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGIN------------------------GIIRVIDVSNEKLHKSFV-GHGDSINEIRTQ 137 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~d------------------------g~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~ 137 (394)
-+.+..+++. ++|+ ++++...+ +.|.+||..+++.+..+. ++......++++
T Consensus 23 l~~v~~va~d--~~G~-l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALD--SKNN-LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEEC--TTCC-EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEEC--CCCC-EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC
Confidence 3467778776 9998 77777766 479999998888876654 344578899999
Q ss_pred CCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc-EEEEeecc------CCCcccEEEEEecCC
Q 016185 138 PLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI-CILIFAGA------GGHRNEVLSVDFHPS 210 (394)
Q Consensus 138 ~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~------~~~~~~i~~~~~~~~ 210 (394)
| +++++++... ++.|++||..... .+..+... .++......++++|.
T Consensus 100 ~-~g~l~v~d~~-------------------------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~ 153 (329)
T 3fvz_A 100 T-DGNYWVTDVA-------------------------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS 153 (329)
T ss_dssp T-TSCEEEEETT-------------------------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT
T ss_pred C-CCCEEEEECC-------------------------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC
Confidence 9 6678888887 8999999975442 44444210 134457899999985
Q ss_pred CCeeEEeec-cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee----------cCCCceEEEEEe---Cc
Q 016185 211 DIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS----------VHSNYVDCNRWL---GD 276 (394)
Q Consensus 211 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~~~~~---~~ 276 (394)
++.++++.+ .++.|++||... .. +..+. .+-.....++++ +.
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g-~~-----------------------~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~ 209 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSG-KF-----------------------VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ 209 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTS-CE-----------------------EEEECEECCSSSCCTTEESCEEEEEEETTTTE
T ss_pred CCeEEEEeCCCCCeEEEEcCCC-CE-----------------------EEEeccCCCCCCCCCcccCCCcEEEEECCCCE
Confidence 677777775 689999999543 11 11111 122346788886 45
Q ss_pred EEEEeecCCeEEEecCCCCCCCCCCCcceecccc--cCCCCCeEEEEEeecCCcceEEE-------EeCCCcEEEEEecC
Q 016185 277 FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY--PVPECDIWFIKFSCDFHYNAAAI-------GNREGKIFVWELQS 347 (394)
Q Consensus 277 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~-------~~~dg~i~iwd~~~ 347 (394)
++++...++.|++||..+++ .+..+ ..+...+..++|+| + ..+.+ ...+..|++||..+
T Consensus 210 l~v~d~~~~~I~~~~~~~G~---------~~~~~~~~~~~~~~~~~~~~p-g--~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 210 LCVADRENGRIQCFKTDTKE---------FVREIKHASFGRNVFAISYIP-G--FLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EEEEETTTTEEEEEETTTCC---------EEEEECCTTTTTCEEEEEEET-T--EEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred EEEEECCCCEEEEEECCCCc---------EEEEEeccccCCCcceeeecC-C--EEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 67777789999999998665 33333 23455788899998 3 23333 33456899999988
Q ss_pred CCceeeEEec-cCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 348 SPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 348 ~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
++ .+..+. ..++...+.+++++|+|.++++...++.|++|++.
T Consensus 278 g~--~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 278 GE--IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CC--EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred Ce--EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 74 455553 22566789999999999888888899999999975
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.80 E-value=5.4e-17 Score=140.78 Aligned_cols=289 Identities=11% Similarity=0.028 Sum_probs=182.3
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecC----------Cc-EEEEEcCCCceeEEeeecccC-CcccceEEE
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGG----------NR-VTVYQCLEGGVIAALQSYVDE-DKEESFYTV 89 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~----------d~-i~vw~~~~~~~~~~~~~~~~~-~~~~~v~~~ 89 (394)
..++...+..+..+ .++|+| +|++++++.. ++ |.+||..+++.+..+...... .+......+
T Consensus 40 t~~~~~~i~~g~~p--~i~~sp----dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i 113 (361)
T 2oiz_A 40 NGKFLGMVPTAFNG--HVQVSN----DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLF 113 (361)
T ss_dssp TCCEEEEEECCEEE--EEEECT----TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGE
T ss_pred CCeEEEEecCCCCC--ceEECC----CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceE
Confidence 34455667666666 899999 7888888752 33 999999988888777632110 012233446
Q ss_pred EEEEcCCCCcEEEEeec--CCeEEEEECCCCeeEEE-EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeec
Q 016185 90 SWACNVDGIPFLVAGGI--NGIIRVIDVSNEKLHKS-FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIR 166 (394)
Q Consensus 90 ~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~ 166 (394)
+++ |+|+ +|+++.. ++.|.+||+.+++.+.. +. ... ...+.+.|.+...+++.+.
T Consensus 114 ~~s--pdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~----------------- 171 (361)
T 2oiz_A 114 RQT--TDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICG----------------- 171 (361)
T ss_dssp EEC--TTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEET-----------------
T ss_pred EEC--CCCC-EEEEECCCCCCeEEEEECCCCcEEEEEec-CCC-cceeEEcCCCCeeEEEECC-----------------
Confidence 666 9999 7877764 68999999999988777 44 222 2335677856577888888
Q ss_pred cceeeeccCCcEEEEEecC-CcEEEEee---ccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecccccc
Q 016185 167 SNCLRVGQDESVRLWNVQT-GICILIFA---GAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 167 ~~~~~~~~d~~i~vwd~~~-~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
||.+.+|+... ++...... .......++ .+.+.+ ++..++..+.++.+.++|+.............
T Consensus 172 --------dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~ 241 (361)
T 2oiz_A 172 --------DGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPAL-DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSL 241 (361)
T ss_dssp --------TSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEE-CSSEEEEEBTTSEEEEEECSSSSCEEEEEEES
T ss_pred --------CCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecc-cCCEEEEEeCCCeEEEEEecCCCceecccccc
Confidence 99999999865 55442221 000122222 233455 55556666788999999987532111000000
Q ss_pred CCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec-----------CCeEEEecCCCCCCCCCCCcceeccc
Q 016185 243 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV-----------DNEIVLWEPKMKEQSPGEGTADILQK 309 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~-----------dg~i~~~d~~~~~~~~~~~~~~~~~~ 309 (394)
.. .... .....+.....++++ ++.++++.. .+.|.+||+.+.+ .+.+
T Consensus 242 ~~----------~~~~-~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---------~v~~ 301 (361)
T 2oiz_A 242 LN----------DEDK-AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---------RVAR 301 (361)
T ss_dssp CC----------HHHH-HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---------EEEE
T ss_pred cC----------cccc-ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---------EEEE
Confidence 00 0000 000000111113444 555555432 3589999999876 5666
Q ss_pred ccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC
Q 016185 310 YPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 375 (394)
Q Consensus 310 ~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 375 (394)
+..+. ...++|+|++ ++|++++. +.|.+||..++..+.+..+. .+......++++|+|+
T Consensus 302 i~~~~--p~~ia~spdg--~~l~v~n~-~~v~v~D~~t~~l~~~~~i~--~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 302 IPGRD--ALSMTIDQQR--NLMLTLDG-GNVNVYDISQPEPKLLRTIE--GAAEASLQVQFHPVGG 360 (361)
T ss_dssp EECTT--CCEEEEETTT--TEEEEECS-SCEEEEECSSSSCEEEEEET--TSCSSEEEEEECCCSC
T ss_pred EecCC--eeEEEECCCC--CEEEEeCC-CeEEEEECCCCcceeeEEec--cCCCCcEEEEecCCCC
Confidence 66665 8899999999 57777776 99999999998545667765 4557788999999985
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1.8e-17 Score=145.78 Aligned_cols=257 Identities=11% Similarity=0.042 Sum_probs=168.1
Q ss_pred EEEEcCCCceeEEeeecccCCcccceEE-----EEEEEcCCCCcEEEEeec-CC--eEEEEECCCCeeEEEEEecCCcee
Q 016185 61 TVYQCLEGGVIAALQSYVDEDKEESFYT-----VSWACNVDGIPFLVAGGI-NG--IIRVIDVSNEKLHKSFVGHGDSIN 132 (394)
Q Consensus 61 ~vw~~~~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~~~l~s~~~-dg--~i~vwd~~~~~~~~~~~~~~~~v~ 132 (394)
..++..++..+..+.. +...... .+|+ |||+ +|+.++. +| .|.+||+.+++......++...+.
T Consensus 13 ~~~~~~~g~~~~~lt~-----~~~~~~~~~~~~~~~S--pDg~-~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~ 84 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTP-----PDVTCHRNYFYQKCFT--RDGS-KLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF 84 (388)
T ss_dssp EEECTTTCCEEEECSC-----TTSCEECCCTTSCCBC--TTSC-EEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS
T ss_pred EEecCCCCcceEEecC-----CcccccchhhcCccCC--CCCC-EEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc
Confidence 3456667777666653 2322322 5566 9999 7777666 66 488889988887776666666666
Q ss_pred EEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEE--ecCC
Q 016185 133 EIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVD--FHPS 210 (394)
Q Consensus 133 ~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~--~~~~ 210 (394)
.+.|+| +++.|+.++. ++.|++||+.+++....+. .+...+.... ++|
T Consensus 85 ~~~~sp-dg~~l~~~~~-------------------------~~~l~~~d~~~g~~~~~~~---~~~~~~~~~~~~~~~- 134 (388)
T 3pe7_A 85 GGFLSP-DDDALFYVKD-------------------------GRNLMRVDLATLEENVVYQ---VPAEWVGYGTWVANS- 134 (388)
T ss_dssp SCEECT-TSSEEEEEET-------------------------TTEEEEEETTTCCEEEEEE---CCTTEEEEEEEEECT-
T ss_pred ceEEcC-CCCEEEEEeC-------------------------CCeEEEEECCCCcceeeee---chhhcccccceeECC-
Confidence 788999 7788888887 8899999999998777666 3445454343 477
Q ss_pred CCeeEEe----------------------eccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCce
Q 016185 211 DIYRIAS----------------------CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 268 (394)
Q Consensus 211 ~~~~l~s----------------------~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 268 (394)
++.+++. ...+..|.+||+.+++ ...+..+...+
T Consensus 135 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~------------------------~~~l~~~~~~~ 190 (388)
T 3pe7_A 135 DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE------------------------STVILQENQWL 190 (388)
T ss_dssp TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC------------------------EEEEEEESSCE
T ss_pred CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc------------------------eEEeecCCccc
Confidence 7777763 2345789999988742 23334456667
Q ss_pred EEEEEeC---cEEEEeecC------CeEEEecCCCCCCCCCCCcceecccccCCC--CCeEEEEEeecCCcceEEE-EeC
Q 016185 269 DCNRWLG---DFILSKSVD------NEIVLWEPKMKEQSPGEGTADILQKYPVPE--CDIWFIKFSCDFHYNAAAI-GNR 336 (394)
Q Consensus 269 ~~~~~~~---~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~l~~-~~~ 336 (394)
..+.|++ +.++....+ ..|.++|+...+ ...+..+. ..+...+|+|+++ .|+. +..
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~----------~~~l~~~~~~~~~~~~~~spdg~--~l~~~~~~ 258 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN----------MRKVKTHAEGESCTHEFWVPDGS--ALVYVSYL 258 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC----------CEESCCCCTTEEEEEEEECTTSS--CEEEEEEE
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc----------eEEeeeCCCCcccccceECCCCC--EEEEEecC
Confidence 8888864 566665543 378888876553 12222222 2477889999995 4443 332
Q ss_pred CC----cEEEEEecCCCceeeEEeccCCccCC---eeEEEeccCCCEEEEe---------ccCCeEEEEEcCC
Q 016185 337 EG----KIFVWELQSSPPVLIARLSHAQSKSP---IRQTAMSYDGSTILSC---------CEDGAIWRWDAIP 393 (394)
Q Consensus 337 dg----~i~iwd~~~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~s~---------~~dg~i~iwd~~~ 393 (394)
++ .|++||+.+++...+..+. ++... ...++|+|||+.|+.. ..+..|++||+.+
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 259 KGSPDRFIYSADPETLENRQLTSMP--ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp TTCCCEEEEEECTTTCCEEEEEEEC--CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred CCCCcceEEEEecCCCceEEEEcCC--CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 22 3999999988755555544 21100 1224799999988854 4567899999864
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.79 E-value=1.4e-16 Score=137.04 Aligned_cols=276 Identities=11% Similarity=0.000 Sum_probs=178.1
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
..|.+++|+| ++..++..+.++ ++.| .++....+. .+...+..++|. ++|+ +++++..++.|.+
T Consensus 6 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~--~~g~-l~~~~~~~~~i~~ 70 (333)
T 2dg1_A 6 QDLPTLFYSG----KSNSAVPIISESELQTI---TAEPWLEIS-----KKGLQLEGLNFD--RQGQ-LFLLDVFEGNIFK 70 (333)
T ss_dssp CCCCBCCSCG----GGGCSSCCCCGGGSCEE---ECEEEEEEE-----SSCCCEEEEEEC--TTSC-EEEEETTTCEEEE
T ss_pred cccceeeecC----CccceeEEeecccCccc---ccceeEEEe-----ccCccccCcEEC--CCCC-EEEEECCCCEEEE
Confidence 4577888988 566666655555 8888 344444554 334455677777 9998 7888888999999
Q ss_pred EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC----CcEEEEEecCCcE
Q 016185 113 IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD----ESVRLWNVQTGIC 188 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d----~~i~vwd~~~~~~ 188 (394)
||..+++.......+...+.+++++| +++++++... + +.|.+||.++++.
T Consensus 71 ~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~-------------------------~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 71 INPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLG-------------------------DFKSTGGIFAATENGDNL 124 (333)
T ss_dssp ECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECT-------------------------TSSSCCEEEEECTTSCSC
T ss_pred EeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCC-------------------------CCCCCceEEEEeCCCCEE
Confidence 99988776655545667899999999 6677777665 5 6899999887765
Q ss_pred EEEeeccCCCcccEEEEEecCCCCeeEEeecc------CCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee
Q 016185 189 ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM------DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 262 (394)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (394)
...+... .+...+.+++++| +++++++... .+.|..+|....+ +..+.
T Consensus 125 ~~~~~~~-~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~------------------------~~~~~ 178 (333)
T 2dg1_A 125 QDIIEDL-STAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRT------------------------VTPII 178 (333)
T ss_dssp EEEECSS-SSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCC------------------------EEEEE
T ss_pred EEEEccC-ccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCE------------------------EEEee
Confidence 5443311 2446789999999 8887776653 2455556554421 11111
Q ss_pred cCCCceEEEEEe--CcEE-EEeecCCeEEEecCCCC-CCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCC
Q 016185 263 VHSNYVDCNRWL--GDFI-LSKSVDNEIVLWEPKMK-EQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 338 (394)
Q Consensus 263 ~~~~~i~~~~~~--~~~l-~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 338 (394)
.+...+..++|+ ++.+ ++...++.|.+||+.+. ...... .......+..+ ..+..+++++++ .++++...++
T Consensus 179 ~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~-~~~~~~~~~~~-~~~~~i~~d~~G--~l~v~~~~~~ 254 (333)
T 2dg1_A 179 QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF-GATIPYYFTGH-EGPDSCCIDSDD--NLYVAMYGQG 254 (333)
T ss_dssp EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE-EEEEEEECCSS-SEEEEEEEBTTC--CEEEEEETTT
T ss_pred cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccc-cceEEEecCCC-CCCCceEECCCC--CEEEEEcCCC
Confidence 223346778887 5545 45556889999998642 210000 00011112222 356789999998 5666666778
Q ss_pred cEEEEEecCCCceeeEEeccC----CccCCeeEEEeccCCCEEEEeccC
Q 016185 339 KIFVWELQSSPPVLIARLSHA----QSKSPIRQTAMSYDGSTILSCCED 383 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~d 383 (394)
.|.+||.. ++ .+..+... +|...+.+++|+||++.|+.++.+
T Consensus 255 ~v~~~d~~-g~--~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 255 RVLVFNKR-GY--PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEECTT-SC--EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEECCC-CC--EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99999984 32 34444411 122368999999998777766555
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=4.3e-16 Score=133.59 Aligned_cols=244 Identities=10% Similarity=0.015 Sum_probs=175.8
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCC-------------------------cEEEEEcCCCceeEEeeecccCCcccceE
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGN-------------------------RVTVYQCLEGGVIAALQSYVDEDKEESFY 87 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d-------------------------~i~vw~~~~~~~~~~~~~~~~~~~~~~v~ 87 (394)
-+.+.+|+++| +|+++++...+ .|.+||..+++.+..+.. .+-....
T Consensus 23 l~~v~~va~d~----~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~----~~~~~p~ 94 (329)
T 3fvz_A 23 PGQVSGVALDS----KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK----NLFYLPH 94 (329)
T ss_dssp CSCEEEEEECT----TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT----TTCSSEE
T ss_pred cCCceEEEECC----CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC----CccCCce
Confidence 46799999998 78999998877 399999888887654431 2334566
Q ss_pred EEEEEEcCCCCcEEEEeecCCeEEEEECCCCe-eEEEEE---------ecCCceeEEEEcCCCCcEEEEce-eeeEEeec
Q 016185 88 TVSWACNVDGIPFLVAGGINGIIRVIDVSNEK-LHKSFV---------GHGDSINEIRTQPLKPSLVVSAS-KVIIISSL 156 (394)
Q Consensus 88 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~~l~s~~-~~i~~~~~ 156 (394)
.+++. ++|+ ++++...++.|++||..... .+..+. .+......++++|+++.++++.+ .
T Consensus 95 gia~d--~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~------- 164 (329)
T 3fvz_A 95 GLSID--TDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC------- 164 (329)
T ss_dssp EEEEC--TTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-------
T ss_pred EEEEC--CCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-------
Confidence 67776 9999 88888889999999975432 455552 33446889999996677888875 6
Q ss_pred cceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccC-------CCcccEEEEEecCCC-CeeEEeeccCCcEEEEE
Q 016185 157 SLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG-------GHRNEVLSVDFHPSD-IYRIASCGMDNTVKIWS 228 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~-~~~l~s~~~dg~v~iwd 228 (394)
++.|++|| .+++.+..+.... ++......++++| + +.++++...++.|++||
T Consensus 165 ------------------~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~-~~g~l~v~d~~~~~I~~~~ 224 (329)
T 3fvz_A 165 ------------------NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVP-HLDQLCVADRENGRIQCFK 224 (329)
T ss_dssp ------------------CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred ------------------CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEEC-CCCEEEEEECCCCEEEEEE
Confidence 88999999 5677777664210 1234489999999 6 88888888999999999
Q ss_pred ccccceeeccccccCCCCCCCCccccccceeee--ecCCCceEEEEEeC--------cEEEEeecCCeEEEecCCCCCCC
Q 016185 229 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA--SVHSNYVDCNRWLG--------DFILSKSVDNEIVLWEPKMKEQS 298 (394)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~--------~~l~~~~~dg~i~~~d~~~~~~~ 298 (394)
..+++. +..+ ..+...+.++++.+ +..++...+..|++||..+++
T Consensus 225 ~~~G~~-----------------------~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~-- 279 (329)
T 3fvz_A 225 TDTKEF-----------------------VREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE-- 279 (329)
T ss_dssp TTTCCE-----------------------EEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC--
T ss_pred CCCCcE-----------------------EEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe--
Confidence 985332 2222 22344455555553 333333445689999998776
Q ss_pred CCCCcceecccc---cCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 299 PGEGTADILQKY---PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 299 ~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
.+..+ ..+......++++|++ .++++...++.|++|++...
T Consensus 280 -------~~~~~~~~~~~~~~p~~ia~~~dG--~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 280 -------IIDVFKPVRKHFDMPHDIVASEDG--TVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp -------EEEEECCSSSCCSSEEEEEECTTS--EEEEEESSSCCEEEEEEEEC
T ss_pred -------EEEEEcCCCCccCCeeEEEECCCC--CEEEEECCCCEEEEEeCCcc
Confidence 33333 3455678999999999 68888889999999998754
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=9.5e-16 Score=128.82 Aligned_cols=245 Identities=10% Similarity=0.099 Sum_probs=169.1
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecc-cCCcccceEEEEEEEcCCCCcEEEEeec-C
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYV-DEDKEESFYTVSWACNVDGIPFLVAGGI-N 107 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~s~~~-d 107 (394)
+|-..+.+++++| +++++++...++ |.+||.. ++.+..+.... ...+......+++. .+++. ++++... +
T Consensus 27 g~~~~p~~v~~~~----~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~-~~~g~-l~v~~~~~~ 99 (286)
T 1q7f_A 27 GQFTEPSGVAVNA----QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVV-RNSGD-IIVTERSPT 99 (286)
T ss_dssp TCBSCEEEEEECT----TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEE-TTTTE-EEEEECGGG
T ss_pred CccCCCceEEECC----CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEE-cCCCe-EEEEcCCCC
Confidence 4556799999998 688888877666 9999976 65555553211 11233456667663 25665 5555533 8
Q ss_pred CeEEEEECCCCeeEEEEEe-cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 108 GIIRVIDVSNEKLHKSFVG-HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 108 g~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
+.|.+|| .+++.+..+.. +...+.+++++| +++++++... ++.|.+||. .+
T Consensus 100 ~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-------------------------~~~i~~~~~-~g 151 (286)
T 1q7f_A 100 HQIQIYN-QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECK-------------------------VMRVIIFDQ-NG 151 (286)
T ss_dssp CEEEEEC-TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETT-------------------------TTEEEEECT-TS
T ss_pred CEEEEEC-CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECC-------------------------CCEEEEEcC-CC
Confidence 9999999 56777766642 345688999999 6678887776 889999996 46
Q ss_pred cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee--cC
Q 016185 187 ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS--VH 264 (394)
Q Consensus 187 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 264 (394)
+.+..+... .+...+.+++++| +++++++...++.|++||.... .+..+. ++
T Consensus 152 ~~~~~~~~~-~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~------------------------~~~~~~~~g~ 205 (286)
T 1q7f_A 152 NVLHKFGCS-KHLEFPNGVVVND-KQEIFISDNRAHCVKVFNYEGQ------------------------YLRQIGGEGI 205 (286)
T ss_dssp CEEEEEECT-TTCSSEEEEEECS-SSEEEEEEGGGTEEEEEETTCC------------------------EEEEESCTTT
T ss_pred CEEEEeCCC-CccCCcEEEEECC-CCCEEEEECCCCEEEEEcCCCC------------------------EEEEEccCCc
Confidence 666665411 2445689999999 8898888888999999997541 122222 22
Q ss_pred CCceEEEEEe--CcEEEEeecCC-eEEEecCCCCCCCCCCCcceecccccCC--CCCeEEEEEeecCCcceEEEEeCCCc
Q 016185 265 SNYVDCNRWL--GDFILSKSVDN-EIVLWEPKMKEQSPGEGTADILQKYPVP--ECDIWFIKFSCDFHYNAAAIGNREGK 339 (394)
Q Consensus 265 ~~~i~~~~~~--~~~l~~~~~dg-~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~l~~~~~dg~ 339 (394)
...+..++++ |+++++...++ .|.+||.... .+..+..+ ...+..++++|++ .++++ +.++.
T Consensus 206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~----------~~~~~~~~~~~~~~~~i~~~~~g--~l~vs-~~~~~ 272 (286)
T 1q7f_A 206 TNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ----------LISALESKVKHAQCFDVALMDDG--SVVLA-SKDYR 272 (286)
T ss_dssp SCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC----------EEEEEEESSCCSCEEEEEEETTT--EEEEE-ETTTE
T ss_pred cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC----------EEEEEcccCCCCcceeEEECCCC--cEEEE-CCCCe
Confidence 3567888887 67777777776 9999996432 23333222 2347789999998 45555 67999
Q ss_pred EEEEEecCCC
Q 016185 340 IFVWELQSSP 349 (394)
Q Consensus 340 i~iwd~~~~~ 349 (394)
|++|++....
T Consensus 273 v~v~~~~~~~ 282 (286)
T 1q7f_A 273 LYIYRYVQLA 282 (286)
T ss_dssp EEEEECSCCC
T ss_pred EEEEEccccc
Confidence 9999986643
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=1.3e-16 Score=138.07 Aligned_cols=259 Identities=9% Similarity=-0.010 Sum_probs=155.0
Q ss_pred cceeeeeccCc-cceeEEEEEeeCCCcceE-EEEecCCc-EEEEEcCCCceeEEeeeccc-CCcccceEEEEEEEcCCCC
Q 016185 23 YRVTNKLQEGK-RPLYAVVFNFIDSRYFNV-FATVGGNR-VTVYQCLEGGVIAALQSYVD-EDKEESFYTVSWACNVDGI 98 (394)
Q Consensus 23 ~~~~~~~~~h~-~~v~~i~~sp~~~~~~~~-las~~~d~-i~vw~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~ 98 (394)
.+....+..+. ..+..++|+| ++++ +++...++ |.+||+.+++.+..+..... ......+..++|+ |+|+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~s~----dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~s--pdg~ 104 (349)
T 1jmx_B 31 DTVYKSCVMPDKFGPGTAMMAP----DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAIS--PDGK 104 (349)
T ss_dssp TEEEEEEECSSCCSSCEEEECT----TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEEC--TTSS
T ss_pred CcEEEEEecCCCCCCceeEECC----CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEEC--CCCC
Confidence 34445554332 2578999999 6764 45555555 99999999887766652110 0002335667777 9999
Q ss_pred cEEEEeecC------------CeEEEEECCCCee---EEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeee
Q 016185 99 PFLVAGGIN------------GIIRVIDVSNEKL---HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLL 163 (394)
Q Consensus 99 ~~l~s~~~d------------g~i~vwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~ 163 (394)
+|++++.+ +.|.+||+.+++. +..+. +...+.+++|+| ++.+ +.++.
T Consensus 105 -~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~-dg~l-~~~~~-------------- 166 (349)
T 1jmx_B 105 -EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD-DGSL-YVAGP-------------- 166 (349)
T ss_dssp -EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT-TSCE-EEESS--------------
T ss_pred -EEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC-CCcE-EEccC--------------
Confidence 88887765 8999999988543 34444 344688999999 5564 44443
Q ss_pred eeccceeeeccCCcEEEEEecCCcEEEEeeccCC-Cc--------------------ccEEEEEecCCCCeeEEee-ccC
Q 016185 164 FIRSNCLRVGQDESVRLWNVQTGICILIFAGAGG-HR--------------------NEVLSVDFHPSDIYRIASC-GMD 221 (394)
Q Consensus 164 ~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~~--------------------~~i~~~~~~~~~~~~l~s~-~~d 221 (394)
.|.+||+.+++....+..... .. .....+++.+ ++...... ...
T Consensus 167 -------------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~ 232 (349)
T 1jmx_B 167 -------------DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFK-DDKQDPATADLL 232 (349)
T ss_dssp -------------SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------CCCEEE
T ss_pred -------------cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecC-CCcCCccccccc
Confidence 499999999888777652100 00 0344566665 33111100 011
Q ss_pred CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCC
Q 016185 222 NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQS 298 (394)
Q Consensus 222 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~ 298 (394)
..+..+|..+++. .......+...+.++.++ +++++++ ++.|.+||+.+++
T Consensus 233 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~-- 286 (349)
T 1jmx_B 233 YGYLSVDLKTGKT----------------------HTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK-- 286 (349)
T ss_dssp EEEEEEETTTCCE----------------------EEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE--
T ss_pred eeEEEEeccCCcE----------------------EecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe--
Confidence 1112233333210 011112234455666664 5677776 8999999998765
Q ss_pred CCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec
Q 016185 299 PGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS 357 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 357 (394)
.+..+... ..+..++|+|++ .+|++++.++.|++||+.+++ .+..++
T Consensus 287 -------~~~~~~~~-~~~~~~~~s~dg--~~l~~~~~~~~v~v~d~~~~~--~~~~~~ 333 (349)
T 1jmx_B 287 -------LIKAANLD-HTYYCVAFDKKG--DKLYLGGTFNDLAVFNPDTLE--KVKNIK 333 (349)
T ss_dssp -------EEEEEECS-SCCCEEEECSSS--SCEEEESBSSEEEEEETTTTE--EEEEEE
T ss_pred -------EEEEEcCC-CCccceEECCCC--CEEEEecCCCeEEEEeccccc--eeeeee
Confidence 33333322 346789999998 467778889999999998874 455554
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=2.3e-16 Score=148.60 Aligned_cols=250 Identities=8% Similarity=-0.034 Sum_probs=155.9
Q ss_pred eeeccCcccee---------EEEEE--eeCCCcceE-EEEecCCc--EEEEEcC--CCceeEEeeecccCCcccceEEEE
Q 016185 27 NKLQEGKRPLY---------AVVFN--FIDSRYFNV-FATVGGNR--VTVYQCL--EGGVIAALQSYVDEDKEESFYTVS 90 (394)
Q Consensus 27 ~~~~~h~~~v~---------~i~~s--p~~~~~~~~-las~~~d~--i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~ 90 (394)
+.+..|...+. ..+|+ | ||+. |+.++... |.++++. .......+.......+...+..++
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SP----Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~ 136 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRP----AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPV 136 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCS----SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEE
T ss_pred ceeCCCCccccccccccCCccceeeeec----CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcE
Confidence 34555666666 66676 7 6777 77666533 6667654 203334444221111456677788
Q ss_pred EEEcCCCCcEEEEeecC----------CeEEEEECCC------CeeEEEEE-ecCCceeEEEEcCCCCcEEEEceeeeEE
Q 016185 91 WACNVDGIPFLVAGGIN----------GIIRVIDVSN------EKLHKSFV-GHGDSINEIRTQPLKPSLVVSASKVIII 153 (394)
Q Consensus 91 ~~~~~~~~~~l~s~~~d----------g~i~vwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~~i~~ 153 (394)
|+ |||+ .|++++.+ ..|++||+.+ ++. ..+. .+...+..++|+| +++.|+..+.
T Consensus 137 ~s--pDg~-~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~Sp-DG~~la~~~~---- 207 (662)
T 3azo_A 137 LL--PERG-EVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSP-DGRQAVWLAW---- 207 (662)
T ss_dssp EE--TTTT-EEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECT-TSSEEEEEEE----
T ss_pred EC--CCCC-EEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECC-CCCEEEEEEC----
Confidence 88 9999 88888776 5899999987 544 4444 5567788899999 7777776664
Q ss_pred eeccceeeeeeeccceeeeccC--------CcEEEEEec-CC---cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC
Q 016185 154 SSLSLICLLLFIRSNCLRVGQD--------ESVRLWNVQ-TG---ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD 221 (394)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~d--------~~i~vwd~~-~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d 221 (394)
+ ..|.+||+. ++ +...... ++...+..+.|+| ++++++++..+
T Consensus 208 ---------------------~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~---~~~~~~~~~~~sp-dg~l~~~~~~~ 262 (662)
T 3azo_A 208 ---------------------DHPRMPWEGTELKTARVTEDGRFADTRTLLG---GPEEAIAQAEWAP-DGSLIVATDRT 262 (662)
T ss_dssp ---------------------CTTCCTTTCEEEEEEEECTTSCEEEEEEEEE---ETTBCEEEEEECT-TSCEEEEECTT
T ss_pred ---------------------CCCCCCCCCcEEEEEEECCCCcccccEEeCC---CCCceEcceEECC-CCeEEEEECCC
Confidence 4 479999998 56 3433333 4578899999999 88888888888
Q ss_pred C--cEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCC--------ceEEEEEe--CcEEEEeecCCeEEE
Q 016185 222 N--TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN--------YVDCNRWL--GDFILSKSVDNEIVL 289 (394)
Q Consensus 222 g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~i~~~~~~--~~~l~~~~~dg~i~~ 289 (394)
+ .|.+||+.+++.. .....+.. .+..++|+ +++++++.. +.++|
T Consensus 263 ~~~~l~~~~~~~~~~~-----------------------~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l 318 (662)
T 3azo_A 263 GWWNLHRVDPATGAAT-----------------------QLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVL 318 (662)
T ss_dssp SSCEEEEECTTTCCEE-----------------------ESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEE
T ss_pred CCeEEEEEECCCCcee-----------------------ecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEE
Confidence 8 5555555442210 00011111 13456665 678888887 99999
Q ss_pred e--cCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEE--EEecCCC
Q 016185 290 W--EPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFV--WELQSSP 349 (394)
Q Consensus 290 ~--d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~i--wd~~~~~ 349 (394)
| |+.++ .+..+..+...+..+. ++++...++++++.+....+ +|+.+++
T Consensus 319 ~~~d~~~~----------~~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 319 GILDPESG----------ELVDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEETTTT----------EEEECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEECCCC----------cEEEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 9 54443 2345555555666551 55664344555555554444 4555554
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.75 E-value=3.4e-15 Score=129.10 Aligned_cols=261 Identities=10% Similarity=-0.010 Sum_probs=154.9
Q ss_pred EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC---C--eEEEEECCCCeeEEEEEecCCceeEE
Q 016185 60 VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN---G--IIRVIDVSNEKLHKSFVGHGDSINEI 134 (394)
Q Consensus 60 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d---g--~i~vwd~~~~~~~~~~~~~~~~v~~~ 134 (394)
|.+||+.+++.. .+ ..+...+|+ |||+ .|+..+.+ + .|.+|++.+++.......+ . +..+
T Consensus 45 l~~~d~~~~~~~-~l---------~~~~~~~~S--pDg~-~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~ 109 (347)
T 2gop_A 45 IVIENLKNNARR-FI---------ENATMPRIS--PDGK-KIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSL 109 (347)
T ss_dssp EEEEETTTCCEE-EE---------ESCEEEEEC--TTSS-EEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEE
T ss_pred EEEEeCCCCceE-Ec---------ccCCCeEEC--CCCC-EEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccce
Confidence 999998877642 22 245567777 9999 77766543 3 4888888887765555443 4 9999
Q ss_pred EEcCCCCcEEEEceeeeE-Eeeccce-eeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCC
Q 016185 135 RTQPLKPSLVVSASKVII-ISSLSLI-CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI 212 (394)
Q Consensus 135 ~~~~~~~~~l~s~~~~i~-~~~~~~~-~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 212 (394)
+|+| +++.|+.++..-. -...... ...+..++.-+.......|.+||+.+++.+..+. . . .+..+.|+| ++
T Consensus 110 ~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~---~-~-~~~~~~~sp-dg 182 (347)
T 2gop_A 110 EWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE---K-P-RFSSGIWHR-DK 182 (347)
T ss_dssp EECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEE---E-E-TTCEEEEET-TE
T ss_pred eECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec---C-C-CcccccCCC-Ce
Confidence 9999 6666666553000 0000000 0000000000011123579999998887755665 2 3 788999999 88
Q ss_pred eeEEeeccCC-------cEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecC-
Q 016185 213 YRIASCGMDN-------TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVD- 284 (394)
Q Consensus 213 ~~l~s~~~dg-------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d- 284 (394)
+++++..++ ...+|.+.+++ ...+..+ ..+..+..+|+.++.++.+
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d~~~------------------------~~~l~~~-~~~~~~spdg~~l~~~~~~~ 236 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWEDGK------------------------EEKMFEK-VSFYAVDSDGERILLYGKPE 236 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEETTE------------------------EEEEEEE-ESEEEEEECSSCEEEEECCS
T ss_pred -EEEEEecccccccccccccEEEeCCCc------------------------eEEeccC-cceeeECCCCCEEEEEEccc
Confidence 777775542 34455443311 1112222 3444454458877766643
Q ss_pred -------CeEEEecCCCCCCCCCCCcceecccccCCCCCeEE-EEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEe
Q 016185 285 -------NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF-IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARL 356 (394)
Q Consensus 285 -------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 356 (394)
..|.+|| +++ .......+...+.. +.|+ ++ ++++++.++.+++| +.+++ . ..+
T Consensus 237 ~~~~~~~~~l~~~d--~~~---------~~~l~~~~~~~~~~~~~~s-dg---~~~~~~~~~~~~l~-~~~g~--~-~~~ 297 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKE---------VMGILDEVDRGVGQAKIKD-GK---VYFTLFEEGSVNLY-IWDGE--I-KPI 297 (347)
T ss_dssp SSCCCSSCEEEEEC--SSC---------EEESSTTCCSEEEEEEEET-TE---EEEEEEETTEEEEE-EESSS--E-EEE
T ss_pred cCCccccceEEEEC--CCc---------eEeccccCCcccCCccEEc-Cc---EEEEEecCCcEEEE-EcCCc--e-EEE
Confidence 4688888 332 22222344556775 8888 65 78888999999999 88543 2 333
Q ss_pred ccCCccCCeeEEEeccCCCEEEEeccCCeE-EEEEc
Q 016185 357 SHAQSKSPIRQTAMSYDGSTILSCCEDGAI-WRWDA 391 (394)
Q Consensus 357 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i-~iwd~ 391 (394)
. .+...|.+++|+| .++++++.++.. .||.+
T Consensus 298 ~--~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 298 A--KGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp E--CSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred e--cCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 3 3357899999999 677777766654 66654
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=4.6e-14 Score=119.18 Aligned_cols=281 Identities=10% Similarity=-0.017 Sum_probs=187.2
Q ss_pred eccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC
Q 016185 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN 107 (394)
Q Consensus 29 ~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d 107 (394)
+..+...+.++++.| +|+++++...++ |.+||.. ++. ..+.. +.....+..+++. ++|. +.++...+
T Consensus 10 ~~~~~~~~~~i~~d~----~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~---~~~~~~~~~i~~~--~~g~-l~v~~~~~ 77 (299)
T 2z2n_A 10 LTNQDTGPYGITVSD----KGKVWITQHKANMISCINLD-GKI-TEYPL---PTPDAKVMCLTIS--SDGE-VWFTENAA 77 (299)
T ss_dssp CCSSSCCEEEEEECT----TSCEEEEETTTTEEEEECTT-CCE-EEEEC---SSTTCCEEEEEEC--TTSC-EEEEETTT
T ss_pred CCCcCCCccceEECC----CCCEEEEecCCCcEEEEcCC-CCe-EEecC---CcccCceeeEEEC--CCCC-EEEeCCCC
Confidence 344567899999998 788888877554 9999977 543 33221 1234566677766 8898 77776668
Q ss_pred CeEEEEECCCCeeEEEEE--ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC
Q 016185 108 GIIRVIDVSNEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT 185 (394)
Q Consensus 108 g~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~ 185 (394)
+.|..||.. ++. ..+. .....+..+++.+ ++.++++... ++.|.+||. +
T Consensus 78 ~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-------------------------~~~i~~~d~-~ 128 (299)
T 2z2n_A 78 NKIGRITKK-GII-KEYTLPNPDSAPYGITEGP-NGDIWFTEMN-------------------------GNRIGRITD-D 128 (299)
T ss_dssp TEEEEECTT-SCE-EEEECSSTTCCEEEEEECT-TSCEEEEETT-------------------------TTEEEEECT-T
T ss_pred CeEEEECCC-CcE-EEEeCCCcCCCceeeEECC-CCCEEEEecC-------------------------CceEEEECC-C
Confidence 899999976 432 3333 2445788999998 6677777666 788999998 5
Q ss_pred CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCC
Q 016185 186 GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 265 (394)
Q Consensus 186 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (394)
++...... ......+.++++++ ++.++++...++.|..||. +++.. ......+.
T Consensus 129 g~~~~~~~--~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~----------------------~~~~~~~~ 182 (299)
T 2z2n_A 129 GKIREYEL--PNKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDIT----------------------EFKIPTPA 182 (299)
T ss_dssp CCEEEEEC--SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEE----------------------EEECSSTT
T ss_pred CCEEEecC--CCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEE----------------------EeeCCCCC
Confidence 55443222 12456789999999 8887777777889999998 42210 01112234
Q ss_pred CceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEE
Q 016185 266 NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVW 343 (394)
Q Consensus 266 ~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iw 343 (394)
..+.+++++ +++.++...++.|.+||. +++. ...........+..+++++++ .++++...++.|..|
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~ 251 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI--------TEFKIPTPNARPHAITAGAGI--DLWFTEWGANKIGRL 251 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCEEEEEECSTT--CEEEEETTTTEEEEE
T ss_pred CcceeEEECCCCCEEEEccCCceEEEECC-CCcE--------EEEECCCCCCCceeEEECCCC--CEEEeccCCceEEEE
Confidence 456778886 666666666889999998 5431 111122344568899999998 455555577899999
Q ss_pred EecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 344 ELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 344 d~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
|. +++ +..+....+...+.++++ +++.++++.+ .+.|..++..+
T Consensus 252 d~-~g~---~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 252 TS-NNI---IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp ET-TTE---EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred CC-CCc---eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 98 332 233322244567899999 8888877765 56777777653
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=5.1e-15 Score=126.74 Aligned_cols=262 Identities=10% Similarity=-0.028 Sum_probs=171.5
Q ss_pred cEEEEEcCCCceeEEeeec-ccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEc
Q 016185 59 RVTVYQCLEGGVIAALQSY-VDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQ 137 (394)
Q Consensus 59 ~i~vw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 137 (394)
.|.++|..+++....+... ...........+.+. +++ +.++...++.|.+||..+++.+.++. .......++++
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~---~~~-lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR---DGI-GWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE---TTE-EEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE---CCE-EEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 3999999988765544210 011122334455543 344 66666678999999999999988886 34567899998
Q ss_pred CCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccC--CCcccEEEEEecCCCCeeE
Q 016185 138 PLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG--GHRNEVLSVDFHPSDIYRI 215 (394)
Q Consensus 138 ~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l 215 (394)
+ ++.++++... ++.|.+||..+++....+.... +.......+++ . ++.++
T Consensus 93 ~-~g~lyv~~~~-------------------------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~ly 144 (328)
T 3dsm_A 93 S-DEKAYVTQIW-------------------------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVY 144 (328)
T ss_dssp E-TTEEEEEEBS-------------------------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEE
T ss_pred C-CCeEEEEECC-------------------------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEE
Confidence 8 5566666546 8999999999998887776211 01114556777 3 66766
Q ss_pred Eeec-cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecC--------
Q 016185 216 ASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD-------- 284 (394)
Q Consensus 216 ~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d-------- 284 (394)
++.. .++.|.++|+.+++. +..+.. ......+.++ |++++++..+
T Consensus 145 v~~~~~~~~v~viD~~t~~~-----------------------~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 145 VNCWSYQNRILKIDTETDKV-----------------------VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp EEECTTCCEEEEEETTTTEE-----------------------EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred EEcCCCCCEEEEEECCCCeE-----------------------EEEEEc-CCCccceEEcCCCCEEEEECCCccCCcccc
Confidence 6654 489999999998442 222222 1223455665 6666666554
Q ss_pred --CeEEEecCCCCCCCCCCCcceecccccCC-CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCc
Q 016185 285 --NEIVLWEPKMKEQSPGEGTADILQKYPVP-ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQS 361 (394)
Q Consensus 285 --g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 361 (394)
+.|.++|..+.+ ....+... ......++++|++ ..++++.. .|.+||..+++......+. ..
T Consensus 201 ~~~~v~~id~~t~~---------v~~~~~~~~g~~p~~la~~~d~--~~lyv~~~--~v~~~d~~t~~~~~~~~~~--~~ 265 (328)
T 3dsm_A 201 EAPSLYRIDAETFT---------VEKQFKFKLGDWPSEVQLNGTR--DTLYWINN--DIWRMPVEADRVPVRPFLE--FR 265 (328)
T ss_dssp CCCEEEEEETTTTE---------EEEEEECCTTCCCEEEEECTTS--CEEEEESS--SEEEEETTCSSCCSSCSBC--CC
T ss_pred CCceEEEEECCCCe---------EEEEEecCCCCCceeEEEecCC--CEEEEEcc--EEEEEECCCCceeeeeeec--CC
Confidence 789999998765 33333322 2357899999988 45666554 8999999877531111111 12
Q ss_pred cCCeeEEEecc-CCCEEEEe----ccCCeEEEEEcC
Q 016185 362 KSPIRQTAMSY-DGSTILSC----CEDGAIWRWDAI 392 (394)
Q Consensus 362 ~~~v~~~~~s~-~~~~l~s~----~~dg~i~iwd~~ 392 (394)
...+..++++| ++.++++. ..++.|.+||..
T Consensus 266 ~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 266 DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 45788999999 55666665 578899999875
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=1.4e-16 Score=140.33 Aligned_cols=257 Identities=11% Similarity=-0.017 Sum_probs=159.9
Q ss_pred EEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec-C--CeEEEEECCCCeeEEEEEecCCceeEEEEc
Q 016185 61 TVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI-N--GIIRVIDVSNEKLHKSFVGHGDSINEIRTQ 137 (394)
Q Consensus 61 ~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~-d--g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 137 (394)
...|..+++.+..+.......+...+..++|+ |+|+ +|+.... + ..|.+||+.+++......++......+.|+
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~S--pdG~-~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~s 89 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFT--QDGK-KLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIS 89 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBC--TTSC-EEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEEC
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCC--CCCC-EEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceEC
Confidence 44567777766666532211122224556666 9999 6655533 2 478889988877544333333223347899
Q ss_pred CCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEE-------------
Q 016185 138 PLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLS------------- 204 (394)
Q Consensus 138 ~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~------------- 204 (394)
| +++.|+..+. ++.|.+||+.+++...... .+......
T Consensus 90 p-dg~~l~~~~~-------------------------~~~l~~~d~~~~~~~~~~~---~~~~~~~~g~~l~~~~~~~~~ 140 (396)
T 3c5m_A 90 T-DERAFFYVKN-------------------------ELNLMKVDLETLEEQVIYT---VDEEWKGYGTWVANSDCTKLV 140 (396)
T ss_dssp T-TSSEEEEEET-------------------------TTEEEEEETTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEE
T ss_pred C-CCCEEEEEEc-------------------------CCcEEEEECCCCCcEEEEe---cccccCCCCCEEEeccCCccc
Confidence 9 7788888777 8899999998887665554 23332222
Q ss_pred ------EEecCCCCeeEEee-----ccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEE
Q 016185 205 ------VDFHPSDIYRIASC-----GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW 273 (394)
Q Consensus 205 ------~~~~~~~~~~l~s~-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 273 (394)
+.|+| +++.++.. ..+..|.+||+.+++ ...+..+...+..+.|
T Consensus 141 ~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~------------------------~~~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 141 GIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGE------------------------LEVIHQDTAWLGHPIY 195 (396)
T ss_dssp EEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCC------------------------EEEEEEESSCEEEEEE
T ss_pred cccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCc------------------------EEeeccCCcccccceE
Confidence 35667 66655544 356789999987732 1222245666778888
Q ss_pred eC---cEEEEeecC------CeEEEecCCCCCCCCCCCcceecccccCC--CCCeEEEEEeecCCcceEEEEeCC-----
Q 016185 274 LG---DFILSKSVD------NEIVLWEPKMKEQSPGEGTADILQKYPVP--ECDIWFIKFSCDFHYNAAAIGNRE----- 337 (394)
Q Consensus 274 ~~---~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~l~~~~~d----- 337 (394)
++ +.++..+.+ ..|.+||+...+. ..+..+ ...+..++|+|+++ .|+.++.+
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~----------~~l~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~ 263 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV----------RKIKEHAEGESCTHEFWIPDGS--AMAYVSYFKGQTD 263 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC----------EESSCCCTTEEEEEEEECTTSS--CEEEEEEETTTCC
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCce----------eEeeccCCCccccceEECCCCC--EEEEEecCCCCcc
Confidence 64 445554433 4688888865531 111112 23577889999994 55555433
Q ss_pred CcEEEEEecCCCceeeEEeccCCccCCeeEEEecc-CCCEEEEec----------------cCCeEEEEEcCC
Q 016185 338 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY-DGSTILSCC----------------EDGAIWRWDAIP 393 (394)
Q Consensus 338 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~----------------~dg~i~iwd~~~ 393 (394)
+.|++||+.+++...+..+. + .. +.|+| ||++|++++ .++.|++||+.+
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~--~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMP--P----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp EEEEEECTTTCCEEEEEECC--S----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred ceEEEEECCCCCeEEeeeCC--C----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 44999999887543333332 2 22 88999 999888754 347899999864
No 180
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=3.6e-15 Score=142.05 Aligned_cols=324 Identities=11% Similarity=0.003 Sum_probs=183.6
Q ss_pred eeeeccCccc-----eeEEEEEeeCCCcceEEEEecCC---------c-EEEEEcCCCceeEEeeecccCCcccceEEEE
Q 016185 26 TNKLQEGKRP-----LYAVVFNFIDSRYFNVFATVGGN---------R-VTVYQCLEGGVIAALQSYVDEDKEESFYTVS 90 (394)
Q Consensus 26 ~~~~~~h~~~-----v~~i~~sp~~~~~~~~las~~~d---------~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~ 90 (394)
...+.+|... ...++||| ||++|+.++.+ + +.+||+.+++.. .+. .+...+...+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~Sp----dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~-----~~~~~~~~~~ 118 (740)
T 4a5s_A 49 SVFLENSTFDEFGHSINDYSISP----DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEE-----RIPNNTQWVT 118 (740)
T ss_dssp EEEECTTTTTTCCSCCCEEEECT----TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSS-----CCCTTEEEEE
T ss_pred EEEEechhhhhhcccccceEECC----CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-Ecc-----cCCCcceeeE
Confidence 4445666533 34478899 79999988874 3 679999988753 233 3456788888
Q ss_pred EEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEE-EecCCce-----------------eEEEEcCCCCcEEEEcee---
Q 016185 91 WACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF-VGHGDSI-----------------NEIRTQPLKPSLVVSASK--- 149 (394)
Q Consensus 91 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~l~s~~~--- 149 (394)
|+ |||+ .||.+ .++.|++|++.+++..+.. .++...+ ..+.|+| +++.|+..+.
T Consensus 119 ~S--PdG~-~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~ 193 (740)
T 4a5s_A 119 WS--PVGH-KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDT 193 (740)
T ss_dssp EC--SSTT-CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECT
T ss_pred EC--CCCC-EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEccc
Confidence 87 9999 77777 4789999999887654321 1222222 3489999 7787777654
Q ss_pred eeEEeeccceeee--eeecc----ceeeecc--CCcEEEEEecC---Cc--EEEEeecc---CCCcccEEEEEecCCCCe
Q 016185 150 VIIISSLSLICLL--LFIRS----NCLRVGQ--DESVRLWNVQT---GI--CILIFAGA---GGHRNEVLSVDFHPSDIY 213 (394)
Q Consensus 150 ~i~~~~~~~~~~~--~~~~~----~~~~~~~--d~~i~vwd~~~---~~--~~~~~~~~---~~~~~~i~~~~~~~~~~~ 213 (394)
.+..|.+...... ..+.. .-..|.. ...|++||+.+ ++ ....+... .++...+..++|+| |++
T Consensus 194 ~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~ 272 (740)
T 4a5s_A 194 EVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QER 272 (740)
T ss_dssp TCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTE
T ss_pred CCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCe
Confidence 2444433111000 00000 0011222 23688999988 73 22333310 02778899999999 888
Q ss_pred eEEeec----cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceE-----EEEEe--CcEEE-Ee
Q 016185 214 RIASCG----MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD-----CNRWL--GDFIL-SK 281 (394)
Q Consensus 214 ~l~s~~----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~~--~~~l~-~~ 281 (394)
.++... .+..|++||+.+++..... .......-..|...+. ...|+ |+.++ ..
T Consensus 273 ~~~~~~~r~~~~~~i~~~d~~tg~~~~~~---------------~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~ 337 (740)
T 4a5s_A 273 ISLQWLRRIQNYSVMDICDYDESSGRWNC---------------LVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII 337 (740)
T ss_dssp EEEEEEESSTTEEEEEEEEEETTTTEEEE---------------CGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEE
T ss_pred EEEEEeCCCCCEEEEEEEECCCCccccce---------------eEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEE
Confidence 666543 3457999999885400000 0000111133444443 56676 66655 44
Q ss_pred e-cC--CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeC----CCcEEEEEecCCCceeeE
Q 016185 282 S-VD--NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR----EGKIFVWELQSSPPVLIA 354 (394)
Q Consensus 282 ~-~d--g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~ 354 (394)
+ .+ ..|.+||+.+++ ...+......+..+. .++++ .++++++. .+...||.+.........
T Consensus 338 s~~~G~~~l~~~~~~~~~----------~~~lT~g~~~v~~~~-~~d~~-~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~ 405 (740)
T 4a5s_A 338 SNEEGYRHICYFQIDKKD----------CTFITKGTWEVIGIE-ALTSD-YLYYISNEYKGMPGGRNLYKIQLIDYTKVT 405 (740)
T ss_dssp ECTTSCEEEEEEETTCSS----------CEESCCSSSCEEEEE-EECSS-EEEEEESCGGGCTTCBEEEEEETTEEEEEE
T ss_pred EcCCCceEEEEEECCCCc----------eEecccCCEEEEEEE-EEeCC-EEEEEEecCCCCCceeEEEEEECCCCCcce
Confidence 4 33 468888887664 223333344455543 35553 45555554 344566655543222222
Q ss_pred Eecc--CCccCCeeEEEeccCCCEEEEeccC---CeEEEEEcC
Q 016185 355 RLSH--AQSKSPIRQTAMSYDGSTILSCCED---GAIWRWDAI 392 (394)
Q Consensus 355 ~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~ 392 (394)
.+.. .+....+....|+|++++++..... ..+.+++..
T Consensus 406 ~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~ 448 (740)
T 4a5s_A 406 CLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSV 448 (740)
T ss_dssp ESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETT
T ss_pred eeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECC
Confidence 3331 1234568889999999987644322 356676654
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=1e-14 Score=123.11 Aligned_cols=236 Identities=10% Similarity=-0.023 Sum_probs=158.1
Q ss_pred cceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeee
Q 016185 84 ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLL 163 (394)
Q Consensus 84 ~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~ 163 (394)
.....++|. |+|+.+++++..++.|..||..++ ...+..+...+.+++++| ++.++++...
T Consensus 28 ~~~eg~~~d--~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~-------------- 88 (296)
T 3e5z_A 28 TWTEGPVYV--PARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHG-------------- 88 (296)
T ss_dssp SSEEEEEEE--GGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETT--------------
T ss_pred ccccCCeEe--CCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecC--------------
Confidence 344567887 888757788888999999998876 667777778899999999 6778777766
Q ss_pred eeccceeeeccCCcEEEEEecCCcEEEEeeccCC-CcccEEEEEecCCCCeeEEe----ecc-------------CCcEE
Q 016185 164 FIRSNCLRVGQDESVRLWNVQTGICILIFAGAGG-HRNEVLSVDFHPSDIYRIAS----CGM-------------DNTVK 225 (394)
Q Consensus 164 ~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s----~~~-------------dg~v~ 225 (394)
++.|.+||..+++.......... ....+..++++| +++++++ |+. .+.|.
T Consensus 89 -----------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~ 156 (296)
T 3e5z_A 89 -----------LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVF 156 (296)
T ss_dssp -----------TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred -----------CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEE
Confidence 78999999988876544321111 123467899999 8888887 331 23444
Q ss_pred EEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCC-CCCCCCCCC
Q 016185 226 IWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPK-MKEQSPGEG 302 (394)
Q Consensus 226 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~-~~~~~~~~~ 302 (394)
.++... .+..+..+......++|+ ++.+++.+.++.|.+||+. .++..
T Consensus 157 ~~~~~g-------------------------~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~---- 207 (296)
T 3e5z_A 157 RLAPDG-------------------------TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE---- 207 (296)
T ss_dssp EECTTS-------------------------CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE----
T ss_pred EECCCC-------------------------CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc----
Confidence 444431 122334455566788887 6677777788999999987 22200
Q ss_pred cceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEe-ccCCCEEEEec
Q 016185 303 TADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAM-SYDGSTILSCC 381 (394)
Q Consensus 303 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~s~~ 381 (394)
.....+..+...+..+++++++ +++++. ++.|.+||.. + ..+..+. .+.. +++++| +|+++.|++++
T Consensus 208 --~~~~~~~~~~~~p~~i~~d~~G--~l~v~~--~~~v~~~~~~-g--~~~~~~~--~~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 208 --YQGVHFTVEPGKTDGLRVDAGG--LIWASA--GDGVHVLTPD-G--DELGRVL--TPQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp --EEEEEECCSSSCCCSEEEBTTS--CEEEEE--TTEEEEECTT-S--CEEEEEE--CSSC-CCEEEEESTTSCEEEEEE
T ss_pred --CCCeEeeCCCCCCCeEEECCCC--CEEEEc--CCeEEEECCC-C--CEEEEEE--CCCC-ceeEEEECCCCCEEEEEc
Confidence 0011112233445678999999 444444 7889999986 3 2455555 4445 899999 68999898888
Q ss_pred cCCeEEEEEcC
Q 016185 382 EDGAIWRWDAI 392 (394)
Q Consensus 382 ~dg~i~iwd~~ 392 (394)
.++ +.-++..
T Consensus 276 ~~~-l~~~~~~ 285 (296)
T 3e5z_A 276 STE-FWSIETN 285 (296)
T ss_dssp TTE-EEEEECS
T ss_pred CCe-EEEEEcc
Confidence 764 4444443
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=1.4e-13 Score=125.49 Aligned_cols=278 Identities=9% Similarity=0.003 Sum_probs=186.4
Q ss_pred cceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECC--CCeeEEEE
Q 016185 48 YFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVS--NEKLHKSF 124 (394)
Q Consensus 48 ~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~ 124 (394)
.+.++++...++ |.++|..+++.+..+.. ......+.++ |||+ ++++++.|+.|.+||+. +++.+.++
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~------g~~p~~v~~S--pDGr-~lyv~~~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT------GYAVHISRLS--ASGR-YLFVIGRDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC------SSCEEEEEEC--TTSC-EEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC------CCCccceEEC--CCCC-EEEEEcCCCeEEEEECCCCCCcEeEEE
Confidence 356677776666 99999999998888762 2234456665 9999 88889999999999995 77888888
Q ss_pred EecCCceeEEEEc----CCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCC---
Q 016185 125 VGHGDSINEIRTQ----PLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGG--- 197 (394)
Q Consensus 125 ~~~~~~v~~~~~~----~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~--- 197 (394)
.... ....++|+ |++..++++... +++|.++|..+.+.+..+.....
T Consensus 237 ~~G~-~P~~ia~s~~~~pDGk~l~v~n~~-------------------------~~~v~ViD~~t~~~~~~i~~~~~~~~ 290 (567)
T 1qks_A 237 KIGS-EARSIETSKMEGWEDKYAIAGAYW-------------------------PPQYVIMDGETLEPKKIQSTRGMTYD 290 (567)
T ss_dssp ECCS-EEEEEEECCSTTCTTTEEEEEEEE-------------------------TTEEEEEETTTCCEEEEEECCEECTT
T ss_pred ecCC-CCceeEEccccCCCCCEEEEEEcc-------------------------CCeEEEEECCCCcEEEEEeccccccc
Confidence 7543 45789999 644344445555 79999999999998887763110
Q ss_pred ----C-cccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEE
Q 016185 198 ----H-RNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNR 272 (394)
Q Consensus 198 ----~-~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 272 (394)
| ...+..+..++....+++....+|.|.++|....+. ..+..+ ........+.
T Consensus 291 ~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~---------------------~~v~~i-~~~~~~~d~~ 348 (567)
T 1qks_A 291 EQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN---------------------LKTTEI-SAERFLHDGG 348 (567)
T ss_dssp TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE---------------------EEEEEE-ECCSSEEEEE
T ss_pred cccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc---------------------ceeeee-eccccccCce
Confidence 1 126778888884466677777789999999887321 011122 2234466777
Q ss_pred Ee--CcEEEEee-cCCeEEEecCCCCCCCCCCCcceeccc--ccCCC-CCeEEEEEeecCCcceEEEEe-CCCcEEEEEe
Q 016185 273 WL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADILQK--YPVPE-CDIWFIKFSCDFHYNAAAIGN-REGKIFVWEL 345 (394)
Q Consensus 273 ~~--~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~-~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~ 345 (394)
|+ +++++++. .++.|.++|+.+++.. ..+.. ...|. ..+. -++|++. ..++++. .++.|.++|.
T Consensus 349 ~~pdgr~~~va~~~sn~V~ViD~~t~kl~------~~i~vgg~~Phpg~g~~--~~~p~~g-~v~~t~~~g~~~Vsvid~ 419 (567)
T 1qks_A 349 LDGSHRYFITAANARNKLVVIDTKEGKLV------AIEDTGGQTPHPGRGAN--FVHPTFG-PVWATSHMGDDSVALIGT 419 (567)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEETTTTEEE------EEEECSSSSBCCTTCEE--EEETTTE-EEEEEEBSSSSEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcEE------EEEeccCcCCCCcccee--eECCCCC-cEEEeCCCCCCeEEEecC
Confidence 86 67766554 6889999999987521 11111 11222 1222 2577753 3455543 5689999999
Q ss_pred cCCC-----ceeeEEeccCCccCCeeEEEeccCCCEEEEecc-------CCeEEEEEcCC
Q 016185 346 QSSP-----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE-------DGAIWRWDAIP 393 (394)
Q Consensus 346 ~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-------dg~i~iwd~~~ 393 (394)
.+.. .+.+.++... ...-..+..+|++++|.+... ..+|.|+|+.+
T Consensus 420 ~~~~~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 420 DPEGHPDNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp CTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred CCCCCccccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 8732 3456666622 233345789999999988652 45899999874
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=4.8e-14 Score=133.71 Aligned_cols=245 Identities=9% Similarity=-0.027 Sum_probs=158.0
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecC-C----eEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeec
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGIN-G----IIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSL 156 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~d-g----~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~ 156 (394)
+...+...+|+ |||+ +|+.+..+ | .|++||+.+++.......+. .+..++|+| +++.|+.++.
T Consensus 123 ~~~~~~~~~~S--PDg~-~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wsp-Dg~~l~~~~~------- 190 (710)
T 2xdw_A 123 GTVALRGYAFS--EDGE-YFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTH-DGKGMFYNAY------- 190 (710)
T ss_dssp SCEEEEEEEEC--TTSS-EEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECT-TSSEEEEEEC-------
T ss_pred CCEEEEEEEEC--CCCC-EEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEe-CCCEEEEEEE-------
Confidence 33456666666 9999 77755443 3 89999999998766433332 367899999 6666666665
Q ss_pred cceeeeeeeccceeeeccCCc----------------EEEEEecCCcE--EEEeeccCCCcccEEEEEecCCCCeeEEee
Q 016185 157 SLICLLLFIRSNCLRVGQDES----------------VRLWNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~----------------i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~ 218 (394)
++. |++|++.+++. ...+.. ..+...+..+.|+| ++++|+..
T Consensus 191 ------------------~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~Sp-Dg~~l~~~ 250 (710)
T 2xdw_A 191 ------------------PQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSD-DGRYVLLS 250 (710)
T ss_dssp ------------------CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECT-TSCEEEEE
T ss_pred ------------------CCccccccccccccCCCCEEEEEECCCCcccceEEecc-CCCCeEEEEEEEcC-CCCEEEEE
Confidence 443 99999987762 222221 13456688999999 88888776
Q ss_pred cc-----CCcEEEEEccc------cceeeccccccCCCCCCCCccccccceeeeecCCCceEE-EEEeCcEEEEeec---
Q 016185 219 GM-----DNTVKIWSMKE------FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFILSKSV--- 283 (394)
Q Consensus 219 ~~-----dg~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~~--- 283 (394)
+. +..|++||+.+ +. .....+..+...+.. +..+|+.++..+.
T Consensus 251 ~~~~~~~~~~l~~~d~~~~~~~~~~~----------------------~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 251 IREGCDPVNRLWYCDLQQESNGITGI----------------------LKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp EECSSSSCCEEEEEEGGGSSSSSCSS----------------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTC
T ss_pred EEccCCCccEEEEEECcccccccCCc----------------------cceEEeeCCCCcEEEEEeccCCEEEEEECCCC
Confidence 64 56899999876 21 012333444444433 2233776665544
Q ss_pred -CCeEEEecCCCCCCCCCCCcceecccccCCC--CCeEEEEEeecCCcceEEEEeCCCcE--EEEEecCCCceeeEEecc
Q 016185 284 -DNEIVLWEPKMKEQSPGEGTADILQKYPVPE--CDIWFIKFSCDFHYNAAAIGNREGKI--FVWELQSSPPVLIARLSH 358 (394)
Q Consensus 284 -dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~l~~~~~dg~i--~iwd~~~~~~~~~~~~~~ 358 (394)
.+.|.+||+.++... ....+..+. ..+..+.|++++ .++++...++.. ++|++.+++ ....+.
T Consensus 309 ~~~~l~~~d~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~--~lv~~~~~~g~~~l~~~~~~~g~--~~~~l~- 376 (710)
T 2xdw_A 309 PNYRLINIDFTDPEES-------KWKVLVPEHEKDVLEWVACVRSN--FLVLCYLHDVKNTLQLHDLATGA--LLKIFP- 376 (710)
T ss_dssp TTCEEEEEETTSCCGG-------GCEEEECCCSSCEEEEEEEETTT--EEEEEEEETTEEEEEEEETTTCC--EEEEEC-
T ss_pred CCCEEEEEeCCCCCcc-------cceeccCCCCCCeEEEEEEEcCC--EEEEEEEECCEEEEEEEECCCCC--EEEecC-
Confidence 346999998875310 112222232 257788888666 588888888855 455654553 445565
Q ss_pred CCccCCeeEEEeccCCCEEEEe----ccCCeEEEEEcCC
Q 016185 359 AQSKSPIRQTAMSYDGSTILSC----CEDGAIWRWDAIP 393 (394)
Q Consensus 359 ~~~~~~v~~~~~s~~~~~l~s~----~~dg~i~iwd~~~ 393 (394)
.+.+.+..+.++|+++.|+.. ...+.|++||+.+
T Consensus 377 -~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 377 -LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp -CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred -CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 446788899999998776633 3457899999864
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=6.6e-15 Score=139.20 Aligned_cols=244 Identities=11% Similarity=-0.007 Sum_probs=155.9
Q ss_pred CcccceEEEEEEEcCCCCcEEE-----EeecCCeEEEEECCCCeeEEEEEecCCce--eEEEEcCCCCcEEEEceeeeEE
Q 016185 81 DKEESFYTVSWACNVDGIPFLV-----AGGINGIIRVIDVSNEKLHKSFVGHGDSI--NEIRTQPLKPSLVVSASKVIII 153 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~-----s~~~dg~i~vwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~~~~i~~ 153 (394)
+|...+..++|+ |||+ +|+ .|+.+..|++||+.+++.+. ..+...+ ..++|+| +++.|+.++.
T Consensus 118 ~~~~~~~~~~~S--PDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~---- 187 (695)
T 2bkl_A 118 DGTVSLGTWAVS--WDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWL---- 187 (695)
T ss_dssp SSCEEEEEEEEC--TTSS-EEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEEC----
T ss_pred CCCEEEEEEEEC--CCCC-EEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEe----
Confidence 344456667776 9999 777 44455789999999987641 1122222 6899999 6677777665
Q ss_pred eeccceeeeeeeccceeeeccCCc-------------EEEEEecCCcE--EEEeeccCCCcccEEEEEecCCCCeeEEee
Q 016185 154 SSLSLICLLLFIRSNCLRVGQDES-------------VRLWNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218 (394)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~d~~-------------i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~ 218 (394)
|.. |++|++.+++. ...+. ...+...+.++.|+| ++++|+..
T Consensus 188 ---------------------d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~-~~~~~~~~~~~~~Sp-DG~~l~~~ 244 (695)
T 2bkl_A 188 ---------------------PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE-RTGDPTTFLQSDLSR-DGKYLFVY 244 (695)
T ss_dssp ---------------------CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC-CCCCTTCEEEEEECT-TSCCEEEE
T ss_pred ---------------------cCCCCCccccCCCCCEEEEEECCCCchhceEEEe-cCCCCEEEEEEEECC-CCCEEEEE
Confidence 554 99999988762 22222 113556789999999 88888887
Q ss_pred ccCC----cEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEee---cCCeEEEe
Q 016185 219 GMDN----TVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKS---VDNEIVLW 290 (394)
Q Consensus 219 ~~dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~---~dg~i~~~ 290 (394)
+.++ .|.+|+..++ ....+..+...+....+. +++++... .++.|.+|
T Consensus 245 ~~~~~~~~~l~~~~~~~~------------------------~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~ 300 (695)
T 2bkl_A 245 ILRGWSENDVYWKRPGEK------------------------DFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEV 300 (695)
T ss_dssp EEETTTEEEEEEECTTCS------------------------SCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEE
T ss_pred EeCCCCceEEEEEcCCCC------------------------ceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEE
Confidence 7665 5666654431 122333344444444444 66333333 25889999
Q ss_pred cCCCCCCCCCCCcceecccccC-C-CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEE
Q 016185 291 EPKMKEQSPGEGTADILQKYPV-P-ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQT 368 (394)
Q Consensus 291 d~~~~~~~~~~~~~~~~~~~~~-~-~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 368 (394)
|+.+++.. ....+.. + ...+..++++ ++ .++++...|+..++|.+.... .....+.. ...+.+..+
T Consensus 301 d~~~~~~~-------~~~~l~~~~~~~~l~~~~~~-~~--~lv~~~~~dg~~~l~~~~~~g-~~~~~l~~-~~~~~v~~~ 368 (695)
T 2bkl_A 301 DPAKPARA-------SWKEIVPEDSSASLLSVSIV-GG--HLSLEYLKDATSEVRVATLKG-KPVRTVQL-PGVGAASNL 368 (695)
T ss_dssp BTTBCSGG-------GCEEEECCCSSCEEEEEEEE-TT--EEEEEEEETTEEEEEEEETTC-CEEEECCC-SSSSEECCC
T ss_pred eCCCCCcc-------CCeEEecCCCCCeEEEEEEE-CC--EEEEEEEECCEEEEEEEeCCC-CeeEEecC-CCCeEEEEe
Confidence 99875410 0112222 2 3457778887 44 588889999999988776321 23444441 124678888
Q ss_pred EeccCCCEEE----EeccCCeEEEEEcCC
Q 016185 369 AMSYDGSTIL----SCCEDGAIWRWDAIP 393 (394)
Q Consensus 369 ~~s~~~~~l~----s~~~dg~i~iwd~~~ 393 (394)
+++|+++.|+ +....+.|++||+.+
T Consensus 369 ~~s~d~~~l~~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 369 MGLEDLDDAYYVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp BSCTTCSEEEEEEEETTEEEEEEEEETTT
T ss_pred ecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 9999998777 444568899999864
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.70 E-value=2.3e-14 Score=119.12 Aligned_cols=219 Identities=11% Similarity=0.065 Sum_probs=155.3
Q ss_pred CCCcEEEEeecCCeEEEEECCCCeeEEEEEecC-CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeecc
Q 016185 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHG-DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 96 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
.++ +|++++.++.|.+||.++++.+.++..+. ..+.++.++| ++++++ +.
T Consensus 4 ~~~-~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~------------------------- 54 (276)
T 3no2_A 4 PQH-LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SY------------------------- 54 (276)
T ss_dssp CCE-EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--EC-------------------------
T ss_pred CCc-EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eC-------------------------
Confidence 345 89999999999999999999999999776 4789999999 778888 34
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeecc-CCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
++.|..||. +|+.+..+.. +....+.++.+.+ +++++++.+. ++.+..+|. +++...+.... .
T Consensus 55 ~~~V~~~d~-~G~~~W~~~~--~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~--~--------- 118 (276)
T 3no2_A 55 SKGAKMITR-DGRELWNIAA--PAGCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFE--T--------- 118 (276)
T ss_dssp BSEEEEECT-TSCEEEEEEC--CTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEEC--C---------
T ss_pred CCCEEEECC-CCCEEEEEcC--CCCccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEecc--C---------
Confidence 678999998 8999998883 1235788999999 9998888876 777777775 33221111000 0
Q ss_pred cccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceE
Q 016185 254 VQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 331 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 331 (394)
....+......+.+. |+++++...++.|..||.+ ++ .+.++... .....+.+.+++ +++
T Consensus 119 ------~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~---------~~w~~~~~-~~~~~~~~~~~g--~~~ 179 (276)
T 3no2_A 119 ------GIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ---------LLNSVKLS-GTPFSSAFLDNG--DCL 179 (276)
T ss_dssp ------SCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC---------EEEEEECS-SCCCEEEECTTS--CEE
T ss_pred ------CCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC---------EEEEEECC-CCccceeEcCCC--CEE
Confidence 000111122223333 8899999999999999988 65 44444443 234567778888 688
Q ss_pred EEEeCCCcEEEEEecCCCceeeEEeccC---C-ccCCeeEEEeccCCCEEEEe
Q 016185 332 AIGNREGKIFVWELQSSPPVLIARLSHA---Q-SKSPIRQTAMSYDGSTILSC 380 (394)
Q Consensus 332 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~-~~~~v~~~~~s~~~~~l~s~ 380 (394)
+++..++.|..+|..+++ .+.++... + ....+..++..++|.++++.
T Consensus 180 v~~~~~~~v~~~d~~tG~--~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 180 VACGDAHCFVQLNLESNR--IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EECBTTSEEEEECTTTCC--EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEeCCCCeEEEEeCcCCc--EEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 888888899999998875 45555411 1 12347888899999988876
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=1.6e-13 Score=125.04 Aligned_cols=307 Identities=10% Similarity=0.061 Sum_probs=192.3
Q ss_pred cceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcC--CCceeEEeeecccCCcccceEEEEEEEc----C
Q 016185 23 YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCL--EGGVIAALQSYVDEDKEESFYTVSWACN----V 95 (394)
Q Consensus 23 ~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~ 95 (394)
.+....+.. ...+..++|+| +|+++++++.++ |.+||+. +++.+..+.. ...-..++ ++ |
T Consensus 187 ~~v~~~i~~-g~~p~~v~~Sp----DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~------G~~P~~ia--~s~~~~p 253 (567)
T 1qks_A 187 YEIKTVLDT-GYAVHISRLSA----SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI------GSEARSIE--TSKMEGW 253 (567)
T ss_dssp CCEEEEEEC-SSCEEEEEECT----TSCEEEEEETTSEEEEEETTSSSCCEEEEEEC------CSEEEEEE--ECCSTTC
T ss_pred CeEEEEEeC-CCCccceEECC----CCCEEEEEcCCCeEEEEECCCCCCcEeEEEec------CCCCceeE--EccccCC
Confidence 344445542 23567899999 788888888776 9999996 7777766652 11223444 45 4
Q ss_pred CCCcEEEEeecCCeEEEEECCCCeeEEEEEec-----------CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeee
Q 016185 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH-----------GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 96 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~ 164 (394)
+|+.++++...++.|.|+|..+.+.+..+... ...+..+..++++..++++...
T Consensus 254 DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~--------------- 318 (567)
T 1qks_A 254 EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE--------------- 318 (567)
T ss_dssp TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT---------------
T ss_pred CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC---------------
Confidence 99934444455699999999999988887632 1257788888866666666666
Q ss_pred eccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEee-ccCCcEEEEEccccceeeccccccC
Q 016185 165 IRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC-GMDNTVKIWSMKEFWTYVEKSFTWT 243 (394)
Q Consensus 165 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~ 243 (394)
+|.|.++|....+.+..... .......++.|+| ++++|+++ ..++.|.++|+.+++.....
T Consensus 319 ----------~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i----- 380 (567)
T 1qks_A 319 ----------TGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIE----- 380 (567)
T ss_dssp ----------TTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEE-----
T ss_pred ----------CCeEEEEecCCCccceeeee--eccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEE-----
Confidence 89999999876543322211 1345567889999 77776554 46889999999985421100
Q ss_pred CCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEee-cCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEE
Q 016185 244 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKS-VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF 319 (394)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 319 (394)
++.....|+..-..+ ++ +. ..+++. .++.|.++|..+.+... ...+.++++......-..
T Consensus 381 -------------~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~--~~~kvv~~i~~~g~g~~~ 444 (567)
T 1qks_A 381 -------------DTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPD--NAWKILDSFPALGGGSLF 444 (567)
T ss_dssp -------------ECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTT--TBTSEEEEEECSCSCCCC
T ss_pred -------------eccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCcc--ccCEEEEEEecCCCCCEE
Confidence 000011233221112 22 23 444443 56899999998743110 012244555544333356
Q ss_pred EEEeecCCcceEEEEeC-------CCcEEEEEecCCC----ceeeEEecc------CCccCCeeEEEeccCCCEEEEec-
Q 016185 320 IKFSCDFHYNAAAIGNR-------EGKIFVWELQSSP----PVLIARLSH------AQSKSPIRQTAMSYDGSTILSCC- 381 (394)
Q Consensus 320 ~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~----~~~~~~~~~------~~~~~~v~~~~~s~~~~~l~s~~- 381 (394)
+..+|+++ ++.+... .++|.++|+.+.+ ......+.. ......+..+.|+|+|+.+..+.
T Consensus 445 i~~~p~~~--~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~ 522 (567)
T 1qks_A 445 IKTHPNSQ--YLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVW 522 (567)
T ss_dssp EECCTTCS--EEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEE
T ss_pred EEeCCCCC--eEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEee
Confidence 78899994 5666542 4699999998761 112222320 11235788999999999877663
Q ss_pred ----cCCeEEEEEcCC
Q 016185 382 ----EDGAIWRWDAIP 393 (394)
Q Consensus 382 ----~dg~i~iwd~~~ 393 (394)
.++.|.|+|.++
T Consensus 523 ~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 523 NGKDQESALVVVDDKT 538 (567)
T ss_dssp CCTTSCCEEEEEETTT
T ss_pred cCCCCCCcEEEEECCC
Confidence 378999999775
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=3.6e-14 Score=119.78 Aligned_cols=252 Identities=12% Similarity=-0.036 Sum_probs=158.1
Q ss_pred eeccCccceeEEEEEeeCCCcce-EEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 28 KLQEGKRPLYAVVFNFIDSRYFN-VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 28 ~~~~h~~~v~~i~~sp~~~~~~~-~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
.+..+.....+++|+| +++ +++++..++ |..|+..++ ...+. .+...+..+++. ++|+ ++++..
T Consensus 22 ~l~~~~~~~eg~~~d~----~g~~l~~~~~~~~~i~~~~~~~~--~~~~~-----~~~~~~~~l~~~--~dg~-l~v~~~ 87 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVP----ARSAVIFSDVRQNRTWAWSDDGQ--LSPEM-----HPSHHQNGHCLN--KQGH-LIACSH 87 (296)
T ss_dssp EEECCCSSEEEEEEEG----GGTEEEEEEGGGTEEEEEETTSC--EEEEE-----SSCSSEEEEEEC--TTCC-EEEEET
T ss_pred EEecCCccccCCeEeC----CCCEEEEEeCCCCEEEEEECCCC--eEEEE-----CCCCCcceeeEC--CCCc-EEEEec
Confidence 3445667788999999 676 777777666 999998776 44544 244567777776 9998 777777
Q ss_pred cCCeEEEEECCCCeeEEEEEec----CCceeEEEEcCCCCcEEEE----ceeeeEEeeccceeeeeeeccceeeeccCCc
Q 016185 106 INGIIRVIDVSNEKLHKSFVGH----GDSINEIRTQPLKPSLVVS----ASKVIIISSLSLICLLLFIRSNCLRVGQDES 177 (394)
Q Consensus 106 ~dg~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s----~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~ 177 (394)
.++.|.+||..+++........ ...+.+++++| +++++++ ++.. .............+.
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~------------~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 88 GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDK------------PEEGYGGEMELPGRW 154 (296)
T ss_dssp TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHC------------GGGSSCCCCCSSSCE
T ss_pred CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCcccccc------------ccccccccccCCCcE
Confidence 7789999999887754433322 23467899999 7778876 3310 000000000000234
Q ss_pred EEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccc-cceeeccccccCCCCCCCCcccccc
Q 016185 178 VRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYVQF 256 (394)
Q Consensus 178 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (394)
|..++.. ++. ..+. .+......++|+| +++.+++.+.++.|.+|++.. +....
T Consensus 155 l~~~~~~-g~~-~~~~---~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~-------------------- 208 (296)
T 3e5z_A 155 VFRLAPD-GTL-SAPI---RDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEY-------------------- 208 (296)
T ss_dssp EEEECTT-SCE-EEEE---CCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEE--------------------
T ss_pred EEEECCC-CCE-EEee---cCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcC--------------------
Confidence 5555543 443 3333 4666788999999 888778888889999999873 11000
Q ss_pred ceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEe-ecCCcceEEE
Q 016185 257 PVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS-CDFHYNAAAI 333 (394)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~l~~ 333 (394)
....+..+...+.+++++ |++.++. ++.|.+||.. ++ .+..+..+.. +.+++|. |++ ..|++
T Consensus 209 ~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~---------~~~~~~~~~~-~~~~~f~~~d~--~~L~v 273 (296)
T 3e5z_A 209 QGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD---------ELGRVLTPQT-TSNLCFGGPEG--RTLYM 273 (296)
T ss_dssp EEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC---------EEEEEECSSC-CCEEEEESTTS--CEEEE
T ss_pred CCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC---------EEEEEECCCC-ceeEEEECCCC--CEEEE
Confidence 011112344556678887 6555554 8899999986 33 4455555555 8889995 777 46777
Q ss_pred EeCCCcEEEEEecCC
Q 016185 334 GNREGKIFVWELQSS 348 (394)
Q Consensus 334 ~~~dg~i~iwd~~~~ 348 (394)
++.+ .+.-++..+.
T Consensus 274 ~t~~-~l~~~~~~~~ 287 (296)
T 3e5z_A 274 TVST-EFWSIETNVR 287 (296)
T ss_dssp EETT-EEEEEECSCC
T ss_pred EcCC-eEEEEEcccc
Confidence 7765 3444454443
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=1.7e-14 Score=119.98 Aligned_cols=237 Identities=10% Similarity=-0.007 Sum_probs=156.3
Q ss_pred ceEEEEEEEcCCCCcEEE-EeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeee
Q 016185 85 SFYTVSWACNVDGIPFLV-AGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLL 163 (394)
Q Consensus 85 ~v~~~~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~ 163 (394)
....+++. ++|+ +.+ +...++.|.+||..+.........+...+.++++.+ ++.++++ ..
T Consensus 25 ~p~~i~~~--~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~-~~-------------- 85 (270)
T 1rwi_B 25 SPSGVAVD--SAGN-VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVT-DF-------------- 85 (270)
T ss_dssp CEEEEEEC--TTCC-EEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEE-ET--------------
T ss_pred CccceEEC--CCCC-EEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEE-cC--------------
Confidence 34456655 8998 666 557789999999765443221122335678899998 5565544 43
Q ss_pred eeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccC
Q 016185 164 FIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 243 (394)
Q Consensus 164 ~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 243 (394)
++.|.+||...+... .+.. .....+.++++++ +++++++...++.|.+|+..+...
T Consensus 86 -----------~~~i~~~d~~~~~~~-~~~~--~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~--------- 141 (270)
T 1rwi_B 86 -----------NNRVVTLAAGSNNQT-VLPF--DGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQ--------- 141 (270)
T ss_dssp -----------TTEEEEECTTCSCCE-ECCC--CSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSC---------
T ss_pred -----------CCEEEEEeCCCceEe-eeec--CCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCcee---------
Confidence 678999998655433 2321 2336789999999 888888777788999997655211
Q ss_pred CCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEE
Q 016185 244 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 321 (394)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 321 (394)
..........+.+++++ ++++++...++.|.+||...... ..........+..++
T Consensus 142 --------------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~---------~~~~~~~~~~p~~i~ 198 (270)
T 1rwi_B 142 --------------TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ---------VVLPFTDITAPWGIA 198 (270)
T ss_dssp --------------EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE---------EECCCSSCCSEEEEE
T ss_pred --------------EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce---------EeecccCCCCceEEE
Confidence 11111122345667776 66677766788999999876531 111112225678999
Q ss_pred EeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 322 FSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 322 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+++++ .++++...++.|.+|+...... ..... .+...+.+++++++|+++++...++.|+++++..
T Consensus 199 ~d~~g--~l~v~~~~~~~v~~~~~~~~~~---~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 199 VDEAG--TVYVTEHNTNQVVKLLAGSTTS---TVLPF-TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp ECTTC--CEEEEETTTSCEEEECTTCSCC---EECCC-CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred ECCCC--CEEEEECCCCcEEEEcCCCCcc---eeecc-CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 99998 5677777788999999876532 12221 2335789999999999889999999999998753
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=6.2e-14 Score=120.46 Aligned_cols=246 Identities=9% Similarity=-0.013 Sum_probs=152.5
Q ss_pred eeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 27 NKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 27 ~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
..+..+...+.+++|+| ++++++++..++ |.+||..+++...... .+...+..+++. ++|+ ++++..
T Consensus 38 ~~~~~~~~~~~~~~~~~----~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~~~~i~~~--~dg~-l~v~~~ 105 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDR----QGQLFLLDVFEGNIFKINPETKEIKRPFV-----SHKANPAAIKIH--KDGR-LFVCYL 105 (333)
T ss_dssp EEEESSCCCEEEEEECT----TSCEEEEETTTCEEEEECTTTCCEEEEEE-----CSSSSEEEEEEC--TTSC-EEEEEC
T ss_pred EEEeccCccccCcEECC----CCCEEEEECCCCEEEEEeCCCCcEEEEee-----CCCCCcceEEEC--CCCc-EEEEeC
Confidence 34556667789999998 788888877766 9999988776544332 234567788777 9998 777666
Q ss_pred cC----CeEEEEECCCCeeEEEEE--ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEE
Q 016185 106 IN----GIIRVIDVSNEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVR 179 (394)
Q Consensus 106 ~d----g~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 179 (394)
.+ +.|.+||..+++....+. .+...+.+++++| ++.++++.... . .....+.|.
T Consensus 106 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~----------------~---~~~~~~~l~ 165 (333)
T 2dg1_A 106 GDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRG----------------Y---STNPLGGVY 165 (333)
T ss_dssp TTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCC----------------B---TTBCCEEEE
T ss_pred CCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccc----------------c---ccCCCceEE
Confidence 65 689999988776543433 2345689999999 66777665420 0 000024455
Q ss_pred EEEecCCcEEEEeeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEcccc-ceeeccccccCCCCCCCCccccccc
Q 016185 180 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKEF-WTYVEKSFTWTDLPSKFPTKYVQFP 257 (394)
Q Consensus 180 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (394)
.+|..+++...... ....+..++|+| +++ ++++.+.++.|.+||+... ...... ....
T Consensus 166 ~~~~~~~~~~~~~~----~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~---------------~~~~ 225 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQ----NISVANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPF---------------GATI 225 (333)
T ss_dssp EECTTSCCEEEEEE----EESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEE---------------EEEE
T ss_pred EEeCCCCEEEEeec----CCCcccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccc---------------cceE
Confidence 55554444433322 344578999999 776 4455567889999998641 100000 0000
Q ss_pred eeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCC------CCeEEEEEeecCCcc
Q 016185 258 VFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE------CDIWFIKFSCDFHYN 329 (394)
Q Consensus 258 ~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~~~~~ 329 (394)
......+ ..+..++++ |++.++...++.|.+||.. ++ .+..+..+. ..+..++|+|++.
T Consensus 226 ~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~---------~~~~~~~~~~~~g~~~~~~~~~~~~dg~-- 292 (333)
T 2dg1_A 226 PYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GY---------PIGQILIPGRDEGHMLRSTHPQFIPGTN-- 292 (333)
T ss_dssp EEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SC---------EEEEEECTTGGGTCSCBCCEEEECTTSC--
T ss_pred EEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-CC---------EEEEEEcCCCccccccCcceEEECCCCC--
Confidence 0111122 356778887 6677777778999999984 32 223333222 2578899998873
Q ss_pred eEEEEeCC
Q 016185 330 AAAIGNRE 337 (394)
Q Consensus 330 ~l~~~~~d 337 (394)
.|+.++.+
T Consensus 293 ~L~v~~~~ 300 (333)
T 2dg1_A 293 QLIICSND 300 (333)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeCc
Confidence 45544444
No 190
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=2.1e-14 Score=119.47 Aligned_cols=237 Identities=9% Similarity=-0.058 Sum_probs=156.5
Q ss_pred ceeEEEEEeeCCCcceEEE-EecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 35 PLYAVVFNFIDSRYFNVFA-TVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 35 ~v~~i~~sp~~~~~~~~la-s~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
...+++++| +|++++ +...++ |.+|+..++... .+.. .....+..+++. ++|+ ++++.. ++.|.+
T Consensus 25 ~p~~i~~~~----~g~l~v~~~~~~~~i~~~~~~~~~~~-~~~~----~~~~~p~~i~~~--~~g~-l~v~~~-~~~i~~ 91 (270)
T 1rwi_B 25 SPSGVAVDS----AGNVYVTSEGMYGRVVKLATGSTGTT-VLPF----NGLYQPQGLAVD--GAGT-VYVTDF-NNRVVT 91 (270)
T ss_dssp CEEEEEECT----TCCEEEEECSSSCEEEEECC-----E-ECCC----CSCCSCCCEEEC--TTCC-EEEEET-TTEEEE
T ss_pred CccceEECC----CCCEEEEccCCCCcEEEecCCCcccc-eEee----CCcCCcceeEEC--CCCC-EEEEcC-CCEEEE
Confidence 678999998 678777 545544 999996554322 2110 122345567666 8888 666655 889999
Q ss_pred EECCCCeeEEEEE-ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE
Q 016185 113 IDVSNEKLHKSFV-GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI 191 (394)
Q Consensus 113 wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 191 (394)
||...... ..+. .....+..+++.+ ++.++++... ++.|.+|+..+......
T Consensus 92 ~d~~~~~~-~~~~~~~~~~p~~i~~~~-~g~l~v~~~~-------------------------~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 92 LAAGSNNQ-TVLPFDGLNYPEGLAVDT-QGAVYVADRG-------------------------NNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp ECTTCSCC-EECCCCSCSSEEEEEECT-TCCEEEEEGG-------------------------GTEEEEECTTCCSCEEC
T ss_pred EeCCCceE-eeeecCCcCCCcceEECC-CCCEEEEECC-------------------------CCEEEEEECCCceeEee
Confidence 99765543 3332 2335688999999 6677777666 78899997655443322
Q ss_pred eeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEE
Q 016185 192 FAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN 271 (394)
Q Consensus 192 ~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 271 (394)
.. .....+.++++++ +++++++...++.|.+||...... ......+...+.++
T Consensus 145 ~~---~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~-----------------------~~~~~~~~~~p~~i 197 (270)
T 1rwi_B 145 PF---TGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQ-----------------------VVLPFTDITAPWGI 197 (270)
T ss_dssp CC---CSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCE-----------------------EECCCSSCCSEEEE
T ss_pred cc---ccCCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCce-----------------------EeecccCCCCceEE
Confidence 21 2334678899999 888777777788999999876321 11111222557788
Q ss_pred EEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 272 RWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 272 ~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
+++ |.++++...++.|.+||...... ......+...+..+++++++ .++++...++.|+++++...+
T Consensus 198 ~~d~~g~l~v~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 198 AVDEAGTVYVTEHNTNQVVKLLAGSTTS---------TVLPFTGLNTPLAVAVDSDR--TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCCEEEEETTTSCEEEECTTCSCC---------EECCCCSCSCEEEEEECTTC--CEEEEEGGGTEEEEECCCGGG
T ss_pred EECCCCCEEEEECCCCcEEEEcCCCCcc---------eeeccCCCCCceeEEECCCC--CEEEEECCCCEEEEEcCCCcc
Confidence 887 55666666788999999876431 11111223468899999998 578888889999999987653
No 191
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.67 E-value=1.4e-12 Score=110.09 Aligned_cols=278 Identities=8% Similarity=-0.038 Sum_probs=183.2
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCe
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGI 109 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~ 109 (394)
.....+.++++.+ +|+++++...++ |.+||.. ++.. .+.. +.....+..+++. ++|. +.++...++.
T Consensus 17 ~~~~~p~~i~~d~----~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~---~~~~~~~~~i~~~--~~g~-l~v~~~~~~~ 84 (300)
T 2qc5_A 17 IPDSGPYGITSSE----DGKVWFTQHKANKISSLDQS-GRIK-EFEV---PTPDAKVMCLIVS--SLGD-IWFTENGANK 84 (300)
T ss_dssp STTCCEEEEEECT----TSCEEEEETTTTEEEEECTT-SCEE-EEEC---SSTTCCEEEEEEC--TTSC-EEEEETTTTE
T ss_pred CCCCCcceeeECC----CCCEEEEcCCCCeEEEECCC-CceE-EEEC---CCCCCcceeEEEC--CCCC-EEEEecCCCe
Confidence 3456789999998 688888876555 9999977 5433 2221 1233456667665 8888 6666666789
Q ss_pred EEEEECCCCeeEEEEE--ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc
Q 016185 110 IRVIDVSNEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI 187 (394)
Q Consensus 110 i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~ 187 (394)
|..||.. ++. ..+. .....+.++++.+ ++.++++... ++.|..+|.. ++
T Consensus 85 v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~-------------------------~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 85 IGKLSKK-GGF-TEYPLPQPDSGPYGITEGL-NGDIWFTQLN-------------------------GDRIGKLTAD-GT 135 (300)
T ss_dssp EEEECTT-SCE-EEEECSSTTCCEEEEEECS-TTCEEEEETT-------------------------TTEEEEECTT-SC
T ss_pred EEEECCC-CCe-EEecCCCCCCCCccceECC-CCCEEEEccC-------------------------CCeEEEECCC-CC
Confidence 9999987 554 3333 2345688999998 6677777666 7889999987 55
Q ss_pred EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCc
Q 016185 188 CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY 267 (394)
Q Consensus 188 ~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (394)
...... ......+.++++++ +++++++...++.|..+|... +. .......+...
T Consensus 136 ~~~~~~--~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g-~~----------------------~~~~~~~~~~~ 189 (300)
T 2qc5_A 136 IYEYDL--PNKGSYPAFITLGS-DNALWFTENQNNSIGRITNTG-KL----------------------EEYPLPTNAAA 189 (300)
T ss_dssp EEEEEC--SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECTTC-CE----------------------EEEECSSTTCC
T ss_pred EEEccC--CCCCCCceeEEECC-CCCEEEEecCCCeEEEECCCC-cE----------------------EEeeCCCCCCC
Confidence 442211 12456789999999 888777776678899999832 11 01111223345
Q ss_pred eEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEe
Q 016185 268 VDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 345 (394)
Q Consensus 268 i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 345 (394)
+.++.++ +.+.++....+.|.+||. +++. ...........+..+++.+++ .++++...++.|..||.
T Consensus 190 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIMGNKIGRITT-TGEI--------SEYDIPTPNARPHAITAGKNS--EIWFTEWGANQIGRITN 258 (300)
T ss_dssp EEEEEECTTSSEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCEEEEEECSTT--CEEEEETTTTEEEEECT
T ss_pred cceEEECCCCCEEEEccCCCEEEEEcC-CCcE--------EEEECCCCCCCceEEEECCCC--CEEEeccCCCeEEEECC
Confidence 7778886 556666566778999998 3321 111122334567899999998 45555556789999998
Q ss_pred cCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 346 QSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
+++ +..+........+.+++++++|+++++.. . .|..+|.+
T Consensus 259 -~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 259 -DNT---IQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp -TSC---EEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred -CCc---EEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 342 22232223346688999999998777665 5 77777754
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=2.6e-15 Score=141.94 Aligned_cols=248 Identities=10% Similarity=-0.040 Sum_probs=155.0
Q ss_pred cCccceeEEEEEeeCCCcceEEE-----EecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEe
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFA-----TVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~la-----s~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~ 104 (394)
+|...+.+++||| ||++|| .|+++. |++||+.+++.+. .... .......++|+ |||+ .|+.+
T Consensus 118 ~~~~~~~~~~~SP----DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~---~~~~~~~~~ws--pDg~-~l~~~ 185 (695)
T 2bkl_A 118 DGTVSLGTWAVSW----DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVI---EGGKYATPKWT--PDSK-GFYYE 185 (695)
T ss_dssp SSCEEEEEEEECT----TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCB---SCCTTCCCEEC--TTSS-EEEEE
T ss_pred CCCEEEEEEEECC----CCCEEEEEECCCCCceEEEEEEECCCCCCcC--Cccc---CcccccceEEe--cCCC-EEEEE
Confidence 5666899999999 788888 344445 9999999987641 1010 11112457787 9999 88888
Q ss_pred ecCCe-------------EEEEECCCCee----EEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeecc
Q 016185 105 GINGI-------------IRVIDVSNEKL----HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRS 167 (394)
Q Consensus 105 ~~dg~-------------i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~ 167 (394)
+.|.. |++|++.+++. +.....|...+..+.|+| +++.|+..+.
T Consensus 186 ~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~------------------ 246 (695)
T 2bkl_A 186 WLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYIL------------------ 246 (695)
T ss_dssp ECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEE------------------
T ss_pred EecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEe------------------
Confidence 77665 99999987752 222234556788999999 5566665554
Q ss_pred ceeeeccCC----cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeec---cCCcEEEEEccccceeecccc
Q 016185 168 NCLRVGQDE----SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG---MDNTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 168 ~~~~~~~d~----~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~ 240 (394)
++ .|.+|+..+++...... +...+....+ + ++.+++... .++.|.+||+.++..
T Consensus 247 -------~~~~~~~l~~~~~~~~~~~~l~~----~~~~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~------ 307 (695)
T 2bkl_A 247 -------RGWSENDVYWKRPGEKDFRLLVK----GVGAKYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPAR------ 307 (695)
T ss_dssp -------ETTTEEEEEEECTTCSSCEEEEE----CSSCCEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSG------
T ss_pred -------CCCCceEEEEEcCCCCceEEeec----CCCceEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCc------
Confidence 44 56666655555444333 4455566666 4 455555444 258899999877321
Q ss_pred ccCCCCCCCCccccccceeeeecC-CCceEEEEEe-CcEEEEeecCCeEEEecCCC-CCCCCCCCcceecccccCC-CCC
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVH-SNYVDCNRWL-GDFILSKSVDNEIVLWEPKM-KEQSPGEGTADILQKYPVP-ECD 316 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~-~~~ 316 (394)
......+..+ ...+..+.++ +.++++...|+..++|.+.. ++ ....+..+ ...
T Consensus 308 --------------~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~---------~~~~l~~~~~~~ 364 (695)
T 2bkl_A 308 --------------ASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGK---------PVRTVQLPGVGA 364 (695)
T ss_dssp --------------GGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCC---------EEEECCCSSSSE
T ss_pred --------------cCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC---------eeEEecCCCCeE
Confidence 0001122222 4457778887 56777888899888876542 22 23333433 445
Q ss_pred eEEEEEeecCCcceEEEEe---CCCcEEEEEecCCCcee
Q 016185 317 IWFIKFSCDFHYNAAAIGN---REGKIFVWELQSSPPVL 352 (394)
Q Consensus 317 i~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~ 352 (394)
+..+.++|++. .++++.+ ..++|++||+.+++...
T Consensus 365 v~~~~~s~d~~-~l~~~~ss~~~P~~v~~~d~~~g~~~~ 402 (695)
T 2bkl_A 365 ASNLMGLEDLD-DAYYVFTSFTTPRQIYKTSVSTGKSEL 402 (695)
T ss_dssp ECCCBSCTTCS-EEEEEEEETTEEEEEEEEETTTCCEEE
T ss_pred EEEeecCCCCC-EEEEEEcCCCCCCEEEEEECCCCcEEE
Confidence 66777888874 2333332 35789999998876433
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=5.6e-13 Score=114.04 Aligned_cols=252 Identities=7% Similarity=-0.067 Sum_probs=170.3
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
.....+++.. ++++++...++ |.+||..+++.+..+.. ......++++ ++++ +.++...++.|.+
T Consensus 44 ~~~~~i~~~~-----~~lyv~~~~~~~v~viD~~t~~~~~~i~~------~~~p~~i~~~--~~g~-lyv~~~~~~~v~~ 109 (328)
T 3dsm_A 44 DVAQSMVIRD-----GIGWIVVNNSHVIFAIDINTFKEVGRITG------FTSPRYIHFL--SDEK-AYVTQIWDYRIFI 109 (328)
T ss_dssp SCEEEEEEET-----TEEEEEEGGGTEEEEEETTTCCEEEEEEC------CSSEEEEEEE--ETTE-EEEEEBSCSEEEE
T ss_pred ccceEEEEEC-----CEEEEEEcCCCEEEEEECcccEEEEEcCC------CCCCcEEEEe--CCCe-EEEEECCCCeEEE
Confidence 4467788763 66777766555 99999999998887752 2345567776 7775 5555557899999
Q ss_pred EECCCCeeEEEEEecC-----CceeEEEEcCCCCcEEEEce-eeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 113 IDVSNEKLHKSFVGHG-----DSINEIRTQPLKPSLVVSAS-KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~s~~-~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
||..+++....+.... .....+++ . ++.++++.. . ++.|.++|+.++
T Consensus 110 iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~-------------------------~~~v~viD~~t~ 162 (328)
T 3dsm_A 110 INPKTYEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSY-------------------------QNRILKIDTETD 162 (328)
T ss_dssp EETTTTEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTT-------------------------CCEEEEEETTTT
T ss_pred EECCCCeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCC-------------------------CCEEEEEECCCC
Confidence 9999999888777433 14566777 3 555555543 4 789999999999
Q ss_pred cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC----------CcEEEEEccccceeeccccccCCCCCCCCcccccc
Q 016185 187 ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD----------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 256 (394)
Q Consensus 187 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (394)
+....+. .......++++| ++++++++..+ +.|.++|..+.+
T Consensus 163 ~~~~~i~----~g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~----------------------- 214 (328)
T 3dsm_A 163 KVVDELT----IGIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT----------------------- 214 (328)
T ss_dssp EEEEEEE----CSSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-----------------------
T ss_pred eEEEEEE----cCCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCe-----------------------
Confidence 9888876 233456889999 88877777655 789999998743
Q ss_pred ceeeeecC-CCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEE
Q 016185 257 PVFIASVH-SNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 333 (394)
Q Consensus 257 ~~~~~~~~-~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 333 (394)
....+... ......++++ ++.++++.. .|.+||..+++... .............++++|++. .++++
T Consensus 215 v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~-------~~~~~~~~~~p~gi~vdp~~g-~lyva 284 (328)
T 3dsm_A 215 VEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV-------RPFLEFRDTKYYGLTVNPNNG-EVYVA 284 (328)
T ss_dssp EEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS-------SCSBCCCSSCEEEEEECTTTC-CEEEE
T ss_pred EEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee-------eeeecCCCCceEEEEEcCCCC-eEEEE
Confidence 12222221 2357788887 667766554 89999998775310 011111135678899999553 45566
Q ss_pred E----eCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEe
Q 016185 334 G----NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAM 370 (394)
Q Consensus 334 ~----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 370 (394)
. ..++.|.+||.. ++ .+.++... .....++|
T Consensus 285 ~~~~y~~~~~V~v~d~~-g~--~~~~i~~G---~~P~~~~~ 319 (328)
T 3dsm_A 285 DAIDYQQQGIVYRYSPQ-GK--LIDEFYVG---IIPGAFCW 319 (328)
T ss_dssp ECTTSSSEEEEEEECTT-CC--EEEEEEEE---ESEEEEEE
T ss_pred cccccccCCEEEEECCC-CC--EEEEEEec---cCcceEEE
Confidence 5 578999999987 53 45555411 23445555
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.66 E-value=6.3e-14 Score=121.13 Aligned_cols=222 Identities=13% Similarity=0.031 Sum_probs=146.0
Q ss_pred cceeEEEEEeeCCCcceEEEEecCC----c--EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec-
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGN----R--VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI- 106 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d----~--i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~- 106 (394)
..+..++||| +|+.||..+.+ . |.+|++.+++...... ... +..++|+ |+|+ .|+.++.
T Consensus 59 ~~~~~~~~Sp----Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~------~~~-~~~~~ws--pdg~-~l~~~~~~ 124 (347)
T 2gop_A 59 ENATMPRISP----DGKKIAFMRANEEKKVSEIWVADLETLSSKKILE------AKN-IRSLEWN--EDSR-KLLIVGFK 124 (347)
T ss_dssp ESCEEEEECT----TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE------ESE-EEEEEEC--TTSS-EEEEEEEC
T ss_pred ccCCCeEECC----CCCEEEEEEeccCCCcceEEEEECCCCceEEEEc------CCC-ccceeEC--CCCC-EEEEEEcc
Confidence 4678899999 78888877642 2 8888988776544433 122 7778887 9999 6766653
Q ss_pred --------------------------CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeecccee
Q 016185 107 --------------------------NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLIC 160 (394)
Q Consensus 107 --------------------------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~ 160 (394)
...|.+||+.+++.+..+.. . .+..+.|+| ++ +++++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~----------- 189 (347)
T 2gop_A 125 RREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPH----------- 189 (347)
T ss_dssp CCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEEC-----------
T ss_pred CCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEec-----------
Confidence 25799999988877555655 3 788999999 55 7776654
Q ss_pred eeeeeccceeeeccC------C-cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC--------CcEE
Q 016185 161 LLLFIRSNCLRVGQD------E-SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD--------NTVK 225 (394)
Q Consensus 161 ~~~~~~~~~~~~~~d------~-~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d--------g~v~ 225 (394)
+ . ...+|.+.+++. ..+. .+ ..+..+ +| +++.|+.++.+ ..|.
T Consensus 190 --------------~~~~~~~~~~~~l~~~d~~~~-~~l~---~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~ 247 (347)
T 2gop_A 190 --------------REIIPQYFKFWDIYIWEDGKE-EKMF---EK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLY 247 (347)
T ss_dssp --------------CCSSCCSSCCEEEEEEETTEE-EEEE---EE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEE
T ss_pred --------------ccccccccccccEEEeCCCce-EEec---cC-cceeeE--CC-CCCEEEEEEccccCCccccceEE
Confidence 3 2 445665554444 3343 23 455554 88 88878776644 3677
Q ss_pred EEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEE-EEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcc
Q 016185 226 IWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTA 304 (394)
Q Consensus 226 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 304 (394)
+|| +++ .......+...+.. +.|+..++++++.++.+++| +.+++
T Consensus 248 ~~d--~~~-----------------------~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g~-------- 293 (347)
T 2gop_A 248 IYD--GKE-----------------------VMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDGE-------- 293 (347)
T ss_dssp EEC--SSC-----------------------EEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESSS--------
T ss_pred EEC--CCc-----------------------eEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCCc--------
Confidence 777 311 12223344556665 77763388888999999999 87332
Q ss_pred eecccccCCCCCeEEEEEeecCCcceEEEEeCCCcE-EEEEec
Q 016185 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI-FVWELQ 346 (394)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i-~iwd~~ 346 (394)
. ..+..+...+..++|+| . ++++++.++.. .+|.+.
T Consensus 294 -~-~~~~~~~~~v~~~~~s~-~---~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 294 -I-KPIAKGRHWIMGFDVDE-I---VVYLKETATRLRELFTWD 330 (347)
T ss_dssp -E-EEEECSSSEEEEEEESS-S---EEEEEECSSSCCEEEEES
T ss_pred -e-EEEecCCCeEEeeeeeC-c---EEEEEcCCCChHHheEeC
Confidence 1 22223356788999998 4 66666666654 788776
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.64 E-value=9.2e-14 Score=131.77 Aligned_cols=248 Identities=8% Similarity=-0.004 Sum_probs=158.3
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecC----C--cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEe
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGG----N--RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~----d--~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~ 104 (394)
+|...+..++||| ||++||.+.. + .|++||+.+++.+..... ...+..++|+ |||+ .|+.+
T Consensus 122 ~~~~~~~~~~~SP----Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~------~~~~~~~~ws--pDg~-~l~~~ 188 (710)
T 2xdw_A 122 DGTVALRGYAFSE----DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE------RVKFSCMAWT--HDGK-GMFYN 188 (710)
T ss_dssp TSCEEEEEEEECT----TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE------EECSCCEEEC--TTSS-EEEEE
T ss_pred CCCEEEEEEEECC----CCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc------CcccceEEEE--eCCC-EEEEE
Confidence 4555789999999 7888886543 2 499999999887653221 1225568888 9999 77777
Q ss_pred ecCCe----------------EEEEECCCCeeE--EEEEe--cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeee
Q 016185 105 GINGI----------------IRVIDVSNEKLH--KSFVG--HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 105 ~~dg~----------------i~vwd~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~ 164 (394)
+.++. |++|++.+++.. ..+.. |...+..+.|+| +++.|+..+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~--------------- 252 (710)
T 2xdw_A 189 AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIR--------------- 252 (710)
T ss_dssp ECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEE---------------
T ss_pred EECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEE---------------
Confidence 76655 999999877532 22232 445578999999 5666655442
Q ss_pred eccceeeec-cCCcEEEEEecC------Cc-EEEEeeccCCCcccEEEEEecCCCCeeEEeecc----CCcEEEEEcccc
Q 016185 165 IRSNCLRVG-QDESVRLWNVQT------GI-CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM----DNTVKIWSMKEF 232 (394)
Q Consensus 165 ~~~~~~~~~-~d~~i~vwd~~~------~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~----dg~v~iwd~~~~ 232 (394)
.+. .+..|.+||+.+ +. ....+. .+...+.. .|+| ++..|+..+. .+.|.+||+.++
T Consensus 253 ------~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~---~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 253 ------EGCDPVNRLWYCDLQQESNGITGILKWVKLI---DNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp ------CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE---CSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred ------ccCCCccEEEEEECcccccccCCccceEEee---CCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 000 145799999986 53 344454 45555554 4777 6665555443 236999998773
Q ss_pred ceeeccccccCCCCCCCCccccccceeeeecCCC--ceEEEEEe-C-cEEEEeecCCe--EEEecCCCCCCCCCCCccee
Q 016185 233 WTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN--YVDCNRWL-G-DFILSKSVDNE--IVLWEPKMKEQSPGEGTADI 306 (394)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~-~-~~l~~~~~dg~--i~~~d~~~~~~~~~~~~~~~ 306 (394)
.. .....+..|.. .+..+.|. + .++++...++. |.+||+.+++ .
T Consensus 322 ~~---------------------~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~---------~ 371 (710)
T 2xdw_A 322 EE---------------------SKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA---------L 371 (710)
T ss_dssp CG---------------------GGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC---------E
T ss_pred Cc---------------------ccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC---------E
Confidence 20 01223333433 57778887 4 46677777874 5667765554 3
Q ss_pred cccccCCCCCeEEEEEeecCCcceEEEEe---CCCcEEEEEecCCC
Q 016185 307 LQKYPVPECDIWFIKFSCDFHYNAAAIGN---REGKIFVWELQSSP 349 (394)
Q Consensus 307 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~ 349 (394)
+..+..+...+..+.++|++. .++++.+ ..+.|+.||+.+++
T Consensus 372 ~~~l~~~~~~v~~~~~s~d~~-~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 372 LKIFPLEVGSVVGYSGQKKDT-EIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECCCSSEEEEEECCTTCS-EEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEecCCCCceEEEEecCCCCC-EEEEEEeCCCCCCEEEEEECCCCc
Confidence 444555566788888999874 2333332 35789999998875
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.63 E-value=4.3e-12 Score=110.04 Aligned_cols=260 Identities=8% Similarity=-0.060 Sum_probs=162.5
Q ss_pred cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee----------cCCeEEEEECCCCeeEEEEEec-
Q 016185 59 RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH- 127 (394)
Q Consensus 59 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~- 127 (394)
.|.++|..+++.+..+.. ...+ .++++ |||+ +|+.+. .++.|.+||..+.+.+.++...
T Consensus 48 ~v~v~D~~t~~~~~~i~~-----g~~p--~i~~s--pDg~-~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~ 117 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNG-----GFLP--NPVAA--HSGS-EFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD 117 (373)
T ss_pred EEEEEECCCCeEEEEecC-----CCCC--CeEEC--CCCC-EEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC
Confidence 579999999988776652 1122 46666 9999 777664 3678999999988888777532
Q ss_pred ------CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE-eeccCCCcc
Q 016185 128 ------GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI-FAGAGGHRN 200 (394)
Q Consensus 128 ------~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~~~ 200 (394)
......+.|+| ++++|+.+.. ..++.|.++| .+++.+.. +. ...
T Consensus 118 ~~~~~~g~~p~~~~~sp-DG~~l~v~n~-----------------------~~~~~v~viD-~t~~~~~~~i~----~~~ 168 (373)
T 2mad_H 118 APRFDVGPYSWMNANTP-NNADLLFFQF-----------------------AAGPAVGLVV-QGGSSDDQLLS----SPT 168 (373)
T ss_pred ccccccCCCccceEECC-CCCEEEEEec-----------------------CCCCeEEEEE-CCCCEEeEEcC----CCc
Confidence 12345899999 6666666553 0047899999 99988877 65 222
Q ss_pred cEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCce-EEEEEe--CcE
Q 016185 201 EVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV-DCNRWL--GDF 277 (394)
Q Consensus 201 ~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~--~~~ 277 (394)
. +.+.|.....+++.+.||.+.++|. +++....... .+.. .....+ ....+. +..
T Consensus 169 ~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~---------------~~~~---~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 169 C---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLV---------------GAML---TAAQNLLTQPAQANKSGR 226 (373)
T ss_pred e---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEec---------------cccc---cCCcceeecceeEecCCE
Confidence 2 4445534466777888999999999 6432210000 0000 011111 111122 333
Q ss_pred EEEeecCCeEEEecCCCCCCCCCCCcceeccccc----------CCCCCeEEEEEeecCCcceEEEEeC----------C
Q 016185 278 ILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP----------VPECDIWFIKFSCDFHYNAAAIGNR----------E 337 (394)
Q Consensus 278 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~~l~~~~~----------d 337 (394)
++..+.++.+.+.|+...... .+..+. ........+.++|++. .++++.. .
T Consensus 227 ~~~~~~~~~v~vid~~~~~~~-------v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~--~lyV~~~~~~~~~~~~~~ 297 (373)
T 2mad_H 227 IVWPVYSGKILQADISAAGAT-------NKAPIDALSGGRKADTWRPGGWQQVAYLKSSD--GIYLLTSEQSAWKLHAAA 297 (373)
T ss_pred EEEEcCCceEEEEeccCCcce-------EeeeeeecCCcccccceecCceEeEEECCCCC--EEEEEeccCCcccccCCC
Confidence 333346788999998754311 111111 0112344578899985 4444332 3
Q ss_pred CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC-EEEEec-cCCeEEEEEcCC
Q 016185 338 GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSCC-EDGAIWRWDAIP 393 (394)
Q Consensus 338 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~ 393 (394)
+.|.++|..+.+ .+.++... .....++|+|||+ +|+++. .++.|.++|+.+
T Consensus 298 ~~V~VID~~t~~--vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 298 KEVTSVTGLVGQ--TSSQISLG---HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CeEEEEECCCCE--EEEEEECC---CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 579999998874 55666522 3588999999999 788877 589999999875
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.63 E-value=5.8e-13 Score=126.82 Aligned_cols=258 Identities=10% Similarity=-0.042 Sum_probs=151.3
Q ss_pred cceEEEEEEEcCCCCcEEEEeecC-----CeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccc
Q 016185 84 ESFYTVSWACNVDGIPFLVAGGIN-----GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158 (394)
Q Consensus 84 ~~v~~~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~ 158 (394)
..+...+|+ |||+ +|+.+..+ ..|++||+.+++.+... .+...+..++|+| + +.|+.++..- .
T Consensus 163 ~~~~~~~~S--PDG~-~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wsp-D-~~l~~~~~~~-----~- 230 (741)
T 1yr2_A 163 TALDAWAAS--DDGR-LLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLG-N-DALLYSRFAE-----P- 230 (741)
T ss_dssp EEEEEEEEC--TTSS-EEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEEST-T-SEEEEEECCC-----C-
T ss_pred EEEEeEEEC--CCCC-EEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEEC-C-CEEEEEEecC-----c-
Confidence 356666666 9999 66665443 35999999998875532 2222346789999 5 5555555400 0
Q ss_pred eeeeeeeccceeeeccCCcEEEEEecCCcE--EEEeeccCCCcccEEEEEecCCCCeeEEeeccCC-----cEEEEEccc
Q 016185 159 ICLLLFIRSNCLRVGQDESVRLWNVQTGIC--ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-----TVKIWSMKE 231 (394)
Q Consensus 159 ~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~ 231 (394)
...+.+-.......|++|++.+++. ...+.. ..+...+..+.|+| ++++|+..+.++ .|++||+.+
T Consensus 231 -----~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 231 -----KEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp -------------CCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred -----ccccccccCCCCCEEEEEECCCCchhCEEEecc-CCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCC
Confidence 0000000000122488999877652 223321 12334588999999 998887776544 899999877
Q ss_pred cceeeccccccCCCCCCCCccccccceeeeecCCCceEE-EEEeCcEEEEeec----CCeEEEecCCCCCCCCCCCccee
Q 016185 232 FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFILSKSV----DNEIVLWEPKMKEQSPGEGTADI 306 (394)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~~ 306 (394)
+.. .+...+..+...+.. +..+++.|+..+. ++.|.+||+.+.. . . .
T Consensus 304 ~~~---------------------~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~----~--~ 355 (741)
T 1yr2_A 304 GKI---------------------GPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-P----R--F 355 (741)
T ss_dssp TEE---------------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS-C----E--E
T ss_pred CCC---------------------cccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc-c----c--c
Confidence 310 102223333333332 3334777776665 4569999987642 0 0 1
Q ss_pred cccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEE----Eecc
Q 016185 307 LQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTIL----SCCE 382 (394)
Q Consensus 307 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~----s~~~ 382 (394)
...+..+...+..+.++ ++ .++++...|+..++|.+.... .....+.. ...+.+..+.++|+++.|+ +...
T Consensus 356 ~~l~~~~~~~l~~~~~~-~~--~lv~~~~~dg~~~l~~~~~~g-~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~ss~~~ 430 (741)
T 1yr2_A 356 DTVVPESKDNLESVGIA-GN--RLFASYIHDAKSQVLAFDLDG-KPAGAVSL-PGIGSASGLSGRPGDRHAYLSFSSFTQ 430 (741)
T ss_dssp EEEECCCSSEEEEEEEE-BT--EEEEEEEETTEEEEEEEETTS-CEEEECBC-SSSCEEEEEECCBTCSCEEEEEEETTE
T ss_pred EEEecCCCCeEEEEEEE-CC--EEEEEEEECCEEEEEEEeCCC-CceeeccC-CCCeEEEEeecCCCCCEEEEEEcCCCC
Confidence 11223333446666776 33 588888899988888776321 23444441 2346788999999988666 3345
Q ss_pred CCeEEEEEcCC
Q 016185 383 DGAIWRWDAIP 393 (394)
Q Consensus 383 dg~i~iwd~~~ 393 (394)
.+.|++||+.+
T Consensus 431 P~~i~~~d~~t 441 (741)
T 1yr2_A 431 PATVLALDPAT 441 (741)
T ss_dssp EEEEEEEETTT
T ss_pred CCEEEEEECCC
Confidence 68899999864
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=3.3e-12 Score=107.72 Aligned_cols=237 Identities=9% Similarity=-0.001 Sum_probs=161.0
Q ss_pred cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEE--ecCCceeEEEEcCCCCcEEEEceeeeEEeeccce
Q 016185 82 KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV--GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~ 159 (394)
+...+.++++. ++|. +.++...++.|.+||.. ++. ..+. .+...+.++++.+ ++.++++...
T Consensus 13 ~~~~~~~i~~d--~~g~-l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~---------- 76 (299)
T 2z2n_A 13 QDTGPYGITVS--DKGK-VWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISS-DGEVWFTENA---------- 76 (299)
T ss_dssp SSCCEEEEEEC--TTSC-EEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECT-TSCEEEEETT----------
T ss_pred cCCCccceEEC--CCCC-EEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECC-CCCEEEeCCC----------
Confidence 34566777766 8998 66666668899999987 543 3333 2456788999998 6677777666
Q ss_pred eeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccc
Q 016185 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKS 239 (394)
Q Consensus 160 ~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 239 (394)
++.|..||.. ++. ..+.. ......+.++++++ ++.++++...++.|..||. +++.
T Consensus 77 ---------------~~~i~~~~~~-g~~-~~~~~-~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~----- 131 (299)
T 2z2n_A 77 ---------------ANKIGRITKK-GII-KEYTL-PNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKI----- 131 (299)
T ss_dssp ---------------TTEEEEECTT-SCE-EEEEC-SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCE-----
T ss_pred ---------------CCeEEEECCC-CcE-EEEeC-CCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCE-----
Confidence 7889999975 443 23321 12456789999999 8888887777889999998 4211
Q ss_pred cccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCe
Q 016185 240 FTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 317 (394)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i 317 (394)
.......+...+..+.++ +.+.++...++.|..||. +++. ...........+
T Consensus 132 -----------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~ 185 (299)
T 2z2n_A 132 -----------------REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI--------TEFKIPTPASGP 185 (299)
T ss_dssp -----------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCE
T ss_pred -----------------EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE--------EEeeCCCCCCcc
Confidence 011112234457788887 556666666789999998 4431 011122334567
Q ss_pred EEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 318 WFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
..+++.+++ .++++...++.|.+||. +++. ..+....+...+.+++++++|+++++...++.|.+||.
T Consensus 186 ~~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 186 VGITKGNDD--ALWFVEIIGNKIGRITT-SGEI---TEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEEECTTS--SEEEEETTTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred eeEEECCCC--CEEEEccCCceEEEECC-CCcE---EEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 889999988 46666666789999998 5532 22322244567899999999998777767889999986
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=1.3e-12 Score=108.59 Aligned_cols=248 Identities=8% Similarity=-0.033 Sum_probs=163.3
Q ss_pred cceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEe
Q 016185 48 YFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG 126 (394)
Q Consensus 48 ~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 126 (394)
.+++|++++.++ |.+||..+|+.+..+.... ...+..+.+. |+|+ +++ +.++.|..||. +++.+.++..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~--pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK----GWECNSVAAT--KAGE-ILF--SYSKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT----TCCCCEEEEC--TTSC-EEE--ECBSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc----cCCCcCeEEC--CCCC-EEE--eCCCCEEEECC-CCCEEEEEcC
Confidence 378999999888 9999988999887777321 1345666666 9998 777 44788999998 8999999986
Q ss_pred cC-CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccC---CCcccE
Q 016185 127 HG-DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG---GHRNEV 202 (394)
Q Consensus 127 ~~-~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~---~~~~~i 202 (394)
+. ..+.++.+.+ +++++++.+. .++.|..+|. +|+.+..+.... .+....
T Consensus 74 ~~~~~~~~~~~~~-dG~~lv~~~~------------------------~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~ 127 (276)
T 3no2_A 74 PAGCEMQTARILP-DGNALVAWCG------------------------HPSTILEVNM-KGEVLSKTEFETGIERPHAQF 127 (276)
T ss_dssp CTTCEEEEEEECT-TSCEEEEEES------------------------TTEEEEEECT-TSCEEEEEEECCSCSSGGGSC
T ss_pred CCCccccccEECC-CCCEEEEecC------------------------CCCEEEEEeC-CCCEEEEEeccCCCCcccccc
Confidence 53 5788999999 6677776542 0345666664 677766665211 122345
Q ss_pred EEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEE
Q 016185 203 LSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILS 280 (394)
Q Consensus 203 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~ 280 (394)
..+++.+ +++++++...++.|..||.. ++. +..+... ....++... ++.+++
T Consensus 128 ~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~-----------------------~w~~~~~-~~~~~~~~~~~g~~~v~ 181 (276)
T 3no2_A 128 RQINKNK-KGNYLVPLFATSEVREIAPN-GQL-----------------------LNSVKLS-GTPFSSAFLDNGDCLVA 181 (276)
T ss_dssp SCCEECT-TSCEEEEETTTTEEEEECTT-SCE-----------------------EEEEECS-SCCCEEEECTTSCEEEE
T ss_pred cCceECC-CCCEEEEecCCCEEEEECCC-CCE-----------------------EEEEECC-CCccceeEcCCCCEEEE
Confidence 5667788 89999999999999999987 543 2222222 223333443 788888
Q ss_pred eecCCeEEEecCCCCCCCCCCCcceecccccCC------CCCeEEEEEeecCCcceEEEEeCC--------CcEEEEEec
Q 016185 281 KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP------ECDIWFIKFSCDFHYNAAAIGNRE--------GKIFVWELQ 346 (394)
Q Consensus 281 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~l~~~~~d--------g~i~iwd~~ 346 (394)
+..+++|..+|..+++ .+.++... -..+..++..+++ .++++.... +..+++++.
T Consensus 182 ~~~~~~v~~~d~~tG~---------~~w~~~~~~~~~~~l~~~~~~~~~~~G--~i~v~~~~g~~~~~~~~~~~~~~~~~ 250 (276)
T 3no2_A 182 CGDAHCFVQLNLESNR---------IVRRVNANDIEGVQLFFVAQLFPLQNG--GLYICNWQGHDREAGKGKHPQLVEID 250 (276)
T ss_dssp CBTTSEEEEECTTTCC---------EEEEEEGGGSBSCCCSEEEEEEECTTS--CEEEEEECTTCTTGGGSCCCSEEEEC
T ss_pred eCCCCeEEEEeCcCCc---------EEEEecCCCCCCccccccccceEcCCC--CEEEEeccCccccccccCCceEEEEC
Confidence 8888899999999776 33333211 1236778888888 456555311 244677774
Q ss_pred CCCceeeEEeccCCccCCeeEEE
Q 016185 347 SSPPVLIARLSHAQSKSPIRQTA 369 (394)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~v~~~~ 369 (394)
... ..+.++.....-+.+.+++
T Consensus 251 ~~g-~~~W~~~~~~~~~~~~~~~ 272 (276)
T 3no2_A 251 SEG-KVVWQLNDKVKFGMISTIC 272 (276)
T ss_dssp TTS-BEEEEECCTTTSCCCCEEE
T ss_pred CCC-CEEEEecCcccccceeeee
Confidence 432 4566666333335555543
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.60 E-value=1.6e-12 Score=111.38 Aligned_cols=269 Identities=10% Similarity=0.028 Sum_probs=168.9
Q ss_pred cceEEEEecC-----C-cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee----------cCCeEE
Q 016185 48 YFNVFATVGG-----N-RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG----------INGIIR 111 (394)
Q Consensus 48 ~~~~las~~~-----d-~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~----------~dg~i~ 111 (394)
+++.++.... + .|.++|..+++.+..+..- ..+ .++++ |||+ +++++. .++.|.
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-----~~P--~va~s--pDG~-~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-----FLP--NPVVA--DDGS-FIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-----SSC--EEEEC--TTSS-CEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-----CCC--cEEEC--CCCC-EEEEEcccccccccCCCCCEEE
Confidence 4555555433 3 4999999999998888732 223 26666 9999 666554 367899
Q ss_pred EEECCCCeeEEEEEecC-------CceeEEEEcCCCCcEEEEce--eeeEEeeccceeeeeeeccceeeeccCCcEEEEE
Q 016185 112 VIDVSNEKLHKSFVGHG-------DSINEIRTQPLKPSLVVSAS--KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWN 182 (394)
Q Consensus 112 vwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~s~~--~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd 182 (394)
+||..+.+.+.++.-.. .....+.|+| ++++++.+. . ++.|.++|
T Consensus 113 viD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~-------------------------~~~VsVID 166 (386)
T 3sjl_D 113 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSP-------------------------APAVGVVD 166 (386)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSS-------------------------SCEEEEEE
T ss_pred EEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCC-------------------------CCeEEEEE
Confidence 99999999998886432 2456799999 556555543 3 57899999
Q ss_pred ecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccc-cceeeccccccCCCCCCCCccccccceeee
Q 016185 183 VQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE-FWTYVEKSFTWTDLPSKFPTKYVQFPVFIA 261 (394)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (394)
+.+++.+..+.. .+. ...+ |.....+++.+.||++.+.++.. ++...... . .+
T Consensus 167 ~~t~~vv~tI~v----~g~--~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~----~---------------~~ 220 (386)
T 3sjl_D 167 LEGKAFKRMLDV----PDC--YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT----E---------------VF 220 (386)
T ss_dssp TTTTEEEEEEEC----CSE--EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEEC----C---------------CC
T ss_pred CCCCcEEEEEEC----CCc--ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeec----c---------------ee
Confidence 999999998862 111 1223 42455677888899999999876 33211000 0 00
Q ss_pred ecCCCceE-EEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccccc----------CCCCCeEEEEEeecCC
Q 016185 262 SVHSNYVD-CNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP----------VPECDIWFIKFSCDFH 327 (394)
Q Consensus 262 ~~~~~~i~-~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~ 327 (394)
......+. ...|. |++++ .+.+|++.+.|+.+.... .+.++. ........++++++++
T Consensus 221 ~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~-------v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~ 292 (386)
T 3sjl_D 221 HPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAK-------FLPAVEALTEAERADGWRPGGWQQVAYHRALD 292 (386)
T ss_dssp SCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCE-------ECCCEESSCHHHHHTTEEECSSSCEEEETTTT
T ss_pred ccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcce-------eecceeccccccccccccCCCcceeeECCCCC
Confidence 00001111 12332 44444 455899999999765321 111111 0112233467788885
Q ss_pred cceEEEEeC----------CCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC-EEEEe-ccCCeEEEEEcCC
Q 016185 328 YNAAAIGNR----------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSC-CEDGAIWRWDAIP 393 (394)
Q Consensus 328 ~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~-~~dg~i~iwd~~~ 393 (394)
.++.... .+.|.++|+.+.+ .+.++... ..+.+|++++|++ +|+++ ..++.|.++|..+
T Consensus 293 --~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--v~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 293 --RIYLLVDQRDEWRHKTASRFVVVLDAKTGE--RLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp --EEEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred --eEEEEeccccccccCCCCCEEEEEECCCCe--EEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 3444321 2578999998885 45555522 4688999999996 66664 5589999999875
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=8.4e-12 Score=106.09 Aligned_cols=247 Identities=9% Similarity=-0.005 Sum_probs=154.6
Q ss_pred CccceeEEEEEeeCCCcceEEEE-------ecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCC-CCcEEE
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFAT-------VGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVD-GIPFLV 102 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las-------~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~l~ 102 (394)
.-....+++|++ ++.++++ ...++ |.+||..+++.. .+.......+...+..+++. ++ |+ +++
T Consensus 16 ~~~~~~~~~~~~----~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~--~~~g~-l~v 87 (314)
T 1pjx_A 16 DIPGAEGPVFDK----NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCD--RDANQ-LFV 87 (314)
T ss_dssp CCTTCEEEEECT----TSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEEC--SSSSE-EEE
T ss_pred cCCCccCceECC----CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEe--cCCCc-EEE
Confidence 344678999997 6888887 44444 999998777653 22210001133456667665 88 65 444
Q ss_pred EeecCCeEEEEECCCCeeEEE-EEe----cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC--
Q 016185 103 AGGINGIIRVIDVSNEKLHKS-FVG----HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD-- 175 (394)
Q Consensus 103 s~~~dg~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d-- 175 (394)
+ ...+.|.+||.+ ++.... ... ....+.++++.+ +++++++... +
T Consensus 88 ~-~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~-------------------------~~~ 139 (314)
T 1pjx_A 88 A-DMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPA-------------------------GEV 139 (314)
T ss_dssp E-ETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECB-------------------------CBC
T ss_pred E-ECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecC-------------------------ccc
Confidence 4 444579999987 654332 211 123578999999 6677776654 3
Q ss_pred -------------CcEEEEEecCCcEEEEeeccCCCcccEEEEEec----CCCCeeE-EeeccCCcEEEEEccc-cceee
Q 016185 176 -------------ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH----PSDIYRI-ASCGMDNTVKIWSMKE-FWTYV 236 (394)
Q Consensus 176 -------------~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~l-~s~~~dg~v~iwd~~~-~~~~~ 236 (394)
+.|..||.. ++...... +......++++ | +++.+ ++...++.|.+||+.. +....
T Consensus 140 ~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~----~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 140 APADYTRSMQEKFGSIYCFTTD-GQMIQVDT----AFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp TTSCCCBTTSSSCEEEEEECTT-SCEEEEEE----EESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred ccccccccccCCCCeEEEECCC-CCEEEecc----CCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 456666655 55443332 34456889999 9 77544 5556788999999862 21100
Q ss_pred ccccccCCCCCCCCccccccceeeeecCC-CceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHS-NYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP 313 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 313 (394)
......+..+. .....++++ |++.++...++.|.+||.++++ .+..+..+
T Consensus 214 ------------------~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~---------~~~~~~~~ 266 (314)
T 1pjx_A 214 ------------------KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ---------PKMRIRCP 266 (314)
T ss_dssp ------------------EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS---------CSEEEECS
T ss_pred ------------------ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc---------EeEEEeCC
Confidence 00112223333 456778887 6677777778999999988554 23334445
Q ss_pred CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 314 ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 314 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
...+.+++|+|+++ .++++...++.|..|++...
T Consensus 267 ~~~~~~i~~~~dg~-~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 267 FEKPSNLHFKPQTK-TIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTTTEEEEEECSSC
T ss_pred CCCceeEEECCCCC-EEEEEeCCCCeEEEEeCCCC
Confidence 56789999999983 24455556788999998753
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=5.8e-12 Score=107.11 Aligned_cols=241 Identities=11% Similarity=0.065 Sum_probs=152.5
Q ss_pred eEEEEEEEcCCCCcEEEE-------eecCCeEEEEECCCCeeEEEEEe-----cCCceeEEEEcCCCCcEEEEceeeeEE
Q 016185 86 FYTVSWACNVDGIPFLVA-------GGINGIIRVIDVSNEKLHKSFVG-----HGDSINEIRTQPLKPSLVVSASKVIII 153 (394)
Q Consensus 86 v~~~~~~~~~~~~~~l~s-------~~~dg~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~~i~~ 153 (394)
...++|. ++|. ++++ +..++.|.+||..+++... +.. +...+.+++++++++.++++..
T Consensus 20 ~~~~~~~--~~g~-l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~----- 90 (314)
T 1pjx_A 20 AEGPVFD--KNGD-FYIVAPEVEVNGKPAGEILRIDLKTGKKTV-ICKPEVNGYGGIPAGCQCDRDANQLFVADM----- 90 (314)
T ss_dssp CEEEEEC--TTSC-EEEEETTCEETTEECCEEEEECTTTCCEEE-EECCEETTEECCEEEEEECSSSSEEEEEET-----
T ss_pred ccCceEC--CCCC-EEEEEeccccCCCCCCEEEEEeCCCCcEEE-EEecccCCCCCCCceEEEecCCCcEEEEEC-----
Confidence 3567776 8887 7777 6778999999987776543 322 4456889999993266665554
Q ss_pred eeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE-eeccC-CCcccEEEEEecCCCCeeEEeeccC----------
Q 016185 154 SSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI-FAGAG-GHRNEVLSVDFHPSDIYRIASCGMD---------- 221 (394)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~d---------- 221 (394)
...|.+||.. ++.... ..... .....+.++++++ +++++++...+
T Consensus 91 ---------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 91 ---------------------RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp ---------------------TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBT
T ss_pred ---------------------CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCccccccccccc
Confidence 4478899987 665433 22110 1224588999999 88877776554
Q ss_pred -----CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe------CcEEE-EeecCCeEEE
Q 016185 222 -----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL------GDFIL-SKSVDNEIVL 289 (394)
Q Consensus 222 -----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~l~-~~~~dg~i~~ 289 (394)
+.|..||... + ......+......++++ ++.++ +...++.|.+
T Consensus 148 ~~~~~~~l~~~~~~g-~------------------------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~ 202 (314)
T 1pjx_A 148 MQEKFGSIYCFTTDG-Q------------------------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWS 202 (314)
T ss_dssp TSSSCEEEEEECTTS-C------------------------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEE
T ss_pred ccCCCCeEEEECCCC-C------------------------EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEE
Confidence 4566666542 1 11111122334556665 33444 4456889999
Q ss_pred ecCC-CCCCCCCCCcceecccccCCC-CCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeE
Q 016185 290 WEPK-MKEQSPGEGTADILQKYPVPE-CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQ 367 (394)
Q Consensus 290 ~d~~-~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 367 (394)
||.. .++. ........+..+. .....+++++++ .++++...++.|.+||..+++ ....+. .+...+.+
T Consensus 203 ~~~~~~g~~----~~~~~~~~~~~~~~~~p~~i~~d~~G--~l~v~~~~~~~i~~~d~~~g~--~~~~~~--~~~~~~~~ 272 (314)
T 1pjx_A 203 YDIKGPAKI----ENKKVWGHIPGTHEGGADGMDFDEDN--NLLVANWGSSHIEVFGPDGGQ--PKMRIR--CPFEKPSN 272 (314)
T ss_dssp EEEEETTEE----EEEEEEEECCCCSSCEEEEEEEBTTC--CEEEEEETTTEEEEECTTCBS--CSEEEE--CSSSCEEE
T ss_pred EECCCCCcc----ccceEEEECCCCCCCCCCceEECCCC--CEEEEEcCCCEEEEEcCCCCc--EeEEEe--CCCCCcee
Confidence 9976 2210 0011222333333 457789999988 566666678899999987553 233444 34467999
Q ss_pred EEeccCCCEE-EEeccCCeEEEEEcCC
Q 016185 368 TAMSYDGSTI-LSCCEDGAIWRWDAIP 393 (394)
Q Consensus 368 ~~~s~~~~~l-~s~~~dg~i~iwd~~~ 393 (394)
++|+|+++.| ++...++.|..|++..
T Consensus 273 i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 273 LHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999999944 5556678999999764
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.54 E-value=7.2e-13 Score=126.17 Aligned_cols=248 Identities=9% Similarity=-0.044 Sum_probs=151.0
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecCC-----c-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEe
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGGN-----R-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAG 104 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~d-----~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~ 104 (394)
+|...+..++||| ||++||.+..+ . |++||+.+++.+.... +...+..++|+ || + .|+.+
T Consensus 160 ~~~~~~~~~~~SP----DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~------~~~~~~~~~ws--pD-~-~l~~~ 225 (741)
T 1yr2_A 160 DGATALDAWAASD----DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL------KWVKFSGLAWL--GN-D-ALLYS 225 (741)
T ss_dssp ---EEEEEEEECT----TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE------EEEESCCCEES--TT-S-EEEEE
T ss_pred CCCEEEEeEEECC----CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC------CCceeccEEEE--CC-C-EEEEE
Confidence 3445788999999 78888877543 3 9999999988654311 11123456777 88 7 66666
Q ss_pred ecCC--------------eEEEEECCCCee--EEEEEe--cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeec
Q 016185 105 GING--------------IIRVIDVSNEKL--HKSFVG--HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIR 166 (394)
Q Consensus 105 ~~dg--------------~i~vwd~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~ 166 (394)
..++ .|++|++.++.. ...+.. +...+..+.|+| +++.|+..+. ..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~---------------~~ 289 (741)
T 1yr2_A 226 RFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSS---------------EG 289 (741)
T ss_dssp ECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEE---------------CT
T ss_pred EecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEE---------------cc
Confidence 6544 389999877652 222332 223588999999 6666666554 00
Q ss_pred cceeeeccCCcEEEEEecCC--cEEEEeeccCCCcccEEEEEecCCCCeeEEeecc----CCcEEEEEccccceeecccc
Q 016185 167 SNCLRVGQDESVRLWNVQTG--ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM----DNTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 167 ~~~~~~~~d~~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~----dg~v~iwd~~~~~~~~~~~~ 240 (394)
......|.+||+.++ +....+. .+...+....+ | ++..|+..+. ++.|.+||+.++.
T Consensus 290 -----~~~~~~l~~~d~~~~~~~~~~~l~---~~~~~~~~~~~-~-dg~~l~~~s~~~~~~~~l~~~d~~~~~------- 352 (741)
T 1yr2_A 290 -----TDPVNTVHVARVTNGKIGPVTALI---PDLKAQWDFVD-G-VGDQLWFVSGDGAPLKKIVRVDLSGST------- 352 (741)
T ss_dssp -----TCSCCEEEEEEEETTEECCCEEEE---CSSSSCEEEEE-E-ETTEEEEEECTTCTTCEEEEEECSSSS-------
T ss_pred -----CCCcceEEEEECCCCCCcccEEec---CCCCceEEEEe-c-cCCEEEEEECCCCCCCEEEEEeCCCCc-------
Confidence 000338999999877 4134444 34444444433 6 6666666554 3459999987621
Q ss_pred ccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCC-CCCCCCCCcceecccccCC-CCCe
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKM-KEQSPGEGTADILQKYPVP-ECDI 317 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~-~~~i 317 (394)
......+..+...+..+.+. +.++++...|+..++|.+.. ++ ....+..+ ...+
T Consensus 353 --------------~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~---------~~~~l~~~~~~~v 409 (741)
T 1yr2_A 353 --------------PRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGK---------PAGAVSLPGIGSA 409 (741)
T ss_dssp --------------CEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSC---------EEEECBCSSSCEE
T ss_pred --------------cccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC---------ceeeccCCCCeEE
Confidence 00112233444556677777 55777888888877775542 22 23334332 4567
Q ss_pred EEEEEeecCCcceEEEEe---CCCcEEEEEecCCC
Q 016185 318 WFIKFSCDFHYNAAAIGN---REGKIFVWELQSSP 349 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~ 349 (394)
..+.++|++. .++++.+ ..++|++||+.+++
T Consensus 410 ~~~~~s~d~~-~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 410 SGLSGRPGDR-HAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEECCBTCS-CEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEeecCCCCC-EEEEEEcCCCCCCEEEEEECCCCc
Confidence 8889999885 2333322 35789999998764
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=1.4e-10 Score=97.68 Aligned_cols=235 Identities=10% Similarity=0.045 Sum_probs=145.6
Q ss_pred eccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC
Q 016185 29 LQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN 107 (394)
Q Consensus 29 ~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d 107 (394)
+..+..--.+..|+|+ ++.++++...++ |..||..++.. ..+. ....+.++++. ++|+ ++++. +
T Consensus 8 ~~~~~~~~Egp~w~~~---~~~l~~~d~~~~~i~~~d~~~~~~-~~~~------~~~~~~~i~~~--~dG~-l~v~~--~ 72 (297)
T 3g4e_A 8 LPENCRCGESPVWEEV---SNSLLFVDIPAKKVCRWDSFTKQV-QRVT------MDAPVSSVALR--QSGG-YVATI--G 72 (297)
T ss_dssp ECCCCSBEEEEEEETT---TTEEEEEETTTTEEEEEETTTCCE-EEEE------CSSCEEEEEEB--TTSS-EEEEE--T
T ss_pred eccCCccccCCeEECC---CCEEEEEECCCCEEEEEECCCCcE-EEEe------CCCceEEEEEC--CCCC-EEEEE--C
Confidence 3444555678899982 466777776665 99999887654 3332 23467777776 9998 55543 5
Q ss_pred CeEEEEECCCCeeEEEEEec----CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEe
Q 016185 108 GIIRVIDVSNEKLHKSFVGH----GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183 (394)
Q Consensus 108 g~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~ 183 (394)
+.|.+||.++++........ ...+++++++| +++++++... ............-.+|.+
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~----------------~~~~~~~~~~~~~~l~~~ 135 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMA----------------EETAPAVLERHQGALYSL 135 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEE----------------CCSBTTBCCTTCEEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCC----------------cccccccccCCCcEEEEE
Confidence 68999999887654333221 23578899999 6666665432 000000000123455555
Q ss_pred cC-CcEEEEeeccCCCcccEEEEEecCCCCee-EEeeccCCcEEEEEcc--ccceeeccccccCCCCCCCCcccccccee
Q 016185 184 QT-GICILIFAGAGGHRNEVLSVDFHPSDIYR-IASCGMDNTVKIWSMK--EFWTYVEKSFTWTDLPSKFPTKYVQFPVF 259 (394)
Q Consensus 184 ~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-l~s~~~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (394)
.. ++...... .....+.++|+| +++. +++.+.++.|..||+. ++.... .....
T Consensus 136 d~~g~~~~~~~----~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~------------------~~~~~ 192 (297)
T 3g4e_A 136 FPDHHVKKYFD----QVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISN------------------RRSVY 192 (297)
T ss_dssp CTTSCEEEEEE----EESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEE------------------EEEEE
T ss_pred ECCCCEEEEee----ccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccC------------------cEEEE
Confidence 43 33333222 445568999999 7764 4666778899999974 321100 11122
Q ss_pred eeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEe-ecCC
Q 016185 260 IASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS-CDFH 327 (394)
Q Consensus 260 ~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 327 (394)
.+..+......++++ |++.++...++.|..||..+++ .+..+..+...+++++|. |+++
T Consensus 193 ~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~---------~~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 193 KLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK---------RLQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp ECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC---------EEEEEECSSSBEEEEEEESGGGC
T ss_pred ECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce---------EEEEEECCCCCceEEEEeCCCCC
Confidence 223334567788887 6677776778899999998775 556666666679999998 8875
No 205
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.54 E-value=4.4e-12 Score=110.60 Aligned_cols=267 Identities=9% Similarity=0.002 Sum_probs=164.3
Q ss_pred cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee----------cCCeEEEEECCCCeeEEEEEec-
Q 016185 59 RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH- 127 (394)
Q Consensus 59 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~- 127 (394)
.|.++|..+++.+..+..- ..+ .++++ |||+ +|+++. .++.|.++|..+++.+.++.-.
T Consensus 100 ~VsVID~~t~~vv~~I~vG-----~~P--gia~S--pDgk-~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g 169 (426)
T 3c75_H 100 QQFVIDGSTGRILGMTDGG-----FLP--HPVAA--EDGS-FFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPD 169 (426)
T ss_dssp EEEEEETTTTEEEEEEEEC-----SSC--EEEEC--TTSS-CEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEECCCCEEEEEEECC-----CCC--ceEEC--CCCC-EEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCC
Confidence 4999999999998888742 223 46666 9999 666654 4678999999999998888642
Q ss_pred ------CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCccc
Q 016185 128 ------GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNE 201 (394)
Q Consensus 128 ------~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 201 (394)
......+.|+| ++++++.+.. ..++.|.+.|+.+++.+..+.. ...
T Consensus 170 ~~r~~~g~~P~~~~~sp-DGk~lyV~n~-----------------------~~~~~VsVID~~t~kvv~~I~v----~g~ 221 (426)
T 3c75_H 170 APRFLVGTYQWMNALTP-DNKNLLFYQF-----------------------SPAPAVGVVDLEGKTFDRMLDV----PDC 221 (426)
T ss_dssp CCCCCBSCCGGGSEECT-TSSEEEEEEC-----------------------SSSCEEEEEETTTTEEEEEEEC----CSE
T ss_pred ccccccCCCcceEEEcC-CCCEEEEEec-----------------------CCCCeEEEEECCCCeEEEEEEc----CCc
Confidence 23456789999 6666666542 0057899999999999888873 111
Q ss_pred EEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCce-EEEEEe--CcEE
Q 016185 202 VLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV-DCNRWL--GDFI 278 (394)
Q Consensus 202 i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~--~~~l 278 (394)
....|.....+++.+.||++.+.+..+++...... ..+.....++ ..+.+. ++.+
T Consensus 222 ---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~-------------------~~~~v~~~p~~~~~~~~~dg~~~ 279 (426)
T 3c75_H 222 ---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT-------------------EVFHTEDELLINHPAFSLRSGRL 279 (426)
T ss_dssp ---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC-------------------CCCSCTTSCBCSCCEECTTTCEE
T ss_pred ---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee-------------------eeeccCCCceeeEeeecCCCCEE
Confidence 23334233566777788888888884432211000 0000000000 012222 4555
Q ss_pred EEeecCCeEEEecCCCCCCCCCCCcceec--cc--ccCCCCCeEEEEEeecCCcceEEEEe----------CCCcEEEEE
Q 016185 279 LSKSVDNEIVLWEPKMKEQSPGEGTADIL--QK--YPVPECDIWFIKFSCDFHYNAAAIGN----------REGKIFVWE 344 (394)
Q Consensus 279 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~--~~--~~~~~~~i~~~~~~~~~~~~~l~~~~----------~dg~i~iwd 344 (394)
+.....+.+.+.|.......... ..... .. ..........++++|++. .+++.. .++.|.++|
T Consensus 280 ~~~s~~g~V~ViD~~~~~~~v~~-~~~~~~~~~i~~g~~p~g~~~va~s~dg~--rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 280 VWPTYTGKIFQADLTAEGATFRA-PIEALTEAERADDWRPGGWQQTAYHRQSD--RIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp EEEBTTSEEEEEEECSSCEEECC-CEESSCTTTGGGTEEECSSSCEEEEGGGT--EEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred EEEeCCCcEEEEeccCCceEEee-eeeeccccccccccccCCceeeEEcCCCC--EEEEEecccccccccCCCCEEEEEE
Confidence 55566789999998654310000 00000 00 000011122368999985 333332 135799999
Q ss_pred ecCCCceeeEEeccCCccCCeeEEEeccCCC-EEEEec-cCCeEEEEEcCC
Q 016185 345 LQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSCC-EDGAIWRWDAIP 393 (394)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~ 393 (394)
..+.+ .+.++... .....++|+|||+ +|+++. .++.|.|+|+.+
T Consensus 357 ~~T~k--vv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 357 AETGE--RINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp TTTCC--EEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred CCCCe--EEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 99885 55555522 3588999999999 888887 599999999875
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=1.1e-12 Score=112.74 Aligned_cols=149 Identities=10% Similarity=0.097 Sum_probs=113.3
Q ss_pred ceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEE-----eeecccCCcccceEEEEEEEcCCCCcEEEEeecCCe
Q 016185 35 PLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAA-----LQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGI 109 (394)
Q Consensus 35 ~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~ 109 (394)
+++.+++++ ...++++|+.+++++|++...+.... ++......+.. |+.++| ++. +|+++ .++.
T Consensus 39 ~~nlLais~----~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f----d~~-~L~v~-~~~~ 107 (388)
T 1xip_A 39 SLQNLDISN----SKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF----HGD-QVLVS-TRNA 107 (388)
T ss_dssp CCBCEEEET----TTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE----ETT-EEEEE-ESSE
T ss_pred cccEEEEcC----CCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE----CCC-EEEEE-cCCc
Confidence 699999998 67889999999998999765431000 11000002344 888887 677 88888 8899
Q ss_pred EEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEE
Q 016185 110 IRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICI 189 (394)
Q Consensus 110 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 189 (394)
|++||+.+.........|...+.++.+.+ . + ++.+.. ||.|.+||+.+++..
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~-p-~-~av~~~-------------------------dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVN-N-T-LVILNS-------------------------VNDLSALDLRTKSTK 159 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECS-S-E-EEEEET-------------------------TSEEEEEETTTCCEE
T ss_pred EEEEEchhhhccCccceeecceeeEEecC-C-C-EEEEEC-------------------------CCCEEEEEccCCccc
Confidence 99999988776667778888898888876 2 2 777777 999999999987764
Q ss_pred EEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEcccc
Q 016185 190 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEF 232 (394)
Q Consensus 190 ~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 232 (394)
. +...|+|++|+| +| ++.|..||++++|+....
T Consensus 160 ~-------~~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 160 Q-------LAQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp E-------EEESEEEEEECS-SE--EEEEETTSCEEEEEEETT
T ss_pred c-------ccCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCc
Confidence 3 346899999999 77 678889999999988773
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=1.2e-11 Score=108.89 Aligned_cols=259 Identities=10% Similarity=-0.039 Sum_probs=155.6
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCC--eE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGING--II 110 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg--~i 110 (394)
.....|+|+| +++++++...++ |++||..++........ .. ... ++|. ++++ .|+++..++ .|
T Consensus 131 ~~P~~la~d~----~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-----~~-~~~-ia~~--~~g~-~l~~~d~~~~~~I 196 (409)
T 3hrp_A 131 KYMWGIAAVG----NNTVLAYQRDDPRVRLISVDDNKVTTVHPG-----FK-GGK-PAVT--KDKQ-RVYSIGWEGTHTV 196 (409)
T ss_dssp CCEEEEEECS----TTEEEEEETTTTEEEEEETTTTEEEEEEET-----CC-BCB-CEEC--TTSS-EEEEEBSSTTCEE
T ss_pred CCceEEEEeC----CCCEEEEecCCCcEEEEECCCCEEEEeecc-----CC-CCc-eeEe--cCCC-cEEEEecCCCceE
Confidence 3578899998 788888877666 99999877765444332 11 122 6666 9998 787777755 79
Q ss_pred EEEECCCCeeEEEE----EecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 111 RVIDVSNEKLHKSF----VGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 111 ~vwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
.+|+...+.....+ ......+.+++++|+++.+++ +.. ++.|+.||..++
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~-------------------------~~~I~~~d~~~~ 250 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDS-------------------------NKNFGRFNVKTQ 250 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECT-------------------------TCEEEEEETTTC
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EEC-------------------------CCcEEEEECCCC
Confidence 99997765544444 113456788999995555555 555 789999999877
Q ss_pred cEEEEeec--cCCCccc--EEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee
Q 016185 187 ICILIFAG--AGGHRNE--VLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 262 (394)
Q Consensus 187 ~~~~~~~~--~~~~~~~--i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (394)
.... +.. ..++... ...++|+|.++.++++-..++.|+.|+............ .... .. . -....
T Consensus 251 ~~~~-~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~---~~~g-~~----d--g~~~~ 319 (409)
T 3hrp_A 251 EVTL-IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSA---TQKT-VQ----D--GLREE 319 (409)
T ss_dssp CEEE-EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECT---TCCS-CB----C--EEGGG
T ss_pred CEEE-EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCC---CCCC-cC----C--Ccccc
Confidence 6432 210 0012221 138999995577777778889999998765211000000 0000 00 0 00000
Q ss_pred cCCCceEEEEEe--CcEEEEee-cCCeEEEecCCCCCCCCCCCccee---c--ccccCCCCCeEEEEEeecCCcceEEEE
Q 016185 263 VHSNYVDCNRWL--GDFILSKS-VDNEIVLWEPKMKEQSPGEGTADI---L--QKYPVPECDIWFIKFSCDFHYNAAAIG 334 (394)
Q Consensus 263 ~~~~~i~~~~~~--~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~---~--~~~~~~~~~i~~~~~~~~~~~~~l~~~ 334 (394)
..-.....++++ |+++++-. .++.|+.||+.+++.....+.... . ......-.....+++++++ .++++-
T Consensus 320 ~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g--~lyVad 397 (409)
T 3hrp_A 320 ALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG--GYWIAE 397 (409)
T ss_dssp CBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS--EEEEEE
T ss_pred cEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC--CEEEEE
Confidence 112346778887 67777777 789999999766531100000000 0 0000012357889999997 677777
Q ss_pred eCCCcEEEEEe
Q 016185 335 NREGKIFVWEL 345 (394)
Q Consensus 335 ~~dg~i~iwd~ 345 (394)
..++.|+.+++
T Consensus 398 ~~n~~Ir~i~~ 408 (409)
T 3hrp_A 398 AWGKAIRKYAV 408 (409)
T ss_dssp STTCEEEEEEE
T ss_pred CCCCeEEEEEe
Confidence 78888888775
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=1.8e-11 Score=107.60 Aligned_cols=251 Identities=10% Similarity=0.019 Sum_probs=156.1
Q ss_pred ceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeee
Q 016185 85 SFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 85 ~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~ 164 (394)
....++|. ++|+ ++++...++.|++||..+++....... ..... ++|++ ++..|+.+..
T Consensus 132 ~P~~la~d--~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~--------------- 190 (409)
T 3hrp_A 132 YMWGIAAV--GNNT-VLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGW--------------- 190 (409)
T ss_dssp CEEEEEEC--STTE-EEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECT-TSSEEEEEBS---------------
T ss_pred CceEEEEe--CCCC-EEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEec-CCCcEEEEec---------------
Confidence 44566666 8998 777777889999999987766555443 33344 99999 5666666655
Q ss_pred eccceeeeccCC--cEEEEEecCCcEEEEeeccCC-CcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccc
Q 016185 165 IRSNCLRVGQDE--SVRLWNVQTGICILIFAGAGG-HRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 241 (394)
Q Consensus 165 ~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 241 (394)
++ .|.+++...+.....+..... ....+.+++++|.++. |+.+..++.|+.||..+.........
T Consensus 191 ----------~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~- 258 (409)
T 3hrp_A 191 ----------EGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQL- 258 (409)
T ss_dssp ----------STTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTTCCEEEEEEC-
T ss_pred ----------CCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCCCCEEEEecc-
Confidence 55 788888876655444411112 4466788999994455 55567788999999987431110000
Q ss_pred cCCCCCCCCccccccceeeeecCCCce--EEEEEe---CcEEEEeecCCeEEEecCCCCCCCC-----CCCcceeccccc
Q 016185 242 WTDLPSKFPTKYVQFPVFIASVHSNYV--DCNRWL---GDFILSKSVDNEIVLWEPKMKEQSP-----GEGTADILQKYP 311 (394)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~-----~~~~~~~~~~~~ 311 (394)
....+...- ..++++ +.++++-..++.|+.|+........ ..+...- ....
T Consensus 259 ------------------~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg-~~~~ 319 (409)
T 3hrp_A 259 ------------------ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDG-LREE 319 (409)
T ss_dssp ------------------CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCE-EGGG
T ss_pred ------------------cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCC-cccc
Confidence 011111111 277776 3455666678899999976431000 0000000 0000
Q ss_pred CCCCCeEEEEEeecCCcceEEEEe-CCCcEEEEEecCCCceeeEEeccC-------------CccCCeeEEEeccCCCEE
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQSSPPVLIARLSHA-------------QSKSPIRQTAMSYDGSTI 377 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~-------------~~~~~v~~~~~s~~~~~l 377 (394)
..-.....+++++++ .++++-. .++.|+.|++.++. +..+... ..-..+..+++++++.++
T Consensus 320 ~~~~~P~gia~d~dG--~lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~ly 394 (409)
T 3hrp_A 320 ALFAQPNGMTVDEDG--NFYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYW 394 (409)
T ss_dssp CBCSSEEEEEECTTC--CEEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEE
T ss_pred cEeCCCeEEEEeCCC--CEEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEE
Confidence 112346889999998 5677777 78999999977663 2333210 012468899999998888
Q ss_pred EEeccCCeEEEEEcC
Q 016185 378 LSCCEDGAIWRWDAI 392 (394)
Q Consensus 378 ~s~~~dg~i~iwd~~ 392 (394)
++-..++.|+.++++
T Consensus 395 Vad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 395 IAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEESTTCEEEEEEEC
T ss_pred EEECCCCeEEEEEeC
Confidence 888889999988764
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.52 E-value=1.1e-10 Score=98.47 Aligned_cols=238 Identities=7% Similarity=-0.062 Sum_probs=158.5
Q ss_pred ccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEE-EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceee
Q 016185 83 EESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS-FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICL 161 (394)
Q Consensus 83 ~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~ 161 (394)
.....++++. ++|. +.++...++.|.+||.. ++.... +..+...+..+++.+ ++.++++...
T Consensus 19 ~~~p~~i~~d--~~g~-l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~------------ 81 (300)
T 2qc5_A 19 DSGPYGITSS--EDGK-VWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENG------------ 81 (300)
T ss_dssp TCCEEEEEEC--TTSC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETT------------
T ss_pred CCCcceeeEC--CCCC-EEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecC------------
Confidence 3455666665 8898 66666678999999987 554331 122335788999998 6677777665
Q ss_pred eeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccc
Q 016185 162 LLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFT 241 (394)
Q Consensus 162 ~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 241 (394)
++.|..+|.. ++.. .+... .....+.++++++ ++.++++...++.|..+|... +.
T Consensus 82 -------------~~~v~~~d~~-g~~~-~~~~~-~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g-~~------- 136 (300)
T 2qc5_A 82 -------------ANKIGKLSKK-GGFT-EYPLP-QPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADG-TI------- 136 (300)
T ss_dssp -------------TTEEEEECTT-SCEE-EEECS-STTCCEEEEEECS-TTCEEEEETTTTEEEEECTTS-CE-------
T ss_pred -------------CCeEEEECCC-CCeE-EecCC-CCCCCCccceECC-CCCEEEEccCCCeEEEECCCC-CE-------
Confidence 7889999987 5543 33211 2346789999998 888888777788899998763 21
Q ss_pred cCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEE
Q 016185 242 WTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF 319 (394)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 319 (394)
...........+.++.++ +++.++...++.|..||. +++. ...........+..
T Consensus 137 ---------------~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~--------~~~~~~~~~~~~~~ 192 (300)
T 2qc5_A 137 ---------------YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL--------EEYPLPTNAAAPVG 192 (300)
T ss_dssp ---------------EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--------EEEECSSTTCCEEE
T ss_pred ---------------EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE--------EEeeCCCCCCCcce
Confidence 011112233456777776 666666666789999998 4331 11112233456788
Q ss_pred EEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 320 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 320 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
+++.+++ .++++....+.|.+||. +++ .....+. .+...+.+++++++|+++++...++.|..||..
T Consensus 193 i~~d~~g--~l~v~~~~~~~i~~~~~-~g~-~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 193 ITSGNDG--ALWFVEIMGNKIGRITT-TGE-ISEYDIP--TPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEECTTS--SEEEEETTTTEEEEECT-TCC-EEEEECS--STTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEECCCC--CEEEEccCCCEEEEEcC-CCc-EEEEECC--CCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 9999988 45666566778999998 443 1222222 345678999999999987777777899998863
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=1.5e-12 Score=111.94 Aligned_cols=174 Identities=10% Similarity=-0.001 Sum_probs=127.7
Q ss_pred ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCc-----------EEEEeeccCCC
Q 016185 130 SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGI-----------CILIFAGAGGH 198 (394)
Q Consensus 130 ~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~-----------~~~~~~~~~~~ 198 (394)
.++.+++++ ...++++|+. + .+.+|++...+ ...... +
T Consensus 39 ~~nlLais~-~~gll~a~~~-------------------------~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~----l 87 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASG-------------------------S-KAVVGELQLLRDHITSDSTPLTFKWEKE----I 87 (388)
T ss_dssp CCBCEEEET-TTTEEEEEET-------------------------T-EEEEEEHHHHHHHHHSSSCCCCCSEEEE----C
T ss_pred cccEEEEcC-CCCEEEEeCC-------------------------C-EEEEEEhhHhhhhhccccccccceEEee----C
Confidence 688999999 6678888885 5 56669876433 112222 5
Q ss_pred cccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEE
Q 016185 199 RNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 278 (394)
Q Consensus 199 ~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 278 (394)
.. |+.++| ++.+|+++ .++.|++||+++.. .......|...+.++.+....+
T Consensus 88 p~-V~~l~f---d~~~L~v~-~~~~l~v~dv~sl~-----------------------~~~~~~~~~~~v~~i~~~~p~~ 139 (388)
T 1xip_A 88 PD-VIFVCF---HGDQVLVS-TRNALYSLDLEELS-----------------------EFRTVTSFEKPVFQLKNVNNTL 139 (388)
T ss_dssp TT-EEEEEE---ETTEEEEE-ESSEEEEEESSSTT-----------------------CEEEEEECSSCEEEEEECSSEE
T ss_pred CC-eeEEEE---CCCEEEEE-cCCcEEEEEchhhh-----------------------ccCccceeecceeeEEecCCCE
Confidence 56 999999 56778887 88999999999843 1223445566677777775558
Q ss_pred EEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec-
Q 016185 279 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS- 357 (394)
Q Consensus 279 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~- 357 (394)
+++..||.|.+||+.++.. .. +...|++++|+|+| ++.|..||.+++|+....+......+.
T Consensus 140 av~~~dG~L~v~dl~~~~~---------~~----~~~~Vs~v~WSpkG----~~vg~~dg~i~~~~~~~~~~~~k~~I~~ 202 (388)
T 1xip_A 140 VILNSVNDLSALDLRTKST---------KQ----LAQNVTSFDVTNSQ----LAVLLKDRSFQSFAWRNGEMEKQFEFSL 202 (388)
T ss_dssp EEEETTSEEEEEETTTCCE---------EE----EEESEEEEEECSSE----EEEEETTSCEEEEEEETTEEEEEEEECC
T ss_pred EEEECCCCEEEEEccCCcc---------cc----ccCCceEEEEcCCc----eEEEEcCCcEEEEcCCCccccccceecC
Confidence 8889999999999997651 11 23479999999998 577999999999988876421133442
Q ss_pred ------cCCccCCeeEEEeccCCCEEEE
Q 016185 358 ------HAQSKSPIRQTAMSYDGSTILS 379 (394)
Q Consensus 358 ------~~~~~~~v~~~~~s~~~~~l~s 379 (394)
+.+|...|.++.|.+++.+|++
T Consensus 203 Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 203 PSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp CHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CcccccccCCCeeEEEEEEecCCeEEEE
Confidence 1246788999999999999886
No 211
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.46 E-value=3.3e-11 Score=103.21 Aligned_cols=288 Identities=13% Similarity=0.020 Sum_probs=167.3
Q ss_pred cccceeeeeccCccceeEEEEEeeCCCcceEEEEec-----------CCcEEEEEcCCCceeEEeeecccC--CcccceE
Q 016185 21 REYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVG-----------GNRVTVYQCLEGGVIAALQSYVDE--DKEESFY 87 (394)
Q Consensus 21 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~-----------~d~i~vw~~~~~~~~~~~~~~~~~--~~~~~v~ 87 (394)
...+....+.....+ . ++++| +|++++.+. .+.|.+||..+.+.+..+...... .....-.
T Consensus 67 ~t~~v~~~I~vG~~P-~-va~sp----DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~ 140 (386)
T 3sjl_D 67 EAGRVIGMIDGGFLP-N-PVVAD----DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW 140 (386)
T ss_dssp TTTEEEEEEEECSSC-E-EEECT----TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG
T ss_pred CCCeEEEEEECCCCC-c-EEECC----CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc
Confidence 445555666544444 4 99999 677776664 233999999999988887632100 0011222
Q ss_pred EEEEEEcCCCCcEEEEeec--CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeee
Q 016185 88 TVSWACNVDGIPFLVAGGI--NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFI 165 (394)
Q Consensus 88 ~~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~ 165 (394)
.++++ |||+ +|+++.. ++.|.++|+.+++.+.++.... . .. ..|.+...+++.+.
T Consensus 141 ~~a~s--pDGk-~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~-~~P~g~~~~~~~~~---------------- 197 (386)
T 3sjl_D 141 MTSLT--PDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YH-IFPTAPDTFFMHCR---------------- 197 (386)
T ss_dssp GEEEC--TTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EE-EEEEETTEEEEEET----------------
T ss_pred eEEEc--CCCC-EEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ce-eecCCCceeEEECC----------------
Confidence 35555 9999 7776653 6899999999999999886422 1 12 23435566667777
Q ss_pred ccceeeeccCCcEEEEEecC-CcEEEEeecc-CCCcccEE-EEEecCCCCeeEEeeccCCcEEEEEccccceeecccccc
Q 016185 166 RSNCLRVGQDESVRLWNVQT-GICILIFAGA-GGHRNEVL-SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 166 ~~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~-~~~~~~i~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
||.+.+.++.+ ++........ .....++. ...|.+.++++++ .+.+|.|.+.|+.............
T Consensus 198 ---------DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 198 ---------DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp ---------TSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES
T ss_pred ---------CCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceec
Confidence 99999999876 5543222100 01112222 2355422776555 4458999999997632111000000
Q ss_pred CCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec----------CCeEEEecCCCCCCCCCCCcceecccc
Q 016185 243 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV----------DNEIVLWEPKMKEQSPGEGTADILQKY 310 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~----------dg~i~~~d~~~~~~~~~~~~~~~~~~~ 310 (394)
+.. .. + .....+.....++++ ++.++.... .++|.++|+.+.+ .+.++
T Consensus 268 ------~~~---~~-~-~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---------v~~~i 327 (386)
T 3sjl_D 268 ------LTE---AE-R-ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---------RLAKF 327 (386)
T ss_dssp ------SCH---HH-H-HTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEEE
T ss_pred ------ccc---cc-c-cccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---------EEEEE
Confidence 000 00 0 000011222233444 555555432 3579999999887 45554
Q ss_pred cCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccC
Q 016185 311 PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYD 373 (394)
Q Consensus 311 ~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 373 (394)
... ..++.++++++++..++++...++.|.++|..+++ .+.++...+| .+.|.+++|
T Consensus 328 ~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k--~~~~i~~~~~---p~~l~~s~d 384 (386)
T 3sjl_D 328 EMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE--ELRSVNQLGH---GPQVITTAD 384 (386)
T ss_dssp EEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC--EEEEECCCCS---SCCEEEECC
T ss_pred ECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc--EEEEecCCCC---CceeEECCc
Confidence 432 25779999999953234445568999999999884 6677764444 444566665
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.44 E-value=3.6e-10 Score=95.15 Aligned_cols=228 Identities=7% Similarity=0.020 Sum_probs=144.0
Q ss_pred EEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeecc
Q 016185 88 TVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRS 167 (394)
Q Consensus 88 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~ 167 (394)
...|. +++..++++...++.|..||..+++. ..+. ....+.++++++ +++++++ .
T Consensus 17 gp~w~--~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~-dG~l~v~-~------------------- 71 (297)
T 3g4e_A 17 SPVWE--EVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQ-SGGYVAT-I------------------- 71 (297)
T ss_dssp EEEEE--TTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBT-TSSEEEE-E-------------------
T ss_pred CCeEE--CCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECC-CCCEEEE-E-------------------
Confidence 46777 75554777888889999999987654 3333 456799999999 5665444 3
Q ss_pred ceeeeccCCcEEEEEecCCcEEEEeeccC-CCcccEEEEEecCCCCeeEEeeccC---------CcEEEEEccccceeec
Q 016185 168 NCLRVGQDESVRLWNVQTGICILIFAGAG-GHRNEVLSVDFHPSDIYRIASCGMD---------NTVKIWSMKEFWTYVE 237 (394)
Q Consensus 168 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~ 237 (394)
+..|.+||.++++......... .....++.++++| +++++++...+ ..-.+|.+....
T Consensus 72 -------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g---- 139 (297)
T 3g4e_A 72 -------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDH---- 139 (297)
T ss_dssp -------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTS----
T ss_pred -------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCC----
Confidence 5579999998776544333111 1235688999999 88866654221 223455444310
Q ss_pred cccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEE-EEeecCCeEEEecCC--CCCCCCCCCcceecccccC
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFI-LSKSVDNEIVLWEPK--MKEQSPGEGTADILQKYPV 312 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l-~~~~~dg~i~~~d~~--~~~~~~~~~~~~~~~~~~~ 312 (394)
.......+......++|+ ++.+ ++.+.++.|.+||+. ++.. ...+.+..+..
T Consensus 140 -------------------~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~----~~~~~~~~~~~ 196 (297)
T 3g4e_A 140 -------------------HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI----SNRRSVYKLEK 196 (297)
T ss_dssp -------------------CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE----EEEEEEEECCG
T ss_pred -------------------CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc----cCcEEEEECCC
Confidence 111122223345678887 5544 555668899999874 3321 00112223333
Q ss_pred CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEec-cCCCEEEEec
Q 016185 313 PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS-YDGSTILSCC 381 (394)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~ 381 (394)
.......+++.+++ ++.++....+.|..||..+++ .+..+. .+...+++++|. |+++.|..++
T Consensus 197 ~~~~p~g~~~d~~G--~lwva~~~~~~v~~~d~~tG~--~~~~i~--~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 197 EEQIPDGMCIDAEG--KLWVACYNGGRVIRLDPVTGK--RLQTVK--LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp GGCEEEEEEEBTTS--CEEEEEETTTEEEEECTTTCC--EEEEEE--CSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCCCCCeeEECCCC--CEEEEEcCCCEEEEEcCCCce--EEEEEE--CCCCCceEEEEeCCCCCEEEEEc
Confidence 33456789999998 566666677889999998774 455555 344679999998 8887766544
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.44 E-value=4.8e-10 Score=97.22 Aligned_cols=268 Identities=8% Similarity=-0.074 Sum_probs=157.0
Q ss_pred cceeeeeccCccceeEEEEEeeCCCcceEEEEec-----------CCcEEEEEcCCCceeEEeeec-ccC-CcccceEEE
Q 016185 23 YRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVG-----------GNRVTVYQCLEGGVIAALQSY-VDE-DKEESFYTV 89 (394)
Q Consensus 23 ~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~-----------~d~i~vw~~~~~~~~~~~~~~-~~~-~~~~~v~~~ 89 (394)
.++...+.....+ .++|+| +|++++.+. .+.|.+||..+.+.+..+... ... .....-..+
T Consensus 57 ~~~~~~i~~g~~p--~i~~sp----Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~ 130 (373)
T 2mad_H 57 GSILGHVNGGFLP--NPVAAH----SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMN 130 (373)
T ss_pred CeEEEEecCCCCC--CeEECC----CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccce
Confidence 3444555433333 899999 788877775 233999999988877776531 000 001122345
Q ss_pred EEEEcCCCCcEEEEeec--CCeEEEEECCCCeeEEE-EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeec
Q 016185 90 SWACNVDGIPFLVAGGI--NGIIRVIDVSNEKLHKS-FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIR 166 (394)
Q Consensus 90 ~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~ 166 (394)
.|+ |||+ +|+++.. ++.|.++| .+++.+.. +... . ++.+.|.+...+++.+.
T Consensus 131 ~~s--pDG~-~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~----------------- 185 (373)
T 2mad_H 131 ANT--PNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCA----------------- 185 (373)
T ss_pred EEC--CCCC-EEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcC-----------------
Confidence 555 9999 7777663 58899999 99988877 5532 1 24455655566777777
Q ss_pred cceeeeccCCcEEEEEecCCcEEEEeec--cCCCcccE-EEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccC
Q 016185 167 SNCLRVGQDESVRLWNVQTGICILIFAG--AGGHRNEV-LSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 243 (394)
Q Consensus 167 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~--~~~~~~~i-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 243 (394)
||.+.++|. +++....... ......++ ....+.+.++.++++ +..+.+.+.|+..........+...
T Consensus 186 --------dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~ 255 (373)
T 2mad_H 186 --------QGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDAL 255 (373)
T ss_pred --------CCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeec
Confidence 999999999 8876643220 00011121 234556623343444 4678999999976321110000000
Q ss_pred CCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec----------CCeEEEecCCCCCCCCCCCcceeccccc
Q 016185 244 DLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV----------DNEIVLWEPKMKEQSPGEGTADILQKYP 311 (394)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~----------dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 311 (394)
. . ........+.....+.++ ++.++.+.. ++.|.++|+.+.+ .+.++.
T Consensus 256 ~--~---------~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---------vv~~i~ 315 (373)
T 2mad_H 256 S--G---------GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---------TSSQIS 315 (373)
T ss_pred C--C---------cccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE---------EEEEEE
Confidence 0 0 000000112222334444 555555432 4689999998876 445554
Q ss_pred CCCCCeEEEEEeecCCcceEEEEe-CCCcEEEEEecCCCceeeEE
Q 016185 312 VPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQSSPPVLIAR 355 (394)
Q Consensus 312 ~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~ 355 (394)
... ....++|+|+++. +++++. .++.|.++|+.+++ .+..
T Consensus 316 ~g~-~p~~i~~s~Dg~~-~l~v~~~~~~~V~ViD~~t~~--vv~~ 356 (373)
T 2mad_H 316 LGH-DVDAISVAQDGGP-DLYALSAGTEVLHIYDAGAGD--QDQS 356 (373)
T ss_pred CCC-CcCeEEECCCCCe-EEEEEcCCCCeEEEEECCCCC--EEee
Confidence 332 4689999999952 566666 58999999999885 3444
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=3.8e-11 Score=103.31 Aligned_cols=270 Identities=12% Similarity=0.027 Sum_probs=162.7
Q ss_pred cceeEEEEEeeCCCcceEEEEecC--Cc-EEEEEcCCCceeEEeeec--ccCCcccceEEEEEEEcCCCCcEEEEeec--
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGG--NR-VTVYQCLEGGVIAALQSY--VDEDKEESFYTVSWACNVDGIPFLVAGGI-- 106 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~--d~-i~vw~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~l~s~~~-- 106 (394)
..+..|+++| +|+++++... ++ ++||.+.+++ +..+... ....+-..+..+++. ++|+ +.++-..
T Consensus 17 ~~p~~va~~~----~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d--~~g~-L~v~D~g~~ 88 (343)
T 2qe8_A 17 LAPGNITLTP----DGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSD--GNGI-VWMLDNGNQ 88 (343)
T ss_dssp SCEEEEEECT----TSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEEC--SSSE-EEEEECHHH
T ss_pred CCcceEEECC----CCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEc--CCCc-EEEEcCCCC
Confidence 6789999998 7889988642 22 5666665443 3333211 111234567777766 8887 5554433
Q ss_pred ---CCeEEEEECCCCeeEEEEEec------CCceeEEEEcCCCCcEEEEce---eeeEEeeccceeeeeeeccceeeecc
Q 016185 107 ---NGIIRVIDVSNEKLHKSFVGH------GDSINEIRTQPLKPSLVVSAS---KVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 107 ---dg~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~---~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
++.|.+||+.+++.++.+... ...+..++++++++..+++.. .
T Consensus 89 ~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~------------------------- 143 (343)
T 2qe8_A 89 SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD------------------------- 143 (343)
T ss_dssp HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG-------------------------
T ss_pred cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC-------------------------
Confidence 578999999999887777632 234688999985556666655 5
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEE-EEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVL-SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
++.|.+||+.+++..+.+. +|..... ...+.+ ++..+.+.+.++.++.|..
T Consensus 144 ~~~i~v~d~~~g~~~r~~~---~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~~------------------------ 195 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQ---GYPGIAPEDIDLVI-DGVPVQIGQPDGTVIRPHL------------------------ 195 (343)
T ss_dssp GCEEEEEETTTCCEEEECT---TCTTTSCCSCCCEE-TTEECBEECTTSCEECCCC------------------------
T ss_pred CCeEEEEECCCCCEEEEec---CCCcccccccceeE-CCEEEEeccCCCceeceec------------------------
Confidence 7899999999888766654 3321110 133444 6666766677776654421
Q ss_pred cccceeeeecCCCceEEEEEe--CcEEEEeecCC-eEEEecCCCCCCCCCCCcceecccc--cCCCCCeEEEEEeecCCc
Q 016185 254 VQFPVFIASVHSNYVDCNRWL--GDFILSKSVDN-EIVLWEPKMKEQSPGEGTADILQKY--PVPECDIWFIKFSCDFHY 328 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg-~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~ 328 (394)
.+..|+++ ++.|+.+..++ .+..++........ ....+....+ .++......+++++++
T Consensus 196 -------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~g~~g~pdgia~d~~G-- 259 (343)
T 2qe8_A 196 -------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQ-LTDAELGSKIERYSEKPICDGISIDKDH-- 259 (343)
T ss_dssp -------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTT-CCHHHHHTTCEEEEECCSCSCEEECTTC--
T ss_pred -------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCC-CChhhhhcceEecccCCCCceEEECCCC--
Confidence 23456665 66677666555 55555432111000 0000011111 1122234568899988
Q ss_pred ceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC
Q 016185 329 NAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 383 (394)
Q Consensus 329 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 383 (394)
.++++...++.|.+||..+++. ..+....+...+.+++|.++++++++.+..
T Consensus 260 ~l~va~~~~~~V~~~d~~~G~~---~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 260 NIYVGDLAHSAIGVITSADRAY---KLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp CEEEEEGGGTEEEEEETTTTEE---EEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CEEEEccCCCeEEEEECCCCCE---EEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 6888888899999999845532 222211234578999999999888877643
No 215
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.39 E-value=6.5e-09 Score=90.65 Aligned_cols=260 Identities=11% Similarity=0.040 Sum_probs=151.2
Q ss_pred ceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecC
Q 016185 49 FNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHG 128 (394)
Q Consensus 49 ~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 128 (394)
+.+++....+.|..+|..+|+.+-...... ........ . +. .++.++.++.|..+|..+++.+..+....
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-----~~~~~p~~---~-~~-~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTKVAG-----EALSRPVV---S-DG-LVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECSS-----CCCSCCEE---E-TT-EEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEeCCC-----ceEcCCEE---E-CC-EEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 455554444449999999998765554211 11111111 2 33 68888889999999999999888776432
Q ss_pred Cce-----eEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCc----
Q 016185 129 DSI-----NEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHR---- 199 (394)
Q Consensus 129 ~~v-----~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~---- 199 (394)
... ...... + ..++.+.. ++.+..+|..+|+.+..........
T Consensus 174 ~~~~~~~~~~~~~~--~-~~v~~g~~-------------------------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 225 (376)
T 3q7m_A 174 PSLSLRGESAPTTA--F-GAAVVGGD-------------------------NGRVSAVLMEQGQMIWQQRISQATGSTEI 225 (376)
T ss_dssp -----CCCCCCEEE--T-TEEEECCT-------------------------TTEEEEEETTTCCEEEEEECCC-------
T ss_pred CceeecCCCCcEEE--C-CEEEEEcC-------------------------CCEEEEEECCCCcEEEEEecccCCCCccc
Confidence 211 111111 1 23444444 8999999999999887765210000
Q ss_pred ccEEEEEecC-CCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEE
Q 016185 200 NEVLSVDFHP-SDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 278 (394)
Q Consensus 200 ~~i~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 278 (394)
..+..+...| ..+..++.++.++.+..+|..+++..- ... ......+...++.+
T Consensus 226 ~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w-----------------------~~~--~~~~~~~~~~~~~l 280 (376)
T 3q7m_A 226 DRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMW-----------------------KRE--LGSVNDFIVDGNRI 280 (376)
T ss_dssp ----CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEE-----------------------EEC--CCCEEEEEEETTEE
T ss_pred ccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEe-----------------------ecc--CCCCCCceEECCEE
Confidence 0000011111 023456777789999999998854321 111 12234455568888
Q ss_pred EEeecCCeEEEecCCCCCCCCCCCcceeccccc-CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec
Q 016185 279 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP-VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS 357 (394)
Q Consensus 279 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 357 (394)
+.++.++.+..+|..+++. +.+.. ........... . + ..+++++.+|.|+.+|..+++. +....
T Consensus 281 ~~~~~~g~l~~~d~~tG~~---------~w~~~~~~~~~~~~~~~-~-~--~~l~v~~~~g~l~~~d~~tG~~--~~~~~ 345 (376)
T 3q7m_A 281 YLVDQNDRVMALTIDGGVT---------LWTQSDLLHRLLTSPVL-Y-N--GNLVVGDSEGYLHWINVEDGRF--VAQQK 345 (376)
T ss_dssp EEEETTCCEEEEETTTCCE---------EEEECTTTTSCCCCCEE-E-T--TEEEEECTTSEEEEEETTTCCE--EEEEE
T ss_pred EEEcCCCeEEEEECCCCcE---------EEeecccCCCcccCCEE-E-C--CEEEEEeCCCeEEEEECCCCcE--EEEEe
Confidence 8888999999999998862 22222 11111111222 1 2 3788899999999999999863 33333
Q ss_pred cCCccCCee-EEEeccCCCEEEEeccCCeEEEEE
Q 016185 358 HAQSKSPIR-QTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 358 ~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
. ....+. .... .+..|+.++.+|.|+.|+
T Consensus 346 ~--~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 346 V--DSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp C--CTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred c--CCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 1 112221 1122 256788889999999987
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.38 E-value=4.5e-09 Score=89.63 Aligned_cols=224 Identities=13% Similarity=-0.019 Sum_probs=134.3
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
.-..+.+|+|+ .+.++++...++ |..||..+++. ..+. ....+.++++. ++|+ ++++. . ..|.+
T Consensus 49 ~~~egp~~~~~---~~~l~~~d~~~~~i~~~d~~~~~~-~~~~------~~~~v~~i~~~--~dg~-l~v~~-~-~gl~~ 113 (326)
T 2ghs_A 49 LLGEGPTFDPA---SGTAWWFNILERELHELHLASGRK-TVHA------LPFMGSALAKI--SDSK-QLIAS-D-DGLFL 113 (326)
T ss_dssp SBEEEEEEETT---TTEEEEEEGGGTEEEEEETTTTEE-EEEE------CSSCEEEEEEE--ETTE-EEEEE-T-TEEEE
T ss_pred CCCcCCeEeCC---CCEEEEEECCCCEEEEEECCCCcE-EEEE------CCCcceEEEEe--CCCe-EEEEE-C-CCEEE
Confidence 34577899982 356777766655 99999877653 2332 13467788877 8887 55543 3 45999
Q ss_pred EECCCCeeEEEEEe----cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcE
Q 016185 113 IDVSNEKLHKSFVG----HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGIC 188 (394)
Q Consensus 113 wd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~ 188 (394)
||..+++....... ....+.+++++| +++++++... .. ...+...||.+.+++.
T Consensus 114 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~----------------~~-----~~~~~~~l~~~~~g~~ 171 (326)
T 2ghs_A 114 RDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMG----------------RK-----AETGAGSIYHVAKGKV 171 (326)
T ss_dssp EETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEE----------------TT-----CCTTCEEEEEEETTEE
T ss_pred EECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCC----------------Cc-----CCCCceEEEEEeCCcE
Confidence 99887765432221 123588999999 6666665432 00 0012334444434543
Q ss_pred EEEeeccCCCcccEEEEEecCCCCeeE-EeeccCCcEEEEEcc--cc-ceeeccccccCCCCCCCCccccccceeeeecC
Q 016185 189 ILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMK--EF-WTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH 264 (394)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~~~~~~~l-~s~~~dg~v~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (394)
.. +. ........++|+| +++.+ ++.+.++.|.+||+. ++ .... ......+...
T Consensus 172 ~~-~~---~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~------------------~~~~~~~~~~ 228 (326)
T 2ghs_A 172 TK-LF---ADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGK------------------AEVFIDSTGI 228 (326)
T ss_dssp EE-EE---EEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSC------------------CEEEEECTTS
T ss_pred EE-ee---CCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccC------------------ceEEEECCCC
Confidence 33 32 2334567899999 77655 555667899999986 32 1000 0011112223
Q ss_pred CCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEe-ecCC
Q 016185 265 SNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS-CDFH 327 (394)
Q Consensus 265 ~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~ 327 (394)
......+.++ |.+.++...++.|.+||.. ++ .+..+..+...+++++|+ +++.
T Consensus 229 ~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~---------~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 229 KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN---------HIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp SSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC---------EEEEEECSCSBEEEEEEESTTSC
T ss_pred CCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CC---------EEEEEECCCCCcEEEEEecCCCC
Confidence 3445677776 6666665567899999984 33 344555556678999998 7774
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.38 E-value=4.3e-10 Score=95.10 Aligned_cols=231 Identities=7% Similarity=-0.027 Sum_probs=143.5
Q ss_pred eEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeee
Q 016185 86 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFI 165 (394)
Q Consensus 86 v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~ 165 (394)
.....|. ++|+.+++++..++.|..|+. +++ ...+..+...+..+++++ +++++++...
T Consensus 47 ~egp~~~--~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~---------------- 105 (305)
T 3dr2_A 47 SEGPAWW--EAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHG---------------- 105 (305)
T ss_dssp EEEEEEE--GGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETT----------------
T ss_pred ccCCeEe--CCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECC----------------
Confidence 3457777 888757778888899999997 454 455666677789999999 6677666555
Q ss_pred ccceeeeccCCcEEEEEecCCcEEEEeeccCCC-cccEEEEEecCCCCeeEEe----ecc-------------CCcEEEE
Q 016185 166 RSNCLRVGQDESVRLWNVQTGICILIFAGAGGH-RNEVLSVDFHPSDIYRIAS----CGM-------------DNTVKIW 227 (394)
Q Consensus 166 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~l~s----~~~-------------dg~v~iw 227 (394)
++.|.+|+.. ++.........+. ...+..++++| +++++++ |.. .+.|..|
T Consensus 106 ---------~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 106 ---------RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp ---------TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred ---------CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 6789999975 5543322211011 13467899999 8887776 332 2457777
Q ss_pred EccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecC------CeEEEecCCCCCCCC
Q 016185 228 SMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVD------NEIVLWEPKMKEQSP 299 (394)
Q Consensus 228 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d------g~i~~~d~~~~~~~~ 299 (394)
|..+++ +..+. .......++|+ ++.++.+... +.|.+|++.....
T Consensus 175 d~~~g~------------------------~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l-- 227 (305)
T 3dr2_A 175 PPDGSP------------------------LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL-- 227 (305)
T ss_dssp CSSSCC------------------------CEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE--
T ss_pred cCCCCc------------------------EEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc--
Confidence 765522 11111 23345677887 6666666554 7899999865320
Q ss_pred CCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEE
Q 016185 300 GEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILS 379 (394)
Q Consensus 300 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 379 (394)
......... .......+++.+++ + |.+++.++ |.+|+.... .+..+.. + ..+.+++|+|+++.|..
T Consensus 228 --~~~~~~~~~--~~~~pdgi~~d~~G--~-lwv~~~~g-v~~~~~~g~---~~~~~~~--~-~~~~~~~f~~d~~~L~i 293 (305)
T 3dr2_A 228 --HDRRHFASV--PDGLPDGFCVDRGG--W-LWSSSGTG-VCVFDSDGQ---LLGHIPT--P-GTASNCTFDQAQQRLFI 293 (305)
T ss_dssp --EEEEEEECC--SSSCCCSEEECTTS--C-EEECCSSE-EEEECTTSC---EEEEEEC--S-SCCCEEEECTTSCEEEE
T ss_pred --cCCeEEEEC--CCCCCCeEEECCCC--C-EEEecCCc-EEEECCCCC---EEEEEEC--C-CceeEEEEeCCCCEEEE
Confidence 000111111 12234467888888 4 55555444 999987432 4555552 2 25889999999988888
Q ss_pred eccCCeEEEEE
Q 016185 380 CCEDGAIWRWD 390 (394)
Q Consensus 380 ~~~dg~i~iwd 390 (394)
++.++ ++.++
T Consensus 294 t~~~~-l~~~~ 303 (305)
T 3dr2_A 294 TGGPC-LWMLP 303 (305)
T ss_dssp EETTE-EEEEE
T ss_pred EcCCe-EEEEE
Confidence 87654 44333
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.35 E-value=2.7e-09 Score=91.04 Aligned_cols=224 Identities=9% Similarity=-0.041 Sum_probs=138.6
Q ss_pred EEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeecc
Q 016185 88 TVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRS 167 (394)
Q Consensus 88 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~ 167 (394)
...|. |++..++++...++.|..||..+++.. .+. ....+.++.|++ ++.++++. .
T Consensus 53 gp~~~--~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~-dg~l~v~~-~------------------ 108 (326)
T 2ghs_A 53 GPTFD--PASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIAS-D------------------ 108 (326)
T ss_dssp EEEEE--TTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEEE-T------------------
T ss_pred CCeEe--CCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeC-CCeEEEEE-C------------------
Confidence 45676 875547778878899999998877543 333 356789999999 66666653 3
Q ss_pred ceeeeccCCcEEEEEecCCcEEEEeeccC-CCcccEEEEEecCCCCeeEEeecc------CCcEEEEEccccceeecccc
Q 016185 168 NCLRVGQDESVRLWNVQTGICILIFAGAG-GHRNEVLSVDFHPSDIYRIASCGM------DNTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 168 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~ 240 (394)
++ |.+||..+++......... .....+.+++++| +++++++... .+.|..++ +++
T Consensus 109 -------~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~------- 170 (326)
T 2ghs_A 109 -------DG-LFLRDTATGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGK------- 170 (326)
T ss_dssp -------TE-EEEEETTTCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTE-------
T ss_pred -------CC-EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCc-------
Confidence 44 9999988877543332110 1134689999999 8886665432 24455555 321
Q ss_pred ccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEE-EEeecCCeEEEecCC--CC-CCCCCCCcceecccccCCC
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFI-LSKSVDNEIVLWEPK--MK-EQSPGEGTADILQKYPVPE 314 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l-~~~~~dg~i~~~d~~--~~-~~~~~~~~~~~~~~~~~~~ 314 (394)
+..+..+......++|+ ++.+ ++...++.|.+||+. ++ ... ....+..+....
T Consensus 171 -----------------~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~----~~~~~~~~~~~~ 229 (326)
T 2ghs_A 171 -----------------VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG----KAEVFIDSTGIK 229 (326)
T ss_dssp -----------------EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS----CCEEEEECTTSS
T ss_pred -----------------EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc----CceEEEECCCCC
Confidence 11111122345677887 5555 444567899999986 43 211 011222222233
Q ss_pred CCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEec-cCCCEEEEec
Q 016185 315 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS-YDGSTILSCC 381 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~ 381 (394)
.....+++.+++ .+.++...++.|..||. +++ .+..+. .+...+++++|+ ++++.|+.++
T Consensus 230 ~~p~gi~~d~~G--~lwva~~~~~~v~~~d~-~g~--~~~~i~--~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 230 GGMDGSVCDAEG--HIWNARWGEGAVDRYDT-DGN--HIARYE--VPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp SEEEEEEECTTS--CEEEEEETTTEEEEECT-TCC--EEEEEE--CSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCCeeEECCCC--CEEEEEeCCCEEEEECC-CCC--EEEEEE--CCCCCcEEEEEecCCCCEEEEEe
Confidence 446778888888 45555556688999988 342 445555 334579999998 8887765544
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.35 E-value=2.5e-10 Score=97.94 Aligned_cols=255 Identities=8% Similarity=-0.064 Sum_probs=154.9
Q ss_pred cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee----------cCCeEEEEECCCCeeEEEEEec-
Q 016185 59 RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG----------INGIIRVIDVSNEKLHKSFVGH- 127 (394)
Q Consensus 59 ~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~~~~~~~~~~~~- 127 (394)
.|.++|..+++.+.++..- ..+ .+.++ ||++ +++++. .++.|.+||+.+++.+.++..+
T Consensus 47 ~vsvID~~t~~v~~~i~vG-----~~P--~i~~s--pDg~-~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~ 116 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGA-----FLS--LAVAG--HSGS-DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPD 116 (368)
T ss_dssp EEEEEETTTTEEEEEEEEC-----TTC--EEEEC--TTSS-CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETT
T ss_pred eEEEEECCCCeEEEEEeCC-----CCC--ceEEC--CCCC-EEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCC
Confidence 6789999999999888742 223 46666 9999 666664 4789999999999999998754
Q ss_pred ------CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEE--EEecCCcEEEEeeccCCCc
Q 016185 128 ------GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRL--WNVQTGICILIFAGAGGHR 199 (394)
Q Consensus 128 ------~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~v--wd~~~~~~~~~~~~~~~~~ 199 (394)
......+.++| ++++++.+.. +.+..+.+ +|+.+ +..+.. .
T Consensus 117 ~~~~~~g~~P~~ia~Sp-DGk~lyVan~-----------------------~~~~~v~V~~iD~~t---v~~i~v----~ 165 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCA-SSACLLFFLF-----------------------GSSAAAGLSVPGASD---DQLTKS----A 165 (368)
T ss_dssp SCSCCBSCCTTSEEECT-TSSCEEEEEC-----------------------SSSCEEEEEETTTEE---EEEEEC----S
T ss_pred ccccccCCCcceEEEcC-CCCEEEEEcc-----------------------CCCCeEEEEEEchhh---ceEEEC----C
Confidence 12456899999 5566665542 00356888 88877 445541 1
Q ss_pred ccEEEEEecCCCCeeEEeeccCCcEEEEEccc-----cceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe
Q 016185 200 NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE-----FWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL 274 (394)
Q Consensus 200 ~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 274 (394)
.. ..+.|.....+++.+.||.+.+.|+.+ ++...... . .+.....+. . ...
T Consensus 166 ~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t-----------------~--~i~vg~~P~-~-~~~ 221 (368)
T 1mda_H 166 SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT-----------------G--AQNCSSQAA-Q-ANY 221 (368)
T ss_dssp SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC-----------------T--TSCBCSCCE-E-ETT
T ss_pred Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEee-----------------e--eeeCCCCcc-c-ccc
Confidence 11 223342344566777899999988876 22110000 0 000011111 1 112
Q ss_pred CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC----------CCCeEEEEEeecCCcceEEEE-e---C----
Q 016185 275 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP----------ECDIWFIKFSCDFHYNAAAIG-N---R---- 336 (394)
Q Consensus 275 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~~i~~~~~~~~~~~~~l~~~-~---~---- 336 (394)
++.++..+. +.+.+.|....... .+..+... ......++++|+++ .++.+ . .
T Consensus 222 ~~~~~~vs~-~~V~viD~~~~~~~-------v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~--~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDIPAAGAT-------MKAAIDGNESGRKADNFRSAGFQMVAKLKNTD--GIMILTVEHSRSCLA 291 (368)
T ss_dssp TTEEEECBS-SCCEEEECCSSCCE-------EECCCCSSCTHHHHTTEEECSSSCEEEETTTT--EEEEEEEECSSCTTS
T ss_pred CCEEEEEcC-CEEEEEECCCCcce-------EEEEEEeccccccccccccCcceeeEEcCCCC--EEEEEeccccCcccc
Confidence 444444455 89999998653210 11111100 01111267999985 44443 2 2
Q ss_pred -CCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC-EEEEec-cCCeEEEEEcCC
Q 016185 337 -EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS-TILSCC-EDGAIWRWDAIP 393 (394)
Q Consensus 337 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~iwd~~~ 393 (394)
++.+.++|+.+.+ .+.++... .....++|+|||+ ++++.. .++.|.++|+.+
T Consensus 292 ~~~~~~ViD~~t~~--vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 292 AAENTSSVTASVGQ--TSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp CEEEEEEEESSSCC--EEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred cCCCEEEEECCCCe--EEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 2356699999985 45555521 2588999999998 455665 599999999875
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=2.6e-10 Score=107.64 Aligned_cols=247 Identities=10% Similarity=0.041 Sum_probs=144.9
Q ss_pred ccCccceeEEEEEeeCCCcceEEEEe-----cCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEE
Q 016185 30 QEGKRPLYAVVFNFIDSRYFNVFATV-----GGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVA 103 (394)
Q Consensus 30 ~~h~~~v~~i~~sp~~~~~~~~las~-----~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s 103 (394)
++|...+..++||| ||++||-+ ++.. |++||+.+++.+.... .......++|+ ||+ .|+.
T Consensus 125 ~~~~~~l~~~~~Sp----Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~------~~~k~~~~~Ws---Dg~-~l~y 190 (693)
T 3iuj_A 125 PDGTTALDQLSFSR----DGRILAYSLSLAGSDWREIHLMDVESKQPLETPL------KDVKFSGISWL---GNE-GFFY 190 (693)
T ss_dssp TTSCCEEEEEEECT----TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE------EEEESCCCEEE---TTT-EEEE
T ss_pred CCCcEEEEEEEECC----CCCEEEEEEecCCCceEEEEEEECCCCCCCcccc------CCceeccEEEe---CCC-EEEE
Confidence 34666789999999 78888843 2223 9999999998644311 11112345665 677 6666
Q ss_pred eecCC-------------eEEEEECCCCee--EEEEE--e-cCCceeEEEEcCCCCcEE-EEceeeeEEeeccceeeeee
Q 016185 104 GGING-------------IIRVIDVSNEKL--HKSFV--G-HGDSINEIRTQPLKPSLV-VSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 104 ~~~dg-------------~i~vwd~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~~l-~s~~~~i~~~~~~~~~~~~~ 164 (394)
+..+. .|++|++.++.. ...+. . |...+..+.|+| +++.| ++.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~--------------- 254 (693)
T 3iuj_A 191 SSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAAN--------------- 254 (693)
T ss_dssp EESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEES---------------
T ss_pred EEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEcc---------------
Confidence 66553 499999987643 22222 2 344577899999 55544 44332
Q ss_pred eccceeeeccCCcEEEEEecCCc-EEEEeeccCCCcccEEEEEecCCCCeeEEeeccC---CcEEEEEccccceeecccc
Q 016185 165 IRSNCLRVGQDESVRLWNVQTGI-CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD---NTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 165 ~~~~~~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~ 240 (394)
++....|.++|+.++. ....+. .+....... +++.++.+++....+ +.|..+|+.++..
T Consensus 255 -------~~~~~~i~~~d~~~~~~~~~~l~---~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~------ 317 (693)
T 3iuj_A 255 -------STSGNRLYVKDLSQENAPLLTVQ---GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP------ 317 (693)
T ss_dssp -------SSSCCEEEEEETTSTTCCCEEEE---CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG------
T ss_pred -------CCCCcEEEEEECCCCCCceEEEe---CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc------
Confidence 1113589999997763 334444 355555554 445245555555443 6788899887321
Q ss_pred ccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeec-CC--eEEEecCCCCCCCCCCCcceecccccC-CCCC
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSV-DN--EIVLWEPKMKEQSPGEGTADILQKYPV-PECD 316 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~ 316 (394)
.....+..|...+..+...++.|+.... ++ .|++||+.... ...+.. ....
T Consensus 318 ---------------~~~~~l~~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~----------~~~l~~p~~~~ 372 (693)
T 3iuj_A 318 ---------------AHWRDLIPERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKR----------VREVALPGLGS 372 (693)
T ss_dssp ---------------GGCEEEECCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCE----------EEEECCSSSSE
T ss_pred ---------------cccEEEecCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCe----------eEEeecCCCce
Confidence 0122333344443355556777766655 43 68999987542 222222 2234
Q ss_pred eEEEEEeecCCcceEEEEeCC----CcEEEEEecCCCc
Q 016185 317 IWFIKFSCDFHYNAAAIGNRE----GKIFVWELQSSPP 350 (394)
Q Consensus 317 i~~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~ 350 (394)
+..+.+++++. .++....+ +.|+.||+.+++.
T Consensus 373 ~~~~~~~~d~~--~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 373 VSGFNGKHDDP--ALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEECCCCTTCS--CEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEeeecCCCCC--EEEEEecCCCCCCEEEEEECCCCeE
Confidence 56667777774 34433333 7899999887753
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.34 E-value=4.2e-10 Score=106.25 Aligned_cols=256 Identities=9% Similarity=0.044 Sum_probs=143.8
Q ss_pred cccceEEEEEEEcCCCCcEEEE-----eecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeec
Q 016185 82 KEESFYTVSWACNVDGIPFLVA-----GGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSL 156 (394)
Q Consensus 82 ~~~~v~~~~~~~~~~~~~~l~s-----~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~ 156 (394)
+...+..++|+ |||+ +|+- |+....|++||+.+++.+.... +......++|+ ++..++++....
T Consensus 127 ~~~~l~~~~~S--pDg~-~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~------ 195 (693)
T 3iuj_A 127 GTTALDQLSFS--RDGR-ILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDK------ 195 (693)
T ss_dssp SCCEEEEEEEC--TTSS-EEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSC------
T ss_pred CcEEEEEEEEC--CCCC-EEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecC------
Confidence 44456666665 9999 6662 3334579999999998654311 11123578899 554444443320
Q ss_pred cceeeeeeeccceeeeccCCcEEEEEecCCcE--EEEeeccCC-CcccEEEEEecCCCCeeEEeec----cCCcEEEEEc
Q 016185 157 SLICLLLFIRSNCLRVGQDESVRLWNVQTGIC--ILIFAGAGG-HRNEVLSVDFHPSDIYRIASCG----MDNTVKIWSM 229 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~----~dg~v~iwd~ 229 (394)
...+.+-.......|++|++.++.. ...+.. .. +.....++.|+| ++++|+... .+..|+++|+
T Consensus 196 -------~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~-~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 196 -------PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGA-IPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp -------CC-------CCCCEEEEEETTSCGGGCEEEESC-SGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEET
T ss_pred -------cccccccccCCCcEEEEEECCCCcccceEEEec-CCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEEC
Confidence 0000000000123599999877643 333331 12 344578899999 887765433 2358999998
Q ss_pred cccceeeccccccCCCCCCCCccccccceeeeecCCCceEE-EEEeCcEEE-Eeec---CCeEEEecCCCCCCCCCCCcc
Q 016185 230 KEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC-NRWLGDFIL-SKSV---DNEIVLWEPKMKEQSPGEGTA 304 (394)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~l~-~~~~---dg~i~~~d~~~~~~~~~~~~~ 304 (394)
.++. .....+..+...... +...++.++ .... .+.|..+|+.++...
T Consensus 267 ~~~~----------------------~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~------ 318 (693)
T 3iuj_A 267 SQEN----------------------APLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA------ 318 (693)
T ss_dssp TSTT----------------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG------
T ss_pred CCCC----------------------CceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc------
Confidence 7732 123334444444443 333455444 4333 367999999876410
Q ss_pred eecccccCCCCCeEEEEEeecCCcceEEEEeCCC--cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEecc
Q 016185 305 DILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG--KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCE 382 (394)
Q Consensus 305 ~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 382 (394)
....+..+...+. .|+++++ .++++...++ .|++|++..+ ....+.. ...+.+..+.++++++.|+....
T Consensus 319 -~~~~l~~~~~~~~--~~s~~g~-~lv~~~~~~g~~~l~~~d~~g~---~~~~l~~-p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 319 -HWRDLIPERQQVL--TVHSGSG-YLFAEYMVDATARVEQFDYEGK---RVREVAL-PGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp -GCEEEECCCSSCE--EEEEETT-EEEEEEEETTEEEEEEECTTSC---EEEEECC-SSSSEEEECCCCTTCSCEEEEEE
T ss_pred -ccEEEecCCCCEE--EEEEECC-EEEEEEEECCeeEEEEEECCCC---eeEEeec-CCCceEEeeecCCCCCEEEEEec
Confidence 1123333444444 8999985 2344444454 6888888754 2334432 22356777888888887765544
Q ss_pred C----CeEEEEEcCC
Q 016185 383 D----GAIWRWDAIP 393 (394)
Q Consensus 383 d----g~i~iwd~~~ 393 (394)
+ +.|+.||+.+
T Consensus 391 s~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 391 NYAQPPTLYRFEPKS 405 (693)
T ss_dssp CSSSCCEEEEECTTT
T ss_pred CCCCCCEEEEEECCC
Confidence 4 7899998753
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.33 E-value=8.4e-09 Score=89.94 Aligned_cols=271 Identities=8% Similarity=0.033 Sum_probs=155.0
Q ss_pred EEEEecCC-cEEEEEcCCCceeEEeeecccCC----cccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEE
Q 016185 51 VFATVGGN-RVTVYQCLEGGVIAALQSYVDED----KEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV 125 (394)
Q Consensus 51 ~las~~~d-~i~vw~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 125 (394)
.+..++.+ .|..+|..+|+.+-......... ....+.. ... .++. .++.++.++.|..+|..+++.+....
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVT--VSGG-HVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEE--EETT-EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-Cce--EeCC-EEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 44444544 59999999998765554211000 0122222 112 2344 68888899999999999999888776
Q ss_pred ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccE---
Q 016185 126 GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEV--- 202 (394)
Q Consensus 126 ~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i--- 202 (394)
............ + ..++.++. ++.|..+|.++|+.+..+.. ..++
T Consensus 131 ~~~~~~~~p~~~--~-~~v~v~~~-------------------------~g~l~~~d~~tG~~~W~~~~----~~~~~~~ 178 (376)
T 3q7m_A 131 VAGEALSRPVVS--D-GLVLIHTS-------------------------NGQLQALNEADGAVKWTVNL----DMPSLSL 178 (376)
T ss_dssp CSSCCCSCCEEE--T-TEEEEECT-------------------------TSEEEEEETTTCCEEEEEEC----CC-----
T ss_pred CCCceEcCCEEE--C-CEEEEEcC-------------------------CCeEEEEECCCCcEEEEEeC----CCCceee
Confidence 543222222222 2 24445555 99999999999998887762 2222
Q ss_pred ---EEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeee-ecCCCceEEEEEeCcEE
Q 016185 203 ---LSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA-SVHSNYVDCNRWLGDFI 278 (394)
Q Consensus 203 ---~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~l 278 (394)
...... + ..++.++.++.+..+|..+++..-......... ...+..+ ..... ....+..+
T Consensus 179 ~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~---------~~~~~~~~~~~~~----p~~~~~~v 242 (376)
T 3q7m_A 179 RGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG---------STEIDRLSDVDTT----PVVVNGVV 242 (376)
T ss_dssp CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEEEECCC--------------------CCCCC----CEEETTEE
T ss_pred cCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEEEecccCCC---------CcccccccccCCC----cEEECCEE
Confidence 112222 3 357778889999999998865432211100000 0000000 00011 11236778
Q ss_pred EEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEecc
Q 016185 279 LSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH 358 (394)
Q Consensus 279 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 358 (394)
+.++.++.+..+|.++++. +..... .....+.. ++ ..++.++.++.|..+|..+++. ......
T Consensus 243 ~~~~~~g~l~~~d~~tG~~---------~w~~~~--~~~~~~~~--~~--~~l~~~~~~g~l~~~d~~tG~~--~w~~~~ 305 (376)
T 3q7m_A 243 FALAYNGNLTALDLRSGQI---------MWKREL--GSVNDFIV--DG--NRIYLVDQNDRVMALTIDGGVT--LWTQSD 305 (376)
T ss_dssp EEECTTSCEEEEETTTCCE---------EEEECC--CCEEEEEE--ET--TEEEEEETTCCEEEEETTTCCE--EEEECT
T ss_pred EEEecCcEEEEEECCCCcE---------EeeccC--CCCCCceE--EC--CEEEEEcCCCeEEEEECCCCcE--EEeecc
Confidence 8888899999999988762 222221 12333333 33 3688888899999999998853 333321
Q ss_pred CCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 359 AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 359 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.. ...+..... .+..|+.++.+|.|+++|.++
T Consensus 306 ~~-~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~t 337 (376)
T 3q7m_A 306 LL-HRLLTSPVL--YNGNLVVGDSEGYLHWINVED 337 (376)
T ss_dssp TT-TSCCCCCEE--ETTEEEEECTTSEEEEEETTT
T ss_pred cC-CCcccCCEE--ECCEEEEEeCCCeEEEEECCC
Confidence 01 112222222 256788888999999999764
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.32 E-value=3.4e-09 Score=91.49 Aligned_cols=272 Identities=11% Similarity=0.095 Sum_probs=159.4
Q ss_pred cEEEEEcCC-----CceeEEeeecccCCcccceEEEEE---------EEc--CCCCcEEEEeecCCeEEEEECCCC----
Q 016185 59 RVTVYQCLE-----GGVIAALQSYVDEDKEESFYTVSW---------ACN--VDGIPFLVAGGINGIIRVIDVSNE---- 118 (394)
Q Consensus 59 ~i~vw~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~---------~~~--~~~~~~l~s~~~dg~i~vwd~~~~---- 118 (394)
.+.+.|+.. ++.+..+.... ...+.....| .++ ++.+.+++.+..++.|.|+|+.+.
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~---~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p 120 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPY---INDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREP 120 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSS---SCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSC
T ss_pred eEEEEECCCCCCCcceEEEEEECCC---CCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCc
Confidence 377777776 56665555321 1112222333 123 667767777888999999998755
Q ss_pred eeEEEEE-------ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE
Q 016185 119 KLHKSFV-------GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI 191 (394)
Q Consensus 119 ~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 191 (394)
+..+++. .....-..+...| ++ +++++.. + ..|...+.|.+.|.++++.+..
T Consensus 121 ~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g----------------~---~~g~~~g~v~vlD~~T~~v~~~ 179 (462)
T 2ece_A 121 KIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALG----------------N---EEGEGPGGILMLDHYSFEPLGK 179 (462)
T ss_dssp EEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEE----------------E---TTSCSCCEEEEECTTTCCEEEE
T ss_pred eeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCC----------------C---cCCCCCCeEEEEECCCCeEEEE
Confidence 5666663 0112345677889 55 6666655 0 0112237899999999999998
Q ss_pred eeccCCCcccEEEEEecCCCCeeEEeec-------------------cCCcEEEEEccccceeeccccccCCCCCCCCcc
Q 016185 192 FAGAGGHRNEVLSVDFHPSDIYRIASCG-------------------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 252 (394)
Q Consensus 192 ~~~~~~~~~~i~~~~~~~~~~~~l~s~~-------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 252 (394)
+.........-+.+-|+| +++.+++.. ...+|.+||+.+.+.
T Consensus 180 ~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~------------------ 240 (462)
T 2ece_A 180 WEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR------------------ 240 (462)
T ss_dssp CCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE------------------
T ss_pred EccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE------------------
Confidence 873212222345688899 888888874 478999999988421
Q ss_pred ccccceeeeecC--CCceEEEEE--e--CcEEEEee------cCCeEEEecCCCCCCCCCCCcce-----ecccc-----
Q 016185 253 YVQFPVFIASVH--SNYVDCNRW--L--GDFILSKS------VDNEIVLWEPKMKEQSPGEGTAD-----ILQKY----- 310 (394)
Q Consensus 253 ~~~~~~~~~~~~--~~~i~~~~~--~--~~~l~~~~------~dg~i~~~d~~~~~~~~~~~~~~-----~~~~~----- 310 (394)
+..+..- ......+.| + ++++++++ .+++|.+|....++... ..... ....+
T Consensus 241 -----~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~-~~vIdi~~~~v~~~lp~~~~ 314 (462)
T 2ece_A 241 -----IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA-EKVIEIPAEPLEGNLPEILK 314 (462)
T ss_dssp -----EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE-EEEEEECCEECCSSCCGGGG
T ss_pred -----eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE-EEEEeCCCcccccccccccc
Confidence 2222221 112233444 3 66655555 46678766554321000 00000 00000
Q ss_pred --cCCCCCeEEEEEeecCCcceEEEE-eCCCcEEEEEecC-CCceeeEEeccCCc------------cCCeeEEEeccCC
Q 016185 311 --PVPECDIWFIKFSCDFHYNAAAIG-NREGKIFVWELQS-SPPVLIARLSHAQS------------KSPIRQTAMSYDG 374 (394)
Q Consensus 311 --~~~~~~i~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~-~~~~~~~~~~~~~~------------~~~v~~~~~s~~~ 374 (394)
.........+.+++|++ +|.++ -..+.|.+||+.. ..++.+..+...+. .+....++++|||
T Consensus 315 ~f~~~~~~pa~I~lS~DGr--fLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG 392 (462)
T 2ece_A 315 PFKAVPPLVTDIDISLDDK--FLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG 392 (462)
T ss_dssp GGTEECCCCCCEEECTTSC--EEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS
T ss_pred ccccCCCceeEEEECCCCC--EEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC
Confidence 00023467899999995 44444 4578999999863 34456666553211 1136789999999
Q ss_pred CEEEEec
Q 016185 375 STILSCC 381 (394)
Q Consensus 375 ~~l~s~~ 381 (394)
++|+++.
T Consensus 393 k~LyVaN 399 (462)
T 2ece_A 393 RRVYVTN 399 (462)
T ss_dssp SEEEEEC
T ss_pred CEEEEEc
Confidence 9999887
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.32 E-value=8.4e-10 Score=103.34 Aligned_cols=297 Identities=12% Similarity=0.104 Sum_probs=164.3
Q ss_pred ceEEEEecCCcEEEEEcCCCceeEEeeecccCCcc------cceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEE
Q 016185 49 FNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKE------ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK 122 (394)
Q Consensus 49 ~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 122 (394)
+.+++++..+.|.-+|..+|+.+-........... .....+++ ++. .|+.++.|+.|..+|..+++.+.
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~----~~~-~v~v~~~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL----WKG-KVYVGAWDGRLIALDAATGKEVW 152 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE----ETT-EEEEECTTSEEEEEETTTCCEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE----ECC-EEEEEcCCCEEEEEECCCCCEEe
Confidence 44444444344999999999987665532110000 00011222 244 78888999999999999999998
Q ss_pred EEEec-C----CceeE-EEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccC
Q 016185 123 SFVGH-G----DSINE-IRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG 196 (394)
Q Consensus 123 ~~~~~-~----~~v~~-~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~ 196 (394)
++..+ . ..+.. .... ++.+++..+. .. .+.++.|+.+|.++|+.+..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v~--~~~v~v~~~~-----------------~~---~~~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRVF--KGKVIIGNGG-----------------AE---YGVRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEEE--TTEEEECCBC-----------------TT---TCCBCEEEEEETTTCCEEEEEESSC
T ss_pred eecCCcCcCcCcccccCcEEE--CCEEEEEecc-----------------cc---cCCCCEEEEEECCCCcEEEEeccCC
Confidence 88754 2 11111 1111 2222222210 00 0016899999999999988876321
Q ss_pred CCc-----------------------------ccEEEEEecCCCCeeEEeeccCC-------------------cEEEEE
Q 016185 197 GHR-----------------------------NEVLSVDFHPSDIYRIASCGMDN-------------------TVKIWS 228 (394)
Q Consensus 197 ~~~-----------------------------~~i~~~~~~~~~~~~l~s~~~dg-------------------~v~iwd 228 (394)
... .....++++| ++.+++.+..++ .|..+|
T Consensus 211 ~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD 289 (677)
T 1kb0_A 211 GDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALD 289 (677)
T ss_dssp CCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred CCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEE
Confidence 110 0113567888 666777776654 488889
Q ss_pred ccccceeeccccccCCCCCCCCccccccceeeeecCCCc-eEEEEEeC---cEEEEeecCCeEEEecCCCCCCCCCCCcc
Q 016185 229 MKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY-VDCNRWLG---DFILSKSVDNEIVLWEPKMKEQSPGEGTA 304 (394)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~---~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 304 (394)
.++++..-.....-.. .. .......+ +.....+| +.++.++.+|.++++|.++++........
T Consensus 290 ~~TG~~~W~~~~~~~d---~w----------d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~ 356 (677)
T 1kb0_A 290 PDTGKYKWHYQETPGD---NW----------DYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFV 356 (677)
T ss_dssp TTTCCEEEEEESSTTC---CS----------CCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESS
T ss_pred CCCCCEEEEEecCCCc---cc----------ccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccc
Confidence 8886542221110000 00 00000011 11222235 68899999999999999998741100000
Q ss_pred ------------eecc------------cccCCC--CCeEEEEEeecCCcceEEEEeC----------------------
Q 016185 305 ------------DILQ------------KYPVPE--CDIWFIKFSCDFHYNAAAIGNR---------------------- 336 (394)
Q Consensus 305 ------------~~~~------------~~~~~~--~~i~~~~~~~~~~~~~l~~~~~---------------------- 336 (394)
..+. .++... ..-..++|+|+. .++++...
T Consensus 357 ~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~--~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~ 434 (677)
T 1kb0_A 357 PVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT--GLVYLPAQNVPVNLMDDKKWEFNQAGPGKP 434 (677)
T ss_dssp CCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT--TEEEEEEEECCCEEEECTTCCTTCCCTTST
T ss_pred ccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC--CEEEEeChhcceeeeccccccccccccccc
Confidence 0000 000000 001246788877 35555432
Q ss_pred ---------------------CCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 337 ---------------------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 337 ---------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
.|.|..||+.+++ .+.+++.. .++....+..++.+++.++.||.+++||+++
T Consensus 435 ~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~--~~W~~~~~---~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~t 507 (677)
T 1kb0_A 435 QSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK--AAWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHAAT 507 (677)
T ss_dssp TGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE--EEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccccccccccccccccCCCCCccEEEEEeCCCCc--EEeecCCC---CCCcCcceEeCCCEEEEECCCCcEEEEECCC
Confidence 2789999999885 44444321 3444455667788899999999999999875
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=3.8e-09 Score=89.21 Aligned_cols=246 Identities=11% Similarity=-0.012 Sum_probs=139.9
Q ss_pred eccCccceeEEEEEeeCCCcce-EEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec
Q 016185 29 LQEGKRPLYAVVFNFIDSRYFN-VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI 106 (394)
Q Consensus 29 ~~~h~~~v~~i~~sp~~~~~~~-~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~ 106 (394)
+..+.......+|+| +++ ++++...++ |..|+. +++ ...+. .+...+..+++. ++|+ ++++...
T Consensus 40 l~~~~~~~egp~~~~----~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~-----~~~~~~~gl~~d--~dG~-l~v~~~~ 105 (305)
T 3dr2_A 40 LYDQATWSEGPAWWE----AQRTLVWSDLVGRRVLGWRE-DGT-VDVLL-----DATAFTNGNAVD--AQQR-LVHCEHG 105 (305)
T ss_dssp EECCCSSEEEEEEEG----GGTEEEEEETTTTEEEEEET-TSC-EEEEE-----ESCSCEEEEEEC--TTSC-EEEEETT
T ss_pred EecCCcCccCCeEeC----CCCEEEEEECCCCEEEEEeC-CCC-EEEEe-----CCCCccceeeEC--CCCC-EEEEECC
Confidence 444455678899998 676 666666655 999997 454 33333 233456677766 9998 6666666
Q ss_pred CCeEEEEECCCCeeEEEEEec----CCceeEEEEcCCCCcEEEE----ceeeeEEeeccceeeeeeeccceeeeccCCcE
Q 016185 107 NGIIRVIDVSNEKLHKSFVGH----GDSINEIRTQPLKPSLVVS----ASKVIIISSLSLICLLLFIRSNCLRVGQDESV 178 (394)
Q Consensus 107 dg~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s----~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i 178 (394)
++.|.+|+.. ++........ ...+.++++.| ++.++++ |... .............+.|
T Consensus 106 ~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~------------~~~~~~~~~~~~~~~v 171 (305)
T 3dr2_A 106 RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRK------------PSQGCPADPELAHHSV 171 (305)
T ss_dssp TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSC------------GGGSCCCCCSSSCEEE
T ss_pred CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccc------------cccccccccccCCCeE
Confidence 6889999975 5532222111 13467899999 6777776 3210 0000000000002457
Q ss_pred EEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC------CcEEEEEccccceeeccccccCCCCCCCCcc
Q 016185 179 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTK 252 (394)
Q Consensus 179 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 252 (394)
..+|..+++..... .......++|+| +++.|+.+... +.|..|++..... ..
T Consensus 172 ~~~d~~~g~~~~~~-----~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l-~~--------------- 229 (305)
T 3dr2_A 172 YRLPPDGSPLQRMA-----DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGAL-HD--------------- 229 (305)
T ss_dssp EEECSSSCCCEEEE-----EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEE-EE---------------
T ss_pred EEEcCCCCcEEEEe-----cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCc-cC---------------
Confidence 77776666544332 123457899999 88766666554 6899999875220 00
Q ss_pred ccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcce
Q 016185 253 YVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNA 330 (394)
Q Consensus 253 ~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 330 (394)
..............+.++ |+ +.++..+ .|.+|+.... .+..+..+. .+..++|++++ ..
T Consensus 230 ----~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~-gv~~~~~~g~----------~~~~~~~~~-~~~~~~f~~d~--~~ 290 (305)
T 3dr2_A 230 ----RRHFASVPDGLPDGFCVDRGGW-LWSSSGT-GVCVFDSDGQ----------LLGHIPTPG-TASNCTFDQAQ--QR 290 (305)
T ss_dssp ----EEEEECCSSSCCCSEEECTTSC-EEECCSS-EEEEECTTSC----------EEEEEECSS-CCCEEEECTTS--CE
T ss_pred ----CeEEEECCCCCCCeEEECCCCC-EEEecCC-cEEEECCCCC----------EEEEEECCC-ceeEEEEeCCC--CE
Confidence 000011122334456666 55 4444444 4999998533 344444443 47789999877 46
Q ss_pred EEEEeCCCcEEEEE
Q 016185 331 AAIGNREGKIFVWE 344 (394)
Q Consensus 331 l~~~~~dg~i~iwd 344 (394)
|+.++.++ ++.++
T Consensus 291 L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 291 LFITGGPC-LWMLP 303 (305)
T ss_dssp EEEEETTE-EEEEE
T ss_pred EEEEcCCe-EEEEE
Confidence 66666553 43333
No 226
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.29 E-value=4.6e-10 Score=96.02 Aligned_cols=264 Identities=9% Similarity=-0.002 Sum_probs=157.9
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
...+.++...+ ++.+++ ++.+ +..+|. +++.+..+.. .........+. ++ .|..++.++.|..
T Consensus 59 ~~~~~~~~~~~----~g~l~v-~t~~-l~~~d~-~g~~~~~~~~-----~~~~~~~~~~~---~~--~l~v~t~~~~l~~ 121 (330)
T 3hxj_A 59 EIIECRPSIGK----DGTIYF-GSDK-VYAINP-DGTEKWRFDT-----KKAIVSDFTIF---ED--ILYVTSMDGHLYA 121 (330)
T ss_dssp GEEEECCEETT----TTEECC-SSCE-EEEECC-CGGGGGGSCC----------CCEEEE---TT--EEEEECTTSEEEE
T ss_pred CCcccceEEec----CCcEEE-ecCc-EEEECC-CCcEEEEEEC-----CCCcccCceEE---CC--EEEEEecCCEEEE
Confidence 34455666554 565554 4445 888885 5554332221 11111122222 34 5778888899999
Q ss_pred EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEe
Q 016185 113 IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIF 192 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 192 (394)
+|.. ++....+..+...+.++...+ ++. +..++. ++.|..+|.. ++....+
T Consensus 122 ~d~~-g~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~-------------------------~~~l~~~d~~-g~~~~~~ 172 (330)
T 3hxj_A 122 INTD-GTEKWRFKTKKAIYATPIVSE-DGT-IYVGSN-------------------------DNYLYAINPD-GTEKWRF 172 (330)
T ss_dssp ECTT-SCEEEEEECSSCCCSCCEECT-TSC-EEEECT-------------------------TSEEEEECTT-SCEEEEE
T ss_pred EcCC-CCEEEEEcCCCceeeeeEEcC-CCE-EEEEcC-------------------------CCEEEEECCC-CCEeEEE
Confidence 9987 777777665555566666665 444 444555 8999999998 8777766
Q ss_pred eccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEE
Q 016185 193 AGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNR 272 (394)
Q Consensus 193 ~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 272 (394)
. .....+.++...+ ++.++ .++ +.+..+| .+++. ..........+.++.
T Consensus 173 ~---~~~~~~~~~~~d~-~g~l~-v~t--~~l~~~d-~~g~~-----------------------~~~~~~~~~~~~~~~ 221 (330)
T 3hxj_A 173 K---TNDAITSAASIGK-DGTIY-FGS--DKVYAIN-PDGTE-----------------------KWNFYAGYWTVTRPA 221 (330)
T ss_dssp E---CSSCCCSCCEECT-TCCEE-EES--SSEEEEC-TTSCE-----------------------EEEECCSSCCCSCCE
T ss_pred e---cCCCceeeeEEcC-CCEEE-EEe--CEEEEEC-CCCcE-----------------------EEEEccCCcceeceE
Confidence 6 3445666777776 66644 444 7899999 55321 222222334566666
Q ss_pred EeC-cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCce
Q 016185 273 WLG-DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV 351 (394)
Q Consensus 273 ~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 351 (394)
.++ ..+..++.++.|..+|.. ++ .+..+......+..+.+.+++ .|..++.+|.|..+|. +++
T Consensus 222 ~~~~g~l~v~t~~~gl~~~~~~-g~---------~~~~~~~~~~~~~~~~~~~~g---~l~v~t~~ggl~~~d~-~g~-- 285 (330)
T 3hxj_A 222 ISEDGTIYVTSLDGHLYAINPD-GT---------EKWRFKTGKRIESSPVIGNTD---TIYFGSYDGHLYAINP-DGT-- 285 (330)
T ss_dssp ECTTSCEEEEETTTEEEEECTT-SC---------EEEEEECSSCCCSCCEECTTS---CEEEECTTCEEEEECT-TSC--
T ss_pred ECCCCeEEEEcCCCeEEEECCC-CC---------EeEEeeCCCCccccceEcCCC---eEEEecCCCCEEEECC-CCc--
Confidence 663 367777788888888753 32 122222222222234444444 5788888989999985 443
Q ss_pred eeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 352 LIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 352 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
....+. .....+.++...+++. |..++.+|.+++....
T Consensus 286 ~~~~~~--~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 286 EKWNFE--TGSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp EEEEEE--CSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred EEEEEE--cCCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 334443 2235567777777776 5557889999987654
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=1.2e-09 Score=102.56 Aligned_cols=300 Identities=13% Similarity=0.100 Sum_probs=163.3
Q ss_pred ceEEEEecCCcEEEEEcCCCceeEEeeecccCCcc----cceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEE
Q 016185 49 FNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKE----ESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF 124 (394)
Q Consensus 49 ~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 124 (394)
+.+++++..+.|.-+|..+|+.+-........... ......... ..+. .|+.++.|+.|..+|..+++.+.++
T Consensus 71 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~g-~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 71 GVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVA--VWKG-KVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCE--EETT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccE--EECC-EEEEEccCCEEEEEECCCCCEeeee
Confidence 44444444344999999999987665422110000 000000111 1244 7888899999999999999998887
Q ss_pred Eec--CCceeEEEEcC--CCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCc-
Q 016185 125 VGH--GDSINEIRTQP--LKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHR- 199 (394)
Q Consensus 125 ~~~--~~~v~~~~~~~--~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~- 199 (394)
... ......+..+| .++.+++..+. .. .+.++.|..||.++|+.+..+....+..
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~-----------------~~---~~~~g~v~a~D~~tG~~~W~~~~~~~~p~ 207 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGG-----------------AE---FGVRGYVTAYDAETGKEAWRFYTVPGDPK 207 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBC-----------------TT---TCCBCEEEEEETTTCCEEEEEESSCCCTT
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCC-----------------Cc---cCCCCEEEEEECCCCcEEEEecccCCCcc
Confidence 742 11111111111 02222222110 00 0127899999999999988775210000
Q ss_pred ---------------------------ccEEEEEecCCCCeeEEeeccCCc-------------------EEEEEccccc
Q 016185 200 ---------------------------NEVLSVDFHPSDIYRIASCGMDNT-------------------VKIWSMKEFW 233 (394)
Q Consensus 200 ---------------------------~~i~~~~~~~~~~~~l~s~~~dg~-------------------v~iwd~~~~~ 233 (394)
.....++++| +..+++.+..++. |..+|.++++
T Consensus 208 ~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~ 286 (689)
T 1yiq_A 208 LPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGE 286 (689)
T ss_dssp SCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCC
T ss_pred cccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCc
Confidence 0112577888 6677888877764 9999999865
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCc--eEEEEEeCc---EEEEeecCCeEEEecCCCCCCCCCCCcc----
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY--VDCNRWLGD---FILSKSVDNEIVLWEPKMKEQSPGEGTA---- 304 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~~---- 304 (394)
..-.....-.. ..... .... +..+.+.|+ .++.++.+|.++++|.++++........
T Consensus 287 ~~W~~~~~~~d-------------~wd~~-~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w 352 (689)
T 1yiq_A 287 YVWHYQTTPGD-------------AWDYT-ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSW 352 (689)
T ss_dssp EEEEEESSTTC-------------CSCCC-CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeEeeecCCcc-------------ccccc-CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccc
Confidence 43221110000 00000 0011 112233354 7889999999999999998742000000
Q ss_pred -e--------ec--c--c--ccCCC-----------CCeEEEEEeecCCcceEEEEeC----------------------
Q 016185 305 -D--------IL--Q--K--YPVPE-----------CDIWFIKFSCDFHYNAAAIGNR---------------------- 336 (394)
Q Consensus 305 -~--------~~--~--~--~~~~~-----------~~i~~~~~~~~~~~~~l~~~~~---------------------- 336 (394)
. .+ . . +.... ..-..++|+|+.. ++++...
T Consensus 353 ~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~--~~yv~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (689)
T 1yiq_A 353 TKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG--LVYIPAHIMSAYYEHIPEAPKRNPFKSMY 430 (689)
T ss_dssp EEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT--EEEEEEEECCEEEECCSSCCCCCSCTTSC
T ss_pred ccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC--EEEEeccccceeeeecccccccccccccc
Confidence 0 00 0 0 00000 0112367787763 4554321
Q ss_pred -----------------------CCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 337 -----------------------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 337 -----------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
+|.|+.||+.+++ .+.+++. + .++..-.+...+.+++.++.||.|+.||.++
T Consensus 431 ~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~--~~W~~~~--~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~t 505 (689)
T 1yiq_A 431 QLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ--AAWEVPY--V-TIFNGGTLSTAGNLVFEGSADGRVIAYAADT 505 (689)
T ss_dssp CCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE--EEEEEEE--S-SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccCccccccCcccccCCCCCCCcceeEEEEECCCCC--eEeEccC--C-CCccCccceECCCEEEEECCCCcEEEEECCC
Confidence 3789999999985 4444442 1 2333335566788999999999999999875
No 228
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.27 E-value=1.1e-09 Score=95.65 Aligned_cols=274 Identities=11% Similarity=-0.006 Sum_probs=160.8
Q ss_pred ccccceeeeeccCccceeEEEEEeeCCCcceEEEEec----------CC-cEEEEEcCCCceeEEeeec-ccCC-cccce
Q 016185 20 KREYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVG----------GN-RVTVYQCLEGGVIAALQSY-VDED-KEESF 86 (394)
Q Consensus 20 ~~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~----------~d-~i~vw~~~~~~~~~~~~~~-~~~~-~~~~v 86 (394)
....+...++..-..+ .++++| ++++++.+. .+ .|.++|..+++.+..+..- .... ....-
T Consensus 106 ~~t~~vv~~I~vG~~P--gia~Sp----Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P 179 (426)
T 3c75_H 106 GSTGRILGMTDGGFLP--HPVAAE----DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQ 179 (426)
T ss_dssp TTTTEEEEEEEECSSC--EEEECT----TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCG
T ss_pred CCCCEEEEEEECCCCC--ceEECC----CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 3445566666544445 899999 677666664 23 3999999999988877631 0000 01111
Q ss_pred EEEEEEEcCCCCcEEEEeec--CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeee
Q 016185 87 YTVSWACNVDGIPFLVAGGI--NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 87 ~~~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~ 164 (394)
..+.++ |||+ +|+++.. ++.|.+.|+.+++.+.++..... ....|.+...+++.+.
T Consensus 180 ~~~~~s--pDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~--------------- 237 (426)
T 3c75_H 180 WMNALT--PDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCR--------------- 237 (426)
T ss_dssp GGSEEC--TTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEET---------------
T ss_pred ceEEEc--CCCC-EEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcC---------------
Confidence 234555 9999 7777653 68999999999999988874221 2334434466666666
Q ss_pred eccceeeeccCCcEEEEEecCCcEEEEee-ccCCCcccE-EEEEecCCCCeeEEeeccCCcEEEEEccccceeecccccc
Q 016185 165 IRSNCLRVGQDESVRLWNVQTGICILIFA-GAGGHRNEV-LSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 165 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~~~~i-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
||.+.+.+..+++...... .......++ ..+.+.+ ++..++..+..+.+.+.|..............
T Consensus 238 ----------dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~-dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~ 306 (426)
T 3c75_H 238 ----------DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSL-RSGRLVWPTYTGKIFQADLTAEGATFRAPIEA 306 (426)
T ss_dssp ----------TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECT-TTCEEEEEBTTSEEEEEEECSSCEEECCCEES
T ss_pred ----------CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecC-CCCEEEEEeCCCcEEEEeccCCceEEeeeeee
Confidence 8888888886665443210 000111221 2356677 66656555678899999987632211110000
Q ss_pred CCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec----------CCeEEEecCCCCCCCCCCCcceecccc
Q 016185 243 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV----------DNEIVLWEPKMKEQSPGEGTADILQKY 310 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~----------dg~i~~~d~~~~~~~~~~~~~~~~~~~ 310 (394)
.... ...... .+.....+.++ ++.+++... ++.|.++|+.+.+ .+.++
T Consensus 307 ~~~~--------~i~~g~---~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---------vv~~I 366 (426)
T 3c75_H 307 LTEA--------ERADDW---RPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---------RINKI 366 (426)
T ss_dssp SCTT--------TGGGTE---EECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---------EEEEE
T ss_pred cccc--------cccccc---ccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe---------EEEEE
Confidence 0000 000000 01111123444 555554432 4579999999887 45555
Q ss_pred cCCCCCeEEEEEeecCCcceEEEEe-CCCcEEEEEecCCCceeeEEe
Q 016185 311 PVPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQSSPPVLIARL 356 (394)
Q Consensus 311 ~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~ 356 (394)
.... ....+.|+|+++. ++++.. .++.|.++|+.+.+ .+.++
T Consensus 367 ~vg~-~P~gia~spDg~~-~lyv~n~~s~~VsVID~~t~k--vv~tI 409 (426)
T 3c75_H 367 ELGH-EIDSINVSQDAEP-LLYALSAGTQTLHIYDAATGE--ELRSV 409 (426)
T ss_dssp EEEE-EECEEEECCSSSC-EEEEEETTTTEEEEEETTTCC--EEEEE
T ss_pred ECCC-CcCeEEEccCCCE-EEEEEcCCCCeEEEEECCCCC--EEEEe
Confidence 4322 4678999999942 666666 69999999999985 55665
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.22 E-value=1.5e-07 Score=77.75 Aligned_cols=252 Identities=6% Similarity=-0.063 Sum_probs=145.0
Q ss_pred eEEEEecCCcEEEEEcCCCcee-----EEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEE
Q 016185 50 NVFATVGGNRVTVYQCLEGGVI-----AALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF 124 (394)
Q Consensus 50 ~~las~~~d~i~vw~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 124 (394)
.+|..+..+.|+.+++...... ..+. ........++|. +++..+.++-..++.|..+++........+
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~-----~~~~~~~gi~~d--~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLH-----IPAKVIIGLAFD--CVDKVVYWTDISEPSIGRASLHGGEPTTII 74 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEE-----EEEEEEEEEEEE--TTTTEEEEEETTTTEEEEEESSSCCCEEEE
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeec-----CCCCcEEEEEEe--cCCCEEEEEECCCCEEEEEecCCCCcEEEE
Confidence 3455555556888887654321 1111 112334567776 866635556667889999998765443333
Q ss_pred EecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEE
Q 016185 125 VGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLS 204 (394)
Q Consensus 125 ~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~ 204 (394)
.........+++.++++.++++... .+.|.++++.......... ........
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~-------------------------~~~I~~~~~~g~~~~~~~~---~~~~~P~~ 126 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQ-------------------------LDRIEVAKMDGTQRRVLFD---TGLVNPRG 126 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETT-------------------------TTEEEEEETTSCSCEEEEC---SSCSSEEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECC-------------------------CCEEEEEEcCCCCEEEEEE---CCCCCccE
Confidence 2222467899999855666666666 7889999986443322222 12245689
Q ss_pred EEecCCCCeeEEeecc--CCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcE-EE
Q 016185 205 VDFHPSDIYRIASCGM--DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDF-IL 279 (394)
Q Consensus 205 ~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-l~ 279 (394)
++++|.++.++++... .+.|..+++..... .............++++ ++. .+
T Consensus 127 i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-----------------------~~~~~~~~~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 127 IVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-----------------------RILAQDNLGLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp EEEETTTTEEEEEECCSSSCEEEEEETTSCCC-----------------------EEEECTTCSCEEEEEEETTTTEEEE
T ss_pred EEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-----------------------EEEEECCCCCCcEEEEcCCCCEEEE
Confidence 9999933554454433 46788887754110 00111122346677886 444 45
Q ss_pred EeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccC
Q 016185 280 SKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA 359 (394)
Q Consensus 280 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 359 (394)
+-...+.|.++|+..... ...... ......++. ++. .++++....+.|..+|..++ +.+..+..
T Consensus 184 ~d~~~~~I~~~~~~g~~~---------~~~~~~-~~~P~gi~~--d~~-~lyva~~~~~~v~~~d~~~g--~~~~~i~~- 247 (267)
T 1npe_A 184 VDAGTHRAECLNPAQPGR---------RKVLEG-LQYPFAVTS--YGK-NLYYTDWKTNSVIAMDLAIS--KEMDTFHP- 247 (267)
T ss_dssp EETTTTEEEEEETTEEEE---------EEEEEC-CCSEEEEEE--ETT-EEEEEETTTTEEEEEETTTT--EEEEEECC-
T ss_pred EECCCCEEEEEecCCCce---------EEEecC-CCCceEEEE--eCC-EEEEEECCCCeEEEEeCCCC--CceEEEcc-
Confidence 555678999999875431 111111 122345554 332 45555556789999998877 34555552
Q ss_pred CccCCeeEEEeccCCC
Q 016185 360 QSKSPIRQTAMSYDGS 375 (394)
Q Consensus 360 ~~~~~v~~~~~s~~~~ 375 (394)
+.......+++.|++.
T Consensus 248 g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 248 HKQTRLYGITIALSQC 263 (267)
T ss_dssp SSCCCCCCEEEECSCC
T ss_pred ccccccceeeecCccC
Confidence 2122467788888754
No 230
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.20 E-value=1.4e-08 Score=95.16 Aligned_cols=298 Identities=8% Similarity=0.025 Sum_probs=154.7
Q ss_pred eEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec------CCeEEEEECCCCeeEE
Q 016185 50 NVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI------NGIIRVIDVSNEKLHK 122 (394)
Q Consensus 50 ~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~ 122 (394)
..++.++.++ +..+|..+|+.+-.+...........+...-.. .++ .++.++. +|.|+.+|..+++.+.
T Consensus 129 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~--~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 129 GKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKG--KVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETT--EEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECC--EEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 3455555555 999999999987776632010011111111111 234 4555543 7999999999999998
Q ss_pred EEEecCCc--------------------------------eeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeecccee
Q 016185 123 SFVGHGDS--------------------------------INEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCL 170 (394)
Q Consensus 123 ~~~~~~~~--------------------------------v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~ 170 (394)
++...... ...++++| +..+++.+...-..|........ ..++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~--~gd~~~ 281 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPK--GGDNLY 281 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTT--CCCCTT
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCcc--CCCCee
Confidence 88643211 12466777 44455544430000110000000 001111
Q ss_pred eeccCCcEEEEEecCCcEEEEeeccCCCc-------ccEEEEEecCCCC---eeEEeeccCCcEEEEEccccceeecccc
Q 016185 171 RVGQDESVRLWNVQTGICILIFAGAGGHR-------NEVLSVDFHPSDI---YRIASCGMDNTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 171 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 240 (394)
+ +.|..+|.++|+....+... .|. ....-+.... ++ ..++.++.+|.++++|..+++......+
T Consensus 282 ~----~sv~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~ 355 (677)
T 1kb0_A 282 L----ASIVALDPDTGKYKWHYQET-PGDNWDYTSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNF 355 (677)
T ss_dssp T----TEEEEECTTTCCEEEEEESS-TTCCSCCCCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred e----EEEEEEECCCCCEEEEEecC-CCcccccccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccc
Confidence 1 35999999999998887731 121 1122233333 55 6899999999999999999765433221
Q ss_pred ccCCCCCCCCccccccce------------eeee---cCCCceEEEEEe--CcEEEEeec--------------------
Q 016185 241 TWTDLPSKFPTKYVQFPV------------FIAS---VHSNYVDCNRWL--GDFILSKSV-------------------- 283 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~------------~~~~---~~~~~i~~~~~~--~~~l~~~~~-------------------- 283 (394)
.-........ ....++ .... +...+ ..++++ ..++++...
T Consensus 356 ~~~~~~~~~d--~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w-~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~ 432 (677)
T 1kb0_A 356 VPVNWASGYD--KHGKPIGIAAARDGSKPQDAVPGPYGAHNW-HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (677)
T ss_dssp SCCSSEEEEC--TTSCEEECGGGGCTTSCEECSSCTTCSSCS-SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred cccCcccccC--CCCceeeccccCcCCCccEECcCcccccCC-CCceEcCCCCEEEEeChhcceeeeccccccccccccc
Confidence 1100000000 000000 0000 00000 134454 344444322
Q ss_pred -----------------------CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcE
Q 016185 284 -----------------------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKI 340 (394)
Q Consensus 284 -----------------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i 340 (394)
.|.|..||+.+++ .+-+++. ..++....+...+ .+++.++.||.+
T Consensus 433 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~---------~~W~~~~-~~~~~~g~~~~~g--~~v~~g~~dg~l 500 (677)
T 1kb0_A 433 KPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK---------AAWSVEH-VSPWNGGTLTTAG--NVVFQGTADGRL 500 (677)
T ss_dssp STTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE---------EEEEEEE-SSSCCCCEEEETT--TEEEEECTTSEE
T ss_pred ccccccccccccccccccCCCCCccEEEEEeCCCCc---------EEeecCC-CCCCcCcceEeCC--CEEEEECCCCcE
Confidence 2789999998876 2222221 1233444566666 478889999999
Q ss_pred EEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEE
Q 016185 341 FVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTIL 378 (394)
Q Consensus 341 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 378 (394)
++||..+++ .+.++.. ++...-.-+.|.++|+.++
T Consensus 501 ~a~D~~tG~--~lw~~~~-~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 501 VAYHAATGE--KLWEAPT-GTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEETTTCC--EEEEEEC-SSCCCSCCEEEEETTEEEE
T ss_pred EEEECCCCc--eeeeeeC-CCCcccCCEEEEeCCEEEE
Confidence 999999996 4444441 1112223355667876443
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.19 E-value=2.3e-08 Score=93.93 Aligned_cols=173 Identities=10% Similarity=0.041 Sum_probs=94.4
Q ss_pred eEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee------cCCeEEEEECCCCeeEE
Q 016185 50 NVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG------INGIIRVIDVSNEKLHK 122 (394)
Q Consensus 50 ~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~ 122 (394)
..++.++.++ |..+|..+|+.+-.............+...-.. .++. ++.+. .+|.|..||..+++.+.
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~--v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGK--VVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTE--EEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCE--EEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 3455566565 999999999987666532010011111111011 1444 44443 37899999999999988
Q ss_pred EEEecC-------------------------------CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceee
Q 016185 123 SFVGHG-------------------------------DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLR 171 (394)
Q Consensus 123 ~~~~~~-------------------------------~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~ 171 (394)
++.... .....+++.| +..+++.+...-..|......- ...+++++
T Consensus 198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~--~~gd~~y~ 274 (689)
T 1yiq_A 198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQ--AKGDNLFL 274 (689)
T ss_dssp EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHT--TCSCCTTT
T ss_pred EecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCC--CCCCceee
Confidence 876210 0012456666 4455555554111111000000 00011111
Q ss_pred eccCCcEEEEEecCCcEEEEeeccCCCc-------ccEEEEEecCCCCe---eEEeeccCCcEEEEEcccccee
Q 016185 172 VGQDESVRLWNVQTGICILIFAGAGGHR-------NEVLSVDFHPSDIY---RIASCGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~---~l~s~~~dg~v~iwd~~~~~~~ 235 (394)
+.|..+|.++|+.+..+... .|. .++....... ++. .++.++.+|.++++|.++++..
T Consensus 275 ----~~v~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 275 ----SSIVAVNADTGEYVWHYQTT-PGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp ----TEEEEEETTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ----eeEEEEEccCCceeEeeecC-CcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 25999999999999887631 121 1222222222 443 7889999999999999997764
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.19 E-value=2.4e-11 Score=105.52 Aligned_cols=205 Identities=9% Similarity=-0.009 Sum_probs=112.3
Q ss_pred CCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 96 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
++. .+++++.||.|+.||..+++.+.++.. +.+.+..+.. ++.++++++. |
T Consensus 8 ~~~-~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~-------------------------d 58 (369)
T 2hz6_A 8 PET-LLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPN-------------------------D 58 (369)
T ss_dssp CTT-EEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTT-------------------------T
T ss_pred eCC-EEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCC-------------------------C
Confidence 455 899999999999999999999988876 4555555555 5566777677 9
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcc-cEEE-EEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRN-EVLS-VDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~-~i~~-~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
+.|+.||..+|+.+..+. .+.. .+.+ ..+. .+..+++++.|+.++.||..+++..-
T Consensus 59 g~l~a~d~~tG~~~w~~~---~~~~~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w----------------- 116 (369)
T 2hz6_A 59 GSLYTLGSKNNEGLTKLP---FTIPELVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQ----------------- 116 (369)
T ss_dssp CCEEEC-----CCSEECS---CCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------
T ss_pred CEEEEEECCCCceeeeee---ccCccccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEE-----------------
Confidence 999999999998776654 2211 1111 1111 34467888899999999999865321
Q ss_pred cccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecC-CcceEE
Q 016185 254 VQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDF-HYNAAA 332 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~l~ 332 (394)
....+.. + .....++.+++++.|+.|+.||.++++.. .++.... .....+..+. ....++
T Consensus 117 ------~~~~~~~-~-~~~p~~~~v~~~~~dg~v~a~d~~tG~~~---------W~~~~~~--~~~~~~~~~~~~~~~v~ 177 (369)
T 2hz6_A 117 ------TLSSAFA-D-SLSPSTSLLYLGRTEYTITMYDTKTRELR---------WNATYFD--YAASLPEDDVDYKMSHF 177 (369)
T ss_dssp ------------------------EEEEEEEEEEECCCSSSSSCC---------CEEEEEE--ECCBCCCCCTTCCCCEE
T ss_pred ------EecCCCc-c-cccccCCEEEEEecCCEEEEEECCCCCEE---------EeEeccc--ccCccccCCccccceEE
Confidence 1111110 0 01114778888999999999999988631 1111100 0111222221 002577
Q ss_pred EEeCCCcEEEEEecCCCceeeEEeccCCccCCeeE-EEeccCCC
Q 016185 333 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQ-TAMSYDGS 375 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~~~ 375 (394)
+++.||.|+.||..+++. +.+... ..++.. ..+++++.
T Consensus 178 ~~~~dg~v~a~d~~tG~~--~W~~~~---~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 178 VSNGDGLVVTVDSESGDV--LWIQNY---ASPVVAFYVWQREGL 216 (369)
T ss_dssp EEETSCEEEEECTTTCCE--EEEEEC---SSCEEEEEECTTSSC
T ss_pred EECCCCEEEEEECCCCcE--EEEecC---CCceEEEEEecCCce
Confidence 788999999999998853 444331 134433 45555654
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=7.2e-12 Score=108.77 Aligned_cols=178 Identities=8% Similarity=-0.020 Sum_probs=95.1
Q ss_pred ceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEec
Q 016185 49 FNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH 127 (394)
Q Consensus 49 ~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 127 (394)
+..+++++.++ |+.||..+|+.+-.++. +.+.+..+. .++. ++++++.||.|+.||.++++.+..+..+
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------~~~~s~p~~--~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------DPVLQVPTH--VEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-------CCSCCCC-------C-CEEECTTTCCEEEC-----CCSEECSCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-------CCceecceE--cCCC-EEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 45667777766 99999999998777663 223333333 5676 7788889999999999888877666533
Q ss_pred CC-ceeE-EEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEE
Q 016185 128 GD-SINE-IRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSV 205 (394)
Q Consensus 128 ~~-~v~~-~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~ 205 (394)
.. .+.+ ..+. .+..+++++. ++.|+.||.++|+.+..+. .+. ..
T Consensus 79 ~~~~~~~sp~~~--~~~~v~~g~~-------------------------dg~v~a~D~~tG~~~w~~~---~~~----~~ 124 (369)
T 2hz6_A 79 IPELVQASPCRS--SDGILYMGKK-------------------------QDIWYVIDLLTGEKQQTLS---SAF----AD 124 (369)
T ss_dssp HHHHHTTCSCC-------CCCCEE-------------------------EEEEEEECCC---------------------
T ss_pred CccccccCceEe--cCCEEEEEeC-------------------------CCEEEEEECCCCcEEEEec---CCC----cc
Confidence 21 1110 0111 2245666666 9999999999999887776 232 23
Q ss_pred EecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeC-----cEEEE
Q 016185 206 DFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLG-----DFILS 280 (394)
Q Consensus 206 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~l~~ 280 (394)
.++| ++..+++++.|+.|+.||.++++..-... .... ....+.+ ..+++
T Consensus 125 ~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~---------------------~~~~----~~~~~~~~~~~~~~v~~ 178 (369)
T 2hz6_A 125 SLSP-STSLLYLGRTEYTITMYDTKTRELRWNAT---------------------YFDY----AASLPEDDVDYKMSHFV 178 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEE---------------------EEEE----CCBCCCCCTTCCCCEEE
T ss_pred cccc-cCCEEEEEecCCEEEEEECCCCCEEEeEe---------------------cccc----cCccccCCccccceEEE
Confidence 4567 77788999999999999999854311110 0000 1111112 56777
Q ss_pred eecCCeEEEecCCCCC
Q 016185 281 KSVDNEIVLWEPKMKE 296 (394)
Q Consensus 281 ~~~dg~i~~~d~~~~~ 296 (394)
++.||.|..||.++++
T Consensus 179 ~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 179 SNGDGLVVTVDSESGD 194 (369)
T ss_dssp EETSCEEEEECTTTCC
T ss_pred ECCCCEEEEEECCCCc
Confidence 8899999999999876
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.17 E-value=2.6e-09 Score=91.81 Aligned_cols=234 Identities=8% Similarity=-0.036 Sum_probs=136.8
Q ss_pred ceEEEEEEEcCCCCcEEEEee--cCCeEEEEECCCCeeEEEEE-------ecCCceeEEEEcCCCCcEEEEceeeeEEee
Q 016185 85 SFYTVSWACNVDGIPFLVAGG--INGIIRVIDVSNEKLHKSFV-------GHGDSINEIRTQPLKPSLVVSASKVIIISS 155 (394)
Q Consensus 85 ~v~~~~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~ 155 (394)
....++++ ++|+ ++++.. .++.++||.+.+++. ..+. .|...+..+++++ +++++++-...
T Consensus 18 ~p~~va~~--~~g~-~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~----- 87 (343)
T 2qe8_A 18 APGNITLT--PDGR-LFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGN----- 87 (343)
T ss_dssp CEEEEEEC--TTSC-EEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHH-----
T ss_pred CcceEEEC--CCCC-EEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCC-----
Confidence 44566666 9998 777753 234355565545543 2221 2445788999999 56665543210
Q ss_pred ccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeecc---CCCcccEEEEEecCCCCeeEEeec---cCCcEEEEEc
Q 016185 156 LSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA---GGHRNEVLSVDFHPSDIYRIASCG---MDNTVKIWSM 229 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~s~~---~dg~v~iwd~ 229 (394)
..-.++.|.+||+.+++.+..+... ..+...+..+++++.++..+++.. .++.|.+||+
T Consensus 88 ---------------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~ 152 (343)
T 2qe8_A 88 ---------------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDL 152 (343)
T ss_dssp ---------------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEET
T ss_pred ---------------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEEC
Confidence 0000368999999999877766521 012345689999973456666665 6889999999
Q ss_pred cccceeeccccccCCCCCCCCccccccceeeeecCCCce---EEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCccee
Q 016185 230 KEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV---DCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADI 306 (394)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 306 (394)
.+++. ...+..|.... ..+...|..+.+.+.++.++.|..
T Consensus 153 ~~g~~-----------------------~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~-------------- 195 (343)
T 2qe8_A 153 QTGLA-----------------------ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL-------------- 195 (343)
T ss_dssp TTCCE-----------------------EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC--------------
T ss_pred CCCCE-----------------------EEEecCCCcccccccceeECCEEEEeccCCCceeceec--------------
Confidence 87331 22222221110 111223555555566666655431
Q ss_pred cccccCCCCCeEEEEEeecCCcceEEEEeCCC-cEEEEEecC---CCc---eeeEEeccCCccCCeeEEEeccCCCEEEE
Q 016185 307 LQKYPVPECDIWFIKFSCDFHYNAAAIGNREG-KIFVWELQS---SPP---VLIARLSHAQSKSPIRQTAMSYDGSTILS 379 (394)
Q Consensus 307 ~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~---~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 379 (394)
.+..++++|++ ..|+.+..++ .|..++... +.. .....+...++......++++++|.++++
T Consensus 196 ---------~~~gia~s~dg--~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va 264 (343)
T 2qe8_A 196 ---------GVNGIVLDAEN--EWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVG 264 (343)
T ss_dssp ---------CEEEEEECTTS--CEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEE
T ss_pred ---------ccceeEeccCC--CEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEE
Confidence 35679999999 5667666555 454444321 100 00000010023345678999999999999
Q ss_pred eccCCeEEEEEc
Q 016185 380 CCEDGAIWRWDA 391 (394)
Q Consensus 380 ~~~dg~i~iwd~ 391 (394)
...++.|.+||.
T Consensus 265 ~~~~~~V~~~d~ 276 (343)
T 2qe8_A 265 DLAHSAIGVITS 276 (343)
T ss_dssp EGGGTEEEEEET
T ss_pred ccCCCeEEEEEC
Confidence 999999999997
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.15 E-value=2.5e-09 Score=91.74 Aligned_cols=275 Identities=8% Similarity=-0.095 Sum_probs=155.4
Q ss_pred cccceeeeeccCccceeEEEEEeeCCCcceEEEEec----------CCc-EEEEEcCCCceeEEeeecccCC--cccceE
Q 016185 21 REYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVG----------GNR-VTVYQCLEGGVIAALQSYVDED--KEESFY 87 (394)
Q Consensus 21 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~----------~d~-i~vw~~~~~~~~~~~~~~~~~~--~~~~v~ 87 (394)
..++...++.....+ .++|+| ++++++.+. .+. |.+||+.+++.+..+....... ....-.
T Consensus 54 ~t~~v~~~i~vG~~P--~i~~sp----Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~ 127 (368)
T 1mda_H 54 GCGVTLGHSLGAFLS--LAVAGH----SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH 127 (368)
T ss_dssp TTTEEEEEEEECTTC--EEEECT----TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT
T ss_pred CCCeEEEEEeCCCCC--ceEECC----CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc
Confidence 445666666544455 799999 677777765 234 9999999999988886320000 001122
Q ss_pred EEEEEEcCCCCcEEEEeec--CCeEEE--EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeee
Q 016185 88 TVSWACNVDGIPFLVAGGI--NGIIRV--IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLL 163 (394)
Q Consensus 88 ~~~~~~~~~~~~~l~s~~~--dg~i~v--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~ 163 (394)
.++++ |||+ +++++.. +..|.+ +|..+ +.++... +. ....|++...+++.+.
T Consensus 128 ~ia~S--pDGk-~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~-------------- 183 (368)
T 1mda_H 128 IIGNC--ASSA-CLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSC-------------- 183 (368)
T ss_dssp SEEEC--TTSS-CEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCC--------------
T ss_pred eEEEc--CCCC-EEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcC--------------
Confidence 36666 9999 7777654 467888 88866 4555421 11 2233545556666666
Q ss_pred eeccceeeeccCCcEEEEEecC-----CcEEE----EeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccce
Q 016185 164 FIRSNCLRVGQDESVRLWNVQT-----GICIL----IFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWT 234 (394)
Q Consensus 164 ~~~~~~~~~~~d~~i~vwd~~~-----~~~~~----~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 234 (394)
|+.+.+.|+.+ ++... .+. -...+. . .+.++. ++..+. +.+.+.|+.....
T Consensus 184 -----------dg~~~~vd~~~~~~~~~~v~~~~t~~i~---vg~~P~---~-~~~~~~-~~~vs~-~~V~viD~~~~~~ 243 (368)
T 1mda_H 184 -----------PASLAASDLAAAPAAAGIVGAQCTGAQN---CSSQAA---Q-ANYPGM-LVWAVA-SSILQGDIPAAGA 243 (368)
T ss_dssp -----------TTSCEEEECCSSCCCCEECCCCSCTTSC---BCSCCE---E-ETTTTE-EEECBS-SCCEEEECCSSCC
T ss_pred -----------CCCEEEEECccccccCCeEEEEeeeeee---CCCCcc---c-cccCCE-EEEEcC-CEEEEEECCCCcc
Confidence 99998888876 33221 011 112333 3 442444 444444 8999999865221
Q ss_pred eeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEeec---------CCeEEEecCCCCCCCCCCCc
Q 016185 235 YVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV---------DNEIVLWEPKMKEQSPGEGT 303 (394)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~---------dg~i~~~d~~~~~~~~~~~~ 303 (394)
.......... . ....... .+.....+.++ ++.++.+.. ++.+.++|+.+.+
T Consensus 244 ~v~~~~~~~~-------~--~~~~~~~--~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~------- 305 (368)
T 1mda_H 244 TMKAAIDGNE-------S--GRKADNF--RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ------- 305 (368)
T ss_dssp EEECCCCSSC-------T--HHHHTTE--EECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC-------
T ss_pred eEEEEEEecc-------c--ccccccc--ccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe-------
Confidence 1100000000 0 0000000 01111113444 566665432 2356699999886
Q ss_pred ceecccccCCCCCeEEEEEeecCCcceEEEEe-CCCcEEEEEecCCCceeeEEeccCCccCCeeEEEecc
Q 016185 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGN-REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSY 372 (394)
Q Consensus 304 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 372 (394)
.+.+++... ....++|+|+++ .++++.. .++.|.++|+.+. +.+.+++.. .....+++.+
T Consensus 306 --vv~~i~vg~-~p~gi~~s~Dg~-~l~va~~~~~~~VsVID~~t~--kvv~~I~vg---~~P~~i~~~~ 366 (368)
T 1mda_H 306 --TSGPISNGH-DSDAIIAAQDGA-SDNYANSAGTEVLDIYDAASD--QDQSSVELD---KGPESLSVQN 366 (368)
T ss_dssp --EEECCEEEE-EECEEEECCSSS-CEEEEEETTTTEEEEEESSSC--EEEEECCCC---SCCCEEECCC
T ss_pred --EEEEEECCC-CcceEEECCCCC-EEEEEccCCCCeEEEEECCCC--cEEEEEECC---CCCCEEEeec
Confidence 455554433 467899999995 3566666 5999999999998 466666622 3455666654
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.12 E-value=1.1e-06 Score=84.32 Aligned_cols=310 Identities=5% Similarity=-0.032 Sum_probs=182.8
Q ss_pred eeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEEC
Q 016185 36 LYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDV 115 (394)
Q Consensus 36 v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~ 115 (394)
|.++...+ ++.+++....+++..|+..+++...... ......|.++... ++|. |..|+.++-+..||.
T Consensus 175 i~~i~~d~----~g~lwigt~~~Gl~~~~~~~~~~~~~~~----~~~~~~i~~i~~d--~~g~--lwigt~~~Gl~~~~~ 242 (795)
T 4a2l_A 175 IASTLYRQ----GDQIYIGTSTDGLYTYSITQKTFEKVIP----ILGTKQIQAILQQ--SPTR--IWVATEGAGLFLINP 242 (795)
T ss_dssp CEEEEEEE----TTEEEEEESSSCEEEEETTTCCEEECC--------CCCEEEEEEE--ETTE--EEEEEBSSCEEEEET
T ss_pred eEEEEECC----CCCEEEEECCCCEEEEeCCCCeEEEecC----CCCCCeeEEEEEc--CCCC--EEEEECCCCeEEEeC
Confidence 88888887 6777776555679999977765432211 1124456666654 6675 555655545889998
Q ss_pred CCCeeEEEEEe-------cCCceeEEEEcCCCCcEEEEceeeeEEeec---------------------cceeeeeeecc
Q 016185 116 SNEKLHKSFVG-------HGDSINEIRTQPLKPSLVVSASKVIIISSL---------------------SLICLLLFIRS 167 (394)
Q Consensus 116 ~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~---------------------~~~~~~~~~~~ 167 (394)
.+++....... ....|.++...+ ++.+.+....-+..++. .+.++...+++
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g 321 (795)
T 4a2l_A 243 KTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG 321 (795)
T ss_dssp TTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS
T ss_pred CCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc
Confidence 77654332211 135688998887 44544433223333321 12334444567
Q ss_pred ceeeeccCCcEEEEEecCCcEEEEeecc---CCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCC
Q 016185 168 NCLRVGQDESVRLWNVQTGICILIFAGA---GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 168 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
.+-+|+.++-|..|+..++......... .-....|.++..++ ++. |..|+.++-|..||..+.....-..
T Consensus 322 ~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~----- 394 (795)
T 4a2l_A 322 GMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKN-LWIGTNDGGLNLYNPITQRFTSYTL----- 394 (795)
T ss_dssp CEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSC-EEEEESSSCEEEECTTTCCEEEECC-----
T ss_pred CEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCC-EEEEECCCCeEEEcCCCCcEEEEec-----
Confidence 8888888888999987665433221100 01245699999887 666 6667777779999987632100000
Q ss_pred CCCCCCccccccceeee-ecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccc--ccCCCCCeEE
Q 016185 245 LPSKFPTKYVQFPVFIA-SVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK--YPVPECDIWF 319 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~i~~ 319 (394)
.+.... ......|.++..+ ++.+..|+.++-|..||..+++.. .... .......|.+
T Consensus 395 -----------~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-------~~~~~~~~l~~~~v~~ 456 (795)
T 4a2l_A 395 -----------QEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-------NFNQRNSQLVNENVYA 456 (795)
T ss_dssp -----------C------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-------EECTTTSCCSCSCEEE
T ss_pred -----------CCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-------EeecCCCCcCCCeeEE
Confidence 000000 1124568888886 443777888778999998876411 1110 0123456888
Q ss_pred EEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEecc-----CCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 320 IKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSH-----AQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 320 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
+...+++ .|..|+. +-|.+||..+++ ...+.. ......|.++...++|.+.+.+. +-|..||..
T Consensus 457 i~~d~~g---~lwigt~-~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~ 525 (795)
T 4a2l_A 457 ILPDGEG---NLWLGTL-SALVRFNPEQRS---FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQE 525 (795)
T ss_dssp EEECSSS---CEEEEES-SCEEEEETTTTE---EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEE
T ss_pred EEECCCC---CEEEEec-CceeEEeCCCCe---EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCC
Confidence 8877776 3555555 458889987653 222221 11236789999999998777654 457777754
No 237
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.11 E-value=3.4e-06 Score=81.07 Aligned_cols=312 Identities=10% Similarity=0.032 Sum_probs=183.1
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeec--ccCCcccceEEEEEEEcCCCCcEEEEeecCCeE
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSY--VDEDKEESFYTVSWACNVDGIPFLVAGGINGII 110 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i 110 (394)
...|.++...+ ++.+++....+++.+||..+++........ ...-....|.++... ++|. |..|..+ -|
T Consensus 214 ~~~i~~i~~d~----~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d--~~g~--lWigt~~-Gl 284 (795)
T 4a2l_A 214 TKQIQAILQQS----PTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMD--SQNR--LWIGTFN-DL 284 (795)
T ss_dssp CCCEEEEEEEE----TTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEEC--TTSC--EEEEESS-CE
T ss_pred CCeeEEEEEcC----CCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEc--CCCC--EEEEeCC-hh
Confidence 45688888876 678887766677999997776543222110 001123567777654 7886 5555555 58
Q ss_pred EEEECCCCeeEEEEEe-------cCCceeEEEEcCCCCcEEEEc-eeeeEEeec--------------------cceeee
Q 016185 111 RVIDVSNEKLHKSFVG-------HGDSINEIRTQPLKPSLVVSA-SKVIIISSL--------------------SLICLL 162 (394)
Q Consensus 111 ~vwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~-~~~i~~~~~--------------------~~~~~~ 162 (394)
.+||..+++....... ....|.++...+ ++.+.+.. ..-+..++. .+.++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~ 363 (795)
T 4a2l_A 285 NIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIV 363 (795)
T ss_dssp EEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEE
T ss_pred heEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEE
Confidence 8899877654332211 235688998888 44444332 222222211 123333
Q ss_pred eeeccceeeeccCCcEEEEEecCCcEEEEeecc-----CCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeec
Q 016185 163 LFIRSNCLRVGQDESVRLWNVQTGICILIFAGA-----GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 163 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 237 (394)
...++++-+|+.++-|..||..+++........ .-....|.++...+ ++.+|..|+.++-|..||..+++...-
T Consensus 364 ~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 364 EDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp ECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred ECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 445678889998888999998776654332110 01246799999887 776466777777799999877431100
Q ss_pred cccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc----cC
Q 016185 238 KSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY----PV 312 (394)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~----~~ 312 (394)
.. . ........|.++..+ ...|..|+. +-+.+||..+++.. ..... ..
T Consensus 443 ~~---------------~----~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~-------~~~~~~~~~~~ 495 (795)
T 4a2l_A 443 NQ---------------R----NSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFT-------TIEKEKDGTPV 495 (795)
T ss_dssp CT---------------T----TSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEE-------ECCBCTTCCBC
T ss_pred ec---------------C----CCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEE-------Ecccccccccc
Confidence 00 0 000234567888776 334444555 45888887765310 11110 11
Q ss_pred CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec-----cCCccCCeeEEEeccCCCEEEEeccCCeEE
Q 016185 313 PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS-----HAQSKSPIRQTAMSYDGSTILSCCEDGAIW 387 (394)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~ 387 (394)
....|.++...+++ .+..|+. +-|..||..++. . .+. .......|.++..+++|.+.+++. . -|.
T Consensus 496 ~~~~i~~i~~d~~g---~lWigt~-~Gl~~~~~~~~~--~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~ 565 (795)
T 4a2l_A 496 VSKQITTLFRDSHK---RLWIGGE-EGLSVFKQEGLD--I--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFY 565 (795)
T ss_dssp CCCCEEEEEECTTC---CEEEEES-SCEEEEEEETTE--E--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEE
T ss_pred CCceEEEEEECCCC---CEEEEeC-CceEEEeCCCCe--E--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-Cce
Confidence 23568888888777 3555555 558899987763 2 221 112345789999999998776554 3 467
Q ss_pred EEEcC
Q 016185 388 RWDAI 392 (394)
Q Consensus 388 iwd~~ 392 (394)
.||..
T Consensus 566 ~~d~~ 570 (795)
T 4a2l_A 566 CFNEK 570 (795)
T ss_dssp EEETT
T ss_pred eECCC
Confidence 77754
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=8.2e-07 Score=73.24 Aligned_cols=226 Identities=6% Similarity=-0.112 Sum_probs=133.4
Q ss_pred EEEEeecCCeEEEEECCCCee-----EEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeecc
Q 016185 100 FLVAGGINGIIRVIDVSNEKL-----HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
+|+.+.. +.|+.+++..... ...+......+..++|+++++.++++...
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~------------------------- 56 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS------------------------- 56 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT-------------------------
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC-------------------------
Confidence 4444443 4788888765432 11222223457899999866666667666
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 254 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (394)
++.|.++++..+.....+. ........++++|.++.++++-...+.|.++++.....
T Consensus 57 ~~~I~~~~~~g~~~~~~~~---~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-------------------- 113 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIR---QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-------------------- 113 (267)
T ss_dssp TTEEEEEESSSCCCEEEEC---TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--------------------
T ss_pred CCEEEEEecCCCCcEEEEE---CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--------------------
Confidence 7899999987655433332 22356789999983456666666778999999865210
Q ss_pred ccceeeeecCCCceEEEEEe--CcEEEEeec---CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcc
Q 016185 255 QFPVFIASVHSNYVDCNRWL--GDFILSKSV---DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYN 329 (394)
Q Consensus 255 ~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 329 (394)
.............++++ +..++.+.. .+.|..+++..... ..+. .........+++++++. .
T Consensus 114 ---~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-------~~~~--~~~~~~P~gia~d~~~~-~ 180 (267)
T 1npe_A 114 ---RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-------RILA--QDNLGLPNGLTFDAFSS-Q 180 (267)
T ss_dssp ---EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-------EEEE--CTTCSCEEEEEEETTTT-E
T ss_pred ---EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-------EEEE--ECCCCCCcEEEEcCCCC-E
Confidence 01111112345677776 445544443 46888888764321 1111 11223567899999764 4
Q ss_pred eEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 330 AAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 330 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
++++-...+.|.++|+.... ....+. . ......++.. ++.++++...++.|.++|..+
T Consensus 181 lyv~d~~~~~I~~~~~~g~~--~~~~~~--~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 181 LCWVDAGTHRAECLNPAQPG--RRKVLE--G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp EEEEETTTTEEEEEETTEEE--EEEEEE--C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred EEEEECCCCEEEEEecCCCc--eEEEec--C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 55566667899999987542 122222 1 1334567664 334444444568899998753
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.07 E-value=7.3e-08 Score=78.20 Aligned_cols=193 Identities=10% Similarity=0.007 Sum_probs=127.5
Q ss_pred EEEEEEEcCCCCcEEEEeec--CCeEEEEECCCCeeEEEEEecCC-ceeEEEEcCCCCcEEEEceeeeEEeeccceeeee
Q 016185 87 YTVSWACNVDGIPFLVAGGI--NGIIRVIDVSNEKLHKSFVGHGD-SINEIRTQPLKPSLVVSASKVIIISSLSLICLLL 163 (394)
Q Consensus 87 ~~~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~ 163 (394)
..+.++ +++. +.++.+. ++.|.++|+.+++.+.++.-... ....+++. +..+.++.-.
T Consensus 24 ~Gl~~~--~dg~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~-------------- 84 (266)
T 2iwa_A 24 QGLVYA--ENDT-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL-------------- 84 (266)
T ss_dssp EEEEEC--STTE-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT--------------
T ss_pred ccEEEe--CCCe-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec--------------
Confidence 456666 8775 4444432 68999999999999988763222 22345555 3355555555
Q ss_pred eeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccC
Q 016185 164 FIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWT 243 (394)
Q Consensus 164 ~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 243 (394)
++.+.++|..+.+.+..+.. + ... ...+.+ ++..++++..++.|.++|..+.+.
T Consensus 85 -----------~~~v~viD~~t~~v~~~i~~--g-~~~--g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v--------- 138 (266)
T 2iwa_A 85 -----------KNIGFIYDRRTLSNIKNFTH--Q-MKD--GWGLAT-DGKILYGSDGTSILYEIDPHTFKL--------- 138 (266)
T ss_dssp -----------CSEEEEEETTTTEEEEEEEC--C-SSS--CCEEEE-CSSSEEEECSSSEEEEECTTTCCE---------
T ss_pred -----------CCEEEEEECCCCcEEEEEEC--C-CCC--eEEEEE-CCCEEEEECCCCeEEEEECCCCcE---------
Confidence 89999999999999998873 2 111 123445 555566666789999999988442
Q ss_pred CCCCCCCccccccceeeeec--CC---CceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC-----
Q 016185 244 DLPSKFPTKYVQFPVFIASV--HS---NYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV----- 312 (394)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~--~~---~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~----- 312 (394)
+..+.. .. ..+..+.|. +...+....++.|.+.|..+++. +..+..
T Consensus 139 --------------~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V---------~~~I~~~g~~~ 195 (266)
T 2iwa_A 139 --------------IKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTL---------LGWILLPNLRK 195 (266)
T ss_dssp --------------EEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCE---------EEEEECHHHHH
T ss_pred --------------EEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcE---------EEEEECCCccc
Confidence 222221 11 124566665 54444444688999999998862 222221
Q ss_pred --------CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 313 --------PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 313 --------~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
.....+.++|+|+++ .+++++...+.|.+.++...
T Consensus 196 ~~~~~~~~~~~v~nGIa~~~~~~-~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 196 KLIDEGFRDIDVLNGIAWDQENK-RIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHTTCTTCCCEEEEEEETTTT-EEEEEETTCSEEEEEEEEEC
T ss_pred ccccccccccCceEEEEEcCCCC-EEEEECCCCCeEEEEEEecc
Confidence 123568999999986 68888888999999998775
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=2.1e-07 Score=75.51 Aligned_cols=208 Identities=10% Similarity=-0.025 Sum_probs=135.0
Q ss_pred eeEEEEEecCC--ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccC
Q 016185 119 KLHKSFVGHGD--SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG 196 (394)
Q Consensus 119 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~ 196 (394)
+.+.++. |.. ....+.|++ ++.++++.+. -.++.|.++|+.+++.+..+..
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~-dg~Lyvstg~-----------------------~~~s~v~~iD~~tg~v~~~i~l-- 62 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAE-NDTLFESTGL-----------------------YGRSSVRQVALQTGKVENIHKM-- 62 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECS-TTEEEEEECS-----------------------TTTCEEEEEETTTCCEEEEEEC--
T ss_pred eEEEEEE-CCCCCCcccEEEeC-CCeEEEECCC-----------------------CCCCEEEEEECCCCCEEEEEec--
Confidence 4556665 443 357899998 4555555431 0047899999999999988762
Q ss_pred CCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCc
Q 016185 197 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGD 276 (394)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 276 (394)
+.......+++. ++.+.++.-.++.+.++|..+.+. +..+......-..++++++
T Consensus 63 ~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v-----------------------~~~i~~g~~~g~glt~Dg~ 117 (266)
T 2iwa_A 63 DDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN-----------------------IKNFTHQMKDGWGLATDGK 117 (266)
T ss_dssp CTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE-----------------------EEEEECCSSSCCEEEECSS
T ss_pred CCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE-----------------------EEEEECCCCCeEEEEECCC
Confidence 122223456665 446666777889999999998442 3333221122245777777
Q ss_pred EEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC-----CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCce
Q 016185 277 FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP-----ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV 351 (394)
Q Consensus 277 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 351 (394)
.++++..++.|.++|..+.+ .+..+... -..++.+.|. ++ .+++....++.|.+.|..+++
T Consensus 118 ~l~vs~gs~~l~viD~~t~~---------v~~~I~Vg~~~~p~~~~nele~~-dg--~lyvn~~~~~~V~vID~~tg~-- 183 (266)
T 2iwa_A 118 ILYGSDGTSILYEIDPHTFK---------LIKKHNVKYNGHRVIRLNELEYI-NG--EVWANIWQTDCIARISAKDGT-- 183 (266)
T ss_dssp SEEEECSSSEEEEECTTTCC---------EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTSSEEEEEETTTCC--
T ss_pred EEEEECCCCeEEEEECCCCc---------EEEEEEECCCCcccccceeEEEE-CC--EEEEecCCCCeEEEEECCCCc--
Confidence 66666678999999998875 23333221 1236678887 66 455555568899999999985
Q ss_pred eeEEeccCC-----------ccCCeeEEEeccCCCE-EEEeccCCeEEEEEcC
Q 016185 352 LIARLSHAQ-----------SKSPIRQTAMSYDGST-ILSCCEDGAIWRWDAI 392 (394)
Q Consensus 352 ~~~~~~~~~-----------~~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~ 392 (394)
.+..+...+ .....+.++|+|+++. ++++...+.+++-++.
T Consensus 184 V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 184 LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 444444211 1135689999999865 5556677888888764
No 241
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.03 E-value=2.1e-07 Score=74.53 Aligned_cols=192 Identities=8% Similarity=0.036 Sum_probs=126.6
Q ss_pred eeEEEEEecCCc--eeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCC--cEEEEEecCCcEEEEeec
Q 016185 119 KLHKSFVGHGDS--INEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDE--SVRLWNVQTGICILIFAG 194 (394)
Q Consensus 119 ~~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~~ 194 (394)
+.++++. |... ...+.|+ ++.++.+.+. +| .|+++|+.+++.+..+..
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~--~~~LyestG~-------------------------~g~S~v~~vD~~Tgkv~~~~~l 83 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR--NGYFYESTGL-------------------------NGRSSIRKVDIESGKTLQQIEL 83 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE--TTEEEEEEEE-------------------------TTEEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEec-CCCCcccceEEEE--CCEEEEECCC-------------------------CCCceEEEEECCCCcEEEEEec
Confidence 3556664 5433 4788887 3477777776 76 899999999999988872
Q ss_pred cCCCcccE--EEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEE
Q 016185 195 AGGHRNEV--LSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNR 272 (394)
Q Consensus 195 ~~~~~~~i--~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 272 (394)
.... ..++.. ++.+.+..-.++.+.+||..+.+ .+..+.... .-..++
T Consensus 84 ----~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~-----------------------~~~ti~~~~-eG~glt 133 (262)
T 3nol_A 84 ----GKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLR-----------------------QVRSFNYDG-EGWGLT 133 (262)
T ss_dssp ----CTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCC-----------------------EEEEEECSS-CCCCEE
T ss_pred ----CCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCc-----------------------EEEEEECCC-CceEEe
Confidence 2222 345554 44556666678999999999844 233443322 235666
Q ss_pred EeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC-----CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecC
Q 016185 273 WLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP-----ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 273 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
++++.++.+..++.|.++|..+.+ .+.++... -..++.+.+. ++ .+.+..-.++.|.+.|..+
T Consensus 134 ~dg~~L~~SdGs~~i~~iDp~T~~---------v~~~I~V~~~g~~~~~lNELe~~-~G--~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 134 HNDQYLIMSDGTPVLRFLDPESLT---------PVRTITVTAHGEELPELNELEWV-DG--EIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp ECSSCEEECCSSSEEEEECTTTCS---------EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTSSEEEEECTTT
T ss_pred cCCCEEEEECCCCeEEEEcCCCCe---------EEEEEEeccCCccccccceeEEE-CC--EEEEEEccCCeEEEEECCC
Confidence 777777776678899999999876 33333321 1334567776 56 4555555688999999999
Q ss_pred CCceeeEEeccCC----------ccCCeeEEEeccCCCEEEEecc
Q 016185 348 SPPVLIARLSHAQ----------SKSPIRQTAMSYDGSTILSCCE 382 (394)
Q Consensus 348 ~~~~~~~~~~~~~----------~~~~v~~~~~s~~~~~l~s~~~ 382 (394)
++ .+..+...+ .....+.|||+|+++.|...+.
T Consensus 202 G~--V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 202 GK--VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CB--EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred Cc--EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 85 344443211 1245689999999887777664
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.01 E-value=7e-08 Score=86.45 Aligned_cols=276 Identities=11% Similarity=0.089 Sum_probs=166.4
Q ss_pred EEEecCCc-EEEEEcCCCceeEEeeecccC------------------------------C----cccceEEEEEEE---
Q 016185 52 FATVGGNR-VTVYQCLEGGVIAALQSYVDE------------------------------D----KEESFYTVSWAC--- 93 (394)
Q Consensus 52 las~~~d~-i~vw~~~~~~~~~~~~~~~~~------------------------------~----~~~~v~~~~~~~--- 93 (394)
|.||+..+ ++|+-+.+++.++.+..|... + ..+.......++
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 55566666 999999998888887766422 0 012223345553
Q ss_pred cCCCCcEEEEeecCCeEEEEECCCCeeEEEEEe-cCCceeEEEE-c-CCCCcEEEEceeeeEEeeccceeeeeeecccee
Q 016185 94 NVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-HGDSINEIRT-Q-PLKPSLVVSASKVIIISSLSLICLLLFIRSNCL 170 (394)
Q Consensus 94 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~ 170 (394)
.+||+.+.++...++.|.+.|+.+.++.+.+.- .......+++ + | ++.+++.++..-. =+..+...+.
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~--------p~~~dg~~l~ 168 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDET--------PLVNDGTNME 168 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCE--------ESSCSSSSTT
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecC-CCcEEEEeccccc--------ccCCCCcccc
Confidence 247884444555677899999999998886542 2345788887 4 7 5566666542000 0000011111
Q ss_pred e-eccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCC---------------cEEEEEccccce
Q 016185 171 R-VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN---------------TVKIWSMKEFWT 234 (394)
Q Consensus 171 ~-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg---------------~v~iwd~~~~~~ 234 (394)
. .-.++.+.+.|..+.+....+.. ......++++| +++++++.+.+. .|.+.|......
T Consensus 169 ~~~~~~~~vtvID~~t~~v~~qI~V----gg~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 169 DVANYVNVFTAVDADKWEVAWQVLV----SGNLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp CGGGEEEEEEEEETTTTEEEEEEEE----SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred cccccCceEEEEECCCCeEEEEEEe----CCCccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 1 11267899999999988888773 12446688999 888887777653 355555444110
Q ss_pred eeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCC
Q 016185 235 YVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPE 314 (394)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 314 (394)
... .|++... +.|.+.|.++.+.. . .+..++..
T Consensus 244 -------------------------~v~-----------~Gk~~~i----~~V~VID~~~~~~~----~--~~~~Ipvg- 276 (595)
T 1fwx_A 244 -------------------------AIA-----------AGDYQEL----NGVKVVDGRKEASS----L--FTRYIPIA- 276 (595)
T ss_dssp -------------------------HHH-----------HTCSEEE----TTEEEEECSGGGCC----S--SEEEEEEE-
T ss_pred -------------------------ecc-----------CCCeeEE----CcEEEEeCcccCCc----e--eEEEEecC-
Confidence 000 0332222 45999999873200 0 12222221
Q ss_pred CCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc----------eeeEEeccCCccCCeeEEEeccCCCEEEEeccCC
Q 016185 315 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP----------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG 384 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 384 (394)
....++.++||++ ..++++..+.+|.++|+.+.+. .....++ -......++|+|+|...++.-.|+
T Consensus 277 ~~PhGv~~sPDGk-~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~---vG~gP~h~aF~~dG~aY~t~~lds 352 (595)
T 1fwx_A 277 NNPHGCNMAPDKK-HLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE---LGLGPLHTAFDGRGNAYTSLFLDS 352 (595)
T ss_dssp SSCCCEEECTTSS-EEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB---CCSCEEEEEECTTSEEEEEETTTT
T ss_pred CCceEEEEcCCCC-EEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC---CCCCcceEEECCCCeEEEEEecCC
Confidence 1334789999996 3566666889999999986420 1223333 125688899999995455667899
Q ss_pred eEEEEEcC
Q 016185 385 AIWRWDAI 392 (394)
Q Consensus 385 ~i~iwd~~ 392 (394)
.|.+||+.
T Consensus 353 qV~kwdi~ 360 (595)
T 1fwx_A 353 QVVKWNIE 360 (595)
T ss_dssp EEEEEEHH
T ss_pred cEEEEEhh
Confidence 99999975
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.01 E-value=1.2e-07 Score=88.76 Aligned_cols=298 Identities=13% Similarity=0.112 Sum_probs=158.1
Q ss_pred ceEEEEecCCcEEEEEcCCCceeEEeeecccCCcc-----cce-EEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEE
Q 016185 49 FNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKE-----ESF-YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHK 122 (394)
Q Consensus 49 ~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~-----~~v-~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 122 (394)
+.+++....+.|.-+|..+|+.+-........... ..+ ..+++ .+. .++.++.|+.|..+|..+++.+.
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~v~v~~~dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL----WGD-KVYVGTLDGRLIALDAKTGKAIW 141 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE----EBT-EEEEECTTSEEEEEETTTCCEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE----ECC-EEEEEcCCCEEEEEECCCCCEee
Confidence 45555544444999999999887665422110000 000 11122 234 68888899999999999999998
Q ss_pred EEEecCCc-eeEEEEcC--CCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCc
Q 016185 123 SFVGHGDS-INEIRTQP--LKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHR 199 (394)
Q Consensus 123 ~~~~~~~~-v~~~~~~~--~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 199 (394)
++...... ...+.-.| .++ .++.+.. ... .+.++.|..+|.++|+.+..+....+..
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~----------------~~~---~~~~g~v~a~D~~tG~~~W~~~~~~~~p 201 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVVKG-KVIIGNG----------------GAE---YGVRGFVSAYDADTGKLAWRFYTVPGDP 201 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEETT-EEEECCB----------------CTT---TCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred eeccCCCCCcceecCCCEEECC-EEEEeCC----------------CCC---cCCCCEEEEEECCCCcEEEEecccCCCC
Confidence 88743110 00000011 022 2222221 000 0015899999999999988876311110
Q ss_pred ----------------------------ccEEEEEecCCCCeeEEeeccCC-------------------cEEEEEcccc
Q 016185 200 ----------------------------NEVLSVDFHPSDIYRIASCGMDN-------------------TVKIWSMKEF 232 (394)
Q Consensus 200 ----------------------------~~i~~~~~~~~~~~~l~s~~~dg-------------------~v~iwd~~~~ 232 (394)
.....++++| +..+++.++.++ .|..+|.+++
T Consensus 202 ~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG 280 (668)
T 1kv9_A 202 ALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG 280 (668)
T ss_dssp TSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC
T ss_pred CccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC
Confidence 0112467777 666777777665 3888898886
Q ss_pred ceeeccccccCCCCCCCCccccccceeeeecCCCc--eEEEEEeCc---EEEEeecCCeEEEecCCCCCCCCCCCc----
Q 016185 233 WTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNY--VDCNRWLGD---FILSKSVDNEIVLWEPKMKEQSPGEGT---- 303 (394)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~---- 303 (394)
+..-.....-.. ..... .... +..+.++|+ .++.++.+|.+.++|..+++.......
T Consensus 281 ~~~W~~~~~~~~-------------~wd~~-~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~ 346 (668)
T 1kv9_A 281 KLAWHYQVTPGD-------------SWDFT-ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVT 346 (668)
T ss_dssp CEEEEEESSTTC-------------CSCCC-CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCC
T ss_pred ceeeEeecCCCc-------------ccccc-CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccc
Confidence 542221110000 00000 0011 122334454 688999999999999998874200000
Q ss_pred ---------ceecc--c----------ccCCC--CCeEEEEEeecCCcceEEE---------------------------
Q 016185 304 ---------ADILQ--K----------YPVPE--CDIWFIKFSCDFHYNAAAI--------------------------- 333 (394)
Q Consensus 304 ---------~~~~~--~----------~~~~~--~~i~~~~~~~~~~~~~l~~--------------------------- 333 (394)
...+. . .+... ..-..++++|+.. +++.
T Consensus 347 w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g--~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~ 424 (668)
T 1kv9_A 347 WAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG--LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAG 424 (668)
T ss_dssp SEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT--EEEEEEEECCEEECCCGGGCCCCSSCCCSSC
T ss_pred cccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC--EEEEeccccceEeeeeccccccccccccCcc
Confidence 00000 0 00000 0001256666653 3322
Q ss_pred ---------EeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 334 ---------GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 334 ---------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
...+|.|..||+.+++ .+.+.+.. .+.....+...+.+++.++.||.|+.||.++
T Consensus 425 ~~~~~~~p~~~~~g~l~A~D~~tG~--~~W~~~~~---~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 425 FADATDVPAAVVSGALLAWDPVKQK--AAWKVPYP---THWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp GGGCCCCCGGGCEEEEEEEETTTTE--EEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred ccccCCCCCCCccceEEEEeCCCCc--EEEEccCC---CCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 1134889999999985 33333311 2233334445678899999999999999864
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.00 E-value=5.4e-08 Score=83.05 Aligned_cols=217 Identities=12% Similarity=0.025 Sum_probs=132.5
Q ss_pred ceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecC
Q 016185 49 FNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHG 128 (394)
Q Consensus 49 ~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 128 (394)
+.+++....+++..+|.. ++....... ....+..+... +++. ++.++.++.|..+|.. ++....+....
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~-----~~~~~~~~~~~--~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKT-----KKAIYATPIVS--EDGT--IYVGSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEEC-----SSCCCSCCEEC--TTSC--EEEECTTSEEEEECTT-SCEEEEEECSS
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcC-----CCceeeeeEEc--CCCE--EEEEcCCCEEEEECCC-CCEeEEEecCC
Confidence 555554444559999987 665444431 22233333333 5675 6677888999999988 87777776555
Q ss_pred CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEec
Q 016185 129 DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH 208 (394)
Q Consensus 129 ~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~ 208 (394)
..+.++...+ ++.+++.. +.|..+| .+++....+. .....+.++...
T Consensus 177 ~~~~~~~~d~-~g~l~v~t----------------------------~~l~~~d-~~g~~~~~~~---~~~~~~~~~~~~ 223 (330)
T 3hxj_A 177 AITSAASIGK-DGTIYFGS----------------------------DKVYAIN-PDGTEKWNFY---AGYWTVTRPAIS 223 (330)
T ss_dssp CCCSCCEECT-TCCEEEES----------------------------SSEEEEC-TTSCEEEEEC---CSSCCCSCCEEC
T ss_pred CceeeeEEcC-CCEEEEEe----------------------------CEEEEEC-CCCcEEEEEc---cCCcceeceEEC
Confidence 5566666655 44444332 4688888 6777766665 344667788888
Q ss_pred CCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeE
Q 016185 209 PSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEI 287 (394)
Q Consensus 209 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i 287 (394)
+ ++. +..++.++.+..+|... +. +.........+.++..+ +..+..++.+|.|
T Consensus 224 ~-~g~-l~v~t~~~gl~~~~~~g-~~-----------------------~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl 277 (330)
T 3hxj_A 224 E-DGT-IYVTSLDGHLYAINPDG-TE-----------------------KWRFKTGKRIESSPVIGNTDTIYFGSYDGHL 277 (330)
T ss_dssp T-TSC-EEEEETTTEEEEECTTS-CE-----------------------EEEEECSSCCCSCCEECTTSCEEEECTTCEE
T ss_pred C-CCe-EEEEcCCCeEEEECCCC-CE-----------------------eEEeeCCCCccccceEcCCCeEEEecCCCCE
Confidence 7 665 56666778888887533 11 11222222223334444 5677788888899
Q ss_pred EEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 288 VLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 288 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
..+|. +++ .+..+......+.++...+++ .|..++.+|.+++......
T Consensus 278 ~~~d~-~g~---------~~~~~~~~~~~~~~~~~d~~g---~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 278 YAINP-DGT---------EKWNFETGSWIIATPVIDENG---TIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp EEECT-TSC---------EEEEEECSSCCCSCCEECTTC---CEEEECTTSCEEEEEC---
T ss_pred EEECC-CCc---------EEEEEEcCCccccceEEcCCC---EEEEEcCCCeEEEEecccc
Confidence 99996 443 223333334445566666666 5778999999998877654
No 245
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.98 E-value=3.1e-06 Score=81.21 Aligned_cols=314 Identities=9% Similarity=-0.045 Sum_probs=174.2
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecc--cCCcccceEEEEEEEcCCCCcEEEEeecCCeEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYV--DEDKEESFYTVSWACNVDGIPFLVAGGINGIIR 111 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~ 111 (394)
..|.++...+ ++.+++.... ++.+||..+++......... .......|.++... ++|. |..|...+-|.
T Consensus 211 ~~i~~i~~d~----~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d--~~g~--lWigt~~~Gl~ 281 (781)
T 3v9f_A 211 NDVRCIYKDT----NGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQL--KDNK--LWIATELNGIM 281 (781)
T ss_dssp SSEEEEEECT----TCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEEC--TTSE--EEEEESSSCEE
T ss_pred CceeEEEEcC----CCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEEC--CCCC--EEEEeCCCCeE
Confidence 4577777665 6777776654 89999977665322211100 00123457666554 7775 66677656688
Q ss_pred EEECCCCeeEEEEE--------------ecCCceeEEEEcCCCCcEEEEc-eeeeEEeec--------------------
Q 016185 112 VIDVSNEKLHKSFV--------------GHGDSINEIRTQPLKPSLVVSA-SKVIIISSL-------------------- 156 (394)
Q Consensus 112 vwd~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~l~s~-~~~i~~~~~-------------------- 156 (394)
++|..+++...... -....|.++...+ ++.+.+.. ..-+..++.
T Consensus 282 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l 360 (781)
T 3v9f_A 282 ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSL 360 (781)
T ss_dssp EEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCC
T ss_pred EECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCC
Confidence 89987665322111 1235688888887 44443332 222221111
Q ss_pred ---cceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccc
Q 016185 157 ---SLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 157 ---~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
.+.++....++.+.+|+.++-|..||..+++..............|.++...+ ++. |..|+.++-+..+|..+.+
T Consensus 361 ~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 361 SNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS-EGN-LWFGTYLGNISYYNTRLKK 438 (781)
T ss_dssp SSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT-TSC-EEEEETTEEEEEECSSSCE
T ss_pred CCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC-CCC-EEEEeccCCEEEEcCCCCc
Confidence 12233333457888888788899999765433221110012346799999887 666 5556766778889887632
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV 312 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~ 312 (394)
... ..........|.++..+ ...+..++. +-|..||..+++... .........
T Consensus 439 ~~~---------------------~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~----~~~~~~~~~ 492 (781)
T 3v9f_A 439 FQI---------------------IELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIH----HYDTSNSQL 492 (781)
T ss_dssp EEE---------------------CCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCE----EECTTTSSC
T ss_pred EEE---------------------eccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEe----cccCccccc
Confidence 100 00001234567888777 445666665 568889887654210 000000011
Q ss_pred CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec--cCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 313 PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS--HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
....|.++...+++ .|..|+.++-|..||..+++ ...+. ..-....|.++...++|.+.++.. +|.|..||
T Consensus 493 ~~~~i~~i~~d~~g---~lWigt~~~Gl~~~~~~~~~---~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 493 LENFVRSIAQDSEG---RFWIGTFGGGVGIYTPDMQL---VRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp SCSCEEEEEECTTC---CEEEEESSSCEEEECTTCCE---EEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred ccceeEEEEEcCCC---CEEEEEcCCCEEEEeCCCCe---EEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 23568888887777 46666664457788876652 33332 112245789999999988777654 66657776
Q ss_pred cC
Q 016185 391 AI 392 (394)
Q Consensus 391 ~~ 392 (394)
..
T Consensus 566 ~~ 567 (781)
T 3v9f_A 566 AR 567 (781)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 246
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.97 E-value=3.4e-07 Score=79.19 Aligned_cols=182 Identities=10% Similarity=0.104 Sum_probs=111.3
Q ss_pred CCcEEEEEecCC----cEEEEeec--c--CCCcccEEEEEecCCCCeeEEeeccC------CcEEEEEccccceeecccc
Q 016185 175 DESVRLWNVQTG----ICILIFAG--A--GGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 175 d~~i~vwd~~~~----~~~~~~~~--~--~~~~~~i~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~ 240 (394)
++.|.++|+.+. +..+.+.. . +........+...| ++ +++++..+ |.+.++|..+.+.
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v------ 176 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEP------ 176 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCE------
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeE------
Confidence 899999998755 55555520 0 00122456678889 88 66766655 7899999998442
Q ss_pred ccCCCCCCCCccccccceeeeecC--C-CceEEEEEe--CcEEEEee-------------------cCCeEEEecCCCCC
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVH--S-NYVDCNRWL--GDFILSKS-------------------VDNEIVLWEPKMKE 296 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~--~-~~i~~~~~~--~~~l~~~~-------------------~dg~i~~~d~~~~~ 296 (394)
+..+... . ..-..+.|+ ++.+++.. .+.+|.+||+.+.+
T Consensus 177 -----------------~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 177 -----------------LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp -----------------EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred -----------------EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 2222211 1 112234444 66777764 37899999998764
Q ss_pred CCCCCCcceecccccCC--CCCeEEEEE--eecCCcceEEEEe------CCCcEEEEEecCCCceeeEEeccCC------
Q 016185 297 QSPGEGTADILQKYPVP--ECDIWFIKF--SCDFHYNAAAIGN------REGKIFVWELQSSPPVLIARLSHAQ------ 360 (394)
Q Consensus 297 ~~~~~~~~~~~~~~~~~--~~~i~~~~~--~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~------ 360 (394)
.+.++... ......+.| +|+++ ++++++ .+++|.+|....++......+....
T Consensus 240 ---------~~~tI~vg~~g~~P~~i~f~~~Pdg~--~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~ 308 (462)
T 2ece_A 240 ---------RIHSLTLGEENRMALELRPLHDPTKL--MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGN 308 (462)
T ss_dssp ---------EEEEEESCTTEEEEEEEEECSSTTCC--EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSS
T ss_pred ---------EeeEEecCCCCCccceeEeeECCCCC--EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccc
Confidence 34444432 123345556 88884 555554 5678888877654322222221000
Q ss_pred ----------ccCCeeEEEeccCCCEEEEec-cCCeEEEEEcC
Q 016185 361 ----------SKSPIRQTAMSYDGSTILSCC-EDGAIWRWDAI 392 (394)
Q Consensus 361 ----------~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~ 392 (394)
-...+..|.+||||++|.++. ..+.|.+||+.
T Consensus 309 lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 309 LPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred ccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 024578899999999998776 46899999985
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.96 E-value=4e-07 Score=72.96 Aligned_cols=180 Identities=18% Similarity=0.204 Sum_probs=110.2
Q ss_pred CCCcEEEEeecCC--eEEEEECCCCeeEEEEEecCCcee--EEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceee
Q 016185 96 DGIPFLVAGGING--IIRVIDVSNEKLHKSFVGHGDSIN--EIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLR 171 (394)
Q Consensus 96 ~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~ 171 (394)
++. +..+.+.+| .|+++|+++++.++++.... ... .++.. +..+.+..-.
T Consensus 52 ~~~-LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~--g~~ly~ltw~---------------------- 105 (262)
T 3nol_A 52 NGY-FYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDW--KDKIVGLTWK---------------------- 105 (262)
T ss_dssp TTE-EEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEE--TTEEEEEESS----------------------
T ss_pred CCE-EEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEe--CCEEEEEEee----------------------
Confidence 455 667777766 89999999999998887433 232 34443 3455555555
Q ss_pred eccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCc
Q 016185 172 VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPT 251 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 251 (394)
++.+.+||..+.+.+..+.. ...-..++ + ++..|+.+..++.|.++|..+.+.
T Consensus 106 ---~~~v~v~D~~t~~~~~ti~~----~~eG~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v----------------- 158 (262)
T 3nol_A 106 ---NGLGFVWNIRNLRQVRSFNY----DGEGWGLT--H-NDQYLIMSDGTPVLRFLDPESLTP----------------- 158 (262)
T ss_dssp ---SSEEEEEETTTCCEEEEEEC----SSCCCCEE--E-CSSCEEECCSSSEEEEECTTTCSE-----------------
T ss_pred ---CCEEEEEECccCcEEEEEEC----CCCceEEe--c-CCCEEEEECCCCeEEEEcCCCCeE-----------------
Confidence 89999999999999999983 22223444 4 455555555678899999998442
Q ss_pred cccccceeeeec--CC---CceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccc---ccCCCCCeEEEEE
Q 016185 252 KYVQFPVFIASV--HS---NYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK---YPVPECDIWFIKF 322 (394)
Q Consensus 252 ~~~~~~~~~~~~--~~---~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~ 322 (394)
+..+.. .. ..+..+.|. |...+..-.++.|.+.|.++++.........+... ......-.+.|+|
T Consensus 159 ------~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~ 232 (262)
T 3nol_A 159 ------VRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAW 232 (262)
T ss_dssp ------EEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEE
T ss_pred ------EEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEE
Confidence 222221 11 223445665 55444444688999999998863111100000000 0112245689999
Q ss_pred eecCCcceEEEEe
Q 016185 323 SCDFHYNAAAIGN 335 (394)
Q Consensus 323 ~~~~~~~~l~~~~ 335 (394)
+|+.+ +++++|-
T Consensus 233 dp~~~-~lfVTGK 244 (262)
T 3nol_A 233 DKEHH-RLFVTGK 244 (262)
T ss_dssp ETTTT-EEEEEET
T ss_pred cCCCC-EEEEECC
Confidence 99985 4555554
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.93 E-value=7.7e-06 Score=71.19 Aligned_cols=229 Identities=8% Similarity=-0.072 Sum_probs=138.4
Q ss_pred eEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCC
Q 016185 50 NVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD 129 (394)
Q Consensus 50 ~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 129 (394)
.+|+.+..+.|+..++........+. .......++|. +.+..++++-...+.|..+++........+.....
T Consensus 88 ~~l~~~~~~~I~~i~~~~~~~~~~~~------~~~~~~gl~~d--~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~ 159 (386)
T 3v65_B 88 PVLLFANRIDIRQVLPHRSEYTLLLN------NLENAIALDFH--HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE 159 (386)
T ss_dssp CEEEEECBSCEEEECTTSCCCEEEEC------SCSCEEEEEEE--TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS
T ss_pred ceeEeecCccceeeccCCCcEEEEec------CCCccEEEEEe--cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC
Confidence 34555555668888887665433333 12345667776 65553566666788999999876544333333333
Q ss_pred ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecC
Q 016185 130 SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP 209 (394)
Q Consensus 130 ~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 209 (394)
....+++.+.++.++++-.. .+.|.+.++........+. ........++++|
T Consensus 160 ~p~glavd~~~g~lY~~d~~-------------------------~~~I~~~~~dg~~~~~l~~---~~l~~P~giavdp 211 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSG-------------------------TSRIEVANLDGAHRKVLLW---QSLEKPRAIALHP 211 (386)
T ss_dssp CCCCEEEETTTTEEEEEETT-------------------------TTEEEECBTTSCSCEEEEC---SSCSCEEEEEEET
T ss_pred CccEEEEEeCCCeEEEEcCC-------------------------CCeEEEEeCCCCceEEeec---CCCCCCcEEEEEc
Confidence 45778888756667676666 7788888876444333333 2345678999998
Q ss_pred CCCeeEEeeccC-CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe---CcEEEEeecCC
Q 016185 210 SDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDN 285 (394)
Q Consensus 210 ~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg 285 (394)
.++.++++-... +.|..+++.... ........-.....++++ +.+.++-...+
T Consensus 212 ~~g~ly~td~~~~~~I~r~~~dG~~-----------------------~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~ 268 (386)
T 3v65_B 212 MEGTIYWTDWGNTPRIEASSMDGSG-----------------------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 268 (386)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCS-----------------------CEEEECSSCSCEEEEEEEGGGTEEEEEETTTT
T ss_pred CCCeEEEeccCCCCEEEEEeCCCCC-----------------------cEEEEECCCCCeeeEEEeCCCCEEEEEECCCC
Confidence 556666665555 778888876521 111112223345678886 44555556678
Q ss_pred eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 286 EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 286 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
.|..+|+..... . .+ ..........+++ ..+ .++++-...+.|..++..+++
T Consensus 269 ~I~~~d~dG~~~------~-~~--~~~~~~~P~giav-~~~--~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 269 VIERANLDGSHR------K-AV--ISQGLPHPFAITV-FED--SLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEEEECTTSCSC------E-EE--ECSSCSSEEEEEE-ETT--EEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEeCCCCee------E-EE--EECCCCCceEEEE-ECC--EEEEeeCCCCeEEEEECCCCc
Confidence 899999875321 0 11 1112234567777 344 466677778889888865553
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=8.1e-07 Score=71.18 Aligned_cols=192 Identities=6% Similarity=-0.036 Sum_probs=125.6
Q ss_pred eeEEEEEecCC--ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccC
Q 016185 119 KLHKSFVGHGD--SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAG 196 (394)
Q Consensus 119 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~ 196 (394)
+.++++. |.. ....+.|+. +.++.+.+. +|.|+++|+++++.+..+ .
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~--~~Ly~stG~-------------------------~g~v~~iD~~Tgkv~~~~-l-- 92 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ--GHFFESTGH-------------------------QGTLRQLSLESAQPVWME-R-- 92 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET--TEEEEEETT-------------------------TTEEEECCSSCSSCSEEE-E--
T ss_pred EEEEEEc-CCCccccceEEEEC--CEEEEEcCC-------------------------CCEEEEEECCCCcEEeEE-C--
Confidence 4555664 443 346888874 577777777 899999999999987776 2
Q ss_pred CCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCc
Q 016185 197 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGD 276 (394)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 276 (394)
.....-..+++. ++.+.+..-.++.+.+||..+.+. +..+... ..-+.++++++
T Consensus 93 ~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~-----------------------~~ti~~~-~eGwGLt~Dg~ 146 (268)
T 3nok_A 93 LGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQR-----------------------ERTTRYS-GEGWGLCYWNG 146 (268)
T ss_dssp CTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEE-----------------------EEEEECS-SCCCCEEEETT
T ss_pred CCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcE-----------------------EEEEeCC-CceeEEecCCC
Confidence 222222346665 445566666789999999999542 3344332 22356777888
Q ss_pred EEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC-----CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCce
Q 016185 277 FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP-----ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV 351 (394)
Q Consensus 277 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 351 (394)
.|+.+..++.|.++|..+.+ .+.++... -..++.+.|. ++ .+++....++.|.+.|..+++
T Consensus 147 ~L~vSdGs~~l~~iDp~T~~---------v~~~I~V~~~g~~v~~lNeLe~~-dG--~lyanvw~s~~I~vIDp~TG~-- 212 (268)
T 3nok_A 147 KLVRSDGGTMLTFHEPDGFA---------LVGAVQVKLRGQPVELINELECA-NG--VIYANIWHSSDVLEIDPATGT-- 212 (268)
T ss_dssp EEEEECSSSEEEEECTTTCC---------EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTCSEEEEECTTTCB--
T ss_pred EEEEECCCCEEEEEcCCCCe---------EEEEEEeCCCCcccccccccEEe-CC--EEEEEECCCCeEEEEeCCCCc--
Confidence 77777779999999999876 33333221 1245667776 56 455555568899999999985
Q ss_pred eeEEeccC-----------CccCCeeEEEeccCCCEEEEec
Q 016185 352 LIARLSHA-----------QSKSPIRQTAMSYDGSTILSCC 381 (394)
Q Consensus 352 ~~~~~~~~-----------~~~~~v~~~~~s~~~~~l~s~~ 381 (394)
.+..+... ......+.||++|+++.|...+
T Consensus 213 V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 213 VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 34443311 1224678999999876665554
No 250
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.91 E-value=1.5e-05 Score=68.32 Aligned_cols=241 Identities=8% Similarity=-0.078 Sum_probs=143.4
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
.+..+|.+..+ .+ +|..+....|+..++........+. .......++|. +....+.++-...+.|..
T Consensus 33 ~d~~~C~~~~~----~~-~ll~~~~~~I~~i~~~g~~~~~~~~------~~~~~~~l~~d--~~~~~ly~~D~~~~~I~r 99 (349)
T 3v64_C 33 PDRRSCKALGP----EP-VLLFANRIDIRQVLPHRSEYTLLLN------NLENAIALDFH--HRRELVFWSDVTLDRILR 99 (349)
T ss_dssp TTSSCEEESSS----CC-EEEEECBSCEEEECTTSCCEEEEEC------SCSCEEEEEEE--TTTTEEEEEETTTTEEEE
T ss_pred CCCCccccccc----Cc-eeEeecccceEEEeCCCCeeEEeec------CCCceEEEEEe--ccccEEEEEeccCCceEE
Confidence 34456666554 33 4444555558888876554433332 12235667776 665535556667889999
Q ss_pred EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEe
Q 016185 113 IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIF 192 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 192 (394)
+++........+.........+++.+.++.++++-.. .+.|.+.+++.......+
T Consensus 100 ~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~-------------------------~~~I~~~~~dG~~~~~l~ 154 (349)
T 3v64_C 100 ANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG-------------------------TSRIEVANLDGAHRKVLL 154 (349)
T ss_dssp EETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT-------------------------TTEEEEEETTSCSCEEEE
T ss_pred EecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC-------------------------CCeEEEEcCCCCceEEEE
Confidence 9987654433333333456788898756677777666 788999998654433333
Q ss_pred eccCCCcccEEEEEecCCCCeeEEeeccC-CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEE
Q 016185 193 AGAGGHRNEVLSVDFHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN 271 (394)
Q Consensus 193 ~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 271 (394)
. ........++++|.++.++++-... +.|..+++.... ........-.....+
T Consensus 155 ~---~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-----------------------~~~~~~~~~~~PnGl 208 (349)
T 3v64_C 155 W---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-----------------------RRIIADTHLFWPNGL 208 (349)
T ss_dssp C---TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-----------------------CEESCCSSCSCEEEE
T ss_pred e---CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-----------------------cEEEEECCCCCcceE
Confidence 2 2345678999998556666665555 778888876521 111111123345678
Q ss_pred EEe--Cc-EEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 272 RWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 272 ~~~--~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
+++ ++ +.++-...+.|..+|+..... . .+ ..........+++ ..+ .++++-...+.|..++..++
T Consensus 209 a~d~~~~~lY~aD~~~~~I~~~~~dG~~~------~-~~--~~~~~~~P~giav-~~~--~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 209 TIDYAGRRMYWVDAKHHVIERANLDGSHR------K-AV--ISQGLPHPFAITV-FED--SLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSC------E-EE--ECSSCSSEEEEEE-ETT--EEEEEETTTTEEEEEETTTC
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCce------E-EE--EeCCCCCceEEEE-ECC--EEEEecCCCCeEEEEEccCC
Confidence 886 33 455555678899999875421 0 11 1112234567777 344 46666667788888885554
Q ss_pred C
Q 016185 349 P 349 (394)
Q Consensus 349 ~ 349 (394)
+
T Consensus 277 ~ 277 (349)
T 3v64_C 277 K 277 (349)
T ss_dssp C
T ss_pred C
Confidence 3
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.91 E-value=1.6e-06 Score=68.82 Aligned_cols=194 Identities=10% Similarity=-0.025 Sum_probs=124.5
Q ss_pred eeEEEEEecCC--ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCC--cEEEEEecCCcEEEEeec
Q 016185 119 KLHKSFVGHGD--SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDE--SVRLWNVQTGICILIFAG 194 (394)
Q Consensus 119 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~--~i~vwd~~~~~~~~~~~~ 194 (394)
+.+.++. |.. ....+.|++ +.++.+.+. +| .|+++|+.+++.+..+..
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~--~~LyestG~-------------------------~g~S~v~~vD~~tgkv~~~~~l 61 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR--GHLYESTGE-------------------------TGRSSVRKVDLETGRILQRAEV 61 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET--TEEEEEECC-------------------------TTSCEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcC-CCCccccccEEEEC--CEEEEECCC-------------------------CCCceEEEEECCCCCEEEEEeC
Confidence 4556664 543 456888886 466666665 54 899999999999988863
Q ss_pred cCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe
Q 016185 195 AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL 274 (394)
Q Consensus 195 ~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 274 (394)
. ..-.-..+++. ++.+.+..-.++.+.+||..+.+ .+..+.... .-..++.+
T Consensus 62 ~--~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~-----------------------~~~ti~~~~-~Gwglt~d 113 (243)
T 3mbr_X 62 P--PPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT-----------------------PRARFRYPG-EGWALTSD 113 (243)
T ss_dssp C--TTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE-----------------------EEEEEECSS-CCCEEEEC
T ss_pred C--CCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc-----------------------EEEEEeCCC-CceEEeeC
Confidence 1 11112344554 45666666789999999999954 233443322 33567777
Q ss_pred CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCC-----CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 275 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP-----ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 275 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
++.|+.+..++.|.++|..+.+ .+.++... -..++.+.+. ++ .+++..-.+..|.+.|..+++
T Consensus 114 g~~L~vSdgs~~l~~iDp~t~~---------~~~~I~V~~~g~~~~~lNeLe~~-~G--~lyanvw~s~~I~vIDp~tG~ 181 (243)
T 3mbr_X 114 DSHLYMSDGTAVIRKLDPDTLQ---------QVGSIKVTAGGRPLDNLNELEWV-NG--ELLANVWLTSRIARIDPASGK 181 (243)
T ss_dssp SSCEEEECSSSEEEEECTTTCC---------EEEEEECEETTEECCCEEEEEEE-TT--EEEEEETTTTEEEEECTTTCB
T ss_pred CCEEEEECCCCeEEEEeCCCCe---------EEEEEEEccCCcccccceeeEEe-CC--EEEEEECCCCeEEEEECCCCC
Confidence 7766666679999999999876 33333321 1245566655 55 455555567899999999985
Q ss_pred ceeeEEeccC-----------CccCCeeEEEeccCCCEEEEecc
Q 016185 350 PVLIARLSHA-----------QSKSPIRQTAMSYDGSTILSCCE 382 (394)
Q Consensus 350 ~~~~~~~~~~-----------~~~~~v~~~~~s~~~~~l~s~~~ 382 (394)
.+..+... ......+.||++|+++.|...+.
T Consensus 182 --V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 182 --VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp --EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred --EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 34443311 12246789999998777766653
No 252
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.89 E-value=2.4e-05 Score=75.01 Aligned_cols=314 Identities=10% Similarity=-0.024 Sum_probs=174.5
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEee-------ec--ccCCcccceEEEEEEEcCCCCcEEEE
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQ-------SY--VDEDKEESFYTVSWACNVDGIPFLVA 103 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~~~~l~s 103 (394)
...|+++...+ +|.+.+....++|.+++..++....... .. ...-....|.++... ++|. |..
T Consensus 257 ~~~i~~i~~d~----~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D--~~g~--lWi 328 (781)
T 3v9f_A 257 SSYIFSIKQLK----DNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQD--SFNN--IWI 328 (781)
T ss_dssp CCCEEEEEECT----TSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEEC--SSCC--EEE
T ss_pred CceEEEEEECC----CCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEe--CCCC--EEE
Confidence 35688888765 6777776655789999987655322111 00 011234456666544 7776 777
Q ss_pred eecCCeEEEEECCCCeeEEEEE---------ecCCceeEEEEcCCCCcEEEEc-eeeeEEeec-----------------
Q 016185 104 GGINGIIRVIDVSNEKLHKSFV---------GHGDSINEIRTQPLKPSLVVSA-SKVIIISSL----------------- 156 (394)
Q Consensus 104 ~~~dg~i~vwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~l~s~-~~~i~~~~~----------------- 156 (394)
|..++-|..++..+.....-.. .....|.++...+ ++.+.+.. ..-+..++.
T Consensus 329 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 407 (781)
T 3v9f_A 329 GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDGGGINVFENGKRVAIYNKENRELLSN 407 (781)
T ss_dssp EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBSSCEEEEETTEEEEECC-----CCCS
T ss_pred EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCc
Confidence 8877788899876554322111 0235688888877 44444332 222222111
Q ss_pred cceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceee
Q 016185 157 SLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYV 236 (394)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~ 236 (394)
.+.++....++.+.+|+.++.|..+|..+++... +.........|.++...+ ++.+ ..|+. +-|..||..+.+...
T Consensus 408 ~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~-~~~~~~~~~~v~~i~~d~-~g~l-wigt~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 408 SVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQI-IELEKNELLDVRVFYEDK-NKKI-WIGTH-AGVFVIDLASKKVIH 483 (781)
T ss_dssp BEEEEEECTTSCEEEEETTEEEEEECSSSCEEEE-CCSTTTCCCCEEEEEECT-TSEE-EEEET-TEEEEEESSSSSCCE
T ss_pred ceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEE-eccCCCCCCeEEEEEECC-CCCE-EEEEC-CceEEEeCCCCeEEe
Confidence 1223333346788888877788899887665433 321011346799999887 6764 44444 458889887632100
Q ss_pred ccccccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecc-cccCCC
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQ-KYPVPE 314 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~ 314 (394)
... .. ........|.++..+ ...+..|+.++-+..||..+.+. .... ......
T Consensus 484 ~~~----------------~~--~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-------~~~~~~~~l~~ 538 (781)
T 3v9f_A 484 HYD----------------TS--NSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-------RKFNQYEGFCS 538 (781)
T ss_dssp EEC----------------TT--TSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-------EEECTTTTCSC
T ss_pred ccc----------------Cc--ccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-------EEccCCCCCCC
Confidence 000 00 000113567788776 34455556544577788765531 0111 111234
Q ss_pred CCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec--cCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 315 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS--HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
..|.++...+++ .+..|+.+|-|..||..+++. ..+. ..-....|.++...++|.+.+++ .+| |..++..
T Consensus 539 ~~i~~i~~d~~g---~lWi~T~~Glv~~~d~~~~~~---~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~ 610 (781)
T 3v9f_A 539 NTINQIYRSSKG---QMWLATGEGLVCFPSARNFDY---QVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-ISCYITS 610 (781)
T ss_dssp SCEEEEEECTTS---CEEEEETTEEEEESCTTTCCC---EEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEEETT
T ss_pred CeeEEEEECCCC---CEEEEECCCceEEECCCCCcE---EEccccCCCCCceEEEEEECCCCCEEEEc-CCc-eEEEECC
Confidence 568888887777 355566666558888876642 2222 11123468889999888877765 444 5555543
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.87 E-value=5.5e-07 Score=80.73 Aligned_cols=280 Identities=11% Similarity=0.037 Sum_probs=159.7
Q ss_pred cceEEEEecCCc--EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee------------------cC
Q 016185 48 YFNVFATVGGNR--VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG------------------IN 107 (394)
Q Consensus 48 ~~~~las~~~d~--i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~------------------~d 107 (394)
||+++..+..+. |.+.|+.+.+..+.+... .......+++.--|+++ ++++++ .+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip----~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP----NAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECS----SCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC----CCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccC
Confidence 577777766544 999999999987755421 22334555553227888 666663 45
Q ss_pred CeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEcee-----------------eeEEeeccceeeeeeecccee
Q 016185 108 GIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASK-----------------VIIISSLSLICLLLFIRSNCL 170 (394)
Q Consensus 108 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----------------~i~~~~~~~~~~~~~~~~~~~ 170 (394)
+.+.+.|.++.+...++.-.. ....++++| ++.++++.+. .+.+-+........ +.+...
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v-~~Gk~~ 251 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAI-AAGDYQ 251 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHH-HHTCSE
T ss_pred ceEEEEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEec-cCCCee
Confidence 689999999999998888533 457788999 5566665553 11222211111111 111111
Q ss_pred eeccCCcEEEEEecC--CcE-EEEeeccCCCcccEEEEEecCCCCeeEE-eeccCCcEEEEEccccceeeccccccCCCC
Q 016185 171 RVGQDESVRLWNVQT--GIC-ILIFAGAGGHRNEVLSVDFHPSDIYRIA-SCGMDNTVKIWSMKEFWTYVEKSFTWTDLP 246 (394)
Q Consensus 171 ~~~~d~~i~vwd~~~--~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 246 (394)
-. +.|.|.|.++ ++. +..+. -.....++.++| |+++++ ++..+.+|.++|+.+.+.......
T Consensus 252 ~i---~~V~VID~~~~~~~~~~~~Ip----vg~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l------ 317 (595)
T 1fwx_A 252 EL---NGVKVVDGRKEASSLFTRYIP----IANNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENA------ 317 (595)
T ss_dssp EE---TTEEEEECSGGGCCSSEEEEE----EESSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCC------
T ss_pred EE---CcEEEEeCcccCCceeEEEEe----cCCCceEEEEcC-CCCEEEEeCCCCCeEEEEECccccccccccc------
Confidence 11 4599999988 555 55565 334567899999 776554 555789999999997431110000
Q ss_pred CCCCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCC-CCCCCcceecccccCCCCCe-----E
Q 016185 247 SKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQ-SPGEGTADILQKYPVPECDI-----W 318 (394)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~i-----~ 318 (394)
.......... .-......++|+ |...++.-.|+.|.+||+..... .......+.+.++..+..+- .
T Consensus 318 -----~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~ 391 (595)
T 1fwx_A 318 -----DPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVM 391 (595)
T ss_dssp -----CGGGGEEECC-BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETT
T ss_pred -----CcccceEEEc-CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceecc
Confidence 0001111122 123346677787 64445666799999999886210 00000112444544443321 1
Q ss_pred EEEEeecCCcceEEEEeC---CCc----------EEEEEecCCCceeeEEec
Q 016185 319 FIKFSCDFHYNAAAIGNR---EGK----------IFVWELQSSPPVLIARLS 357 (394)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~---dg~----------i~iwd~~~~~~~~~~~~~ 357 (394)
.+.++||+ ++|++... |+. -.++|+..++.+++....
T Consensus 392 g~t~~~DG--k~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p 441 (595)
T 1fwx_A 392 GETLDATN--DWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGP 441 (595)
T ss_dssp TTSTTCCS--SEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEE
T ss_pred ceEeCCCC--CEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEc
Confidence 22457888 46666543 432 188999776655555444
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.86 E-value=1.2e-06 Score=70.29 Aligned_cols=185 Identities=10% Similarity=0.029 Sum_probs=115.3
Q ss_pred EEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCce--eEEEEcCCCCcEEEEceeeeEEeeccceeeeee
Q 016185 87 YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSI--NEIRTQPLKPSLVVSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 87 ~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~ 164 (394)
..+.+. ++. +..+.+.+|.|+++|+++++.++++ -. ... ..+++. +..+.+..-.
T Consensus 58 qGL~~~---~~~-Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~--------------- 114 (268)
T 3nok_A 58 QGLVFH---QGH-FFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWT--------------- 114 (268)
T ss_dssp EEEEEE---TTE-EEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESS---------------
T ss_pred ceEEEE---CCE-EEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEcc---------------
Confidence 345544 344 7778888899999999999988887 33 233 335554 3455555555
Q ss_pred eccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCC
Q 016185 165 IRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 165 ~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
++.+.+||..+.+.+.++.. ...-..+++ ++..|+.+..++.|.++|..+.+.
T Consensus 115 ----------~~~v~V~D~~Tl~~~~ti~~----~~eGwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v---------- 167 (268)
T 3nok_A 115 ----------EGLLFTWSGMPPQRERTTRY----SGEGWGLCY---WNGKLVRSDGGTMLTFHEPDGFAL---------- 167 (268)
T ss_dssp ----------SCEEEEEETTTTEEEEEEEC----SSCCCCEEE---ETTEEEEECSSSEEEEECTTTCCE----------
T ss_pred ----------CCEEEEEECCcCcEEEEEeC----CCceeEEec---CCCEEEEECCCCEEEEEcCCCCeE----------
Confidence 89999999999999999983 222244553 445565556689999999998543
Q ss_pred CCCCCCccccccceeeeec--CCC---ceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccc----ccCCC
Q 016185 245 LPSKFPTKYVQFPVFIASV--HSN---YVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQK----YPVPE 314 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~--~~~---~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~----~~~~~ 314 (394)
+..+.. +.. .+..+.|. |...+..-.+..|.+.|.++++.........+... .....
T Consensus 168 -------------~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~ 234 (268)
T 3nok_A 168 -------------VGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPE 234 (268)
T ss_dssp -------------EEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTT
T ss_pred -------------EEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcC
Confidence 222221 222 34556666 55444444688999999998863111100000000 11123
Q ss_pred CCeEEEEEeecCCcceEEEEe
Q 016185 315 CDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~ 335 (394)
.-.+.|++.|+.+ +++++|-
T Consensus 235 ~vlNGIA~dp~~~-rlfVTGK 254 (268)
T 3nok_A 235 AVLNGIAVEPGSG-RIFMTGK 254 (268)
T ss_dssp CCEEEEEECTTTC-CEEEEET
T ss_pred CceEEEEEcCCCC-EEEEeCC
Confidence 4578999999886 5666664
No 255
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.85 E-value=2.5e-06 Score=67.77 Aligned_cols=189 Identities=11% Similarity=0.067 Sum_probs=114.4
Q ss_pred eEEEEEEEcCCCCcEEEEeecC--CeEEEEECCCCeeEEEEEecCCc-eeEEEEcCCCCcEEEEceeeeEEeeccceeee
Q 016185 86 FYTVSWACNVDGIPFLVAGGIN--GIIRVIDVSNEKLHKSFVGHGDS-INEIRTQPLKPSLVVSASKVIIISSLSLICLL 162 (394)
Q Consensus 86 v~~~~~~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~ 162 (394)
...+.|. . +. +..+.+.+ ..|+++|+++++.++++.-.... -..++.. ++.+....-.
T Consensus 23 tqGL~~~--~-~~-LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~------------- 83 (243)
T 3mbr_X 23 TEGLFYL--R-GH-LYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWR------------- 83 (243)
T ss_dssp EEEEEEE--T-TE-EEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESS-------------
T ss_pred cccEEEE--C-CE-EEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEee-------------
Confidence 3456654 4 44 66666665 48999999999999888743322 1234443 3455555555
Q ss_pred eeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecccccc
Q 016185 163 LFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 163 ~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
++.+.+||..+.+.+.++.. ...-..++. ++..|+.+..++.|.++|..+.+.
T Consensus 84 ------------~~~v~v~D~~tl~~~~ti~~----~~~Gwglt~---dg~~L~vSdgs~~l~~iDp~t~~~-------- 136 (243)
T 3mbr_X 84 ------------NHEGFVYDLATLTPRARFRY----PGEGWALTS---DDSHLYMSDGTAVIRKLDPDTLQQ-------- 136 (243)
T ss_dssp ------------SSEEEEEETTTTEEEEEEEC----SSCCCEEEE---CSSCEEEECSSSEEEEECTTTCCE--------
T ss_pred ------------CCEEEEEECCcCcEEEEEeC----CCCceEEee---CCCEEEEECCCCeEEEEeCCCCeE--------
Confidence 89999999999999999983 222245553 445555555688999999998542
Q ss_pred CCCCCCCCccccccceeeeec--CC---CceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc----cC
Q 016185 243 TDLPSKFPTKYVQFPVFIASV--HS---NYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY----PV 312 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~--~~---~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~----~~ 312 (394)
+..+.. +. ..+..+.+. |...+..-.+..|.+.|.++++.........+.... ..
T Consensus 137 ---------------~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~ 201 (243)
T 3mbr_X 137 ---------------VGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDS 201 (243)
T ss_dssp ---------------EEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCT
T ss_pred ---------------EEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCC
Confidence 222221 21 234556665 554444446789999999988631111000011000 11
Q ss_pred CCCCeEEEEEeecCCcceEEEEeC
Q 016185 313 PECDIWFIKFSCDFHYNAAAIGNR 336 (394)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~l~~~~~ 336 (394)
...-.+.|+++|+.+ +++++|-.
T Consensus 202 ~~~vlNGIA~d~~~~-~lfVTGK~ 224 (243)
T 3mbr_X 202 TNDVLNGIAFDAEHD-RLFVTGKR 224 (243)
T ss_dssp TSSCEEEEEEETTTT-EEEEEETT
T ss_pred cCCceEEEEEcCCCC-EEEEECCC
Confidence 224578999999885 56666643
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.85 E-value=4e-06 Score=76.92 Aligned_cols=118 Identities=12% Similarity=0.131 Sum_probs=66.0
Q ss_pred ceEEEEec-CCcEEEEEc-CCCceeEEeeecccCCccc-----ce-EEEEEEEcCCCCcEEEEeecCCeEEEEECCCCee
Q 016185 49 FNVFATVG-GNRVTVYQC-LEGGVIAALQSYVDEDKEE-----SF-YTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL 120 (394)
Q Consensus 49 ~~~las~~-~d~i~vw~~-~~~~~~~~~~~~~~~~~~~-----~v-~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 120 (394)
+.+++... .+.|.-+|. .+|+.+-............ .+ ..++. .+. .++.++.|+.|..+|..+++.
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~v~v~~~dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY----GAG-QIVKKQANGHLLALDAKTGKI 137 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE----ETT-EEEEECTTSEEEEEETTTCCE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE----ECC-EEEEEeCCCEEEEEECCCCCE
Confidence 45555544 344999999 8998765554211100000 00 01122 244 688888899999999999999
Q ss_pred EEEEEecCC----ceeE-EEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEee
Q 016185 121 HKSFVGHGD----SINE-IRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFA 193 (394)
Q Consensus 121 ~~~~~~~~~----~v~~-~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~ 193 (394)
+.+...... .+.+ .... ++.+++.... .. -+.++.|..+|.++|+.+..+.
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v~--~g~v~vg~~~-----------------~~---~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFVA--KDTVLMGCSG-----------------AE---LGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEEE--TTEEEEECBC-----------------GG---GTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCCCccceeccCCEEE--CCEEEEEecC-----------------Cc---cCCCCEEEEEECCCCcEEEEEc
Confidence 887763221 1110 0011 2222222210 00 0016899999999999988776
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=8.3e-06 Score=76.37 Aligned_cols=171 Identities=12% Similarity=0.010 Sum_probs=92.2
Q ss_pred EEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec------CCeEEEEECCCCeeEEE
Q 016185 51 VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI------NGIIRVIDVSNEKLHKS 123 (394)
Q Consensus 51 ~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~ 123 (394)
.++.++.++ |..+|..+|+.+-..+..... ....+...-.. .++ .++.+.. +|.|..+|..+++.+.+
T Consensus 119 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~P~v--~~~--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKTGKAIWSQQTTDPA-KPYSITGAPRV--VKG--KVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSCTT-SSCBCCSCCEE--ETT--EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCEeeeeccCCCC-CcceecCCCEE--ECC--EEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 455555555 999999999987666532110 01111110001 134 4555543 58999999999999988
Q ss_pred EEecC-C------------------------------ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeee
Q 016185 124 FVGHG-D------------------------------SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRV 172 (394)
Q Consensus 124 ~~~~~-~------------------------------~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~ 172 (394)
+.... . ....+++.| ...+++.+...-..|....... ...++++
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~--~~gd~l~-- 268 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSP--GGGDNLY-- 268 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHST--TCCCCTT--
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCC--CCCCcee--
Confidence 86311 0 011355666 3344444443000111000000 0000111
Q ss_pred ccCCcEEEEEecCCcEEEEeeccCCCc-------ccEEEEEecCCCCe---eEEeeccCCcEEEEEcccccee
Q 016185 173 GQDESVRLWNVQTGICILIFAGAGGHR-------NEVLSVDFHPSDIY---RIASCGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 173 ~~d~~i~vwd~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~---~l~s~~~dg~v~iwd~~~~~~~ 235 (394)
.+.|..+|.++|+.+..+... .|. .+.....+.. +++ .++.++.+|.++++|..+++..
T Consensus 269 --~~~v~AlD~~tG~~~W~~~~~-~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 269 --LSSILAIRPDTGKLAWHYQVT-PGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp --TTEEEEECTTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred --eeeEEEEcCCCCceeeEeecC-CCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 025999999999998887731 121 2222222222 443 6899999999999999997754
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.79 E-value=4.9e-06 Score=76.32 Aligned_cols=122 Identities=7% Similarity=0.064 Sum_probs=67.5
Q ss_pred ceEEEEec-CCcEEEEEc-CCCceeEEeeecccCCcc------cceEEEEEEEcCCCC---cEEEEeecCCeEEEEECCC
Q 016185 49 FNVFATVG-GNRVTVYQC-LEGGVIAALQSYVDEDKE------ESFYTVSWACNVDGI---PFLVAGGINGIIRVIDVSN 117 (394)
Q Consensus 49 ~~~las~~-~d~i~vw~~-~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~---~~l~s~~~dg~i~vwd~~~ 117 (394)
+.+++... .+.|.-+|. .+|+.+-........... .....+++. |.+. .+|+.++.|+.|.-+|..+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~--p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYW--PGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEE--CCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEE--ecCCcceeEEEEEcCCCEEEEEECCC
Confidence 44444444 344999999 899876555422110000 000112332 3333 1388888999999999999
Q ss_pred CeeEEEEEecCC----ceeE-EEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEe
Q 016185 118 EKLHKSFVGHGD----SINE-IRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIF 192 (394)
Q Consensus 118 ~~~~~~~~~~~~----~v~~-~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 192 (394)
++.+.+...... .+.+ -... ++.+++..+. .. -+.++.|+.+|.++|+.+..+
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g-----------------~e---~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSG-----------------AE---LGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBC-----------------GG---GTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEeecCCCCCccceeecCCEEE--CCEEEEEecc-----------------cc---cCCCCeEEEEECCCCcEEEEE
Confidence 999887763221 1111 0111 2222222210 00 002789999999999998887
Q ss_pred ec
Q 016185 193 AG 194 (394)
Q Consensus 193 ~~ 194 (394)
..
T Consensus 199 ~~ 200 (599)
T 1w6s_A 199 YA 200 (599)
T ss_dssp ES
T ss_pred cC
Confidence 63
No 259
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.78 E-value=1.5e-06 Score=81.56 Aligned_cols=281 Identities=9% Similarity=-0.080 Sum_probs=143.2
Q ss_pred EEEEEeeCCCcceEEEEecCC------------cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee
Q 016185 38 AVVFNFIDSRYFNVFATVGGN------------RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG 105 (394)
Q Consensus 38 ~i~~sp~~~~~~~~las~~~d------------~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~ 105 (394)
++++.| .++++++.|+.+ .+.+||+.+++.... ..... .+..-...+++. .+|+ +++.|+
T Consensus 190 ~~av~~---~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~-~~~~~-~~~~~~~~~~~~--~~g~-lyv~GG 261 (656)
T 1k3i_A 190 AAAIEP---TSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDR-TVTVT-KHDMFCPGISMD--GNGQ-IVVTGG 261 (656)
T ss_dssp EEEEET---TTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCC-EEEEC-SCCCSSCEEEEC--TTSC-EEEECS
T ss_pred eEEEEe---cCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeC-cccCC-CCCCccccccCC--CCCC-EEEeCC
Confidence 456665 257888887531 278899887763221 11100 111112234444 7888 788887
Q ss_pred -cCCeEEEEECCCCeeEEEEEecCC-ceeEEEEcCCCCcEEEEce-eeeEEeeccceeeeeeeccceeeeccCCcEEEEE
Q 016185 106 -INGIIRVIDVSNEKLHKSFVGHGD-SINEIRTQPLKPSLVVSAS-KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWN 182 (394)
Q Consensus 106 -~dg~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~-~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd 182 (394)
.+..+.+||..+.+-...-..+.. .-.++...+ ++.+++.|+ . .. +..-..+.+||
T Consensus 262 ~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~---------------~~-----~~~~~~~e~yd 320 (656)
T 1k3i_A 262 NDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSW---------------SG-----GVFEKNGEVYS 320 (656)
T ss_dssp SSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCC---------------CS-----SSCCCCEEEEE
T ss_pred CCCCceEEecCcCCceeECCCCCccccccceEEec-CCeEEEEeCcc---------------cC-----CcccccceEeC
Confidence 456899999887653322111111 113445555 567777777 3 00 00025689999
Q ss_pred ecCCcEEEEe----eccCCCcccEEEEEecCCCCeeEEeeccCCc---------EEEEEccccceeeccccccCCCCCCC
Q 016185 183 VQTGICILIF----AGAGGHRNEVLSVDFHPSDIYRIASCGMDNT---------VKIWSMKEFWTYVEKSFTWTDLPSKF 249 (394)
Q Consensus 183 ~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~---------v~iwd~~~~~~~~~~~~~~~~~~~~~ 249 (394)
..+++....- ........ ...+.. ++..++.|+.+|. +..||..+....
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~---~~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~-------------- 382 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADK---QGLYRS-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV-------------- 382 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCT---TGGGTT-TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE--------------
T ss_pred CCCCcceeCCCccccccccccc---cceeec-CCceEEEECCCCcEEEecCccceeeeecCCccee--------------
Confidence 9877644320 00000000 012223 4555566655544 566776652210
Q ss_pred Cccccccceeeeec------CCCceEEEEE---eCcEEEEeecCC-----------eEEEecCCCCCCCCCCCcceec-c
Q 016185 250 PTKYVQFPVFIASV------HSNYVDCNRW---LGDFILSKSVDN-----------EIVLWEPKMKEQSPGEGTADIL-Q 308 (394)
Q Consensus 250 ~~~~~~~~~~~~~~------~~~~i~~~~~---~~~~l~~~~~dg-----------~i~~~d~~~~~~~~~~~~~~~~-~ 308 (394)
.+...... ....-.++.+ .+++++.|+.++ .+.+||..+..-. ... .
T Consensus 383 ------~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~------~~~~~ 450 (656)
T 1k3i_A 383 ------KSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNT------VFASN 450 (656)
T ss_dssp ------EEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEE------EECTT
T ss_pred ------ecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCee------EEccC
Confidence 00111100 1112233433 377788877543 6888888765411 010 0
Q ss_pred cccCCCCCeEEEEEeecCCcceEEEEeCC-----------CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEE
Q 016185 309 KYPVPECDIWFIKFSCDFHYNAAAIGNRE-----------GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTI 377 (394)
Q Consensus 309 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 377 (394)
.++... .-.++...|++ .+++.|+.+ ..+.+||..+.+...+..+. ..........+.|+++.+
T Consensus 451 ~mp~~R-~~~~~~~l~~g--~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~--~~R~~hs~a~ll~dg~v~ 525 (656)
T 1k3i_A 451 GLYFAR-TFHTSVVLPDG--STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS--IVRVYHSISLLLPDGRVF 525 (656)
T ss_dssp CCSSCC-BSCEEEECTTS--CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS--SCCCTTEEEEECTTSCEE
T ss_pred CCCCCc-ccCCeEECCCC--CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC--CccccccHhhcCCCcEEE
Confidence 111111 11244556787 588888754 56899999887433333222 222223345567899999
Q ss_pred EEecc
Q 016185 378 LSCCE 382 (394)
Q Consensus 378 ~s~~~ 382 (394)
+.|+.
T Consensus 526 v~GG~ 530 (656)
T 1k3i_A 526 NGGGG 530 (656)
T ss_dssp EEECC
T ss_pred ecCCC
Confidence 99985
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.78 E-value=3.5e-05 Score=64.79 Aligned_cols=238 Identities=11% Similarity=0.044 Sum_probs=132.5
Q ss_pred eEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeee
Q 016185 86 FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFI 165 (394)
Q Consensus 86 v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~ 165 (394)
...++|. ++|+ ++++-..++.|..||... +....+. .......+++.+ +++++++...
T Consensus 34 pegia~~--~~g~-lyv~d~~~~~I~~~d~~g-~~~~~~~-~~~~p~gia~~~-dG~l~vad~~---------------- 91 (306)
T 2p4o_A 34 LENLASA--PDGT-IFVTNHEVGEIVSITPDG-NQQIHAT-VEGKVSGLAFTS-NGDLVATGWN---------------- 91 (306)
T ss_dssp EEEEEEC--TTSC-EEEEETTTTEEEEECTTC-CEEEEEE-CSSEEEEEEECT-TSCEEEEEEC----------------
T ss_pred cceEEEC--CCCC-EEEEeCCCCeEEEECCCC-ceEEEEe-CCCCceeEEEcC-CCcEEEEecc----------------
Confidence 4457776 8888 777777889999999764 3333333 345688999999 5666555432
Q ss_pred ccceeeeccCC-cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCC
Q 016185 166 RSNCLRVGQDE-SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 166 ~~~~~~~~~d~-~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
.++ .|..+|..+++....... ........++..+ ++..+++-..++.|..+|................
T Consensus 92 --------~~~~~v~~~d~~~g~~~~~~~~--~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~ 160 (306)
T 2p4o_A 92 --------ADSIPVVSLVKSDGTVETLLTL--PDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA 160 (306)
T ss_dssp --------TTSCEEEEEECTTSCEEEEEEC--TTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS
T ss_pred --------CCcceEEEEcCCCCeEEEEEeC--CCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc
Confidence 022 466677777765443321 1222334555555 6666666556888999987653111000000000
Q ss_pred CCCCCCccccccceeeeecCCCceEEEEEeCcE-EEEeecCCeEEEecCCC-CCCCCCCCcceecccccCCCCCeEEEEE
Q 016185 245 LPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDF-ILSKSVDNEIVLWEPKM-KEQSPGEGTADILQKYPVPECDIWFIKF 322 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 322 (394)
. ..+ ...-.....+..+++. +++-...+.|..|++.. ++. ...+....+ .....+++
T Consensus 161 -~--------~~~----~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~----~~~~~~~~~----~~P~gi~v 219 (306)
T 2p4o_A 161 -R--------SNS----ESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKP----GEPEIFVEQ----TNIDDFAF 219 (306)
T ss_dssp -C--------SST----TCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCB----CCCEEEEES----CCCSSEEE
T ss_pred -c--------ccc----cCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCC----CccEEEecc----CCCCCeEE
Confidence 0 000 0001122334455654 45555678999999875 221 011111111 12346788
Q ss_pred eecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEec---cCCCEEEEecc
Q 016185 323 SCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS---YDGSTILSCCE 382 (394)
Q Consensus 323 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~~ 382 (394)
.+++ +++++....+.|.++|.. ++...+..+. .....+++++|. |+++.|+.++.
T Consensus 220 d~dG--~l~va~~~~~~V~~~~~~-G~~~~~~~~~--~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 220 DVEG--NLYGATHIYNSVVRIAPD-RSTTIIAQAE--QGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp BTTC--CEEEECBTTCCEEEECTT-CCEEEEECGG--GTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCCC--CEEEEeCCCCeEEEECCC-CCEEEEeecc--cccCCceEEEEecccCCCCEEEEECC
Confidence 9988 566666667889999865 4322222333 223568999998 88877766543
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.77 E-value=5.5e-05 Score=63.85 Aligned_cols=225 Identities=7% Similarity=-0.116 Sum_probs=133.6
Q ss_pred EEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEE
Q 016185 101 LVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRL 180 (394)
Q Consensus 101 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~v 180 (394)
|+.+.. ..|+..|+...+....+. .......++|++.++.++++-.. .+.|..
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~-------------------------~~~I~~ 56 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS-------------------------QRMICS 56 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETT-------------------------TTEEEE
T ss_pred EEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECC-------------------------CCcEEE
Confidence 343333 468889988776555444 34567899999856667777666 789999
Q ss_pred EEecC----CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccccc
Q 016185 181 WNVQT----GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 256 (394)
Q Consensus 181 wd~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (394)
+++.. ......+. ........+++++.+++++++-...+.|.++++....
T Consensus 57 ~~~~g~~~~~~~~~~~~---~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~----------------------- 110 (316)
T 1ijq_A 57 TQLDRAHGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----------------------- 110 (316)
T ss_dssp EEC--------CEEEEC---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-----------------------
T ss_pred EECCCCCCCcccEEEEe---CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-----------------------
Confidence 99875 22222222 1223457888886356666776778899999987521
Q ss_pred ceeeeecCCCceEEEEEe--CcEEEEeec-C-CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEE
Q 016185 257 PVFIASVHSNYVDCNRWL--GDFILSKSV-D-NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 332 (394)
Q Consensus 257 ~~~~~~~~~~~i~~~~~~--~~~l~~~~~-d-g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 332 (394)
..............++++ +..++.+.. . +.|..+++..... ..+. ...-.....+++++++. .+++
T Consensus 111 ~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-------~~~~--~~~~~~P~gla~d~~~~-~lY~ 180 (316)
T 1ijq_A 111 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-------YSLV--TENIQWPNGITLDLLSG-RLYW 180 (316)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-------EEEE--CSSCSCEEEEEEETTTT-EEEE
T ss_pred eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-------EEEE--ECCCCCceEEEEeccCC-EEEE
Confidence 111112223345677776 444443333 3 6888888764321 0111 11223567899998764 4555
Q ss_pred EEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 333 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
+-+..+.|..+|+.......+.... ........+++. .+.++++-...+.|..++.
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~~~~~--~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTILEDE--KRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECT--TTTSSEEEEEEE-TTEEEEEETTTTEEEEEET
T ss_pred EECCCCeEEEEecCCCceEEEeecC--CccCCcEEEEEE-CCEEEEEECCCCeEEEEeC
Confidence 5566789999999765433332221 222456778885 3555556666778888875
No 262
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.76 E-value=5.7e-05 Score=63.77 Aligned_cols=230 Identities=5% Similarity=-0.072 Sum_probs=135.2
Q ss_pred EEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC---CeeEEE-EEe
Q 016185 51 VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN---EKLHKS-FVG 126 (394)
Q Consensus 51 ~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~---~~~~~~-~~~ 126 (394)
+|+.+..+.|+..|+.+.+....+.. ......++|. +.+..+.++-..++.|..+++.. +..... +..
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~------~~~p~g~~~d--~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~ 74 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPN------LRNVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 74 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECS------CSSEEEEEEE--TTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred EEEEECCCeEEEEECCCcceEehhcC------CCceEEEEEE--eCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC
Confidence 45555566699999887765554432 2344567776 76653566666778999999875 122222 222
Q ss_pred cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEE
Q 016185 127 HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 206 (394)
Q Consensus 127 ~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~ 206 (394)
.......+++.+.+++++++-.. .+.|.+.++........+. ........++
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~-------------------------~~~I~~~~~~g~~~~~~~~---~~~~~P~~ia 126 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSV-------------------------LGTVSVADTKGVKRKTLFR---ENGSKPRAIV 126 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETT-------------------------TTEEEEEETTSSSEEEEEE---CTTCCEEEEE
T ss_pred CCCCcCEEEEeecCCeEEEEECC-------------------------CCEEEEEeCCCCceEEEEE---CCCCCcceEE
Confidence 22456788888756666666666 7899999986544333333 2345678999
Q ss_pred ecCCCCeeEEeeccC-CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEee
Q 016185 207 FHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKS 282 (394)
Q Consensus 207 ~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~ 282 (394)
++|.++.++++.... +.|...++.... ........-.....++++ ++ +.++-.
T Consensus 127 vdp~~g~ly~~d~~~~~~I~~~~~dG~~-----------------------~~~~~~~~~~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 127 VDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------IYSLVTENIQWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCC-----------------------EEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred eCCCCCEEEEEccCCCCeEEEEcCCCCC-----------------------eEEEEECCCCCceEEEEeccCCEEEEEEC
Confidence 998455555554433 678888775411 011111123456678887 44 445555
Q ss_pred cCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 283 VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 283 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
..+.|..+|+..... +.+............+++. .+ .++++-...+.|..++..+++
T Consensus 184 ~~~~I~~~d~dg~~~-------~~~~~~~~~~~~P~giav~-~~--~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 184 KLHSISSIDVNGGNR-------KTILEDEKRLAHPFSLAVF-ED--KVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp TTTEEEEEETTSCSC-------EEEEECTTTTSSEEEEEEE-TT--EEEEEETTTTEEEEEETTTCC
T ss_pred CCCeEEEEecCCCce-------EEEeecCCccCCcEEEEEE-CC--EEEEEECCCCeEEEEeCCCCc
Confidence 678999999875321 1111111112234567774 33 466666777889999876553
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.69 E-value=0.00011 Score=63.01 Aligned_cols=223 Identities=6% Similarity=-0.129 Sum_probs=134.2
Q ss_pred EEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEE
Q 016185 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVR 179 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 179 (394)
+|+.+. ...|+..++........+. ....+..++|++.++.++++-.. .+.|.
T Consensus 46 ~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~-------------------------~~~I~ 98 (349)
T 3v64_C 46 VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVT-------------------------LDRIL 98 (349)
T ss_dssp EEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETT-------------------------TTEEE
T ss_pred eeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEecc-------------------------CCceE
Confidence 444433 3457777876554433333 34457899999856667767666 78899
Q ss_pred EEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccccccee
Q 016185 180 LWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVF 259 (394)
Q Consensus 180 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (394)
.+++..+.....+. ........+++++.+++++++-...+.|.+.++.... ...
T Consensus 99 r~~~~g~~~~~~~~---~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-----------------------~~~ 152 (349)
T 3v64_C 99 RANLNGSNVEEVVS---TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-----------------------RKV 152 (349)
T ss_dssp EEETTSCSCEEEEC---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-----------------------CEE
T ss_pred EEecCCCCceEEEe---CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-----------------------eEE
Confidence 99987665444333 2234457888887466777777778889999987621 111
Q ss_pred eeecCCCceEEEEEe--Cc-EEEEeecC-CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEe
Q 016185 260 IASVHSNYVDCNRWL--GD-FILSKSVD-NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGN 335 (394)
Q Consensus 260 ~~~~~~~~i~~~~~~--~~-~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~ 335 (394)
...........++++ +. ++++-... +.|..+++...... .+ ....-.....++++|++. .+.++-.
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-------~~--~~~~~~~PnGla~d~~~~-~lY~aD~ 222 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-------II--ADTHLFWPNGLTIDYAGR-RMYWVDA 222 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-------ES--CCSSCSCEEEEEEETTTT-EEEEEET
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-------EE--EECCCCCcceEEEeCCCC-EEEEEEC
Confidence 122223445677776 33 44444444 78888887754310 11 111223467899998764 4555556
Q ss_pred CCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 336 REGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 336 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
..+.|..+|+.......+ +. .......++++. ++.+.++-...+.|...+
T Consensus 223 ~~~~I~~~~~dG~~~~~~--~~--~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAV--IS--QGLPHPFAITVF-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp TTTEEEEEETTSCSCEEE--EC--SSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEeCCCCceEEE--Ee--CCCCCceEEEEE-CCEEEEecCCCCeEEEEE
Confidence 678899999876432222 22 223456778883 445555555667777776
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.68 E-value=3.9e-05 Score=66.78 Aligned_cols=202 Identities=8% Similarity=-0.103 Sum_probs=120.8
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
..+..++|++ ..+.++.+-..++ |..+++..+.....+.. .......+++. +.+..+.++-...+.|.+
T Consensus 116 ~~~~gl~~d~---~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-----~~~~p~glavd--~~~g~lY~~d~~~~~I~~ 185 (386)
T 3v65_B 116 ENAIALDFHH---RRELVFWSDVTLDRILRANLNGSNVEEVVST-----GLESPGGLAVD--WVHDKLYWTDSGTSRIEV 185 (386)
T ss_dssp SCEEEEEEET---TTTEEEEEETTTTEEEEEETTSCCEEEEECS-----SCSCCCCEEEE--TTTTEEEEEETTTTEEEE
T ss_pred CccEEEEEec---CCCeEEEEeCCCCcEEEEecCCCCcEEEEeC-----CCCCccEEEEE--eCCCeEEEEcCCCCeEEE
Confidence 3577899997 2456666655555 99999776543332221 11122346655 655535666667788999
Q ss_pred EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC-CcEEEEEecCCcEEEE
Q 016185 113 IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD-ESVRLWNVQTGICILI 191 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d-~~i~vwd~~~~~~~~~ 191 (394)
.++........+.........+++.|.++.++++-.. . +.|...++........
T Consensus 186 ~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~-------------------------~~~~I~r~~~dG~~~~~~ 240 (386)
T 3v65_B 186 ANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-------------------------NTPRIEASSMDGSGRRII 240 (386)
T ss_dssp CBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS-------------------------SSCEEEEEETTSCSCEEE
T ss_pred EeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC-------------------------CCCEEEEEeCCCCCcEEE
Confidence 8876443333333333567899999866666666544 4 7788888764433333
Q ss_pred eeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEE
Q 016185 192 FAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCN 271 (394)
Q Consensus 192 ~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 271 (394)
.. ..-.....|+++|.++.++++-+..+.|..+|+.... ....+.........+
T Consensus 241 ~~---~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~-----------------------~~~~~~~~~~~P~gi 294 (386)
T 3v65_B 241 AD---THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-----------------------RKAVISQGLPHPFAI 294 (386)
T ss_dssp EC---SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS-----------------------CEEEECSSCSSEEEE
T ss_pred EE---CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe-----------------------eEEEEECCCCCceEE
Confidence 32 2344578999997456666666677889999886521 111122222344566
Q ss_pred EEe-CcEEEEeecCCeEEEecCCCCC
Q 016185 272 RWL-GDFILSKSVDNEIVLWEPKMKE 296 (394)
Q Consensus 272 ~~~-~~~l~~~~~dg~i~~~d~~~~~ 296 (394)
++. +.++++-...+.|..+|..+++
T Consensus 295 av~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 295 TVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEECCEEEEeeCCCCeEEEEECCCCc
Confidence 666 5555666667888888865554
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.67 E-value=3.5e-05 Score=70.64 Aligned_cols=169 Identities=11% Similarity=0.044 Sum_probs=88.6
Q ss_pred EEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec------CCeEEEEECCCCeeEEE
Q 016185 51 VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI------NGIIRVIDVSNEKLHKS 123 (394)
Q Consensus 51 ~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~ 123 (394)
.++.++.++ +..+|..+|+.+-....... .....+.+.-.. .++ .++.++. +|.|..+|..+++.+.+
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~-~~~~~~~~~P~v--~~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDP-KVGSTLTQAPFV--AKD--TVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCG-GGTCBCCSCCEE--ETT--EEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCC-CccceeccCCEE--ECC--EEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 444555555 99999999988765542110 000011110001 134 4555544 79999999999999988
Q ss_pred EEecCCce--------------------------------------eEEEEcCCCCcEEEEceeeeEEeeccceeeeeee
Q 016185 124 FVGHGDSI--------------------------------------NEIRTQPLKPSLVVSASKVIIISSLSLICLLLFI 165 (394)
Q Consensus 124 ~~~~~~~v--------------------------------------~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~ 165 (394)
+....... ..+++.+.. ..++.+......|.... .+
T Consensus 192 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g~vy~~~g~~~~~~~~~-----~~ 265 (571)
T 2ad6_A 192 AFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-NLFYYGSGNPAPWNETM-----RP 265 (571)
T ss_dssp EESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGG-----SC
T ss_pred EccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-CeEEEECCCCccccCCc-----cC
Confidence 77432110 123444422 23322221000000000 00
Q ss_pred ccceeeeccCCcEEEEEecCCcEEEEeeccC-------CCcccEEEEEecCCCC---eeEEeeccCCcEEEEEcccccee
Q 016185 166 RSNCLRVGQDESVRLWNVQTGICILIFAGAG-------GHRNEVLSVDFHPSDI---YRIASCGMDNTVKIWSMKEFWTY 235 (394)
Q Consensus 166 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~ 235 (394)
.++++ .+.|..+|.++|+.+..++... ....++. +...+ ++ ..++.++.+|.+.++|..+++..
T Consensus 266 gd~~y----~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 266 GDNKW----TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp SCCTT----TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred CCcee----EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-Eeccc-CCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 00100 1369999999999988876321 0112222 22223 55 46778899999999999987654
Q ss_pred e
Q 016185 236 V 236 (394)
Q Consensus 236 ~ 236 (394)
-
T Consensus 340 w 340 (571)
T 2ad6_A 340 V 340 (571)
T ss_dssp E
T ss_pred e
Confidence 3
No 266
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.66 E-value=5e-05 Score=64.35 Aligned_cols=257 Identities=10% Similarity=0.002 Sum_probs=132.9
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeeccc---------------CCcccceEEEEEEEcC-C
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVD---------------EDKEESFYTVSWACNV-D 96 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~-~ 96 (394)
....+++|.+ +++++.++..++ |..|+..++.. ..+..... .........+++. + +
T Consensus 19 ~~p~~i~~d~----~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~--~~~ 91 (322)
T 2fp8_A 19 YAPNSFTFDS----TNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYN--LQN 91 (322)
T ss_dssp SCCCCEECCT----TCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEE--TTT
T ss_pred CCceEEEEcC----CCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEc--CCC
Confidence 3467788887 677555665555 99998765543 23221000 0011235666665 7 5
Q ss_pred CCcEEEEeecCCeEEEEECCCCeeEEEEEe-----cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceee
Q 016185 97 GIPFLVAGGINGIIRVIDVSNEKLHKSFVG-----HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLR 171 (394)
Q Consensus 97 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~ 171 (394)
|. |+.+...+.|..+|..+++. ..+.. .......+++.+.++++.++-...- +.. ......++.
T Consensus 92 g~--l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~--~~~------~~~~~~~~~ 160 (322)
T 2fp8_A 92 NQ--LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL--YDD------RGVQQIMDT 160 (322)
T ss_dssp TE--EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSS--CCT------TCHHHHHHH
T ss_pred Cc--EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCccc--ccc------cccceehcc
Confidence 65 55554445588888765532 22221 1134678888872335555432100 000 000000111
Q ss_pred eccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeE-EeeccCCcEEEEEccccceeeccccccCCCCCCCC
Q 016185 172 VGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI-ASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
+..++.|..+|..+++...... .......++++| +++.| ++-...+.|..|++......
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~----~~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~--------------- 220 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLK----ELHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKG--------------- 220 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEE----EESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTT---------------
T ss_pred cCCCceEEEEeCCCCEEEEecc----CCccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCC---------------
Confidence 2235778888877665433322 223446799999 77644 45466789999998752100
Q ss_pred ccccccceeeeecCCCceEEEEEe--CcEEEEeec----------CCeEEEecCCCCCCCCCCCcceecccccCC----C
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSV----------DNEIVLWEPKMKEQSPGEGTADILQKYPVP----E 314 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~----------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~----~ 314 (394)
....... ... ...++++ |++.++... .+.|..+|.. ++ .+..+... .
T Consensus 221 ---~~~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~---------~~~~~~~~~g~~~ 283 (322)
T 2fp8_A 221 ---TAEVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GN---------ILEVIPLPPPFAG 283 (322)
T ss_dssp ---CEEEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SC---------EEEEEECCTTTTT
T ss_pred ---ccceEEe---CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CC---------EEEEEECCCCCcc
Confidence 0001111 112 5667776 665555443 4678888864 32 22222222 1
Q ss_pred CCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 315 CDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 315 ~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
..+..+++ .++ .++++....+.|..+++...
T Consensus 284 ~~~~~~~~-~~g--~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 284 EHFEQIQE-HDG--LLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp SCCCEEEE-ETT--EEEEECSSCSEEEEEEC---
T ss_pred ccceEEEE-eCC--EEEEeecCCCceEEEecccc
Confidence 33555655 344 45666667788999988654
No 267
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.64 E-value=8.2e-06 Score=74.91 Aligned_cols=74 Identities=9% Similarity=0.027 Sum_probs=47.2
Q ss_pred cceEEEEecCCcEEEEEcCCCceeEEeeecccCCcc---cc-eEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEE
Q 016185 48 YFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKE---ES-FYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKS 123 (394)
Q Consensus 48 ~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~---~~-v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 123 (394)
++.+++.+..++|.-+|..+|+.+-........... .. -..+++ .+. .++.++.|+.|.-+|..+++.+.+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~----~~~-~v~~~t~dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI----YGD-KVFFGTLDASVVALNKNTGKVVWK 142 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE----ETT-EEEEEETTTEEEEEESSSCCEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE----ECC-EEEEEeCCCEEEEEECCCCCEEee
Confidence 456666665466999999999987665532111000 00 011122 234 688888999999999999999888
Q ss_pred EEe
Q 016185 124 FVG 126 (394)
Q Consensus 124 ~~~ 126 (394)
...
T Consensus 143 ~~~ 145 (582)
T 1flg_A 143 KKF 145 (582)
T ss_dssp EEC
T ss_pred ecC
Confidence 764
No 268
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.62 E-value=6.1e-05 Score=60.70 Aligned_cols=218 Identities=11% Similarity=0.075 Sum_probs=131.9
Q ss_pred EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEE
Q 016185 124 FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVL 203 (394)
Q Consensus 124 ~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~ 203 (394)
+.+-...+..++|+|+++.++++... ++.|...|.. ++.++.+.. +-.....
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~-------------------------~~~I~~ld~~-g~v~~~i~l--~g~~D~E 73 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINK-------------------------PAAIVEMTTN-GDLIRTIPL--DFVKDLE 73 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEET-------------------------TEEEEEEETT-CCEEEEEEC--SSCSSEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECC-------------------------CCeEEEEeCC-CCEEEEEec--CCCCChH
Confidence 33445679999999965556666666 8889999987 888877752 2235678
Q ss_pred EEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEe
Q 016185 204 SVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSK 281 (394)
Q Consensus 204 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~ 281 (394)
.|++.+ ++.++++.-.++.+.++++.......... ....++. ..........++|+ ++.|+++
T Consensus 74 GIa~~~-~g~~~vs~E~~~~l~~~~v~~~~~i~~~~-------------~~~~~~~-~~~~N~g~EGLA~d~~~~~L~va 138 (255)
T 3qqz_A 74 TIEYIG-DNQFVISDERDYAIYVISLTPNSEVKILK-------------KIKIPLQ-ESPTNCGFEGLAYSRQDHTFWFF 138 (255)
T ss_dssp EEEECS-TTEEEEEETTTTEEEEEEECTTCCEEEEE-------------EEECCCS-SCCCSSCCEEEEEETTTTEEEEE
T ss_pred HeEEeC-CCEEEEEECCCCcEEEEEcCCCCeeeeee-------------eeccccc-cccccCCcceEEEeCCCCEEEEE
Confidence 899988 88877776677889999887632100000 0000000 01234457889998 4456666
Q ss_pred ecCCeEEEecCCCCCCCCCCCcceeccc----ccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEec
Q 016185 282 SVDNEIVLWEPKMKEQSPGEGTADILQK----YPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLS 357 (394)
Q Consensus 282 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 357 (394)
.......+|.... ..... ....... -......+..+++.|... .+++.....+.|.++|.... ......+.
T Consensus 139 ~E~~p~~i~~~~g-~~~~~--~l~i~~~~~~~~~~~~~d~S~l~~dp~tg-~lliLS~~s~~L~~~d~~g~-~~~~~~L~ 213 (255)
T 3qqz_A 139 KEKNPIEVYKVNG-LLSSN--ELHISKDKALQRQFTLDDVSGAEFNQQKN-TLLVLSHESRALQEVTLVGE-VIGEMSLT 213 (255)
T ss_dssp EESSSEEEEEEES-TTCSS--CCEEEECHHHHHTCCSSCCCEEEEETTTT-EEEEEETTTTEEEEECTTCC-EEEEEECS
T ss_pred ECcCCceEEEEcc-cccCC--ceeeecchhhccccccCCceeEEEcCCCC-eEEEEECCCCeEEEEcCCCC-EEEEEEcC
Confidence 6554445555441 10000 1111100 111234578999999875 67777788888999997644 33444444
Q ss_pred cCCc-----cCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 358 HAQS-----KSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 358 ~~~~-----~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
...+ -...-.|+|.++|++.++ ++...++++.
T Consensus 214 ~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 214 KGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp TTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 2111 136789999999985554 6777777765
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.62 E-value=0.00022 Score=62.30 Aligned_cols=225 Identities=7% Similarity=-0.107 Sum_probs=134.6
Q ss_pred EEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEE
Q 016185 100 FLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVR 179 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 179 (394)
+|+.+. ...|+..++........+. ....+..++|++.++.++++-.. .+.|+
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~-------------------------~~~I~ 137 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS-------------------------QRMIC 137 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETT-------------------------TTEEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecC-------------------------CCeEE
Confidence 444443 4678888887655444433 45678899999866666666555 78898
Q ss_pred EEEecCC----cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccc
Q 016185 180 LWNVQTG----ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 255 (394)
Q Consensus 180 vwd~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (394)
.+++... .....+. ........+++++..++++++-...+.|.+.++....
T Consensus 138 ~~~~~g~~~~~~~~~~~~---~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~---------------------- 192 (400)
T 3p5b_L 138 STQLDRAHGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---------------------- 192 (400)
T ss_dssp EEEC------CCCEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCS----------------------
T ss_pred EEEcccCCCCCcceEEEe---CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCc----------------------
Confidence 8988652 2223332 2345677889887466777777778889998887621
Q ss_pred cceeeeecCCCceEEEEEe--CcEEEEee-c-CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceE
Q 016185 256 FPVFIASVHSNYVDCNRWL--GDFILSKS-V-DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAA 331 (394)
Q Consensus 256 ~~~~~~~~~~~~i~~~~~~--~~~l~~~~-~-dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 331 (394)
....+.........|+++ +.+|+... . .+.|...++..... .......-.....|++++++. .+.
T Consensus 193 -~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~---------~~~~~~~l~~P~glavd~~~~-~lY 261 (400)
T 3p5b_L 193 -RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---------YSLVTENIQWPNGITLDLLSG-RLY 261 (400)
T ss_dssp -EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---------EEEECSSCSCEEEEEEETTTT-EEE
T ss_pred -eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---------EEEEECCCCceEEEEEEeCCC-EEE
Confidence 112222233446777776 34444333 2 47888888875431 111112224568899998774 445
Q ss_pred EEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 332 AIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 332 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
++-...+.|..+|+.......+.... .......++++. .+.++.+-...+.|..+|
T Consensus 262 ~aD~~~~~I~~~d~dG~~~~~~~~~~--~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 262 WVDSKLHSISSIDVNGGNRKTILEDE--KRLAHPFSLAVF-EDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp EEETTTTEEEEEETTSCCCEEEEECS--STTSSEEEEEEE-TTEEEEEESSSCSEEEEE
T ss_pred EEECCCCEEEEEeCCCCccEEEEeCC--CCCCCCEEEEEe-CCEEEEecCCCCeEEEEE
Confidence 55556788999998765433333221 223456677773 334455555667788777
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.58 E-value=0.00015 Score=58.46 Aligned_cols=211 Identities=5% Similarity=0.005 Sum_probs=126.8
Q ss_pred CcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEe-cCCceeEEEEcCCCCcEEEEceeeeEEeeccce
Q 016185 81 DKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVG-HGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159 (394)
Q Consensus 81 ~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~ 159 (394)
+....+..+++. |++..+.++...++.|...|.. ++.++.+.- -......+++.+ ++.++++.-.
T Consensus 24 g~~~~lSGla~~--~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~---------- 89 (255)
T 3qqz_A 24 GITNNISSLTWS--AQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDER---------- 89 (255)
T ss_dssp TCCSCEEEEEEE--TTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETT----------
T ss_pred CcccCcceeEEe--CCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECC----------
Confidence 455678999998 8766356667788999999987 888888752 224577888887 6666666555
Q ss_pred eeeeeeccceeeeccCCcEEEEEecCCcE---EEEeec---cCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccc
Q 016185 160 CLLLFIRSNCLRVGQDESVRLWNVQTGIC---ILIFAG---AGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFW 233 (394)
Q Consensus 160 ~~~~~~~~~~~~~~~d~~i~vwd~~~~~~---~~~~~~---~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 233 (394)
++.+.++++..... +..... ..........++|+| .++.|+++.......+|.+....
T Consensus 90 ---------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~ 153 (255)
T 3qqz_A 90 ---------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLL 153 (255)
T ss_dssp ---------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTT
T ss_pred ---------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccc
Confidence 77888888765442 222221 012345678999999 66556666665556666665210
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe---CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY 310 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 310 (394)
... . . .....+...-..+...+.+++++ +.+++....+..+..+|...... ....+
T Consensus 154 ~~~--~---------l--~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~--------~~~~L 212 (255)
T 3qqz_A 154 SSN--E---------L--HISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI--------GEMSL 212 (255)
T ss_dssp CSS--C---------C--EEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE--------EEEEC
T ss_pred cCC--c---------e--eeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEE--------EEEEc
Confidence 000 0 0 00000000001123346788887 66777778888999999775411 11111
Q ss_pred c-------CCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEe
Q 016185 311 P-------VPECDIWFIKFSCDFHYNAAAIGNREGKIFVWEL 345 (394)
Q Consensus 311 ~-------~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 345 (394)
. ..-..-..|+|.+++ + |+..++-+.++.|.-
T Consensus 213 ~~g~~~l~~~~~qpEGia~d~~G--~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 213 TKGSRGLSHNIKQAEGVAMDASG--N-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp STTGGGCSSCCCSEEEEEECTTC--C-EEEEETTTEEEEEEC
T ss_pred CCccCCcccccCCCCeeEECCCC--C-EEEEcCCceEEEEEe
Confidence 1 112356789999999 3 555577776666643
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.57 E-value=0.0003 Score=61.41 Aligned_cols=231 Identities=5% Similarity=-0.068 Sum_probs=137.1
Q ss_pred eEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC----eeEEEEE
Q 016185 50 NVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----KLHKSFV 125 (394)
Q Consensus 50 ~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~ 125 (394)
.+|+.+....|+..++........+. ....+..++|. +.+..+.++-...+.|+.+++... .....+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~------~~~~~~~l~~d--~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIP------NLRNVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEEC------SCSCEEEEEEE--TTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred ceeEEeccceeEEEccCCcceeEecc------ccCcceEEeee--eccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 35555555669999987665444433 23455677776 755535556566788999998652 2222333
Q ss_pred ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEE
Q 016185 126 GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSV 205 (394)
Q Consensus 126 ~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~ 205 (394)
........+++.+.+++++++-.. .+.|.+.+++.......+. ........|
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~-------------------------~~~I~~~~~~g~~~~~l~~---~~~~~P~~i 207 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSV-------------------------LGTVSVADTKGVKRKTLFR---ENGSKPRAI 207 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETT-------------------------TTEEEEECTTTCSEEEEEE---CSSCCEEEE
T ss_pred CCCCCcccEEEEecCCceEEEECC-------------------------CCeEEEEeCCCCceEEEEe---CCCCCcceE
Confidence 234456788888756667777666 7889999987555444443 244557899
Q ss_pred EecCCCCeeEEeecc-CCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEe
Q 016185 206 DFHPSDIYRIASCGM-DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSK 281 (394)
Q Consensus 206 ~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~ 281 (394)
+++|..+.++++-.. .+.|...++.... ........-.....|+++ ++ +.++-
T Consensus 208 avdp~~g~ly~td~~~~~~I~~~~~dG~~-----------------------~~~~~~~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 208 VVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------IYSLVTENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp EEETTTTEEEEEECSSSCCEEEEETTSCS-----------------------CEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEecccCeEEEEeCCCCCEEEEEeCCCCc-----------------------cEEEEECCCCceEEEEEEeCCCEEEEEE
Confidence 999845555555433 4678888876521 111122223456778887 44 44444
Q ss_pred ecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 282 SVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 282 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
...+.|..+|+..... ..+............+++. .+ .++++-...+.|..+|..+++
T Consensus 265 ~~~~~I~~~d~dG~~~-------~~~~~~~~~l~~P~gl~v~-~~--~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 265 SKLHSISSIDVNGGNR-------KTILEDEKRLAHPFSLAVF-ED--KVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp TTTTEEEEEETTSCCC-------EEEEECSSTTSSEEEEEEE-TT--EEEEEESSSCSEEEEESSSCC
T ss_pred CCCCEEEEEeCCCCcc-------EEEEeCCCCCCCCEEEEEe-CC--EEEEecCCCCeEEEEEcCCCC
Confidence 5678899999875431 1111111112234566663 23 466677777889999866664
No 272
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.55 E-value=6.8e-05 Score=63.52 Aligned_cols=236 Identities=12% Similarity=0.016 Sum_probs=130.7
Q ss_pred EEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEec--------------------CCceeEEEEcCCCCcEEEEc
Q 016185 88 TVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGH--------------------GDSINEIRTQPLKPSLVVSA 147 (394)
Q Consensus 88 ~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--------------------~~~v~~~~~~~~~~~~l~s~ 147 (394)
.++|. ++|. +++++..++.|..|+...++. ..+... ...+..+++.+++++++++
T Consensus 23 ~i~~d--~~g~-~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~- 97 (322)
T 2fp8_A 23 SFTFD--STNK-GFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV- 97 (322)
T ss_dssp CEECC--TTCS-SEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE-
T ss_pred EEEEc--CCCC-EEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE-
Confidence 36666 8887 788888899999999776543 333211 1246788888634444444
Q ss_pred eeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeec-cCC-CcccEEEEEecCCCCeeEEeecc-----
Q 016185 148 SKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAG-AGG-HRNEVLSVDFHPSDIYRIASCGM----- 220 (394)
Q Consensus 148 ~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~l~s~~~----- 220 (394)
.. .+.|..+|..+++. ..+.. ..+ .......+++.+.++++.++-..
T Consensus 98 d~-------------------------~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~ 151 (322)
T 2fp8_A 98 DC-------------------------YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDD 151 (322)
T ss_dssp ET-------------------------TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCT
T ss_pred EC-------------------------CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccc
Confidence 33 44577788665432 22221 001 11346778888723454444321
Q ss_pred ------------CCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEEe-ecCC
Q 016185 221 ------------DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSK-SVDN 285 (394)
Q Consensus 221 ------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~-~~dg 285 (394)
++.|..||..+++. ..+.........++++ ++.++.+ ...+
T Consensus 152 ~~~~~~~~~~~~~g~v~~~d~~~~~~------------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~ 207 (322)
T 2fp8_A 152 RGVQQIMDTSDKTGRLIKYDPSTKET------------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSH 207 (322)
T ss_dssp TCHHHHHHHTCCCEEEEEEETTTTEE------------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGT
T ss_pred cccceehcccCCCceEEEEeCCCCEE------------------------EEeccCCccCcceEECCCCCEEEEEeCCCC
Confidence 36677777765221 1111111233457776 5555444 5678
Q ss_pred eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeC----------CCcEEEEEecCCCceeeEE
Q 016185 286 EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR----------EGKIFVWELQSSPPVLIAR 355 (394)
Q Consensus 286 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~ 355 (394)
.|.+|++..... ...+.+.... . ...+++.+++ ++.++... .+.|..+|.. + ..+..
T Consensus 208 ~I~~~~~~~~~~----~~~~~~~~~~---g-P~gi~~d~~G--~l~va~~~~~~~~~~~~~~~~v~~~d~~-G--~~~~~ 274 (322)
T 2fp8_A 208 QIVKYWLEGPKK----GTAEVLVKIP---N-PGNIKRNADG--HFWVSSSEELDGNMHGRVDPKGIKFDEF-G--NILEV 274 (322)
T ss_dssp EEEEEESSSTTT----TCEEEEEECS---S-EEEEEECTTS--CEEEEEEEETTSSTTSCEEEEEEEECTT-S--CEEEE
T ss_pred eEEEEECCCCcC----CccceEEeCC---C-CCCeEECCCC--CEEEEecCcccccccCCCccEEEEECCC-C--CEEEE
Confidence 999999875321 1111122221 2 6778899888 34444333 4567777754 3 24444
Q ss_pred eccC-Cc-cCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 356 LSHA-QS-KSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 356 ~~~~-~~-~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
+... +. ...++.+++ .+++++++...++.|.++++.
T Consensus 275 ~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 275 IPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred EECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4411 11 245677776 466666666678899999875
No 273
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.54 E-value=8.6e-06 Score=76.33 Aligned_cols=251 Identities=12% Similarity=-0.006 Sum_probs=127.1
Q ss_pred C-CCCcEEEEeecCC-----------eEEEEECCCCeeE--EEEEe-cCCceeEEEEcCCCCcEEEEceeeeEEeeccce
Q 016185 95 V-DGIPFLVAGGING-----------IIRVIDVSNEKLH--KSFVG-HGDSINEIRTQPLKPSLVVSASKVIIISSLSLI 159 (394)
Q Consensus 95 ~-~~~~~l~s~~~dg-----------~i~vwd~~~~~~~--~~~~~-~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~ 159 (394)
+ +++ +++.|+.+. .+.+||+.+++.. ..+.. +.....++++.. ++.+++.|+.
T Consensus 195 ~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~---------- 262 (656)
T 1k3i_A 195 PTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGN---------- 262 (656)
T ss_dssp TTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSS----------
T ss_pred ecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCC----------
Confidence 6 777 777776542 5889998877532 23322 223344567777 6778888774
Q ss_pred eeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeec-cC-----CcEEEEEccccc
Q 016185 160 CLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCG-MD-----NTVKIWSMKEFW 233 (394)
Q Consensus 160 ~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~-~d-----g~v~iwd~~~~~ 233 (394)
.+..+.+||..+++....-. +. ....-.+++..+ ++++++.|+ .+ ..+.+||..+..
T Consensus 263 --------------~~~~v~~yd~~t~~W~~~~~-~~-~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 263 --------------DAKKTSLYDSSSDSWIPGPD-MQ-VARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp --------------STTCEEEEEGGGTEEEECCC-CS-SCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred --------------CCCceEEecCcCCceeECCC-CC-ccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 14589999998876543322 10 111113445556 788888888 34 568999988743
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccC-
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPV- 312 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~- 312 (394)
-.........+.+.. .. .....+.+.+..+......+........+..||..+.... ........
T Consensus 326 W~~~~~~~~~p~~~~------~~--~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~------~~~~~~~~~ 391 (656)
T 1k3i_A 326 WTSLPNAKVNPMLTA------DK--QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDV------KSAGKRQSN 391 (656)
T ss_dssp EEEETTSCSGGGCCC------CT--TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEE------EEEEECEET
T ss_pred ceeCCCccccccccc------cc--cceeecCCceEEEECCCCcEEEecCccceeeeecCCccee------ecCCccccc
Confidence 211100000000000 00 0000111112111111111112223456788888765310 01111110
Q ss_pred -----CCCCeEEEEEee-cCCcceEEEEeCCC-----------cEEEEEecCCCceeeE--EeccCCccCCeeEEEeccC
Q 016185 313 -----PECDIWFIKFSC-DFHYNAAAIGNREG-----------KIFVWELQSSPPVLIA--RLSHAQSKSPIRQTAMSYD 373 (394)
Q Consensus 313 -----~~~~i~~~~~~~-~~~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~--~~~~~~~~~~v~~~~~s~~ 373 (394)
....-.++.|.. ++ .+++.|+.++ .|.+||..+.....+. .+. ....-.+++..|+
T Consensus 392 ~~~~~~~~~~~av~~~~~~~--~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp---~~R~~~~~~~l~~ 466 (656)
T 1k3i_A 392 RGVAPDAMCGNAVMYDAVKG--KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY---FARTFHTSVVLPD 466 (656)
T ss_dssp TEECCCCBTCEEEEEETTTT--EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS---SCCBSCEEEECTT
T ss_pred cccCCCCCCCceEeccCCCC--eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC---CCcccCCeEECCC
Confidence 111223444443 44 6788887543 6778887776432222 222 1111234566789
Q ss_pred CCEEEEeccC-----------CeEEEEEcCC
Q 016185 374 GSTILSCCED-----------GAIWRWDAIP 393 (394)
Q Consensus 374 ~~~l~s~~~d-----------g~i~iwd~~~ 393 (394)
+++++.|+.+ ..+.+||..+
T Consensus 467 g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 467 GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp SCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 9999999865 4688998753
No 274
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.52 E-value=0.00031 Score=59.15 Aligned_cols=228 Identities=8% Similarity=-0.021 Sum_probs=133.2
Q ss_pred EEEEecCCcEEEEEcCCCc--eeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeE-EEEEec
Q 016185 51 VFATVGGNRVTVYQCLEGG--VIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLH-KSFVGH 127 (394)
Q Consensus 51 ~las~~~d~i~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~ 127 (394)
+|+.+....|+..++.... ....+.. ......++|. +.+..+.++-...+.|..+++...... ..+...
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~------~~~~~~ld~d--~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~ 77 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGG------LEDAAAVDFV--FSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG 77 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEE------EEEEEEEEEE--GGGTEEEEEETTTTEEEEEETTSSSCCCEEEEEC
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecC------CCccEEEEEE--eCCCEEEEEECCCCcEEEEEccCCCceEEEEcCC
Confidence 4444555559999987653 2122221 1234456666 654426666677889999998765322 223333
Q ss_pred CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEe
Q 016185 128 GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF 207 (394)
Q Consensus 128 ~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~ 207 (394)
......+++.+.++.++++-.. .+.|.+++++.......+. ........+++
T Consensus 78 l~~p~glavd~~~g~ly~~d~~-------------------------~~~I~~~~~dG~~~~~l~~---~~~~~P~giav 129 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSE-------------------------TNRIEVSNLDGSLRKVLFW---QELDQPRAIAL 129 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETT-------------------------TTEEEEEETTSCSCEEEEC---SSCSSEEEEEE
T ss_pred CCCccEEEEEcCCCeEEEEECC-------------------------CCEEEEEECCCCcEEEEEe---CCCCCccEEEE
Confidence 3456788888756677777666 7889999986543333332 24456789999
Q ss_pred cCCCCeeEEeec-cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEeec
Q 016185 208 HPSDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSV 283 (394)
Q Consensus 208 ~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~ 283 (394)
+|..+.++++-. ..+.|...++.... ........-..-..++++ ++ +.++-+.
T Consensus 130 dp~~g~ly~td~~~~~~I~r~~~dG~~-----------------------~~~~~~~~l~~Pnglavd~~~~~lY~aD~~ 186 (318)
T 3sov_A 130 DPSSGFMYWTDWGEVPKIERAGMDGSS-----------------------RFIIINSEIYWPNGLTLDYEEQKLYWADAK 186 (318)
T ss_dssp EGGGTEEEEEECSSSCEEEEEETTSCS-----------------------CEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCEEEEEecCCCCEEEEEEcCCCC-----------------------eEEEEECCCCCccEEEEeccCCEEEEEECC
Confidence 984455555442 35778887776411 111111122345678887 34 4455556
Q ss_pred CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 284 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 284 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
.+.|..+|+..... +.+. .........+++..+ .++.+-...+.|..++..+++
T Consensus 187 ~~~I~~~d~dG~~~-------~~~~--~~~~~~P~glav~~~---~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 187 LNFIHKSNLDGTNR-------QAVV--KGSLPHPFALTLFED---ILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp TTEEEEEETTSCSC-------EEEE--CSCCSCEEEEEEETT---EEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEcCCCCce-------EEEe--cCCCCCceEEEEeCC---EEEEEecCCCeEEEEECCCCC
Confidence 78899999875321 0111 112234556776432 466666677889999986664
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.50 E-value=0.00056 Score=64.90 Aligned_cols=230 Identities=5% Similarity=-0.071 Sum_probs=133.1
Q ss_pred EEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCC----eeEEEEEe
Q 016185 51 VFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNE----KLHKSFVG 126 (394)
Q Consensus 51 ~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~ 126 (394)
+|+.+....|+..++...+....+. ....+..+++. +....++++-...+.|+.+++... .....+..
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~------~~~~~~gl~~d--~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIP------NLRNVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEEC------SCSSEEEEEEE--TTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred ccccccccceeEeeccCCcceeeec------CCCceEEEeec--ccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec
Confidence 4555555558888877665443333 22344566665 644425666667788999988642 22233332
Q ss_pred cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEE
Q 016185 127 HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVD 206 (394)
Q Consensus 127 ~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~ 206 (394)
.......|++.+.+++++++-.. .+.|.+.++........+. ........|+
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~-------------------------~~~I~v~~ldG~~~~~l~~---~~l~~P~gIa 520 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSV-------------------------LGTVSVADTKGVKRKTLFR---ENGSKPRAIV 520 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETT-------------------------TTEEEEEETTSSSEEEEEE---CTTCCEEEEE
T ss_pred CCCCcceeeeeecCCcEEEEecC-------------------------CCeEEEEeCCCCeEEEEEe---CCCCCcceEE
Confidence 34556789998756677777666 8899999987554433333 3445688999
Q ss_pred ecCCCCeeEEeeccC-CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEee
Q 016185 207 FHPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKS 282 (394)
Q Consensus 207 ~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~ 282 (394)
++|..+.++++-... +.|...++.... ....+...-.....|+++ ++ +.++-.
T Consensus 521 VDp~~g~LYwtD~g~~~~I~~~~~dG~~-----------------------~~~lv~~~l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 521 VDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------IYSLVTENIQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp EETTTTEEEEEECSSSCEEEEEETTSCC-----------------------EEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EecCCCCEEEecCCCCCeEEEEecCCCc-----------------------eEEEEeCCCCCceEEEEecCCCeEEEEeC
Confidence 999446655554333 678888876521 111222223456778877 34 444445
Q ss_pred cCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 283 VDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 283 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
..+.|..+++..... . .+......-.....|++. +. .++++-...+.|...|..+++
T Consensus 578 ~~~~I~~~d~dG~~~------~-~v~~~~~~l~~P~glav~--~~-~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 578 KLHSISSIDVNGGNR------K-TILEDEKRLAHPFSLAVF--ED-KVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp TTTEEEEEETTSCSC------E-EEEECTTTTSSEEEEEEE--TT-EEEEEETTTTEEEEEETTTCC
T ss_pred CCCcEEEEecCCCce------E-EEecCCCccCCCCEEEEe--CC-EEEEEECCCCEEEEEeCCCCc
Confidence 567899999875432 1 111111111223455553 32 356666667888888876664
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.48 E-value=8.3e-05 Score=70.78 Aligned_cols=112 Identities=11% Similarity=0.068 Sum_probs=68.4
Q ss_pred EEEEEEEc-CCCCcEEE-EeecCC----eEEEEECCCC-eeEE-EEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccc
Q 016185 87 YTVSWACN-VDGIPFLV-AGGING----IIRVIDVSNE-KLHK-SFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSL 158 (394)
Q Consensus 87 ~~~~~~~~-~~~~~~l~-s~~~dg----~i~vwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~ 158 (394)
..-.+.++ |||+ +|+ +...+| .|+++|+.++ +.+. .+.. ....+.|+| +++.|+....
T Consensus 175 ~~~~~~~S~PDG~-~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~Wsp-Dg~~l~y~~~--------- 240 (751)
T 2xe4_A 175 DVMEVKPAPPEHD-LVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGP-DHTSLFYVTK--------- 240 (751)
T ss_dssp EEEEEEECTTTTC-EEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECS-STTEEEEEEE---------
T ss_pred EEeeeEecCCCCC-EEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEec-CCCEEEEEEE---------
Confidence 34456788 9999 565 333333 5999999988 6322 1221 245788999 5444444443
Q ss_pred eeeeeeeccceeeeccC-----CcEEEEEecCCc--EEEEeeccCCCcccEEEEEecCCCCeeEEeecc---CCcEEEEE
Q 016185 159 ICLLLFIRSNCLRVGQD-----ESVRLWNVQTGI--CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM---DNTVKIWS 228 (394)
Q Consensus 159 ~~~~~~~~~~~~~~~~d-----~~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~---dg~v~iwd 228 (394)
+ ..|.++++.+++ ....+.. ........+.|+| |+++|+..+. ...|.++|
T Consensus 241 ----------------d~~~~~~~v~~~~lgt~~~~~~lv~~~--~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d 301 (751)
T 2xe4_A 241 ----------------DETLRENKVWRHVMGKLQSEDVCLYEE--HNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLD 301 (751)
T ss_dssp ----------------CTTCCEEEEEEEETTSCGGGCEEEEEC--CCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEE
T ss_pred ----------------CCCCCCCEEEEEECCCCchhcEEEEec--CCCceEEEEEECC-CCCEEEEEecCCCCceEEEEE
Confidence 3 357788887654 2233331 1234567889999 8887765542 34678888
Q ss_pred ccc
Q 016185 229 MKE 231 (394)
Q Consensus 229 ~~~ 231 (394)
+.+
T Consensus 302 ~~~ 304 (751)
T 2xe4_A 302 LRK 304 (751)
T ss_dssp SSS
T ss_pred CCC
Confidence 876
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.46 E-value=0.00042 Score=58.12 Aligned_cols=238 Identities=10% Similarity=-0.024 Sum_probs=128.7
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcE
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPF 100 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 100 (394)
..+....+... .....++|+| +++++++-..++ |..||... +....+. .......+++. ++|+ +
T Consensus 21 ~~~~~~~~p~~-~~pegia~~~----~g~lyv~d~~~~~I~~~d~~g-~~~~~~~------~~~~p~gia~~--~dG~-l 85 (306)
T 2p4o_A 21 PAKIITSFPVN-TFLENLASAP----DGTIFVTNHEVGEIVSITPDG-NQQIHAT------VEGKVSGLAFT--SNGD-L 85 (306)
T ss_dssp CEEEEEEECTT-CCEEEEEECT----TSCEEEEETTTTEEEEECTTC-CEEEEEE------CSSEEEEEEEC--TTSC-E
T ss_pred CceEeEeCCCC-CCcceEEECC----CCCEEEEeCCCCeEEEECCCC-ceEEEEe------CCCCceeEEEc--CCCc-E
Confidence 34444445332 5678899998 678777775555 99999654 3333332 12345566665 8998 5
Q ss_pred EEEeec-C-CeEEEEECCCCeeEEEEEe-cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCc
Q 016185 101 LVAGGI-N-GIIRVIDVSNEKLHKSFVG-HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDES 177 (394)
Q Consensus 101 l~s~~~-d-g~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~ 177 (394)
+++... + ..|..+|..+++....... .......++..+ ++..+++... ++.
T Consensus 86 ~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~-------------------------~g~ 139 (306)
T 2p4o_A 86 VATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSY-------------------------RGA 139 (306)
T ss_dssp EEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETT-------------------------TTE
T ss_pred EEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccC-CCcEEEEECC-------------------------CCe
Confidence 555433 2 2477777777765433221 112234444444 4455555445 788
Q ss_pred EEEEEecCCcE-EEEeec------cCCCcccEEEEEecCCCC-eeEEeeccCCcEEEEEccc-cceeeccccccCCCCCC
Q 016185 178 VRLWNVQTGIC-ILIFAG------AGGHRNEVLSVDFHPSDI-YRIASCGMDNTVKIWSMKE-FWTYVEKSFTWTDLPSK 248 (394)
Q Consensus 178 i~vwd~~~~~~-~~~~~~------~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~ 248 (394)
|.++|...++. +..... ..........+ +| ++ .++++-...+.|..+++.. +....
T Consensus 140 i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~-dg~~lyv~d~~~~~I~~~~~~~~g~~~~------------ 204 (306)
T 2p4o_A 140 IWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR-FGNFLYVSNTEKMLLLRIPVDSTDKPGE------------ 204 (306)
T ss_dssp EEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE-ETTEEEEEETTTTEEEEEEBCTTSCBCC------------
T ss_pred EEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc-CCCEEEEEeCCCCEEEEEEeCCCCCCCc------------
Confidence 88888765432 211110 00111234555 66 55 5566666788999999875 11000
Q ss_pred CCccccccceeeeecCCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEe---
Q 016185 249 FPTKYVQFPVFIASVHSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS--- 323 (394)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--- 323 (394)
....... .....++++ |++.++....+.|.++|.. ++. ..+..........++++|.
T Consensus 205 ------~~~~~~~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~-------~~~~~~~~~~~~p~~~a~~g~~ 266 (306)
T 2p4o_A 205 ------PEIFVEQ----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST-------TIIAQAEQGVIGSTAVAFGQTE 266 (306)
T ss_dssp ------CEEEEES----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE-------EEEECGGGTCTTEEEEEECCST
T ss_pred ------cEEEecc----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE-------EEEeecccccCCceEEEEeccc
Confidence 0001111 233456665 7677776678899999975 321 0122233333467889998
Q ss_pred ecCCcceEEEEe
Q 016185 324 CDFHYNAAAIGN 335 (394)
Q Consensus 324 ~~~~~~~l~~~~ 335 (394)
|++. .|++.+
T Consensus 267 ~d~~--~LyVt~ 276 (306)
T 2p4o_A 267 GDCT--AIYVVT 276 (306)
T ss_dssp TTTT--EEEEEE
T ss_pred CCCC--EEEEEC
Confidence 7764 444433
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.43 E-value=0.00053 Score=57.75 Aligned_cols=202 Identities=8% Similarity=-0.078 Sum_probs=118.8
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeE-EeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIA-ALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIR 111 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~ 111 (394)
....+++|.+. .+.++.+-..++ |..+++..+.... .+.. .-.....+++. +.+..+.++-...+.|.
T Consensus 35 ~~~~~ld~d~~---~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~-----~l~~p~glavd--~~~g~ly~~d~~~~~I~ 104 (318)
T 3sov_A 35 EDAAAVDFVFS---HGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-----GLLSPDGLACD--WLGEKLYWTDSETNRIE 104 (318)
T ss_dssp EEEEEEEEEGG---GTEEEEEETTTTEEEEEETTSSSCCCEEEEE-----CCSCCCEEEEE--TTTTEEEEEETTTTEEE
T ss_pred CccEEEEEEeC---CCEEEEEECCCCcEEEEEccCCCceEEEEcC-----CCCCccEEEEE--cCCCeEEEEECCCCEEE
Confidence 35678899972 456666655555 8899977653211 1111 11123346665 64543666666778999
Q ss_pred EEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEc-eeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEE
Q 016185 112 VIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSA-SKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICIL 190 (394)
Q Consensus 112 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 190 (394)
++++........+.........+++.|.++.++++- +. .+.|...+++......
T Consensus 105 ~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~-------------------------~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 105 VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE-------------------------VPKIERAGMDGSSRFI 159 (318)
T ss_dssp EEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS-------------------------SCEEEEEETTSCSCEE
T ss_pred EEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC-------------------------CCEEEEEEcCCCCeEE
Confidence 999764332222223345568899998555555553 22 4678777775333222
Q ss_pred EeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEE
Q 016185 191 IFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 270 (394)
Q Consensus 191 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (394)
... ..-.....|+++|.++.++++-+..+.|..+|+.... ..............
T Consensus 160 ~~~---~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-----------------------~~~~~~~~~~~P~g 213 (318)
T 3sov_A 160 IIN---SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-----------------------RQAVVKGSLPHPFA 213 (318)
T ss_dssp EEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-----------------------CEEEECSCCSCEEE
T ss_pred EEE---CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-----------------------eEEEecCCCCCceE
Confidence 222 2234568999998456666666677889999987521 11111122334456
Q ss_pred EEEe-CcEEEEeecCCeEEEecCCCCC
Q 016185 271 NRWL-GDFILSKSVDNEIVLWEPKMKE 296 (394)
Q Consensus 271 ~~~~-~~~l~~~~~dg~i~~~d~~~~~ 296 (394)
++++ +.++++-...+.|..++..+++
T Consensus 214 lav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 214 LTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 6666 4455565667889999987665
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.42 E-value=0.00047 Score=63.34 Aligned_cols=168 Identities=10% Similarity=0.028 Sum_probs=90.9
Q ss_pred EEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee------cCCeEEEEECCCCeeEEEE
Q 016185 52 FATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG------INGIIRVIDVSNEKLHKSF 124 (394)
Q Consensus 52 las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~ 124 (394)
++.++.++ +.-+|..+|+.+-....... .....+...-.. .++ .++.++ .+|.|+-+|.++++.+.++
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~-~~~~~~~ssP~v--~~g--~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDI-KVGSTLTIAPYV--VKD--KVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCG-GGTCBCCSCCEE--ETT--EEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCC-CccceeecCCEE--ECC--EEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 55565555 99999999988655442110 000111111011 234 455554 3899999999999999888
Q ss_pred EecCCce--------------------------------------eEEEEcCCCCcEEEEceeeeEEeeccceeeeeeec
Q 016185 125 VGHGDSI--------------------------------------NEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIR 166 (394)
Q Consensus 125 ~~~~~~v--------------------------------------~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~ 166 (394)
....... ..+++.+ ...+++.+...-..|.... .+.
T Consensus 199 ~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~~~-----r~g 272 (599)
T 1w6s_A 199 YATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNETM-----RPG 272 (599)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGG-----SCS
T ss_pred cCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccCcc-----cCC
Confidence 7432110 0233444 2233333332000000000 000
Q ss_pred cceeeeccCCcEEEEEecCCcEEEEeeccCCCc--------ccEEEEEec-CCCC---eeEEeeccCCcEEEEEccccce
Q 016185 167 SNCLRVGQDESVRLWNVQTGICILIFAGAGGHR--------NEVLSVDFH-PSDI---YRIASCGMDNTVKIWSMKEFWT 234 (394)
Q Consensus 167 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~~---~~l~s~~~dg~v~iwd~~~~~~ 234 (394)
++++ .+.|..+|.++|+....++.. .|. .++. +... . ++ ..++.++.+|.+.++|.++++.
T Consensus 273 d~~y----~~sv~Ald~~TG~~~W~~q~~-~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 273 DNKW----TMTIFGRDADTGEAKFGYQKT-PHDEWDYAGVNVMML-SEQKDK-DGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp CCTT----SSEEEEEETTTCCEEEEEESS-TTCSSCCCCCCCCEE-EEEECT-TSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred Cccc----cceEEEEeCCCCceeeEeecC-CCccccccCCCccEE-Eecccc-CCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 1111 147999999999998887732 121 2222 2222 3 55 5778889999999999999766
Q ss_pred eec
Q 016185 235 YVE 237 (394)
Q Consensus 235 ~~~ 237 (394)
...
T Consensus 346 lw~ 348 (599)
T 1w6s_A 346 VSA 348 (599)
T ss_dssp EEE
T ss_pred eec
Confidence 443
No 280
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.42 E-value=0.0005 Score=63.17 Aligned_cols=59 Identities=10% Similarity=-0.020 Sum_probs=40.9
Q ss_pred CcEEEEEecCCcEEEEeeccCCCc--------ccEEEEEec-CCCC---eeEEeeccCCcEEEEEccccceeec
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHR--------NEVLSVDFH-PSDI---YRIASCGMDNTVKIWSMKEFWTYVE 237 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~--------~~i~~~~~~-~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~ 237 (394)
+.|..+|.++|+....++.. .|. .++. +... . ++ ..++.++.+|.++++|..+++....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~-~~d~wd~~~~~~p~l-~~~~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 361 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHT-PNDAWDFSGNNELVL-FDYKAK-DGKIVKATAHADRNGFFYVVDRSNGKLQNA 361 (582)
T ss_dssp SEEEEECTTTCCEEEEEESS-TTCCSCCCCCCCCEE-EEEECS-SSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCC-CCCcccccCCCCcEE-EeeecC-CCCEEEEEEEECCCceEEEEECCCCCEecc
Confidence 68999999999998887631 121 2222 2221 3 45 4788899999999999998765443
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.33 E-value=0.0016 Score=61.76 Aligned_cols=220 Identities=7% Similarity=-0.120 Sum_probs=126.9
Q ss_pred CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 107 NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 107 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
...|+..++........+. ....+..|+|.+.++.++++-.. .+.|+.+++...
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~-------------------------~~~I~~~~l~g~ 456 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS-------------------------QRMICSTQLDRA 456 (791)
T ss_dssp BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETT-------------------------TTEEEEEEC---
T ss_pred ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeecc-------------------------ceeEEEEeccCC
Confidence 3457777776554433333 44567889998856666666665 788988888642
Q ss_pred ----cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee
Q 016185 187 ----ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 262 (394)
Q Consensus 187 ----~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (394)
.....+. ........|++++..++++++-...+.|.+.++.... ....+.
T Consensus 457 ~~~~~~~~vi~---~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-----------------------~~~l~~ 510 (791)
T 3m0c_C 457 HGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-----------------------RKTLFR 510 (791)
T ss_dssp -----CEEEEC---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-----------------------EEEEEE
T ss_pred CCCcceeEEEe---cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-----------------------EEEEEe
Confidence 2223332 2345567888887455777777788899999987621 111222
Q ss_pred cCCCceEEEEEe--CcEEEEee-c-CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCC
Q 016185 263 VHSNYVDCNRWL--GDFILSKS-V-DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 338 (394)
Q Consensus 263 ~~~~~i~~~~~~--~~~l~~~~-~-dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 338 (394)
........|+++ ..+|+.+. . .+.|...++..... .......-.....|++.+... .++++=...+
T Consensus 511 ~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~---------~~lv~~~l~~P~GLavD~~~~-~LYwaD~~~~ 580 (791)
T 3m0c_C 511 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---------YSLVTENIQWPNGITLDLLSG-RLYWVDSKLH 580 (791)
T ss_dssp CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE---------EEEECSSCSCEEEEEEETTTT-EEEEEETTTT
T ss_pred CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce---------EEEEeCCCCCceEEEEecCCC-eEEEEeCCCC
Confidence 233456778886 33444333 3 37888888875431 111122224578899997764 3445545667
Q ss_pred cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 339 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
.|..+++.......+..-. .......+|++..+ .+.++-...+.|...|.
T Consensus 581 ~I~~~d~dG~~~~~v~~~~--~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 581 SISSIDVNGGNRKTILEDE--KRLAHPFSLAVFED-KVFWTDIINEAIFSANR 630 (791)
T ss_dssp EEEEEETTSCSCEEEEECT--TTTSSEEEEEEETT-EEEEEETTTTEEEEEET
T ss_pred cEEEEecCCCceEEEecCC--CccCCCCEEEEeCC-EEEEEECCCCEEEEEeC
Confidence 8999998765433332211 22234556776432 33334445566776653
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=0.00096 Score=58.85 Aligned_cols=155 Identities=10% Similarity=0.074 Sum_probs=95.1
Q ss_pred ceeEEEEEe-eCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec-CC----
Q 016185 35 PLYAVVFNF-IDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI-NG---- 108 (394)
Q Consensus 35 ~v~~i~~sp-~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~-dg---- 108 (394)
....|+++| . ++.++++-..+.|+.+|+..+....... .......+++. ++|+ +|+.+.. ++
T Consensus 138 ~P~~lavdp~~---~g~Lyv~d~~~~I~~id~~~~~v~~~~~------~~~~P~~ia~d--~~G~-~lyvad~~~~~~~~ 205 (430)
T 3tc9_A 138 GAVWLSFDPKN---HNHLYLVGEQHPTRLIDFEKEYVSTVYS------GLSKVRTICWT--HEAD-SMIITNDQNNNDRP 205 (430)
T ss_dssp CCCEEEEETTE---EEEEEEEEBTEEEEEEETTTTEEEEEEC------CCSCEEEEEEC--TTSS-EEEEEECCSCTTSE
T ss_pred CCCEEEECCCC---CCeEEEEeCCCcEEEEECCCCEEEEEec------CCCCcceEEEe--CCCC-EEEEEeCCCCcccc
Confidence 457899996 2 3555555444449999987655433322 22334566666 9998 5555543 22
Q ss_pred eEEEEECCCCeeE--EEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 109 IIRVIDVSNEKLH--KSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 109 ~i~vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
.+.+.+. .+... ..+.. ......++++|+++.++++-.. ++.|..++...+
T Consensus 206 ~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~-------------------------~~~V~~~~~~~~ 258 (430)
T 3tc9_A 206 NNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWN-------------------------AGQVFRYDFTTQ 258 (430)
T ss_dssp EEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETT-------------------------TTEEEEEETTTT
T ss_pred eEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECC-------------------------CCEEEEEECCCC
Confidence 3444443 33222 33332 3345788899966677766656 788999998766
Q ss_pred cEEEEeeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccc
Q 016185 187 ICILIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 187 ~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~ 231 (394)
........ +.......++|+| +++ ++++-...+.|..++...
T Consensus 259 ~~~~~~~~--~~~~~P~gia~~p-dG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 259 ETTPLFTI--QDSGWEFHIQFHP-SGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEEEEC--SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred cEEEEEEc--CCCCcceeEEEcC-CCCEEEEEECCCCEEEEEeCCc
Confidence 54333321 1224567899999 777 566666788899988764
No 283
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.31 E-value=0.00012 Score=69.67 Aligned_cols=157 Identities=10% Similarity=-0.018 Sum_probs=90.3
Q ss_pred ceeEEEEE-eeCCCcceEEEEecC----C-c-EEEEEcCCC-ceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec
Q 016185 35 PLYAVVFN-FIDSRYFNVFATVGG----N-R-VTVYQCLEG-GVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI 106 (394)
Q Consensus 35 ~v~~i~~s-p~~~~~~~~las~~~----d-~-i~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~ 106 (394)
.+...+|| | ||++||-+.. + . |+++|+.++ +.+.. ........++|+ |||+ .|+....
T Consensus 175 ~~~~~~~S~P----DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------~~~~~~~~~~Ws--pDg~-~l~y~~~ 240 (751)
T 2xe4_A 175 DVMEVKPAPP----EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------KVSGTNGEIVWG--PDHT-SLFYVTK 240 (751)
T ss_dssp EEEEEEECTT----TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------CEEEECSCCEEC--SSTT-EEEEEEE
T ss_pred EEeeeEecCC----CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------cccCceeeEEEe--cCCC-EEEEEEE
Confidence 67889999 9 7888875432 2 2 999999888 63211 001112346777 9998 5555554
Q ss_pred C-----CeEEEEECCCCee--EEEEE-ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcE
Q 016185 107 N-----GIIRVIDVSNEKL--HKSFV-GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESV 178 (394)
Q Consensus 107 d-----g~i~vwd~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i 178 (394)
+ ..|.++++.++.. ...+. ........+.|+| +++.|+..+. ......|
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~----------------------~~~~~~l 297 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQ----------------------SPETAEV 297 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEE----------------------CSSCEEE
T ss_pred CCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEec----------------------CCCCceE
Confidence 4 3688888877642 23333 2233456789999 5565554432 0014468
Q ss_pred EEEEecCCc-EE--EEeeccCCCcccEEEEEecCCCCeeEEeeccC--C--cEEEEEccc
Q 016185 179 RLWNVQTGI-CI--LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD--N--TVKIWSMKE 231 (394)
Q Consensus 179 ~vwd~~~~~-~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d--g--~v~iwd~~~ 231 (394)
.++|+.++. .. ..+.. .......++.|+. ++.+++....+ + .|..+|+.+
T Consensus 298 ~~~d~~~~~~~~~~~~l~~--~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 298 HLLDLRKGNAHNTLEIVRP--REKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEEESSSCTTCCCEEESSC--CCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EEEECCCCCCCceeEEeec--CCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 888887652 22 33321 3345556666664 55555555544 3 455555543
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.26 E-value=8.1e-06 Score=76.70 Aligned_cols=228 Identities=6% Similarity=-0.050 Sum_probs=122.1
Q ss_pred EEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC----CeeEEEEEec
Q 016185 52 FATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN----EKLHKSFVGH 127 (394)
Q Consensus 52 las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----~~~~~~~~~~ 127 (394)
|+.+....|+..++...+....+.. ...+..++|. +.+..+.++-...+.|+.+++.. ......+...
T Consensus 380 ll~~~~~~I~~id~~~~~~~~~~~~------~~~p~gla~d--~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~ 451 (699)
T 1n7d_A 380 LFFTNRHEVRKMTLDRSEYTSLIPN------LRNVVALDTE--VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 451 (699)
T ss_dssp BCCCCTTC-CEECTTSCCEECCSCC------CTTCCCCEEE--TTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSC
T ss_pred EEecCccceEEEeCCCCcceeeecc------CcceEEEccc--cccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCC
Confidence 3333444588888776654433332 1233456776 76652444555678899999865 1221122111
Q ss_pred CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEe
Q 016185 128 GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF 207 (394)
Q Consensus 128 ~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~ 207 (394)
......|++.+.+++++++-.. .+.|.+.++........+. ........|++
T Consensus 452 ~~~P~glavD~~~g~LY~tD~~-------------------------~~~I~v~d~dg~~~~~l~~---~~~~~P~giav 503 (699)
T 1n7d_A 452 IQAPDGLAVDWIHSNIYWTDSV-------------------------LGTVSVADTKGVKRKTLFR---EQGSKPRAIVV 503 (699)
T ss_dssp C--CCCEECCCSSSBCEECCTT-------------------------TSCEEEEBSSSCCEEEECC---CSSCCCCCEEC
T ss_pred CCCcceEEEEeeCCcEEEEecc-------------------------CCeEEEEecCCCceEEEEe---CCCCCcceEEE
Confidence 2234567777545666666555 7889999986544333332 22345678899
Q ss_pred cCCCCeeEEeeccC-CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe---CcEEEEeec
Q 016185 208 HPSDIYRIASCGMD-NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSV 283 (394)
Q Consensus 208 ~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~ 283 (394)
+|..+.++++-... +.|..+++..... .......-.....|+++ +.++++-..
T Consensus 504 Dp~~g~ly~td~~~~~~I~~~~~dG~~~-----------------------~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 504 DPVHGFMYWTDWGTPAKIKKGGLNGVDI-----------------------YSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp CSSSSCCEECCCSSSCCEEBCCSSSCCC-----------------------CEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred ccCCCcEEEcccCCCCeEEEEeCCCCCe-----------------------eEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 98445544443333 6777776654110 00111112234567776 445566667
Q ss_pred CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 284 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 284 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
.+.|..+++...... .+............|++..+ .++++....+.|..++..++
T Consensus 561 ~~~I~~~d~dG~~~~-------~~~~~~~~~~~P~glavd~~---~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 561 LHSISSIDVNGGNRK-------TILEDEKRLAHPFSLAVFED---KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp TTEEEEECSSSSCCE-------EECCCSSSCSSCCCCEEETT---EEEEECSTTTCEEEEETTTE
T ss_pred CCeEEEEccCCCceE-------EEEecCCcCCCceEeEEECC---EEEEEeCCCCeEEEEEccCC
Confidence 789999998753210 11111111112234445433 36666677789999987665
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.24 E-value=0.0021 Score=57.05 Aligned_cols=160 Identities=9% Similarity=0.084 Sum_probs=97.2
Q ss_pred eeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEE-------EEcCCCCcEEEEeecC
Q 016185 36 LYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSW-------ACNVDGIPFLVAGGIN 107 (394)
Q Consensus 36 v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~~l~s~~~d 107 (394)
...|+|+|.+ .++++++..... |++.|+.++......... . ........++| . ++|+ .|+.+...
T Consensus 141 p~~la~dp~~--~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~-~-~~~~~p~~ia~~~~~~~~d--~~G~-~lyvad~~ 213 (496)
T 3kya_A 141 NGRLAFDPLN--KDHLYICYDGHKAIQLIDLKNRMLSSPLNIN-T-IPTNRIRSIAFNKKIEGYA--DEAE-YMIVAIDY 213 (496)
T ss_dssp EEEEEEETTE--EEEEEEEEETEEEEEEEETTTTEEEEEECCT-T-SSCSBEEEEEECCCBTTTB--CTTC-EEEEEECC
T ss_pred CCEEEEccCC--CCEEEEEECCCCeEEEEECCCCEEEEEEccC-c-cccCCCcEEEEeecccccC--CCCC-EEEEEeCC
Confidence 5678999711 355666655444 999997776654433311 1 12234666777 6 8888 56655544
Q ss_pred C-------eEEEEECCC-CeeE-----EEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeecc
Q 016185 108 G-------IIRVIDVSN-EKLH-----KSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQ 174 (394)
Q Consensus 108 g-------~i~vwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 174 (394)
+ .|.+.+... ++.. ..+... .....++.+|+++.++++-..
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~------------------------- 267 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYE------------------------- 267 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETT-------------------------
T ss_pred CCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECC-------------------------
Confidence 3 366665333 2221 233322 234678889977777777777
Q ss_pred CCcEEEEEec-------CCcE-----------EEE-eeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccc
Q 016185 175 DESVRLWNVQ-------TGIC-----------ILI-FAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 175 d~~i~vwd~~-------~~~~-----------~~~-~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~ 231 (394)
++.|..+|+. ++.. ... +.. +.....+.++|+| +++ ++++-+....|+.++...
T Consensus 268 ~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 268 KGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--ADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEEET
T ss_pred CCEEEEEecccccccccCceeecccccccccccceeEec--CCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEecCC
Confidence 8899999997 4543 122 221 2334568999999 877 455556778899877644
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.20 E-value=0.0026 Score=56.05 Aligned_cols=159 Identities=9% Similarity=0.078 Sum_probs=92.9
Q ss_pred ceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC---Ce-E
Q 016185 35 PLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN---GI-I 110 (394)
Q Consensus 35 ~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d---g~-i 110 (394)
....|+|+|+ +.+++++++-....|+.+++.++....... .......+++. ++|+ ++++.... .. +
T Consensus 140 ~P~gvavd~~-s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~------~~~~P~giavd--~dG~-lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 140 NIWRMMFDPN-SNYDDLYWVGQRDAFRHVDFVNQYVDIKTT------NIGQCADVNFT--LNGD-MVVVDDQSSDTNTGI 209 (433)
T ss_dssp CCCEEEECTT-TTTCEEEEECBTSCEEEEETTTTEEEEECC------CCSCEEEEEEC--TTCC-EEEEECCSCTTSEEE
T ss_pred CCceEEEccc-cCCCEEEEEeCCCCEEEEECCCCEEEEeec------CCCCccEEEEC--CCCC-EEEEcCCCCcccceE
Confidence 4678999871 002666666444459999987766543332 22345567766 9998 65555422 12 3
Q ss_pred EEEECCCCee-EEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEE
Q 016185 111 RVIDVSNEKL-HKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICI 189 (394)
Q Consensus 111 ~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 189 (394)
...+...+.. ...+. .......++++|.++.++++-.. ++.|+.+|..++...
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~-------------------------~~~V~~~d~~~g~~~ 263 (433)
T 4hw6_A 210 YLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH-------------------------HAMISSYDPATGTLT 263 (433)
T ss_dssp EEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT-------------------------CSEEEEECTTTCCEE
T ss_pred EEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECC-------------------------CCEEEEEECCCCeEE
Confidence 3333222111 12222 23345678888866666666666 788999998877663
Q ss_pred EEeeccCCCcccEEEEEecCCCCe-eEEeeccCCcEEEEEccc
Q 016185 190 LIFAGAGGHRNEVLSVDFHPSDIY-RIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 190 ~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~ 231 (394)
..+... +....-..++++| +++ ++++-...+.|+.+++..
T Consensus 264 ~~~~~~-~~~~~~~~ia~dp-dG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 264 EEEVMM-DTKGSNFHIVWHP-TGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp EEEEEC-SCCSSCEEEEECT-TSSEEEEEETTTTEEEEEEBCT
T ss_pred EEEecc-CCCCCcccEEEeC-CCCEEEEEeCCCCEEEEEeCCC
Confidence 332211 1222335799999 776 556666678899988763
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.20 E-value=0.0025 Score=56.21 Aligned_cols=243 Identities=10% Similarity=0.007 Sum_probs=129.6
Q ss_pred EEEEEEEcC-CCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCc-EEEEceeeeEEeeccceeeeee
Q 016185 87 YTVSWACNV-DGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPS-LVVSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 87 ~~~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~s~~~~i~~~~~~~~~~~~~ 164 (394)
..+++. | ++. .|+.+...+.|+.+|+..++... +.........++|++ +++ ++++...
T Consensus 140 ~~lavd--p~~~g-~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~-~G~~lyvad~~--------------- 199 (430)
T 3tc9_A 140 VWLSFD--PKNHN-HLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTH-EADSMIITNDQ--------------- 199 (430)
T ss_dssp CEEEEE--TTEEE-EEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECT-TSSEEEEEECC---------------
T ss_pred CEEEEC--CCCCC-eEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeC-CCCEEEEEeCC---------------
Confidence 456666 7 344 56665555889999987665443 333445678999999 555 5555442
Q ss_pred eccceeeeccCC----cEEEEEecCCcEE--EEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecc
Q 016185 165 IRSNCLRVGQDE----SVRLWNVQTGICI--LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 165 ~~~~~~~~~~d~----~i~vwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 238 (394)
++ .+.+.+ ..+... ..+. .......++++|.++.++++-..++.|..++.......
T Consensus 200 ----------~~~~~~~v~~~~-~~g~~~~~~~l~----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--- 261 (430)
T 3tc9_A 200 ----------NNNDRPNNYILT-RESGFKVITELT----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--- 261 (430)
T ss_dssp ----------SCTTSEEEEEEE-GGGTSCSEEEEE----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE---
T ss_pred ----------CCcccceEEEEe-CCCceeeeeeec----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE---
Confidence 22 233333 333221 2222 12335678889855666666667789999998763210
Q ss_pred ccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEeecCCeEEEecCCCCCCCCCCCcceecccc-----
Q 016185 239 SFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY----- 310 (394)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~----- 310 (394)
.+.... .......++++ ++ ++++-...+.|..++......... ....+...
T Consensus 262 ------------------~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~--~~~~~ag~~g~~g 320 (430)
T 3tc9_A 262 ------------------PLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLT--TPYIVCGQQGAKD 320 (430)
T ss_dssp ------------------EEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC--CCEEEEECTTCBC
T ss_pred ------------------EEEEcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccccc--ceEEEeccCCCCC
Confidence 011111 12345677886 66 455555678899987653210000 00000000
Q ss_pred -------cCCCCCeE-EEEEeec------CCcceEEEEeCCCcEEEEEecCCCceeeEEeccC------C----------
Q 016185 311 -------PVPECDIW-FIKFSCD------FHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA------Q---------- 360 (394)
Q Consensus 311 -------~~~~~~i~-~~~~~~~------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~---------- 360 (394)
...-.... .++..++ ..+.++++-...+.|+.++. .+. +..+... +
T Consensus 321 ~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~---v~~~~g~g~~~~~G~~dG~~~~~~ 396 (430)
T 3tc9_A 321 WVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR---VTTFAGRGSNGTSGYNDGDLRQEA 396 (430)
T ss_dssp CBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE---EEEEEECCTTSSSSCBCEETTTTC
T ss_pred CCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc---EEEEEeCCCCCCCcccCCCchhhc
Confidence 00001122 4444331 22245555556677888873 332 2222110 1
Q ss_pred ccCCeeEEEeccC-CCEEEEeccCCeEEEEEcC
Q 016185 361 SKSPIRQTAMSYD-GSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 361 ~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~ 392 (394)
.-.....++++|+ +.++++-..+..|+.++++
T Consensus 397 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 397 RFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 1135889999995 6666666677889988875
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.16 E-value=1.8e-05 Score=74.42 Aligned_cols=220 Identities=7% Similarity=-0.129 Sum_probs=119.5
Q ss_pred CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC-
Q 016185 107 NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT- 185 (394)
Q Consensus 107 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~- 185 (394)
.+.|+..++...+....+.. ...+..++|.+.++.++++-.. .+.|+.+++..
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~-------------------------~~~I~~~~~~g~ 438 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLS-------------------------QRMICSTQLDRA 438 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTT-------------------------TTSBEEEESCCC
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecC-------------------------CCeEEEEecCCC
Confidence 35677778766554433332 3456788998855556666555 78899998865
Q ss_pred ---CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee
Q 016185 186 ---GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS 262 (394)
Q Consensus 186 ---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (394)
......+. ........|++.+..++++++-...+.|.++++..... ...+.
T Consensus 439 ~~~~~~~~~i~---~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~-----------------------~~l~~ 492 (699)
T 1n7d_A 439 HGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-----------------------KTLFR 492 (699)
T ss_dssp CC-CCCCCBCC---SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE-----------------------EEECC
T ss_pred CCCcceEEEEe---CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCce-----------------------EEEEe
Confidence 12211111 11223456888753566666666778899999876221 11111
Q ss_pred cCCCceEEEEEe--Cc-EEEEeecC-CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCC
Q 016185 263 VHSNYVDCNRWL--GD-FILSKSVD-NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG 338 (394)
Q Consensus 263 ~~~~~i~~~~~~--~~-~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg 338 (394)
........++++ +. ++++-... +.|.++++...... .+. ...-.....|+++|++. .++++-+..+
T Consensus 493 ~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~-------~l~--~~~l~~PnGlavd~~~~-~LY~aD~~~~ 562 (699)
T 1n7d_A 493 EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-------SLV--TENIQWPNGITLDLLSG-RLYWVDSKLH 562 (699)
T ss_dssp CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCC-------EES--CSSCSSCCCEEECTTTC-CEEEEETTTT
T ss_pred CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCee-------EEE--eCCCCCccEEEEeccCC-EEEEEecCCC
Confidence 111223445554 33 33333223 67888877643210 111 11112345789998864 4555556678
Q ss_pred cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 339 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
.|..+++.......+.... .......+|++..+ .++++....+.|..++.
T Consensus 563 ~I~~~d~dG~~~~~~~~~~--~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 563 SISSIDVNGGNRKTILEDE--KRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp EEEEECSSSSCCEEECCCS--SSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred eEEEEccCCCceEEEEecC--CcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 8999998754322222211 12233455666544 44555556678888875
No 289
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.13 E-value=0.0017 Score=54.28 Aligned_cols=243 Identities=10% Similarity=0.052 Sum_probs=117.6
Q ss_pred cceEEEEec-C------CcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC-----CeEEEEEC
Q 016185 48 YFNVFATVG-G------NRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN-----GIIRVIDV 115 (394)
Q Consensus 48 ~~~~las~~-~------d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d-----g~i~vwd~ 115 (394)
++.+++.|+ . +.+.+||+.+.+- ..+.... ..... .++ .. .++. +++.|+.+ ..+.+||+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p--~~r~~-~~~-~~--~~~~-l~v~GG~~~~~~~~~~~~~d~ 85 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW-SFLPSIT--RKRRY-VAS-VS--LHDR-IYVIGGYDGRSRLSSVECLDY 85 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEE-EECCCCS--SCCBS-CEE-EE--ETTE-EEEECCBCSSCBCCCEEEEET
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeE-EeCCCCC--hhhcc-ccE-EE--ECCE-EEEEcCCCCCccCceEEEEEC
Confidence 356777777 2 2388999877653 2332211 11111 112 22 3455 77777754 46889998
Q ss_pred CCCe---eEEE--EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEE
Q 016185 116 SNEK---LHKS--FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICIL 190 (394)
Q Consensus 116 ~~~~---~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 190 (394)
.+.+ -... +.........+.+ ++.+++.|+.. .......+.+||+.+++-..
T Consensus 86 ~~~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~--------------------~~~~~~~~~~~d~~~~~W~~ 142 (301)
T 2vpj_A 86 TADEDGVWYSVAPMNVRRGLAGATTL---GDMIYVSGGFD--------------------GSRRHTSMERYDPNIDQWSM 142 (301)
T ss_dssp TCCTTCCCEEECCCSSCCBSCEEEEE---TTEEEEECCBC--------------------SSCBCCEEEEEETTTTEEEE
T ss_pred CCCCCCeeEECCCCCCCccceeEEEE---CCEEEEEcccC--------------------CCcccceEEEEcCCCCeEEE
Confidence 7765 2221 1111111111222 34566666540 00002468889987766443
Q ss_pred EeeccCCCcccEEEEEecCCCCeeEEeeccC-----CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCC
Q 016185 191 IFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 265 (394)
Q Consensus 191 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (394)
.-... .....- +++.. ++.+++.|+.+ ..+..||+.+..-.. . ..+....
T Consensus 143 ~~~~p-~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~--------~-------------~~~p~~r 197 (301)
T 2vpj_A 143 LGDMQ-TAREGA-GLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN--------V-------------TPMATKR 197 (301)
T ss_dssp EEECS-SCCBSC-EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE--------E-------------CCCSSCC
T ss_pred CCCCC-CCcccc-eEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe--------C-------------CCCCccc
Confidence 32211 111111 22222 56777777765 457888887732111 0 0011111
Q ss_pred CceEEEEEeCcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCC---
Q 016185 266 NYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE--- 337 (394)
Q Consensus 266 ~~i~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d--- 337 (394)
..-.++.+.+.+++.|+.+ ..+.+||+.+.+-. .+...+........ ...++ .+++.|+.+
T Consensus 198 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~-------~~~~~p~~r~~~~~--~~~~~--~i~v~GG~~~~~ 266 (301)
T 2vpj_A 198 SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT-------TVTSMTTPRCYVGA--TVLRG--RLYAIAGYDGNS 266 (301)
T ss_dssp BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE-------EECCCSSCCBSCEE--EEETT--EEEEECCBCSSS
T ss_pred ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEE-------ECCCCCCcccceeE--EEECC--EEEEEcCcCCCc
Confidence 1122333446677777764 46889998876421 12222222212222 22355 577777755
Q ss_pred --CcEEEEEecCCCceeeEEec
Q 016185 338 --GKIFVWELQSSPPVLIARLS 357 (394)
Q Consensus 338 --g~i~iwd~~~~~~~~~~~~~ 357 (394)
..+.+||..+.+...+..++
T Consensus 267 ~~~~v~~yd~~~~~W~~~~~~~ 288 (301)
T 2vpj_A 267 LLSSIECYDPIIDSWEVVTSMG 288 (301)
T ss_dssp BEEEEEEEETTTTEEEEEEEEE
T ss_pred ccccEEEEcCCCCeEEEcCCCC
Confidence 45788888876544444333
No 290
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.13 E-value=0.0026 Score=53.23 Aligned_cols=243 Identities=9% Similarity=0.031 Sum_probs=118.8
Q ss_pred ceEEEEecCC---cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC----CeEEEEECCCCeeE
Q 016185 49 FNVFATVGGN---RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN----GIIRVIDVSNEKLH 121 (394)
Q Consensus 49 ~~~las~~~d---~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~ 121 (394)
+.+++.|+.+ .+.+||..+.+-. .+.... ...... ++ .. .++. +++.|+.+ ..+.+||+.+.+-.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~-~~~~~p--~~r~~~-~~-~~--~~~~-lyv~GG~~~~~~~~~~~~d~~~~~W~ 83 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWT-DIRCPF--EKRRDA-AC-VF--WDNV-VYILGGSQLFPIKRMDCYNVVKDSWY 83 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEE-ECCCCS--CCCBSC-EE-EE--ETTE-EEEECCBSSSBCCEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEe-cCCCCC--ccccee-EE-EE--ECCE-EEEEeCCCCCCcceEEEEeCCCCeEE
Confidence 4566666643 3999998876532 332211 111111 12 22 3465 77777755 67888998876543
Q ss_pred EEEEecC--CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCc
Q 016185 122 KSFVGHG--DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHR 199 (394)
Q Consensus 122 ~~~~~~~--~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 199 (394)
..-.... .....+.+ ++.+++.|+.. ........+.+||..+.+-...-... ...
T Consensus 84 ~~~~~p~~r~~~~~~~~---~~~iyv~GG~~-------------------~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r 140 (306)
T 3ii7_A 84 SKLGPPTPRDSLAACAA---EGKIYTSGGSE-------------------VGNSALYLFECYDTRTESWHTKPSML-TQR 140 (306)
T ss_dssp EEECCSSCCBSCEEEEE---TTEEEEECCBB-------------------TTBSCCCCEEEEETTTTEEEEECCCS-SCC
T ss_pred ECCCCCccccceeEEEE---CCEEEEECCCC-------------------CCCcEeeeEEEEeCCCCceEeCCCCc-CCc
Confidence 2211111 11111222 44566666540 00000246889998877644332211 111
Q ss_pred ccEEEEEecCCCCeeEEeeccC---------CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEE
Q 016185 200 NEVLSVDFHPSDIYRIASCGMD---------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 270 (394)
Q Consensus 200 ~~i~~~~~~~~~~~~l~s~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (394)
..- +++.. ++.+++.|+.+ ..+.+||+.+..-. ..+ .+......-.+
T Consensus 141 ~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~--------~~~-------------~~p~~r~~~~~ 196 (306)
T 3ii7_A 141 CSH-GMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT--------ELC-------------PMIEARKNHGL 196 (306)
T ss_dssp BSC-EEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEE--------EEC-------------CCSSCCBSCEE
T ss_pred cee-EEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEE--------ECC-------------CccchhhcceE
Confidence 111 22222 56777777643 44788888774211 110 01111111122
Q ss_pred EEEeCcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCC-----CcE
Q 016185 271 NRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE-----GKI 340 (394)
Q Consensus 271 ~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-----g~i 340 (394)
+...+.+++.|+.+ ..+.+||+.+.+-. .+..++.......++.+ ++ .+++.|+.+ ..+
T Consensus 197 ~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~~~~~~~~--~~--~i~v~GG~~~~~~~~~~ 265 (306)
T 3ii7_A 197 VFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWK-------MVSPMPWKGVTVKCAAV--GS--IVYVLAGFQGVGRLGHI 265 (306)
T ss_dssp EEETTEEEEECCEETTEEBCCEEEEETTTTEEE-------ECCCCSCCBSCCEEEEE--TT--EEEEEECBCSSSBCCEE
T ss_pred EEECCEEEEEeCCCCCCCCceEEEeeCCCCcEE-------ECCCCCCCccceeEEEE--CC--EEEEEeCcCCCeeeeeE
Confidence 33346677776653 45888998876421 12222222122222222 45 577777744 568
Q ss_pred EEEEecCCCceeeEEec
Q 016185 341 FVWELQSSPPVLIARLS 357 (394)
Q Consensus 341 ~iwd~~~~~~~~~~~~~ 357 (394)
.+||..+.+...+..+.
T Consensus 266 ~~yd~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 266 LEYNTETDKWVANSKVR 282 (306)
T ss_dssp EEEETTTTEEEEEEEEE
T ss_pred EEEcCCCCeEEeCCCcc
Confidence 89999887655555554
No 291
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.12 E-value=0.00087 Score=55.99 Aligned_cols=178 Identities=10% Similarity=0.027 Sum_probs=90.3
Q ss_pred CcEEEEEecCCc---EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCC-----cEEEEEccccceeeccccccCCCCC
Q 016185 176 ESVRLWNVQTGI---CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-----TVKIWSMKEFWTYVEKSFTWTDLPS 247 (394)
Q Consensus 176 ~~i~vwd~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~ 247 (394)
..+.+||+.+++ -...-... .....- +++.. ++.+++.|+.++ .+.+||+.+.+-..
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p-~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~----------- 142 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMN-VRRGLA-GATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM----------- 142 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCS-SCCBSC-EEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEE-----------
T ss_pred ceEEEEECCCCCCCeeEECCCCC-CCccce-eEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEE-----------
Confidence 468899988766 33332211 111111 22222 567777777543 57788877632110
Q ss_pred CCCccccccceeeeecCCCceEEEEEeCcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEE
Q 016185 248 KFPTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKF 322 (394)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 322 (394)
+..+......-.++...+.+++.|+.+ ..+.+||+.+.+-. .+...+........+
T Consensus 143 ----------~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-------~~~~~p~~r~~~~~~-- 203 (301)
T 2vpj_A 143 ----------LGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-------NVTPMATKRSGAGVA-- 203 (301)
T ss_dssp ----------EEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-------EECCCSSCCBSCEEE--
T ss_pred ----------CCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-------eCCCCCcccccceEE--
Confidence 111111111122333346777777654 45888998776421 122222221111222
Q ss_pred eecCCcceEEEEeCC-----CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC-----CeEEEEEcC
Q 016185 323 SCDFHYNAAAIGNRE-----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWDAI 392 (394)
Q Consensus 323 ~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~ 392 (394)
..++ .+++.|+.+ ..+.+||+.+.+...+..++ ........+.+ ++++++.|+.+ ..+.+||++
T Consensus 204 ~~~~--~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 204 LLND--HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT--TPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EETT--EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS--SCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETT
T ss_pred EECC--EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC--CcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCC
Confidence 2244 577777764 46899999887544443333 11112222222 67777888765 357888876
Q ss_pred C
Q 016185 393 P 393 (394)
Q Consensus 393 ~ 393 (394)
+
T Consensus 278 ~ 278 (301)
T 2vpj_A 278 I 278 (301)
T ss_dssp T
T ss_pred C
Confidence 4
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.09 E-value=0.0018 Score=54.36 Aligned_cols=191 Identities=13% Similarity=0.191 Sum_probs=111.4
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCC----e---eEEeec-c--CCcEEEEEccccceeeccccccCC
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDI----Y---RIASCG-M--DNTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~---~l~s~~-~--dg~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
.+-+.+||+ +|+.++.+. . +.++.+..-| +- . ++++.. . +++|.+|++......+...-..
T Consensus 49 ~~gL~Vydl-~G~~l~~~~---~--g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~-- 119 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYN---T--GKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDP-- 119 (355)
T ss_dssp TTEEEEEET-TSCEEEEEC---C--SCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCT--
T ss_pred CCCEEEEcC-CCcEEEEcc---C--CCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecccc--
Confidence 789999999 899888875 2 5566666665 21 1 233333 3 5789999774211000000000
Q ss_pred CCCCCCccccccceeeeecCCCceEEEEE--e---Cc-EEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeE
Q 016185 245 LPSKFPTKYVQFPVFIASVHSNYVDCNRW--L---GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIW 318 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~ 318 (394)
..|+ ..-...+..+++ + +. ++++...+|.+..|++..... .....+.++++... ..+.
T Consensus 120 ----------~~pv---~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~--g~~~~~lVR~f~lg-sq~E 183 (355)
T 3amr_A 120 ----------DHPI---ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKN--GYISGKKVRAFKMN-SQTE 183 (355)
T ss_dssp ----------TSCE---ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTT--SCEEEEEEEEEECS-SCEE
T ss_pred ----------ccCc---CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCC--CcccceEEEEecCC-CCcc
Confidence 0000 000133444444 3 33 688888899999999853211 01133456666654 3677
Q ss_pred EEEEeecCCcceEEEEeCCCcEEEEEecCCC---ceeeEEeccCCccCCeeEEEe--ccCCC-EEEEec-cCCeEEEEEc
Q 016185 319 FIKFSCDFHYNAAAIGNREGKIFVWELQSSP---PVLIARLSHAQSKSPIRQTAM--SYDGS-TILSCC-EDGAIWRWDA 391 (394)
Q Consensus 319 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~v~~~~~--s~~~~-~l~s~~-~dg~i~iwd~ 391 (394)
.+...+.. ..|+.+-++.-|..|+..... ...+..+........+..|++ .++++ +|++++ .+.+..+||.
T Consensus 184 gcvvDd~~--g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 184 GMAADDEY--GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEEETTT--TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred eEEEcCCC--CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 88888776 589999998776666654322 234444432233347888888 45555 555555 6789999998
Q ss_pred C
Q 016185 392 I 392 (394)
Q Consensus 392 ~ 392 (394)
+
T Consensus 262 ~ 262 (355)
T 3amr_A 262 Q 262 (355)
T ss_dssp S
T ss_pred C
Confidence 5
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.07 E-value=0.0032 Score=52.35 Aligned_cols=167 Identities=9% Similarity=0.054 Sum_probs=101.3
Q ss_pred cCccceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCC--ccc--ceEEEEEE-EcCCCCcEEEEe
Q 016185 31 EGKRPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDED--KEE--SFYTVSWA-CNVDGIPFLVAG 104 (394)
Q Consensus 31 ~h~~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~--~~~--~v~~~~~~-~~~~~~~~l~s~ 104 (394)
....--.+++|.+ +++.++++.-.++ |..|+...+..... . +.... ... .+..+.|. .+|+++ ++++.
T Consensus 10 ~~~~yPE~~~wd~---~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~-~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~ 83 (334)
T 2p9w_A 10 VKNLTPEDTIYDR---TRQVFYQSNLYKGRIEVYNPKTQSHFNV-V-IDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVM 83 (334)
T ss_dssp CTTCCCSCEEEET---TTTEEEEEETTTTEEEEECTTTCCEEEE-C-CTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEE
T ss_pred CcccCCcCccCcC---CCCEEEEEeccCCEEEEEcCCCCeEEEE-e-cCCccccCCCcceeeEEEEeccCCCCc-EEEEE
Confidence 3344556788986 2467777765565 99999875543322 1 11100 122 23455550 037777 66643
Q ss_pred e-------------cCCeEEEEECC---CCeeEEEEE--ecC-----------CceeEEEEcCCCCcEEEEceeeeEEee
Q 016185 105 G-------------INGIIRVIDVS---NEKLHKSFV--GHG-----------DSINEIRTQPLKPSLVVSASKVIIISS 155 (394)
Q Consensus 105 ~-------------~dg~i~vwd~~---~~~~~~~~~--~~~-----------~~v~~~~~~~~~~~~l~s~~~~i~~~~ 155 (394)
. .+..|..+|+. +++.+.... ... ....+++..+ +++..++++.
T Consensus 84 ~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~------ 156 (334)
T 2p9w_A 84 KNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFAL------ 156 (334)
T ss_dssp EETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEE------
T ss_pred cccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCC------
Confidence 3 26789999998 777766554 111 2478999999 7788888887
Q ss_pred ccceeeeeeeccceeeeccC-CcEEEEEecCCcEEEEeec-c--CCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccc
Q 016185 156 LSLICLLLFIRSNCLRVGQD-ESVRLWNVQTGICILIFAG-A--GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d-~~i~vwd~~~~~~~~~~~~-~--~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 231 (394)
. +.|...+... +....+.. . .......+.|+++| +++.|++....|.+..+|+..
T Consensus 157 -------------------~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 157 -------------------GMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp -------------------SSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSS
T ss_pred -------------------CCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCC
Confidence 5 5555444432 22222110 0 01223467899999 887777776699999999885
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.07 E-value=0.0071 Score=55.96 Aligned_cols=161 Identities=9% Similarity=-0.040 Sum_probs=95.0
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
.....|+|++. ++.++.+-..++ |..+++........+.. ..-.....+++. +.+..+.++-...+.|.+
T Consensus 40 ~~~~~ld~~~~---~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~----~~~~~P~GlAvD--~~~~~ly~~d~~~~~I~v 110 (619)
T 3s94_A 40 EDAAAVDFVFS---HGLIYWSDVSEEAIKRTEFNKTESVQNVVV----SGLLSPDGLACD--WLGEKLYWTDSETNRIEV 110 (619)
T ss_dssp SCEEEEEEETT---TTEEEEEETTTTEEEEEEC-----CEEEEC----SSCSCEEEEEEE--TTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEEeC---CCEEEEEECCCCeEEEEEccCCCceEEEEe----CCCCCcCeEEEE--ecCCEEEEEeCCCCEEEE
Confidence 45788999982 455555544444 88888765432122211 111345667776 755536666677899999
Q ss_pred EECCCCeeEEEEE-ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE
Q 016185 113 IDVSNEKLHKSFV-GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI 191 (394)
Q Consensus 113 wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 191 (394)
.++... ....+. ..-.....|++.|.++.++++--. ..+.|...++........
T Consensus 111 ~~~dG~-~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g------------------------~~~~I~r~~~dG~~~~~l 165 (619)
T 3s94_A 111 SNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWG------------------------EVPKIERAGMDGSSRFII 165 (619)
T ss_dssp EETTSC-SCEEEECSSCSCCCCEEEETTTTEEEEEECS------------------------SSCEEEEEETTSCSCEEE
T ss_pred EECCCC-CEEEEEeCCCCCCceEEEecCCCeEEEeccC------------------------CCCEEEEEECCCCceEEE
Confidence 998643 333333 344557889999855666665421 035666666643333322
Q ss_pred eeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccc
Q 016185 192 FAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 192 ~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 231 (394)
.. ..-.....|++++.++.++++-...+.|..+|+..
T Consensus 166 ~~---~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG 202 (619)
T 3s94_A 166 IN---SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 202 (619)
T ss_dssp EC---SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC
T ss_pred Ee---CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC
Confidence 22 23456789999984566666666678888888876
No 295
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.03 E-value=0.0029 Score=52.95 Aligned_cols=230 Identities=7% Similarity=-0.003 Sum_probs=113.7
Q ss_pred EEEEeec--CCeEEEEECCCCeeEEE--EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 100 FLVAGGI--NGIIRVIDVSNEKLHKS--FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 100 ~l~s~~~--dg~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
+++.|+. ...+.+||..+.+-... +.........+.+ ++.+++.|+.. ...-
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~---------------------~~~~ 69 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW---DNVVYILGGSQ---------------------LFPI 69 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE---TTEEEEECCBS---------------------SSBC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE---CCEEEEEeCCC---------------------CCCc
Confidence 5566654 35788899887653321 1111111112222 44566666640 0112
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC------CcEEEEEccccceeeccccccCCCCCCC
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSFTWTDLPSKF 249 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~ 249 (394)
..+.+||+.+++-...-... .....-..+. . ++.+++.|+.+ ..+.+||+.+..-. ..+
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~--------~~~--- 134 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPP-TPRDSLAACA-A--EGKIYTSGGSEVGNSALYLFECYDTRTESWH--------TKP--- 134 (306)
T ss_dssp CEEEEEETTTTEEEEEECCS-SCCBSCEEEE-E--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE--------EEC---
T ss_pred ceEEEEeCCCCeEEECCCCC-ccccceeEEE-E--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE--------eCC---
Confidence 57888998877644332211 1111112222 2 56777887765 45888888774311 100
Q ss_pred CccccccceeeeecCCCceEEEEEeCcEEEEeec---------CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEE
Q 016185 250 PTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSV---------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFI 320 (394)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~---------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 320 (394)
.+......-.++...+.+++.|+. -..+.+||+.+.+- ..+...+.....-..+
T Consensus 135 ----------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~ 197 (306)
T 3ii7_A 135 ----------SMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW-------TELCPMIEARKNHGLV 197 (306)
T ss_dssp ----------CCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEE-------EEECCCSSCCBSCEEE
T ss_pred ----------CCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeE-------EECCCccchhhcceEE
Confidence 011111111223334666666654 34588899887631 1122222221111222
Q ss_pred EEeecCCcceEEEEeCC-----CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC-----CeEEEEE
Q 016185 321 KFSCDFHYNAAAIGNRE-----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWD 390 (394)
Q Consensus 321 ~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd 390 (394)
..++ .+++.|+.+ ..+.+||+.+.+...+..++ ........+.+ ++++++.|+.+ ..+.+||
T Consensus 198 --~~~~--~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd 269 (306)
T 3ii7_A 198 --FVKD--KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP--WKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYN 269 (306)
T ss_dssp --EETT--EEEEECCEETTEEBCCEEEEETTTTEEEECCCCS--CCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEE
T ss_pred --EECC--EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC--CCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEc
Confidence 2244 567777653 46889998887544443333 11222223333 66788888754 4688888
Q ss_pred cCC
Q 016185 391 AIP 393 (394)
Q Consensus 391 ~~~ 393 (394)
+.+
T Consensus 270 ~~~ 272 (306)
T 3ii7_A 270 TET 272 (306)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 296
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.02 E-value=0.0015 Score=54.51 Aligned_cols=178 Identities=11% Similarity=0.092 Sum_probs=88.9
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCC-----cEEEEEccccceeeccccccCCCCCCCC
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN-----TVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
..+.+||..+.+-...-... .....- +++.. ++.+++.|+.++ .+.+||+.+..- ...+
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p-~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--------~~~~---- 140 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMR-DRRSTL-GAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEW--------FHVA---- 140 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS-SCCBSC-EEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEE--------EEEC----
T ss_pred cceEEECCCCCceeeCCCCC-ccccce-EEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeE--------eecC----
Confidence 45888998876644332211 111111 22222 567777777653 467777766321 1110
Q ss_pred ccccccceeeeecCCCceEEEEEeCcEEEEeecC-------CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEe
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVD-------NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFS 323 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 323 (394)
.+......-.++.+.+.+++.|+.+ ..+.+||+.+.+-. .+...+........+ .
T Consensus 141 ---------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~~~~~~--~ 202 (302)
T 2xn4_A 141 ---------PMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-------YIAEMSTRRSGAGVG--V 202 (302)
T ss_dssp ---------CCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-------EECCCSSCCBSCEEE--E
T ss_pred ---------CCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-------ECCCCccccccccEE--E
Confidence 0111111122233346666666643 35888998776311 122222221122222 2
Q ss_pred ecCCcceEEEEeCC-----CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCC-----eEEEEEcCC
Q 016185 324 CDFHYNAAAIGNRE-----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG-----AIWRWDAIP 393 (394)
Q Consensus 324 ~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~ 393 (394)
.++ .+++.|+.+ ..+.+||..+.+...+..+.. .......+. -++++++.|+.++ .+.+||+.+
T Consensus 203 ~~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 203 LNN--LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM--CRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp ETT--EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS--CCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred ECC--EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC--ccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 244 577777754 468899998875444333331 111112222 2677888887654 488998764
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.01 E-value=0.0093 Score=55.25 Aligned_cols=229 Identities=6% Similarity=-0.121 Sum_probs=136.4
Q ss_pred eEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCC
Q 016185 50 NVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGD 129 (394)
Q Consensus 50 ~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 129 (394)
.+|+.+....|+..++.+......+.. ..-.....++|. +.+..+.++-..++.|..+++........+.....
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~----~~~~~~~~l~~d--~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPL----TGVKEASALDFD--VTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCC----CSCSCEEEEEEE--TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEc----CCCCceEEEEEE--CCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 355555555699999876554333221 112345566666 76653556666789999999865443333332234
Q ss_pred ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecC
Q 016185 130 SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP 209 (394)
Q Consensus 130 ~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 209 (394)
....+++.+.+++++++-.. .+.|.+.++........+. ..-.....|+++|
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~-------------------------~~~I~v~~~dG~~~~~l~~---~~l~~P~~iavdp 132 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTG-------------------------TNRIEVSKLDGQHRQVLVW---KDLDSPRALALDP 132 (628)
T ss_dssp CCCEEEEETTTTEEEEEETT-------------------------TTEEEEEETTSTTCEEEEC---SSCCCEEEEEEET
T ss_pred CcceEEEEeCCCEEEEEECC-------------------------CCEEEEEecCCCcEEEEEe---CCCCCcccEEEcc
Confidence 56788888756677777666 7889999986544333332 2345578999998
Q ss_pred CCCeeEEee-ccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEeecCC
Q 016185 210 SDIYRIASC-GMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDN 285 (394)
Q Consensus 210 ~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~dg 285 (394)
..+.++++- +..+.|...++.... ...+...-.....++++ ++ +.++-...+
T Consensus 133 ~~G~lY~tD~g~~~~I~r~~~dG~~------------------------~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~ 188 (628)
T 4a0p_A 133 AEGFMYWTEWGGKPKIDRAAMDGSE------------------------RTTLVPNVGRANGLTIDYAKRRLYWTDLDTN 188 (628)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSCS------------------------CEEEECSCSSEEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEEeCCCCCCEEEEEeCCCCc------------------------eEEEECCCCCcceEEEccccCEEEEEECCCC
Confidence 556655554 225677777766521 11111233456778887 34 445555678
Q ss_pred eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 286 EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 286 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
.|..+|+..... +.+.. .......+++.. + .++++-...+.|...|..+++
T Consensus 189 ~I~~~d~dG~~~-------~v~~~---~l~~P~glav~~-~--~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 189 LIESSNMLGLNR-------EVIAD---DLPHPFGLTQYQ-D--YIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEEETTSCSC-------EEEEE---CCSCEEEEEEET-T--EEEEEETTTTEEEEEETTTCC
T ss_pred EEEEEcCCCCce-------EEeec---cCCCceEEEEEC-C--EEEEecCCCCEEEEEECCCCC
Confidence 899999876432 11111 122345677654 3 456666667888888876654
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.00 E-value=0.0046 Score=51.92 Aligned_cols=197 Identities=10% Similarity=0.162 Sum_probs=113.5
Q ss_pred EEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEc--CCCCc--EEEEee-c--CCeEEEE
Q 016185 41 FNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACN--VDGIP--FLVAGG-I--NGIIRVI 113 (394)
Q Consensus 41 ~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~--~l~s~~-~--dg~i~vw 113 (394)
.+|.+...+.+|++.-.+++.+||+ +|+.++.+.. +.++.+.+.+. -.|+. ++++.. . +++|.+|
T Consensus 33 ~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf 104 (355)
T 3amr_A 33 LDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT-------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIY 104 (355)
T ss_dssp CCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC-------SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEE
T ss_pred cCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC-------CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEE
Confidence 3453333344555555555999998 8888877751 34555555521 12321 223333 3 5799999
Q ss_pred ECC-CCeeEEEEEe------cC-CceeEEEE--cCCCCc-EEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEE
Q 016185 114 DVS-NEKLHKSFVG------HG-DSINEIRT--QPLKPS-LVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWN 182 (394)
Q Consensus 114 d~~-~~~~~~~~~~------~~-~~v~~~~~--~~~~~~-~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd 182 (394)
++. ....+..+.. .. ..+..+++ +|..+. +++...+ +|.+..|+
T Consensus 105 ~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-------------------------~G~~~q~~ 159 (355)
T 3amr_A 105 AIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-------------------------EGEFEQYE 159 (355)
T ss_dssp EECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-------------------------SSEEEEEE
T ss_pred EECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-------------------------CCeEEEEE
Confidence 773 2223444411 11 45667777 664443 5666666 89999999
Q ss_pred ec-------CCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccc
Q 016185 183 VQ-------TGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQ 255 (394)
Q Consensus 183 ~~-------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (394)
+. +.+.++.+. ....+..+..++ ....|+.+-.+.-|..++.+.... ...
T Consensus 160 l~~~~~g~~~~~lVR~f~----lgsq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~------------------~~~ 216 (355)
T 3amr_A 160 LKADKNGYISGKKVRAFK----MNSQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGG------------------SNG 216 (355)
T ss_dssp EEECTTSCEEEEEEEEEE----CSSCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSC------------------SCC
T ss_pred EEeCCCCcccceEEEEec----CCCCcceEEEcC-CCCeEEEecccceEEEEeCCcCCC------------------CCc
Confidence 83 345677776 456788889988 666788888876666666442100 001
Q ss_pred cceeeee-cC-CCceEEEEEe----Cc-EEEEee-cCCeEEEecCC
Q 016185 256 FPVFIAS-VH-SNYVDCNRWL----GD-FILSKS-VDNEIVLWEPK 293 (394)
Q Consensus 256 ~~~~~~~-~~-~~~i~~~~~~----~~-~l~~~~-~dg~i~~~d~~ 293 (394)
..+.... .+ ...+..|+.. ++ ++++++ .+.++.+||.+
T Consensus 217 ~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 217 TVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 1122221 11 1356777763 23 555555 67899999996
No 299
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.99 E-value=0.0045 Score=51.07 Aligned_cols=260 Identities=10% Similarity=0.089 Sum_probs=148.9
Q ss_pred EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCC
Q 016185 60 VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPL 139 (394)
Q Consensus 60 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 139 (394)
|.|.|+..+..+..-.. ..+. .- .+|..+ .+|.-. ...+.|+|+++.+.++.+.- ...|.--.|-.
T Consensus 51 VvIiDl~n~~~~~Rrpi----~Ads----AI--MnP~~~-ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis- 116 (365)
T 2xzh_A 51 VVIIDMNDPSNPIRRPI----SADS----AI--MNPASK-VIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS- 116 (365)
T ss_dssp EEEEETTSTTSCEEEEC----CCSE----EE--ECSSSS-EEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECS-
T ss_pred EEEEECCCCCCcccccc----ccce----ee--eCCCcc-EEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecC-
Confidence 88999887665322211 0111 11 347777 665554 78899999999988888874 45788888875
Q ss_pred CCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC-CcEEEEeeccC-CCcccEEEEEecCCCCeeEEe
Q 016185 140 KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT-GICILIFAGAG-GHRNEVLSVDFHPSDIYRIAS 217 (394)
Q Consensus 140 ~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s 217 (394)
.+.|+-.. +..|+.|+++. ..+.+.+.... -....|..-..++ +.++++.
T Consensus 117 -~~~L~lVT--------------------------~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l 168 (365)
T 2xzh_A 117 -LNTVALVT--------------------------DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLL 168 (365)
T ss_dssp -SSEEEEEE--------------------------SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECT-TSCEEEE
T ss_pred -CCeEEEEc--------------------------CCcEEEEcccCCCCCceeeecchhcccceEEEEEECC-CCCEEEE
Confidence 34444444 56799999874 34555555210 0134677777787 7676655
Q ss_pred ec-------cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCc-----EEEEeec--
Q 016185 218 CG-------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGD-----FILSKSV-- 283 (394)
Q Consensus 218 ~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~l~~~~~-- 283 (394)
.+ -.|.+.+|..+... -..+++|...-..+...|+ .+..+..
T Consensus 169 ~GI~~~~~~v~G~mQLYS~er~~------------------------sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 169 TGISAQQNRVVGAMQLYSVDRKV------------------------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp EEEEEETTEEEEEEEEEETTTTE------------------------EEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred EeEeccCCccceeEEEEeecccc------------------------cceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 43 24788888887732 3345555544433333322 2222222
Q ss_pred -CCeEEEecCCCC-CCCCC--CCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccC
Q 016185 284 -DNEIVLWEPKMK-EQSPG--EGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA 359 (394)
Q Consensus 284 -dg~i~~~d~~~~-~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 359 (394)
.+++++-++... ...+. ....+..........--.++..++.. ..+..-+.-|.|++||+.++......++.
T Consensus 225 ~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ky--gviyviTK~G~ihlyDleTgt~i~~nrIS-- 300 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETGTCIYMNRIS-- 300 (365)
T ss_dssp TEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTT--TEEEEEETTSEEEEEETTTCCEEEEEECC--
T ss_pred CCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccC--CEEEEEeCCcEEEEEEcccCcEEEEeccC--
Confidence 368999888543 11110 00111111111112223456666655 68888899999999999999654444444
Q ss_pred CccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 360 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
...|-.-+-+....=++.....|.|.--.+
T Consensus 301 --~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 301 --GETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp --SSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred --CCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 245554454444344444457776654443
No 300
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.97 E-value=0.006 Score=51.57 Aligned_cols=198 Identities=6% Similarity=-0.044 Sum_probs=105.5
Q ss_pred CccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEE
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIR 111 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~ 111 (394)
+...++.+.+.+ ++.+++.+..+.|.. ....|+....+.. .....+..+.+. +++. +++.+...+..+
T Consensus 120 ~~~~~~~i~~~~----~~~~~~~~~~g~v~~-S~DgG~tW~~~~~----~~~~~~~~~~~~--~~~~-~~~~g~~G~~~~ 187 (327)
T 2xbg_A 120 LPGSPRLIKALG----NGSAEMITNVGAIYR-TKDSGKNWQALVQ----EAIGVMRNLNRS--PSGE-YVAVSSRGSFYS 187 (327)
T ss_dssp CSSCEEEEEEEE----TTEEEEEETTCCEEE-ESSTTSSEEEEEC----SCCCCEEEEEEC--TTSC-EEEEETTSSEEE
T ss_pred CCCCeEEEEEEC----CCCEEEEeCCccEEE-EcCCCCCCEEeec----CCCcceEEEEEc--CCCc-EEEEECCCcEEE
Confidence 345678888876 577777775443322 2234544444432 234467777665 7887 666665444444
Q ss_pred EEECCCCeeEEEE-EecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEE
Q 016185 112 VIDVSNEKLHKSF-VGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICIL 190 (394)
Q Consensus 112 vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 190 (394)
-+|- .++.-..+ ......+..+.+.+ ++.+++.+ . +|.+.+.+.+.++.-.
T Consensus 188 S~d~-gG~tW~~~~~~~~~~~~~~~~~~-~g~~~~~~-~-------------------------~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 188 TWEP-GQTAWEPHNRTTSRRLHNMGFTP-DGRLWMIV-N-------------------------GGKIAFSDPDNSENWG 239 (327)
T ss_dssp EECT-TCSSCEEEECCSSSCEEEEEECT-TSCEEEEE-T-------------------------TTEEEEEETTEEEEEC
T ss_pred EeCC-CCCceeECCCCCCCccceeEECC-CCCEEEEe-C-------------------------CceEEEecCCCCCeeE
Confidence 4442 12222222 23455788888888 55555444 4 7777766433233322
Q ss_pred Eeecc-CCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceE
Q 016185 191 IFAGA-GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 269 (394)
Q Consensus 191 ~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 269 (394)
.+... ......+.++.+.+ ++.+++++. +|.+ ++....++. |. .+......+..+.
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i-~~S~DgG~t-------W~-------------~~~~~~~~~~~~~ 296 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL-LCSQDGGQT-------WQ-------------QDVDVKKVPSNFY 296 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE-EEESSTTSS-------CE-------------ECGGGTTSSSCCC
T ss_pred eccCCcccCCcceEEEEecC-CCEEEEEeC-CCeE-EEeCCCCcc-------cE-------------EcCccCCCCCCeE
Confidence 22210 01234588999987 776655554 6666 333333221 00 0000011234566
Q ss_pred EEEEe-CcEEEEeecCCeEEEecC
Q 016185 270 CNRWL-GDFILSKSVDNEIVLWEP 292 (394)
Q Consensus 270 ~~~~~-~~~l~~~~~dg~i~~~d~ 292 (394)
++.|. +..+++++.+|.|.-++-
T Consensus 297 ~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 297 KILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEEETTEEEEECSTTEEEEECC
T ss_pred EEEEECCCceEEEcCCceEEEEcC
Confidence 77774 666777788998887764
No 301
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.95 E-value=0.0087 Score=52.75 Aligned_cols=245 Identities=8% Similarity=-0.009 Sum_probs=130.3
Q ss_pred EEEEEEEcCC--CCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeee
Q 016185 87 YTVSWACNVD--GIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLF 164 (394)
Q Consensus 87 ~~~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~ 164 (394)
..++|. |+ +. .|+.+...+.|+.+|..+++.... .........+++++ +++++++....
T Consensus 142 ~gvavd--~~s~~g-~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~-dG~lyVad~~~-------------- 202 (433)
T 4hw6_A 142 WRMMFD--PNSNYD-DLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTL-NGDMVVVDDQS-------------- 202 (433)
T ss_dssp CEEEEC--TTTTTC-EEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECT-TCCEEEEECCS--------------
T ss_pred ceEEEc--cccCCC-EEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECC-CCCEEEEcCCC--------------
Confidence 456665 74 23 455554448999999877765443 33445678999999 55565554420
Q ss_pred eccceeeeccCCc-EEEEEecCCcE-EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeecccccc
Q 016185 165 IRSNCLRVGQDES-VRLWNVQTGIC-ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 165 ~~~~~~~~~~d~~-i~vwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
..+.. +...+...+.. ...+. .......++++|.++.++++-..++.|+.+|..++...
T Consensus 203 --------~~~~~gv~~~~~~~~~~~~~~~~----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~------- 263 (433)
T 4hw6_A 203 --------SDTNTGIYLFTRASGFTERLSLC----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT------- 263 (433)
T ss_dssp --------CTTSEEEEEECGGGTTCCEEEEE----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-------
T ss_pred --------CcccceEEEEECCCCeecccccc----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-------
Confidence 00111 22222222111 11111 12334668888855666666667788999998753210
Q ss_pred CCCCCCCCccccccceeeeecCCCceEEEEEe--Cc-EEEEeecCCeEEEecCCC--CCCCCCCCcceeccc--------
Q 016185 243 TDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GD-FILSKSVDNEIVLWEPKM--KEQSPGEGTADILQK-------- 309 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~dg~i~~~d~~~--~~~~~~~~~~~~~~~-------- 309 (394)
..+... .....-..++++ ++ +.++-...+.|..++... +..... ......
T Consensus 264 -------------~~~~~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~---~~~ag~~g~~g~~d 326 (433)
T 4hw6_A 264 -------------EEEVMM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVP---YIVCGQHSSPGWVD 326 (433)
T ss_dssp -------------EEEEEC-SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCC---EEEEECTTCCCCBC
T ss_pred -------------EEEecc-CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcE---EEEEecCCCCccCC
Confidence 001010 111122357776 66 455555678899977653 211000 000000
Q ss_pred ---ccCCCCCeEEEEE---------eecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccCC----------------c
Q 016185 310 ---YPVPECDIWFIKF---------SCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQ----------------S 361 (394)
Q Consensus 310 ---~~~~~~~i~~~~~---------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------~ 361 (394)
....-.....+++ .+++ .++++-...+.|+.++. ++ .+..+...+ .
T Consensus 327 g~~~~a~~~~P~giav~~n~~y~~dd~~g--~lyvaD~~n~~I~~~~~-~G---~v~t~~G~g~~~~~G~~dG~~~~~~~ 400 (433)
T 4hw6_A 327 GMGTGARLWGPNQGIFVKNEAYAGEEDEY--DFYFCDRDSHTVRVLTP-EG---RVTTYAGRGNSREWGYVDGELRSQAL 400 (433)
T ss_dssp EEGGGSBCSSEEEEEEEECGGGTTSSCCE--EEEEEETTTTEEEEECT-TS---EEEEEECCCTTCSSCCBCEETTTTCB
T ss_pred CcccceEEcCCccEEEEccccccccCCCC--cEEEEECCCCEEEEECC-CC---CEEEEEeCCCCCccccCCCccccccE
Confidence 0001123567888 4555 56666666788888874 33 122222100 1
Q ss_pred cCCeeEEEec-cCCCEEEEeccCCeEEEEEcC
Q 016185 362 KSPIRQTAMS-YDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 362 ~~~v~~~~~s-~~~~~l~s~~~dg~i~iwd~~ 392 (394)
-.....|+++ +++.++++=..++.|+..+++
T Consensus 401 ~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 401 FNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 2347889999 667766666678899998875
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.94 E-value=0.012 Score=54.39 Aligned_cols=228 Identities=8% Similarity=-0.009 Sum_probs=124.0
Q ss_pred EEEEecCCcEEEEEcCCCc--eeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCee-EEEEEec
Q 016185 51 VFATVGGNRVTVYQCLEGG--VIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKL-HKSFVGH 127 (394)
Q Consensus 51 ~las~~~d~i~vw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~ 127 (394)
+|.-+....|+..++.... ...... .-.....+++. +.+..+.++-...+.|..+++..... ...+...
T Consensus 11 ~~~~~~~~~I~~i~~~~~~~~~~~~~~------~~~~~~~ld~~--~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~ 82 (619)
T 3s94_A 11 LLLYANRRDLRLVDATNGKENATIVVG------GLEDAAAVDFV--FSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSG 82 (619)
T ss_dssp CEEEECSSBEEEECCC---------CB------CCSCEEEEEEE--TTTTEEEEEETTTTEEEEEEC-----CEEEECSS
T ss_pred eEEEeccccEEEEeCCCCcceEEEEEc------CCCceEEEEEE--eCCCEEEEEECCCCeEEEEEccCCCceEEEEeCC
Confidence 4555555668888876543 111111 12234556666 76653555555678899999865432 2233333
Q ss_pred CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEe
Q 016185 128 GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDF 207 (394)
Q Consensus 128 ~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~ 207 (394)
......+++.+.+++++++-.. .+.|.+.++........+. ..-.....|++
T Consensus 83 ~~~P~GlAvD~~~~~ly~~d~~-------------------------~~~I~v~~~dG~~~~~l~~---~~l~~P~~Iav 134 (619)
T 3s94_A 83 LLSPDGLACDWLGEKLYWTDSE-------------------------TNRIEVSNLDGSLRKVLFW---QELDQPRAIAL 134 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETT-------------------------TTEEEEEETTSCSCEEEEC---SSCSCCCCEEE
T ss_pred CCCcCeEEEEecCCEEEEEeCC-------------------------CCEEEEEECCCCCEEEEEe---CCCCCCceEEE
Confidence 3567899999866667777666 8899999986544333332 23455678999
Q ss_pred cCCCCeeEEeec-cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe---CcEEEEeec
Q 016185 208 HPSDIYRIASCG-MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL---GDFILSKSV 283 (394)
Q Consensus 208 ~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~ 283 (394)
+|.++.++++-- ..+.|...++.... ........-.....++++ +.+.++-..
T Consensus 135 dp~~g~ly~tD~g~~~~I~r~~~dG~~-----------------------~~~l~~~~~~~P~Glald~~~~~LY~aD~~ 191 (619)
T 3s94_A 135 DPSSGFMYWTDWGEVPKIERAGMDGSS-----------------------RFIIINSEIYWPNGLTLDYEEQKLYWADAK 191 (619)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCS-----------------------CEEEECSSCSSEEEEEEETTTTEEEEEETT
T ss_pred ecCCCeEEEeccCCCCEEEEEECCCCc-----------------------eEEEEeCCCCCCcEEEEEccCCEEEEEeCC
Confidence 984466555542 24566666665411 111111223446677777 334455556
Q ss_pred CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC
Q 016185 284 DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP 349 (394)
Q Consensus 284 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 349 (394)
.+.|..+|+....... ... ........+++..+ .++++-...+.|...|..+++
T Consensus 192 ~~~I~~~~~dG~~~~~------~~~---~~~~~P~gi~~~~~---~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 192 LNFIHKSNLDGTNRQA------VVK---GSLPHPFALTLFED---ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp TCCEEEESSSCCEEC------------------CCCEEESSS---EEEEECTTTCSEEEEESSSCC
T ss_pred CCeEEEecCCCCccEE------EEe---CCCCCceEEEEeCC---EEEEecCCCCEEEEEECCCCc
Confidence 7789999987543211 111 00111234555433 355566667888888887653
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.90 E-value=0.0079 Score=50.84 Aligned_cols=279 Identities=9% Similarity=0.002 Sum_probs=137.1
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
...+.+|.|.+ .+..++++. .+..+.....|+....+.... ......+..+.+. + +. .++ ++..+.|..
T Consensus 35 ~~~~~~v~~~~----~~~~~~~G~-~g~i~~s~DgG~tW~~~~~~~-~~~~~~~~~i~~~--~-~~-~~~-~g~~g~i~~ 103 (327)
T 2xbg_A 35 TATILDMSFID----RHHGWLVGV-NATLMETRDGGQTWEPRTLVL-DHSDYRFNSVSFQ--G-NE-GWI-VGEPPIMLH 103 (327)
T ss_dssp SSCEEEEEESS----SSCEEEEET-TTEEEEESSTTSSCEECCCCC-SCCCCEEEEEEEE--T-TE-EEE-EEETTEEEE
T ss_pred CCcEEEEEECC----CCcEEEEcC-CCeEEEeCCCCCCCeECCCCC-CCCCccEEEEEec--C-Ce-EEE-EECCCeEEE
Confidence 45799999875 456777554 443344434454333332110 1123457777764 5 43 344 455665543
Q ss_pred EECCCCeeEEEEE---ecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEE
Q 016185 113 IDVSNEKLHKSFV---GHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICI 189 (394)
Q Consensus 113 wd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~ 189 (394)
..+.++.-..+. .+...+..+.+.+ ++.+++.+. ++.|.. ..+.|+.-
T Consensus 104 -S~DgG~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~--------------------------~g~v~~-S~DgG~tW 154 (327)
T 2xbg_A 104 -TTDGGQSWSQIPLDPKLPGSPRLIKALG-NGSAEMITN--------------------------VGAIYR-TKDSGKNW 154 (327)
T ss_dssp -ESSTTSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEET--------------------------TCCEEE-ESSTTSSE
T ss_pred -ECCCCCCceECccccCCCCCeEEEEEEC-CCCEEEEeC--------------------------CccEEE-EcCCCCCC
Confidence 222233222222 1223456676655 445554443 554422 12234333
Q ss_pred EEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceE
Q 016185 190 LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVD 269 (394)
Q Consensus 190 ~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 269 (394)
..... .....+..+++.+ ++.+++.+...+..+-.|-.. .. -.++ .......+.
T Consensus 155 ~~~~~--~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG-~t--------------------W~~~--~~~~~~~~~ 208 (327)
T 2xbg_A 155 QALVQ--EAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQ-TA--------------------WEPH--NRTTSRRLH 208 (327)
T ss_dssp EEEEC--SCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTC-SS--------------------CEEE--ECCSSSCEE
T ss_pred EEeec--CCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCC-Cc--------------------eeEC--CCCCCCccc
Confidence 32221 3556789999998 777776665433333333211 00 0011 112344566
Q ss_pred EEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccc-cCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecC
Q 016185 270 CNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKY-PVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 270 ~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
.+.+. ...++.++.+|.+++.+...++. -..+..- ......+..+.+.+++ .+++++ .+|.| ++..+.
T Consensus 209 ~~~~~~~g~~~~~~~~G~~~~s~~D~G~t------W~~~~~~~~~~~~~~~~v~~~~~~--~~~~~g-~~g~i-~~S~Dg 278 (327)
T 2xbg_A 209 NMGFTPDGRLWMIVNGGKIAFSDPDNSEN------WGELLSPLRRNSVGFLDLAYRTPN--EVWLAG-GAGAL-LCSQDG 278 (327)
T ss_dssp EEEECTTSCEEEEETTTEEEEEETTEEEE------ECCCBCTTSSCCSCEEEEEESSSS--CEEEEE-STTCE-EEESST
T ss_pred eeEECCCCCEEEEeCCceEEEecCCCCCe------eEeccCCcccCCcceEEEEecCCC--EEEEEe-CCCeE-EEeCCC
Confidence 67765 33445556678877764222220 0011100 0112357888888766 455544 46766 344443
Q ss_pred CCceeeEEec-cCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 348 SPPVLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 348 ~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
++ .-..+. .......+.++.|.+++. ++.++.+|.|.-++
T Consensus 279 G~--tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 279 GQ--TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp TS--SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred Cc--ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 42 222222 112235678888876554 55666789877665
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.89 E-value=0.0076 Score=50.23 Aligned_cols=230 Identities=12% Similarity=0.079 Sum_probs=111.9
Q ss_pred ceEEEEecCC-----cEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecC-----CeEEEEECCCC
Q 016185 49 FNVFATVGGN-----RVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGIN-----GIIRVIDVSNE 118 (394)
Q Consensus 49 ~~~las~~~d-----~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~ 118 (394)
+.+++.|+.+ .+..||+.+.+- ..+..... .... .++ .. .++. +++.|+.+ ..+.+||..+.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~--~r~~-~~~-~~--~~~~-lyv~GG~~~~~~~~~~~~~d~~~~ 87 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERW-HQVAELPS--RRCR-AGM-VY--MAGL-VFAVGGFNGSLRVRTVDSYDPVKD 87 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEE-EEECCCSS--CCBS-CEE-EE--ETTE-EEEESCBCSSSBCCCEEEEETTTT
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcE-eEcccCCc--cccc-ceE-EE--ECCE-EEEEeCcCCCccccceEEECCCCC
Confidence 4566666642 388999887653 33322111 1111 112 22 2455 77777754 35888898776
Q ss_pred eeEEEEEecCC-ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccC-----CcEEEEEecCCcEEEEe
Q 016185 119 KLHKSFVGHGD-SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD-----ESVRLWNVQTGICILIF 192 (394)
Q Consensus 119 ~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d-----~~i~vwd~~~~~~~~~~ 192 (394)
+-...-..... .-.+++.. ++.+++.|+. + ..+.+||+.+.+-...-
T Consensus 88 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~-------------------------~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 88 QWTSVANMRDRRSTLGAAVL--NGLLYAVGGF-------------------------DGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEEEEE-------------------------CSSCEEEEEEEEETTTTEEEEEC
T ss_pred ceeeCCCCCccccceEEEEE--CCEEEEEcCC-------------------------CCCccCceEEEEeCCCCeEeecC
Confidence 53221110100 01112221 3456666654 3 35778888776644332
Q ss_pred eccCCCcccEEEEEecCCCCeeEEeeccC-------CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCC
Q 016185 193 AGAGGHRNEVLSVDFHPSDIYRIASCGMD-------NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS 265 (394)
Q Consensus 193 ~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (394)
... ..... .+++.. ++.+++.|+.+ ..+..||+.+..-.. . ..+....
T Consensus 141 ~~p-~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~--------~-------------~~~p~~r 195 (302)
T 2xn4_A 141 PMN-TRRSS-VGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTY--------I-------------AEMSTRR 195 (302)
T ss_dssp CCS-SCCBS-CEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEE--------E-------------CCCSSCC
T ss_pred CCC-CcccC-ceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE--------C-------------CCCcccc
Confidence 211 11111 122222 56777777653 347888887732111 0 0011111
Q ss_pred CceEEEEEeCcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCC--
Q 016185 266 NYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREG-- 338 (394)
Q Consensus 266 ~~i~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg-- 338 (394)
..-.++.+.+.+++.|+.+ ..+.+||+.+.+-. .+...+....... +...++ .+++.|+.++
T Consensus 196 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-------~~~~~~~~r~~~~--~~~~~~--~i~v~GG~~~~~ 264 (302)
T 2xn4_A 196 SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR-------QVADMNMCRRNAG--VCAVNG--LLYVVGGDDGSC 264 (302)
T ss_dssp BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEE-------EECCCSSCCBSCE--EEEETT--EEEEECCBCSSS
T ss_pred ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEe-------eCCCCCCccccCe--EEEECC--EEEEECCcCCCc
Confidence 1122333447777777764 36889998876321 1222221111111 222355 5777777553
Q ss_pred ---cEEEEEecCCC
Q 016185 339 ---KIFVWELQSSP 349 (394)
Q Consensus 339 ---~i~iwd~~~~~ 349 (394)
.+.+||..+.+
T Consensus 265 ~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 265 NLASVEYYNPTTDK 278 (302)
T ss_dssp BCCCEEEEETTTTE
T ss_pred ccccEEEEcCCCCe
Confidence 48899988774
No 305
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.89 E-value=0.0054 Score=51.32 Aligned_cols=178 Identities=12% Similarity=0.028 Sum_probs=89.2
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC-----CcEEEEEccccceeeccccccCCCCCCCC
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
..+.+||+.+.+-...-... .....-..+.+ ++.+++.|+.+ ..+.+||+.+.+- ...+.
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--------~~~~~--- 154 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMS-VPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEW--------HLVAP--- 154 (308)
T ss_dssp CCEEEEETTTTEEEECCCCS-SCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTEE--------EECCC---
T ss_pred ceEEEECCCCCeEeECCCCC-cCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCeE--------eECCC---
Confidence 46888998776543322111 11111222222 56777777754 3577888776321 11110
Q ss_pred ccccccceeeeecCCCceEEEEEeCcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeec
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD 325 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (394)
+......-.++.+.+.+++.|+.+ ..+.+||+.+.+-. .+...+........+.+ +
T Consensus 155 ----------~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~~~~~~~~--~ 215 (308)
T 1zgk_A 155 ----------MLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-------MITAMNTIRSGAGVCVL--H 215 (308)
T ss_dssp ----------CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-------ECCCCSSCCBSCEEEEE--T
T ss_pred ----------CCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-------eCCCCCCccccceEEEE--C
Confidence 011111112233346677777654 45888998766421 11222222222222222 4
Q ss_pred CCcceEEEEeCC-----CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC-----CeEEEEEcCC
Q 016185 326 FHYNAAAIGNRE-----GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED-----GAIWRWDAIP 393 (394)
Q Consensus 326 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~ 393 (394)
+ .+++.|+.+ ..+.+||+.+.+...+..++ ........+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 216 ~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 216 N--CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMK--HRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp T--EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCS--SCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred C--EEEEEeCCCCCCccceEEEEeCCCCcEEECCCCC--CCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCC
Confidence 4 577777654 56899999887544333333 11112222222 66777888754 4588888764
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.82 E-value=0.012 Score=50.58 Aligned_cols=260 Identities=10% Similarity=0.072 Sum_probs=151.6
Q ss_pred EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCC
Q 016185 60 VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPL 139 (394)
Q Consensus 60 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 139 (394)
|.|-|+..+..+..-.. .+=+--.+|..+ .+|.=. ...+.|+|+++.+.++.+.- ...|..-.|-.
T Consensus 50 vvIiDl~~~~~~~rrpi----------~AdsAIMnP~~~-iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis- 115 (494)
T 1bpo_A 50 VVIIDMNDPSNPIRRPI----------SADSAIMNPASK-VIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS- 115 (494)
T ss_dssp EEEEETTSTTSCEEEEC----------CCSEEEECSSSS-CEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEE-
T ss_pred EEEEECCCCCcceeccc----------ccceeeeCCCCc-EEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecC-
Confidence 88999887665422211 011112347776 555544 78999999999988888874 45677888875
Q ss_pred CCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecC-CcEEEEeeccC-CCcccEEEEEecCCCCeeEEe
Q 016185 140 KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQT-GICILIFAGAG-GHRNEVLSVDFHPSDIYRIAS 217 (394)
Q Consensus 140 ~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s 217 (394)
.+.|+-.+ +..|+-|++.. ..+.+.+.... -....|..-..++ +.++++.
T Consensus 116 -~~~l~lVT--------------------------~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l 167 (494)
T 1bpo_A 116 -LNTVALVT--------------------------DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-KQKWLLL 167 (494)
T ss_dssp -TTEEEEEC--------------------------SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECT-TSSEEEE
T ss_pred -CCeEEEEc--------------------------CCeeEEecccCCCCchhheecchhcccceEEEEEECC-CCCeEEE
Confidence 24444444 56799999864 34555555210 0134677777788 7776664
Q ss_pred ec-------cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCc-----EEEEeec--
Q 016185 218 CG-------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGD-----FILSKSV-- 283 (394)
Q Consensus 218 ~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~l~~~~~-- 283 (394)
.+ -.|.+.+|..+... -..+++|...-..+...|+ .+..+..
T Consensus 168 ~GI~~~~~~v~G~mQLYS~er~~------------------------sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 168 TGISAQQNRVVGAMQLYSVDRKV------------------------SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp EEEEEETTEEEEEEEEEESTTCC------------------------EEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred EeecccCCcccceEEEeeccccc------------------------cchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 43 35788899888732 3455666655555544422 3333332
Q ss_pred -CCeEEEecCCCC-CCCCCC--CcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEEeccC
Q 016185 284 -DNEIVLWEPKMK-EQSPGE--GTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIARLSHA 359 (394)
Q Consensus 284 -dg~i~~~d~~~~-~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 359 (394)
.+++++-++... ...+.. ...+..........--.++..++.. ..+..-+.-|.|++||+.++......++.
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky--gviyviTK~G~i~lyDleTgt~i~~nrIs-- 299 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETGTCIYMNRIS-- 299 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT--TEEEEEETTSEEEEEETTTCCEEEEEECC--
T ss_pred CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC--CEEEEEecCceEEEEecccceeeeeeccc--
Confidence 378999988643 111100 0001101111112223456666665 68888999999999999999654444444
Q ss_pred CccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 360 QSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 360 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
...|-.-+-+....=++.....|.|.--.+
T Consensus 300 --~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 300 --GETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp --SSCEEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred --CCceEEecccCCCCcEEEEccCceEEEEEE
Confidence 245554454444444555557776654443
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.76 E-value=0.012 Score=49.32 Aligned_cols=243 Identities=9% Similarity=0.061 Sum_probs=116.2
Q ss_pred cceEEEEecC-----CcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec----C-----CeEEEE
Q 016185 48 YFNVFATVGG-----NRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI----N-----GIIRVI 113 (394)
Q Consensus 48 ~~~~las~~~-----d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~----d-----g~i~vw 113 (394)
++.+++.|+. +.+.+||+.+.+- ..+..... .... .+++ . .++. +++.|+. + ..+.+|
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~--~r~~-~~~~-~--~~~~-lyv~GG~~~~~~~~~~~~~~~~~ 95 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-LRLADLQV--PRSG-LAGC-V--VGGL-LYAVGGRNNSPDGNTDSSALDCY 95 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEE-EECCCCSS--CCBS-CEEE-E--ETTE-EEEECCEEEETTEEEECCCEEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeE-eECCCCCc--cccc-ceEE-E--ECCE-EEEECCCcCCCCCCeecceEEEE
Confidence 3567777763 2389999877653 23322111 1111 1122 2 3455 6777765 2 457888
Q ss_pred ECCCCeeEEE--EEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEE
Q 016185 114 DVSNEKLHKS--FVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILI 191 (394)
Q Consensus 114 d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~ 191 (394)
|+.+.+-... +.........+.+ ++.+++.|+.. . ...-..+.+||+.+.+-...
T Consensus 96 d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~---------------~-----~~~~~~~~~yd~~~~~W~~~ 152 (308)
T 1zgk_A 96 NPMTNQWSPCAPMSVPRNRIGVGVI---DGHIYAVGGSH---------------G-----CIHHNSVERYEPERDEWHLV 152 (308)
T ss_dssp ETTTTEEEECCCCSSCCBTCEEEEE---TTEEEEECCEE---------------T-----TEECCCEEEEETTTTEEEEC
T ss_pred CCCCCeEeECCCCCcCccccEEEEE---CCEEEEEcCCC---------------C-----CcccccEEEECCCCCeEeEC
Confidence 8877643221 1111111112222 34566665540 0 00024688899877654432
Q ss_pred eeccCCCcccEEEEEecCCCCeeEEeeccC-----CcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCC
Q 016185 192 FAGAGGHRNEVLSVDFHPSDIYRIASCGMD-----NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSN 266 (394)
Q Consensus 192 ~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (394)
-..+ .....- +++.. ++.+++.|+.+ ..+..||+.+..- ...+. +.....
T Consensus 153 ~~~p-~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--------~~~~~-------------~p~~r~ 207 (308)
T 1zgk_A 153 APML-TRRIGV-GVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEW--------RMITA-------------MNTIRS 207 (308)
T ss_dssp CCCS-SCCBSC-EEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEE--------EECCC-------------CSSCCB
T ss_pred CCCC-ccccce-EEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeE--------eeCCC-------------CCCccc
Confidence 2111 111111 22222 56777777764 4578888876321 11110 011111
Q ss_pred ceEEEEEeCcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCC----
Q 016185 267 YVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE---- 337 (394)
Q Consensus 267 ~i~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d---- 337 (394)
.-.++.+.+.+++.|+.+ ..+.+||+.+.+-. .+..++........+ ..++ .+++.|+.+
T Consensus 208 ~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-------~~~~~p~~r~~~~~~--~~~~--~i~v~GG~~~~~~ 276 (308)
T 1zgk_A 208 GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWT-------FVAPMKHRRSALGIT--VHQG--RIYVLGGYDGHTF 276 (308)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE-------ECCCCSSCCBSCEEE--EETT--EEEEECCBCSSCB
T ss_pred cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEE-------ECCCCCCCccceEEE--EECC--EEEEEcCcCCCcc
Confidence 122333446777777664 56889998876421 122222221111222 2244 577777754
Q ss_pred -CcEEEEEecCCCceeeEEec
Q 016185 338 -GKIFVWELQSSPPVLIARLS 357 (394)
Q Consensus 338 -g~i~iwd~~~~~~~~~~~~~ 357 (394)
..+.+||+.+.+...+..++
T Consensus 277 ~~~v~~yd~~~~~W~~~~~~p 297 (308)
T 1zgk_A 277 LDSVECYDPDTDTWSEVTRMT 297 (308)
T ss_dssp CCEEEEEETTTTEEEEEEECS
T ss_pred cceEEEEcCCCCEEeecCCCC
Confidence 45788888877544444443
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.75 E-value=0.027 Score=52.21 Aligned_cols=199 Identities=8% Similarity=-0.065 Sum_probs=118.5
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc-EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR-VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
..+..|+|++. ++.++.+-..++ |..+++........+.. .......+++. +.+..+.++-...+.|.+
T Consensus 37 ~~~~~l~~d~~---~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-----g~~~P~GlAvD--~~~~~LY~tD~~~~~I~v 106 (628)
T 4a0p_A 37 KEASALDFDVT---DNRIYWTDISLKTISRAFMNGSALEHVVEF-----GLDYPEGMAVD--WLGKNLYWADTGTNRIEV 106 (628)
T ss_dssp SCEEEEEEETT---TTEEEEEETTTTEEEEEETTSCSCEEEECS-----SCSCCCEEEEE--TTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEECC---CCEEEEEECCCCeEEEEECCCCCcEEEEeC-----CCCCcceEEEE--eCCCEEEEEECCCCEEEE
Confidence 45789999982 456666655555 88888765443222221 11233456665 655536666667789999
Q ss_pred EECCCCeeEEEEE-ecCCceeEEEEcCCCCcEEEEc-eeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEE
Q 016185 113 IDVSNEKLHKSFV-GHGDSINEIRTQPLKPSLVVSA-SKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICIL 190 (394)
Q Consensus 113 wd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~-~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~ 190 (394)
.++.... ...+. ..-.....|++.|..+.++++- +. .+.|...++.......
T Consensus 107 ~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~-------------------------~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 107 SKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGG-------------------------KPKIDRAAMDGSERTT 160 (628)
T ss_dssp EETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSS-------------------------SCEEEEEETTSCSCEE
T ss_pred EecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCC-------------------------CCEEEEEeCCCCceEE
Confidence 9986443 33332 3344568999998566555553 22 4567777775443333
Q ss_pred EeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEE
Q 016185 191 IFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC 270 (394)
Q Consensus 191 ~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 270 (394)
... .-.....|++++.++.++++-...+.|..+|+..... ..+........+
T Consensus 161 l~~----~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~------------------------~v~~~~l~~P~g 212 (628)
T 4a0p_A 161 LVP----NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR------------------------EVIADDLPHPFG 212 (628)
T ss_dssp EEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC------------------------EEEEECCSCEEE
T ss_pred EEC----CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce------------------------EEeeccCCCceE
Confidence 332 4456789999984456566666778899999876211 111122233456
Q ss_pred EEEeCcEE-EEeecCCeEEEecCCCCC
Q 016185 271 NRWLGDFI-LSKSVDNEIVLWEPKMKE 296 (394)
Q Consensus 271 ~~~~~~~l-~~~~~dg~i~~~d~~~~~ 296 (394)
+++.++.+ ++-...+.|...|..+++
T Consensus 213 lav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 213 LTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEECCEEEEecCCCCEEEEEECCCCC
Confidence 66664444 444457778888866554
No 309
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.73 E-value=0.022 Score=50.64 Aligned_cols=259 Identities=8% Similarity=-0.038 Sum_probs=132.0
Q ss_pred EEEEEEEcCC-CCcEEEEeecCCeEEEEECCCCeeEEEEEec---CCceeEEEE-------cCCCCcEEEEceeeeEEee
Q 016185 87 YTVSWACNVD-GIPFLVAGGINGIIRVIDVSNEKLHKSFVGH---GDSINEIRT-------QPLKPSLVVSASKVIIISS 155 (394)
Q Consensus 87 ~~~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~l~s~~~~i~~~~ 155 (394)
..+++. |. ...++++-...+.|++.|++++.....+... ......++| ++ ++..|+.+..
T Consensus 142 ~~la~d--p~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~------ 212 (496)
T 3kya_A 142 GRLAFD--PLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAID------ 212 (496)
T ss_dssp EEEEEE--TTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEEC------
T ss_pred CEEEEc--cCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeC------
Confidence 456665 73 4424444444577999998877655444332 234789999 98 5554444443
Q ss_pred ccceeeeeeeccceeeeccCC------cEEEEEecC-CcEE-----EEeeccCCCcccEEEEEecCCCCeeEEeeccCCc
Q 016185 156 LSLICLLLFIRSNCLRVGQDE------SVRLWNVQT-GICI-----LIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNT 223 (394)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~d~------~i~vwd~~~-~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~ 223 (394)
.++ .|.+.+... ++.. ..+. --.....++++|.++.++++-..++.
T Consensus 213 ------------------~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~----~~~~p~giavdp~~g~LYvtd~~~g~ 270 (496)
T 3kya_A 213 ------------------YDGKGDESPSVYIIKRNADGTFDDRSDIQLIA----AYKQCNGATIHPINGELYFNSYEKGQ 270 (496)
T ss_dssp ------------------CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE----EESCCCCEEECTTTCCEEEEETTTTE
T ss_pred ------------------CCCCcccCceEEEEecCCCCceeecccceeec----cCCCceEEEEcCCCCeEEEEECCCCE
Confidence 021 255555333 1221 2222 11233567889855666777778889
Q ss_pred EEEEEcc-------ccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcE-EEEeecCCeEEEecCC
Q 016185 224 VKIWSMK-------EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDF-ILSKSVDNEIVLWEPK 293 (394)
Q Consensus 224 v~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~-l~~~~~dg~i~~~d~~ 293 (394)
|..+|+. ++.... +....... ....+... .....-..++++ +++ .++-.....|+.++..
T Consensus 271 V~r~d~~~~~~~~~tg~~~t-------p~~~~~~g--~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 271 VFRLDLVDYFKTIKNGGSWD-------PIVKNNPN--TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEECHHHHHHHHHTTCCCC-------CBGGGCTT--TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEecccccccccCceeec-------cccccccc--ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 9999997 321100 00000000 00011111 122345678887 664 4454567888886654
Q ss_pred CCCCCCCCCcceeccc--cc---------CCCCCeE-EEEEe-------ecCCcceEEEEeCCCcEEEEEecCCCceeeE
Q 016185 294 MKEQSPGEGTADILQK--YP---------VPECDIW-FIKFS-------CDFHYNAAAIGNREGKIFVWELQSSPPVLIA 354 (394)
Q Consensus 294 ~~~~~~~~~~~~~~~~--~~---------~~~~~i~-~~~~~-------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 354 (394)
........ ....... .. ..-.... .++.. +++ .++++=...+.|+.++ .++. +.
T Consensus 341 g~~~~~~~-~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g--~lyVaD~~N~rIr~i~-~~G~---v~ 413 (496)
T 3kya_A 341 EIKKEFIT-PYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY--DFYFVDRLNFCVRKVT-PEGI---VS 413 (496)
T ss_dssp TTTTEECC-CEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE--EEEEEEGGGTEEEEEC-TTCB---EE
T ss_pred CCcceecc-cEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC--eEEEEECCCCEEEEEe-CCCC---EE
Confidence 32100000 0000000 00 0011233 34443 334 4666666778899888 3342 33
Q ss_pred EeccC------------C----------ccCCeeEEEeccC-CCEEEEeccCCeEEEEEcCC
Q 016185 355 RLSHA------------Q----------SKSPIRQTAMSYD-GSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 355 ~~~~~------------~----------~~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~ 393 (394)
++... + .-.....|+++++ +.+.++=..+..|+.++++.
T Consensus 414 TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 414 TYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp EEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred EEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 33210 1 1235778999997 76666666788999998864
No 310
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.71 E-value=0.013 Score=49.08 Aligned_cols=237 Identities=8% Similarity=-0.017 Sum_probs=111.1
Q ss_pred EEEEeecCCeEEEEECCCCeeEE-EEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcE
Q 016185 100 FLVAGGINGIIRVIDVSNEKLHK-SFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESV 178 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i 178 (394)
+++.|+ ..+..||..+++-.. .+.............. ++.+++.|+.. ..+.-........+
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~--------------~~~~~~~~~~~~~~ 69 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTK-ENQVFVAGGLF--------------YNEDNKEDPMSAYF 69 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECT-TCCEEEEEEEE--------------ECSSCSSSCEEEEE
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEE-CCEEEEEcCcc--------------cCCCCCccccccce
Confidence 455565 578999998876432 1111111222222233 55666666620 00000000001237
Q ss_pred EEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC--------CcEEEEEccccceeeccccccCCCCCCCC
Q 016185 179 RLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD--------NTVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 179 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
.+||..+++-... ......... .+++.. ++.+++.|+.+ ..+.+||+.+.+- ...+
T Consensus 70 ~~~d~~~~~W~~~-~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W--------~~~~---- 133 (315)
T 4asc_A 70 LQFDHLDSEWLGM-PPLPSPRCL-FGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKW--------GESD---- 133 (315)
T ss_dssp EEEETTTTEEEEC-CCBSSCEES-CEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEE--------EECC----
T ss_pred EEecCCCCeEEEC-CCCCcchhc-eeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcE--------eECC----
Confidence 7888877654322 211011111 122222 56777777743 4588888877321 1111
Q ss_pred ccccccceeeeecCCCceEEEEEeCcEEEEeec------CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEee
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSV------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC 324 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 324 (394)
.+......-.++...+++++.|+. -..+.+||..+.+-. .+...+.......++ ..
T Consensus 134 ---------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~~~~~~--~~ 195 (315)
T 4asc_A 134 ---------PLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWK-------ELAPMQTARSLFGAT--VH 195 (315)
T ss_dssp ---------CCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEE-------ECCCCSSCCBSCEEE--EE
T ss_pred ---------CCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEE-------ECCCCCCchhceEEE--EE
Confidence 011111112223344667777765 246888998876311 122222221111222 22
Q ss_pred cCCcceEEEEeCCC-----cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCC--------------e
Q 016185 325 DFHYNAAAIGNREG-----KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG--------------A 385 (394)
Q Consensus 325 ~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg--------------~ 385 (394)
++ .+++.|+.++ .+.+||..+.+...+..++ ........+.+ ++++++.|+.++ .
T Consensus 196 ~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~ 269 (315)
T 4asc_A 196 DG--RIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFP--QERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELND 269 (315)
T ss_dssp TT--EEEEEEEECSSSEEEEEEEEETTTTEEEEECCCS--SCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CC--EEEEEeccCCCCccceEEEEECCCCeEEECCCCC--CcccceeEEEE--CCEEEEECCccccCcCCccccccccCc
Confidence 45 5777777554 5888898877544443333 11122222233 567777777642 3
Q ss_pred EEEEEcCC
Q 016185 386 IWRWDAIP 393 (394)
Q Consensus 386 i~iwd~~~ 393 (394)
+.+||+++
T Consensus 270 v~~yd~~~ 277 (315)
T 4asc_A 270 IWRYNEEE 277 (315)
T ss_dssp EEEEETTT
T ss_pred EEEecCCC
Confidence 77888764
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.70 E-value=0.052 Score=54.03 Aligned_cols=177 Identities=13% Similarity=0.059 Sum_probs=101.7
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 254 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (394)
.|.|.+|++..++.....+. ...+++++++-- ++.++++. ..+|++|++...+.
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~--~v~g~v~al~~~--~g~Lla~i--g~~l~vy~l~~~~~-------------------- 916 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEK--EVKGAVYSMVEF--NGKLLASI--NSTVRLYEWTTEKE-------------------- 916 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEE--EESSCEEEEEEE--TTEEEEEE--TTEEEEEEECTTSC--------------------
T ss_pred ceEEEEEEEECCEEEEEEEE--EcCCcCEEEeee--CCEEEEEc--CCEEEEEECCCCce--------------------
Confidence 68899999975543333221 246789998866 45544443 47899999986221
Q ss_pred cccee-eeecCCCc-eEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEE
Q 016185 255 QFPVF-IASVHSNY-VDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 332 (394)
Q Consensus 255 ~~~~~-~~~~~~~~-i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 332 (394)
+. ....+... +..+...+++++.|..-..+.++..+.... ....+.+ ......++++.|-.+. .++
T Consensus 917 ---L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~-----~L~~~a~-D~~~~~vta~~~ld~~---t~l 984 (1158)
T 3ei3_A 917 ---LRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG-----NFEEIAR-DFNPNWMSAVEILDDD---NFL 984 (1158)
T ss_dssp ---EEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTT-----EEEEEEE-CCSCBCEEEEEEEETT---EEE
T ss_pred ---EEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCC-----eEEEEEe-ecccccEEEEEEEccC---cEE
Confidence 11 11111111 234545588999998877777755432211 1111111 2334578888887665 678
Q ss_pred EEeCCCcEEEEEecCCCc-----eeeEEeccCCccCCeeEEE---eccC---------CCEEEEeccCCeEEEE
Q 016185 333 IGNREGKIFVWELQSSPP-----VLIARLSHAQSKSPIRQTA---MSYD---------GSTILSCCEDGAIWRW 389 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~v~~~~---~s~~---------~~~l~s~~~dg~i~iw 389 (394)
.+..+|.|.+........ ..+...........|+++. +.+. ...++-++.+|.|.+.
T Consensus 985 ~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 985 GAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred EEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 899999999998865321 1111111111125677765 3332 2347778889988764
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.68 E-value=0.018 Score=48.32 Aligned_cols=142 Identities=13% Similarity=0.034 Sum_probs=70.1
Q ss_pred CcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeecc-C-----CcEEEEEccccceeeccccccCCCCCCC
Q 016185 176 ESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGM-D-----NTVKIWSMKEFWTYVEKSFTWTDLPSKF 249 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~ 249 (394)
..+.+||..+++-...-..+ .....- +++.. ++.+++.|+. + ..+.+||+.+..- ...+
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p-~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--------~~~~--- 181 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLP-YVVYGH-TVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKFEW--------KELA--- 181 (315)
T ss_dssp CCEEEEETTTTEEEECCCCS-SCCBSC-EEEEE--TTEEEEECCBCTTSCBCCCEEEEETTTTEE--------EECC---
T ss_pred ceEEEECCCCCcEeECCCCC-Ccccce-eEEEE--CCEEEEEeCCCCCCcccceEEEEeCCCCeE--------EECC---
Confidence 46888998876543321111 111111 22222 5677777776 2 4688888877321 1111
Q ss_pred CccccccceeeeecCCCceEEEEEeCcEEEEeecCC-----eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEee
Q 016185 250 PTKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVDN-----EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSC 324 (394)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 324 (394)
.+......-.++...+++++.|+.++ .+.+||+.+.+- ..+...+........+ ..
T Consensus 182 ----------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~--~~ 242 (315)
T 4asc_A 182 ----------PMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKW-------APFEAFPQERSSLSLV--SL 242 (315)
T ss_dssp ----------CCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEE-------EEECCCSSCCBSCEEE--EE
T ss_pred ----------CCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeE-------EECCCCCCcccceeEE--EE
Confidence 01111111223334477777777654 588899887631 1122222222222222 23
Q ss_pred cCCcceEEEEeCC--------------CcEEEEEecCCCceee
Q 016185 325 DFHYNAAAIGNRE--------------GKIFVWELQSSPPVLI 353 (394)
Q Consensus 325 ~~~~~~l~~~~~d--------------g~i~iwd~~~~~~~~~ 353 (394)
++ .+++.|+.+ ..+.+||+.+.+-..+
T Consensus 243 ~~--~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 243 VG--TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp TT--EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred CC--EEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 44 567777653 2467888877754433
No 313
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.50 E-value=0.075 Score=50.69 Aligned_cols=289 Identities=11% Similarity=0.063 Sum_probs=143.5
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeeccc-CCcccceEEEEEEEcCCCCcEEEEeecCCeEEE
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVD-EDKEESFYTVSWACNVDGIPFLVAGGINGIIRV 112 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~v 112 (394)
..|.++.... ++.+.+.. .+++..++..++... .+..... ......|.++... +++. .|..|.. +-+..
T Consensus 146 ~~i~~i~~d~----~g~lWigt-~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d--~~~~-~lWigt~-~Gl~~ 215 (758)
T 3ott_A 146 NTIYSIIRTK----DNQIYVGT-YNGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLED--TTRQ-CVWIGTE-GYLFQ 215 (758)
T ss_dssp SCEEEEEECT----TCCEEEEE-TTEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEE--TTTT-EEEEEEE-EEEEE
T ss_pred CeEEEEEEcC----CCCEEEEe-CCCHhhCccCCCceE-EecCCCccccccceeEEEEEE--CCCC-EEEEEEC-CCCeE
Confidence 4577776654 56776654 467888997665432 2221100 0012236666544 6665 5555654 45788
Q ss_pred EECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEe
Q 016185 113 IDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIF 192 (394)
Q Consensus 113 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~ 192 (394)
+|..+++...........|.++...+ ++.+.+ |+. + -+.+++..+++.....
T Consensus 216 ~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-gT~-------------------------~-Gl~~~~~~~~~~~~~~ 267 (758)
T 3ott_A 216 YFPSTGQIKQTEAFHNNSIKSLALDG-NGDLLA-GTD-------------------------N-GLYVYHNDTTPLQHII 267 (758)
T ss_dssp EETTTTEEEEEEEEEEEEEEEEEECT-TCCEEE-EET-------------------------T-EEEEECCTTSCCEEEC
T ss_pred EcCCCCeEEeccCCCCCeEEEEEEcC-CCCEEE-EeC-------------------------C-ceeEEecCCCcEEEEE
Confidence 89877654322111234577777665 444433 333 4 4778887665543322
Q ss_pred ecc----CCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCce
Q 016185 193 AGA----GGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYV 268 (394)
Q Consensus 193 ~~~----~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 268 (394)
... .-....|.++..+. ++. |..|+..| +.++.....-.... .... ........|
T Consensus 268 ~~~~~~~~l~~~~i~~i~~D~-~g~-lWiGT~~G-l~~~~~~~~~~~~~-----------------~~~~-~~~~~~~~v 326 (758)
T 3ott_A 268 HDSRNIQSLTNNIIWNIFADQ-EHN-IWLGTDYG-ISLSRYNSALQFIP-----------------ISQI-TGTGDGNQF 326 (758)
T ss_dssp CCTTCTTSCSCSCEEEEEECT-TCC-EEEEESSS-EEEECCCC-CEEEE-----------------HHHH-SCSCCCCBE
T ss_pred cCCCCcCcCCcCeEEEEEEcC-CCC-EEEEeCCc-ccccccCCceeEEe-----------------cccC-CCCCCCceE
Confidence 100 01234688998886 555 55555566 54443221000000 0000 000123457
Q ss_pred EEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecc----cccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEE
Q 016185 269 DCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQ----KYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVW 343 (394)
Q Consensus 269 ~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iw 343 (394)
.++..+ ...+..|+.+| +..++..+++... ..... ........|.++.-..++ .|..|+ ++-|..|
T Consensus 327 ~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~v~~i~~d~~g---~lWigt-~~GL~~~ 397 (758)
T 3ott_A 327 YSLFRDSKGFYWFGGANG-LIRFTDPAGERHD----AIWYRMGDKTYPLSHNRIRHIYEDKEQ---QLWIAT-DGSINRY 397 (758)
T ss_dssp EEEEECTTCCEEEEETTE-EEEESCTTSSCCC----CEEECTTCSSSCCSCSCEEEEEECTTS---CEEEEE-TTEEEEE
T ss_pred EEEEEcCCCCEEEeeCCc-ceeecccccccce----eEEeccCCcCCCCCCCceEEEEECCCC---CEEEEe-CCcHhhc
Confidence 777766 33455555555 6666655432100 00000 001123457777766666 355566 4569999
Q ss_pred EecCCCceeeEEeccCC--ccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 344 ELQSSPPVLIARLSHAQ--SKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 344 d~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
|..+++........... ....|.++...+++.+.+ |+..+-|.++|.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~ 446 (758)
T 3ott_A 398 DYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDK 446 (758)
T ss_dssp ETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEH
T ss_pred CcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEcc
Confidence 98776322211111101 234688888877776555 554445666663
No 314
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.49 E-value=0.038 Score=47.17 Aligned_cols=104 Identities=13% Similarity=0.103 Sum_probs=57.7
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecc-cCCcccceEEEEEEEcCC---CCcEEEEe-ecC-
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYV-DEDKEESFYTVSWACNVD---GIPFLVAG-GIN- 107 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~---~~~~l~s~-~~d- 107 (394)
..-..|+|.| +|+++++-..+.|.+++ .++. ..+.... ..........+++. |+ +. .|+.+ ...
T Consensus 31 ~~P~~ia~~p----dG~l~V~e~~g~I~~i~--~g~~-~~~~~~~v~~~g~~~p~gia~~--pdf~~~g-~lYv~~~~~~ 100 (352)
T 2ism_A 31 EVPWALAFLP----DGGMLIAERPGRIRLFR--EGRL-STYAELSVYHRGESGLLGLALH--PRFPQEP-YVYAYRTVAE 100 (352)
T ss_dssp SCEEEEEECT----TSCEEEEETTTEEEEEE--TTEE-EEEEECCCCCSTTCSEEEEEEC--TTTTTSC-EEEEEEEECT
T ss_pred CCceEEEEcC----CCeEEEEeCCCeEEEEE--CCCc-cEeecceEeecCCCCceeEEEC--CCCCCCC-EEEEEEecCC
Confidence 3467999998 78888876665588888 4432 2222111 01123455667766 87 44 34443 322
Q ss_pred ----CeEEEEECCCCee------EEEEEe---cCCceeEEEEcCCCCcEEEEce
Q 016185 108 ----GIIRVIDVSNEKL------HKSFVG---HGDSINEIRTQPLKPSLVVSAS 148 (394)
Q Consensus 108 ----g~i~vwd~~~~~~------~~~~~~---~~~~v~~~~~~~~~~~~l~s~~ 148 (394)
+.|..++...++. +..+.. .......++|.| ++.++++.+
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G 153 (352)
T 2ism_A 101 GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTG 153 (352)
T ss_dssp TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECC
T ss_pred CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEEC
Confidence 6788888764321 111221 111246899999 566666644
No 315
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.44 E-value=0.044 Score=46.80 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=36.0
Q ss_pred cceEEEEecCCc--EEEEEcCC-CceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeec-C---------CeEEEEE
Q 016185 48 YFNVFATVGGNR--VTVYQCLE-GGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGI-N---------GIIRVID 114 (394)
Q Consensus 48 ~~~~las~~~d~--i~vw~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~-d---------g~i~vwd 114 (394)
++.+++.|+.++ +.+||+.+ ......+...... .... .+++ . -+++ +++.|+. + ..+.+||
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~-~R~~-~~~~-~--~~~~-lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGG-PRDQ-ATSA-F--IDGN-LYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTC-CCBS-CEEE-E--ETTE-EEEECCEEECTTSCEEECCCEEEEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCC-cCcc-ceEE-E--ECCE-EEEEcCCCCCCCccceeeccEEEEe
Confidence 467888887654 99999874 2333344322100 1111 1122 2 2466 6666765 2 4688899
Q ss_pred CCCCe
Q 016185 115 VSNEK 119 (394)
Q Consensus 115 ~~~~~ 119 (394)
+.+.+
T Consensus 93 ~~~~~ 97 (357)
T 2uvk_A 93 PKTNS 97 (357)
T ss_dssp TTTTE
T ss_pred CCCCc
Confidence 87764
No 316
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.39 E-value=0.047 Score=45.80 Aligned_cols=106 Identities=14% Similarity=0.183 Sum_probs=55.5
Q ss_pred EeCcEEEEeec------CCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCC-----CcEE
Q 016185 273 WLGDFILSKSV------DNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNRE-----GKIF 341 (394)
Q Consensus 273 ~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~d-----g~i~ 341 (394)
..+.+++.|+. -..+.+||+.+.+-. .+...+.......++ ..++ .+++.|+.+ ..+.
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~~~~~~--~~~~--~iyv~GG~~~~~~~~~~~ 225 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK-------DLAPMKTPRSMFGVA--IHKG--KIVIAGGVTEDGLSASVE 225 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEE-------EECCCSSCCBSCEEE--EETT--EEEEEEEEETTEEEEEEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEE-------ECCCCCCCcccceEE--EECC--EEEEEcCcCCCCccceEE
Confidence 34666676664 235889998876411 122222211111222 2344 466777643 3577
Q ss_pred EEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccC--------------CeEEEEEcCC
Q 016185 342 VWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED--------------GAIWRWDAIP 393 (394)
Q Consensus 342 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d--------------g~i~iwd~~~ 393 (394)
+||+.+.+...+..++ ........+. -++++++.|+.+ ..+.+||+.+
T Consensus 226 ~yd~~~~~W~~~~~~p--~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~ 287 (318)
T 2woz_A 226 AFDLKTNKWEVMTEFP--QERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK 287 (318)
T ss_dssp EEETTTCCEEECCCCS--SCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT
T ss_pred EEECCCCeEEECCCCC--CcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC
Confidence 8998887544443333 1111222222 256777777754 3588888764
No 317
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.30 E-value=0.056 Score=44.99 Aligned_cols=176 Identities=9% Similarity=-0.029 Sum_probs=99.5
Q ss_pred cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeecc----CCCcccE
Q 016185 127 HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGA----GGHRNEV 202 (394)
Q Consensus 127 ~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~----~~~~~~i 202 (394)
...--.+++|.+.++.++++.-. .+.|..||...+......... ......+
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~-------------------------~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~ 65 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLY-------------------------KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQM 65 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETT-------------------------TTEEEEECTTTCCEEEECCTTTCCSSCCSEEE
T ss_pred cccCCcCccCcCCCCEEEEEecc-------------------------CCEEEEEcCCCCeEEEEecCCccccCCCccee
Confidence 33445678898755555555556 899999998766544332210 0012246
Q ss_pred EEEEe---cCCCCeeEEeec-------------cCCcEEEEEcc---ccceeeccccccCCCCCCCCccccccceeeeec
Q 016185 203 LSVDF---HPSDIYRIASCG-------------MDNTVKIWSMK---EFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASV 263 (394)
Q Consensus 203 ~~~~~---~~~~~~~l~s~~-------------~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (394)
..|.| .| ++.++++.. .+..|..||+. +++........ ..........+
T Consensus 66 sGl~~~~~D~-~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~-----------~~~~~~~~~~g 133 (334)
T 2p9w_A 66 SGLSLLTHDN-SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFE-----------KVQDEFEKKAG 133 (334)
T ss_dssp EEEEESSSSS-CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESH-----------HHHHHHHHHHS
T ss_pred eEEEEeccCC-CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCc-----------ccccccccccc
Confidence 89999 68 777777543 25779999998 53211000000 00000000000
Q ss_pred -CCCceEEEEEe--CcEEEEeecC-CeEEEecCCCCCCCCCCCcceecccc--cCCCCCeEEEEEeecCCcceEEEEeCC
Q 016185 264 -HSNYVDCNRWL--GDFILSKSVD-NEIVLWEPKMKEQSPGEGTADILQKY--PVPECDIWFIKFSCDFHYNAAAIGNRE 337 (394)
Q Consensus 264 -~~~~i~~~~~~--~~~l~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~l~~~~~d 337 (394)
-......++.+ |+..++++.. +.|...+........ ..... .......+.|++.|++ ..|++....
T Consensus 134 ~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~------~~~~~~~~~~~~G~nGIv~~pdg--~~Liv~~~~ 205 (334)
T 2p9w_A 134 KRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST------FAWESGNGGQRPGYSGITFDPHS--NKLIAFGGP 205 (334)
T ss_dssp SCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE------EEECCCCSSSCCSCSEEEEETTT--TEEEEESSS
T ss_pred ccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee------eeecCCCcccccCcceEEEeCCC--CEEEEEcCC
Confidence 11235667776 7777877777 888777766432100 00011 1122346789999999 456666559
Q ss_pred CcEEEEEecC
Q 016185 338 GKIFVWELQS 347 (394)
Q Consensus 338 g~i~iwd~~~ 347 (394)
|.|..+|+..
T Consensus 206 g~L~~fD~~~ 215 (334)
T 2p9w_A 206 RALTAFDVSK 215 (334)
T ss_dssp SSEEEEECSS
T ss_pred CeEEEEcCCC
Confidence 9999999884
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.23 E-value=0.04 Score=54.88 Aligned_cols=226 Identities=9% Similarity=0.079 Sum_probs=123.2
Q ss_pred EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEEecCCceeEEEEcCC
Q 016185 60 VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPL 139 (394)
Q Consensus 60 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 139 (394)
|.|-|+..+..+..- ++.+=+--.+|..+ .+|.= ...++.|+|+++...++++.- ..+|.--.|-.
T Consensus 50 vvIidl~~~~~~~rr----------pi~AdsAIMnP~~~-iiALr-ag~~lQiFnl~~k~klks~~~-~e~VvfWkWis- 115 (1630)
T 1xi4_A 50 VVIIDMNDPSNPIRR----------PISADSAIMNPASK-VIALK-AGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWIS- 115 (1630)
T ss_pred EEEEECCCCCCcccc----------cccchhhccCCCcc-eEEEe-cCCeEEEeehHHhhhhccccc-CCCceEEEecC-
Confidence 888887776543111 11121222347676 55544 378999999998888777764 45677888875
Q ss_pred CCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC-cEEEEeeccCCC----cccEEEEEecCCCCee
Q 016185 140 KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG-ICILIFAGAGGH----RNEVLSVDFHPSDIYR 214 (394)
Q Consensus 140 ~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~----~~~i~~~~~~~~~~~~ 214 (394)
.+.|+-.+ +..|..|++... .+.+.+. .| ...|..-..++ +.++
T Consensus 116 -~~~l~lVT--------------------------~~aVyHW~~~~~s~P~k~fd---R~~~L~~~QIinY~~d~-~~kW 164 (1630)
T 1xi4_A 116 -LNTVALVT--------------------------DNAVYHWSMEGESQPVKMFD---RHSSLAGCQIINYRTDA-KQKW 164 (1630)
T ss_pred -CCeeEEEc--------------------------CCeEEEeccCCCCccHHHHh---cchhcccCeeEEeeeCC-CCCe
Confidence 24444444 567999999642 3333333 22 34566667777 6666
Q ss_pred EEeec-------cCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEe----Cc-EEEEee
Q 016185 215 IASCG-------MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL----GD-FILSKS 282 (394)
Q Consensus 215 l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~-~l~~~~ 282 (394)
++..+ ..|.+.+|....... ..+++|...-..+... +. .+..+.
T Consensus 165 ~~l~gi~~~~~~v~G~mQLyS~er~~s------------------------Q~iegha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 165 LLLTGISAQQNRVVGAMQLYSVDRKVS------------------------QPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred EEEEeeccCCCcccceeeeeecccccc------------------------hhhhHhHhhhheeccCCCCCCceEEEEEE
Confidence 65433 358888998877321 1233333322222222 11 111111
Q ss_pred ---cCCeEEEecCCCC-CCCCCCCcceecccccC---CCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCceeeEE
Q 016185 283 ---VDNEIVLWEPKMK-EQSPGEGTADILQKYPV---PECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVLIAR 355 (394)
Q Consensus 283 ---~dg~i~~~d~~~~-~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 355 (394)
..+.+++-++... ...+... ...+.-+.. ...-..++..++.. ..+..-+.-|.|++||+.++......+
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~-kk~~~~~~~~~~~~Dfpv~~~vs~k~--g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFP-KKAVDVFFPPEAQNDFPVAMQISEKH--DVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCc-cccccccCCcccccCcceEEEecccc--CEEEEEecCceEEEEecccchhhhhcc
Confidence 1368888888553 1100000 001111111 11122345556555 578888899999999999986544444
Q ss_pred ec
Q 016185 356 LS 357 (394)
Q Consensus 356 ~~ 357 (394)
+.
T Consensus 298 is 299 (1630)
T 1xi4_A 298 IS 299 (1630)
T ss_pred cc
Confidence 33
No 319
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.13 E-value=0.1 Score=44.51 Aligned_cols=61 Identities=11% Similarity=0.089 Sum_probs=38.7
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCcee----eEEeccCCccCCeeEEEeccCCCEEEEec
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPVL----IARLSHAQSKSPIRQTAMSYDGSTILSCC 381 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 381 (394)
....++| .++ .++++....+.|...++....... ...+. .-...+..+++.|||.++++..
T Consensus 269 ap~G~~~-~~G--~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 269 PPGNLAF-FRG--DLYVAGLRGQALLRLVLEGERGRWRVLRVETAL--SGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CEEEEEE-ETT--EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--ESSCCEEEEEECTTSCEEEEEC
T ss_pred CCcceEE-ECC--EEEEEECCCCEEEEEEECCCCcceeecchheec--ccCCCeeEEEECCCCcEEEEEe
Confidence 4567777 455 466666667788888887553211 12221 1125789999999998777654
No 320
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.12 E-value=0.1 Score=44.56 Aligned_cols=51 Identities=8% Similarity=-0.087 Sum_probs=27.2
Q ss_pred cEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCC------eEEEEEcCC
Q 016185 339 KIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDG------AIWRWDAIP 393 (394)
Q Consensus 339 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~ 393 (394)
.+.+||+.+.+...+..++. ....-.++ ..++++++.|+.++ .|.++++++
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~--~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~ 342 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQ--GRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKD 342 (357)
T ss_dssp CCEEEECC---CEEEEECSS--CCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-C
T ss_pred eEEEEecCCCceeeCCCCCC--CcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcC
Confidence 57899999887666665552 12222222 23677888888553 355556543
No 321
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.02 E-value=0.12 Score=43.34 Aligned_cols=140 Identities=16% Similarity=0.068 Sum_probs=68.0
Q ss_pred cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccC------CcEEEEEccccceeeccccccCCCCCCCC
Q 016185 177 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMD------NTVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 177 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
.+.+||..+.+-...-..+ .....- +++.. ++.+++.|+.+ ..+.+||+.+..-. ..+
T Consensus 128 ~~~~yd~~~~~W~~~~~~p-~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~--------~~~---- 191 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLP-IKVYGH-NVISH--NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK--------DLA---- 191 (318)
T ss_dssp EEEEEETTTTEEEEECCCS-SCEESC-EEEEE--TTEEEEECCEESSSCBCCCEEEEETTTTEEE--------EEC----
T ss_pred eEEEEeCCCCCEeECCCCC-Cccccc-EEEEE--CCEEEEEcCCCCCCCccceEEEEcCCCCEEE--------ECC----
Confidence 5788888776544332111 111111 22222 66777777642 35888888774311 110
Q ss_pred ccccccceeeeecCCCceEEEEEeCcEEEEeecC-----CeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeec
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRWLGDFILSKSVD-----NEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD 325 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (394)
.+......-.++...+.+++.|+.+ ..+.+||+.+.+-. .+...+....... +...+
T Consensus 192 ---------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-------~~~~~p~~r~~~~--~~~~~ 253 (318)
T 2woz_A 192 ---------PMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE-------VMTEFPQERSSIS--LVSLA 253 (318)
T ss_dssp ---------CCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEE-------ECCCCSSCCBSCE--EEEET
T ss_pred ---------CCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEE-------ECCCCCCcccceE--EEEEC
Confidence 0111111112333446677777643 35778998876421 1222222211111 22234
Q ss_pred CCcceEEEEeCC--------------CcEEEEEecCCCcee
Q 016185 326 FHYNAAAIGNRE--------------GKIFVWELQSSPPVL 352 (394)
Q Consensus 326 ~~~~~l~~~~~d--------------g~i~iwd~~~~~~~~ 352 (394)
+ .+++.|+.+ ..+.+||+.+.+...
T Consensus 254 ~--~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 254 G--SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp T--EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred C--EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 4 567777653 357888888765433
No 322
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.83 E-value=0.17 Score=43.57 Aligned_cols=153 Identities=16% Similarity=0.102 Sum_probs=90.3
Q ss_pred CCcEEEEEecCCcEEEEeeccC-CCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 175 DESVRLWNVQTGICILIFAGAG-GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
++.||.-++..+...+.+.... -.-..|..+..+| +|++|+..+ +..|.+..+..+....... ...
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~-----------~~~ 106 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDV-----------SIQ 106 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCH-----------HHH
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCccc-----------ccc
Confidence 6778888877544444554210 0123678899999 999888876 5689999998522111000 000
Q ss_pred cccceeeeec------CCCceEEEEEe-----CcEEEEeecCCeEEEecCCCCCCCCCCCcceec--ccccCCCCCeEEE
Q 016185 254 VQFPVFIASV------HSNYVDCNRWL-----GDFILSKSVDNEIVLWEPKMKEQSPGEGTADIL--QKYPVPECDIWFI 320 (394)
Q Consensus 254 ~~~~~~~~~~------~~~~i~~~~~~-----~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~ 320 (394)
.......+.. ....|..+.|+ +..|++-..|+.|++||+......+. ...+.. .........|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 0001111111 35678889997 66899999999999999997432221 000000 1122233678999
Q ss_pred EEeecCCcceEEE--EeCCCcEEEE
Q 016185 321 KFSCDFHYNAAAI--GNREGKIFVW 343 (394)
Q Consensus 321 ~~~~~~~~~~l~~--~~~dg~i~iw 343 (394)
+|..++ ..|.. .+..|.|+-.
T Consensus 186 ~Fg~~~--lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDG--LTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTS--SCEEEEECTTSCEEEEE
T ss_pred EEcCCC--cEEEEEecCCCCCEEEE
Confidence 999987 44555 5578887643
No 323
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.74 E-value=0.19 Score=41.65 Aligned_cols=242 Identities=12% Similarity=0.084 Sum_probs=139.0
Q ss_pred cceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC-CeeEEEEEe
Q 016185 48 YFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-EKLHKSFVG 126 (394)
Q Consensus 48 ~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~ 126 (394)
..+.+|--....+.|||+++.+.++... ..++|.--.|- .+.. |+-.. +..|+-|++.. ..+.+.+..
T Consensus 77 ~~~ViALrag~~LQiFnletK~klks~~------~~e~VvfWkWi--s~~~--L~lVT-~taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 77 ASKVIALKAGKTLQIFNIEMKSKMKAHT------MTDDVTFWKWI--SLNT--VALVT-DNAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp SSSEEEEEETTEEEEEETTTTEEEEEEE------CSSCEEEEEEC--SSSE--EEEEE-SSEEEEEESSTTCCCEEEEEC
T ss_pred CccEEEEecCCeEEEechHHhhhhccee------cCCccEEEEec--CCCe--EEEEc-CCcEEEEcccCCCCCceeeec
Confidence 5677777765559999999998888776 33456555554 4443 44443 34799999974 467777776
Q ss_pred cC----CceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccE
Q 016185 127 HG----DSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEV 202 (394)
Q Consensus 127 ~~----~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i 202 (394)
|. ..|..-..+++..-++++|-. ..++ .-.|.+.+|..+.+ ..+.+. +|....
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~--------------~~~~-----~v~G~mQLYS~er~-~sQ~ie---Ghaa~F 202 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGIS--------------AQQN-----RVVGAMQLYSVDRK-VSQPIE---GHAASF 202 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEE--------------EETT-----EEEEEEEEEETTTT-EEEEEC---CSEEEE
T ss_pred chhcccceEEEEEECCCCCEEEEEeEe--------------ccCC-----ccceeEEEEeeccc-ccceee---eeeeee
Confidence 53 356666677733333444321 0011 11578999998654 445555 786666
Q ss_pred EEEEecC--CCCeeEEeecc---CCcEEEEEccccceeeccccccCCCCCCCCccccccceeee---ecCCCceEEEEEe
Q 016185 203 LSVDFHP--SDIYRIASCGM---DNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA---SVHSNYVDCNRWL 274 (394)
Q Consensus 203 ~~~~~~~--~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~ 274 (394)
..+.+.- ....+|+.+.. .+++++-++..... ....+. .+.+... +...+.--++..+
T Consensus 203 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~----------~~~~f~----kk~vdi~fppea~~DFPVamqvs 268 (365)
T 2xzh_A 203 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPT----------GNQPFP----KKAVDVFFPPEAQNDFPVAMQIS 268 (365)
T ss_dssp EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCT----------TCCCCC----CEEEEECCCTTCTTCCEEEEEEE
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCC----------CCCCcc----cccceeeCCccccCCceEEEEec
Confidence 5554432 11234444433 26888888855200 000000 1111111 1123445556666
Q ss_pred --CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 275 --GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 275 --~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
-..+..-+.-|.|++||++++. ++..-+....+|...+...... =++.....|.|.--.++..
T Consensus 269 ~kygviyviTK~G~ihlyDleTgt---------~i~~nrIS~d~iF~ta~~~~~~--Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 269 EKHDVVFLITKYGYIHLYDLETGT---------CIYMNRISGETIFVTAPHEATA--GIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp TTTTEEEEEETTSEEEEEETTTCC---------EEEEEECCSSCEEEEEEEGGGT--EEEEEETTCEEEEEEECTT
T ss_pred ccCCEEEEEeCCcEEEEEEcccCc---------EEEEeccCCCceEEecccCCCC--cEEEEcCCCEEEEEEECcc
Confidence 4467777889999999999987 5555555555665555444432 3555557777776666554
No 324
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.56 E-value=0.3 Score=41.58 Aligned_cols=64 Identities=11% Similarity=-0.008 Sum_probs=40.9
Q ss_pred CCeEEEEEe-------ecCCcceEEEEeCCCcEEEEEecCC-CceeeEEeccCCccCCeeEEEeccCCCEEEEec
Q 016185 315 CDIWFIKFS-------CDFHYNAAAIGNREGKIFVWELQSS-PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC 381 (394)
Q Consensus 315 ~~i~~~~~~-------~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 381 (394)
.....++|. .++ .++++....+.|...++... +......+. .+....+..+++.|||.+.++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G--~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~-~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRG--WLLIACLRGSMLAAVNFGDNMEVRKISTFF-KNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTT--EEEEEETTTTEEEEEEECGGGCEEEEEEEC-TTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCC--cEEEEEcCCCEEEEEEECCCCcccceeeec-cCCCCCeeEEEECCCCcEEEEEe
Confidence 456778884 344 56666667788988888753 211122222 12246789999999998777664
No 325
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.44 E-value=0.36 Score=41.09 Aligned_cols=115 Identities=10% Similarity=0.065 Sum_probs=62.6
Q ss_pred ccceeeeeccCccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecc-cCCcccceEEEEEEEcCC---C
Q 016185 22 EYRVTNKLQEGKRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYV-DEDKEESFYTVSWACNVD---G 97 (394)
Q Consensus 22 ~~~~~~~~~~h~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~---~ 97 (394)
.++......+ -.....|+|.| +|+++++-..+.|.+++ .+++ ..+.... ..........+++. |+ +
T Consensus 18 ~~~~~~va~~-l~~P~~ia~~p----dG~l~V~e~~g~I~~~d-~~G~--~~~~~~~v~~~g~~g~~gia~~--pdf~~~ 87 (354)
T 3a9g_A 18 KFKISEVASD-LEVPWSIAPLG----GGRYLVTERPGRLVLIS-PSGK--KLVASFDVANVGEAGLLGLALH--PEFPKK 87 (354)
T ss_dssp CEEEEEEECS-CSCEEEEEEEE----TTEEEEEETTTEEEEEC-SSCE--EEEEECCCCCSTTCSEEEEEEC--TTTTTS
T ss_pred CeEEEEEeCC-CCCCeEEEEcC----CCeEEEEeCCCEEEEEe-CCCc--eEeeccceeecCCCceeeEEeC--CCCCcC
Confidence 3444433333 34578999999 78888887665588887 4454 2222111 01123456667766 76 3
Q ss_pred CcEEEEeec----C----CeEEEEECCCC--e-----eE-EEEEe-cCCceeEEEEcCCCCcEEEEce
Q 016185 98 IPFLVAGGI----N----GIIRVIDVSNE--K-----LH-KSFVG-HGDSINEIRTQPLKPSLVVSAS 148 (394)
Q Consensus 98 ~~~l~s~~~----d----g~i~vwd~~~~--~-----~~-~~~~~-~~~~v~~~~~~~~~~~~l~s~~ 148 (394)
. .|+.+.. + +.|..|+.... . .+ ..+.. .......|.|.| ++.++++.+
T Consensus 88 g-~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G 153 (354)
T 3a9g_A 88 S-WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTG 153 (354)
T ss_dssp C-EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECC
T ss_pred C-EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEEC
Confidence 3 3443332 3 57777876643 1 11 11221 111346799999 666666644
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.42 E-value=0.89 Score=45.40 Aligned_cols=138 Identities=9% Similarity=0.046 Sum_probs=79.1
Q ss_pred CCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEE-EecCCceeEEE
Q 016185 57 GNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSF-VGHGDSINEIR 135 (394)
Q Consensus 57 ~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~v~~~~ 135 (394)
..+|++.+......+..+.. .....|...+.. +. +++.+. ++.+.++++.+++....- ..-...|.|++
T Consensus 491 ~~~Irli~~~~~~~~~~w~~----p~~~~I~~As~n----~~-~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~ 560 (1158)
T 3ei3_A 491 SASVRLVSQEPKALVSEWKE----PQAKNISVASCN----SS-QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLD 560 (1158)
T ss_dssp SSCEEEEESSSCCEEEEECC----TTCCCCCEEEEC----SS-EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEE
T ss_pred cCEEEEEECCCCeEEEEEEC----CCCCEEEEEEeC----CC-EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEE
Confidence 34466677554444444431 123345554432 33 455554 678888887765432211 12356799999
Q ss_pred EcCCC-----CcEEEEce-eeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecC
Q 016185 136 TQPLK-----PSLVVSAS-KVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHP 209 (394)
Q Consensus 136 ~~~~~-----~~~l~s~~-~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 209 (394)
+.|.. ..+++.|. . |++++|+++.+-+.+..... +......++.+..
T Consensus 561 i~~~~~~~~~s~~~aVg~~~-------------------------d~tv~I~sL~~l~~~~~~~L--~~~~~p~si~l~~ 613 (1158)
T 3ei3_A 561 ITPLGDSNGLSPLCAIGLWT-------------------------DISARILKLPSFELLHKEML--GGEIIPRSILMTT 613 (1158)
T ss_dssp CCCCSSSTTCCSEEEEEETT-------------------------TTEEEEEETTTCCEEEEEEC--CSSCCEEEEEEEE
T ss_pred eecCCCCcccccEEEEEECC-------------------------CCEEEEEECCCCCeEEEEEC--CCCCCCcEEEEEE
Confidence 87632 24565555 4 89999999987666544331 1122334444332
Q ss_pred -CCCeeEEeeccCCcEEEEEccc
Q 016185 210 -SDIYRIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 210 -~~~~~l~s~~~dg~v~iwd~~~ 231 (394)
....+|..|-.||.+..+.+..
T Consensus 614 ~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 614 FESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp ETTEEEEEEEETTSEEEEEEECT
T ss_pred eCCCcEEEEEeCCCeEEEEEEcC
Confidence 1456788888999987776653
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.18 E-value=0.55 Score=40.67 Aligned_cols=241 Identities=12% Similarity=0.091 Sum_probs=139.2
Q ss_pred cceEEEEecCCcEEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEeecCCeEEEEECCC-CeeEEEEEe
Q 016185 48 YFNVFATVGGNRVTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGGINGIIRVIDVSN-EKLHKSFVG 126 (394)
Q Consensus 48 ~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~ 126 (394)
..+.+|--....+.|||+.+.+.++... ..++|.--.|- .+. .|+-.. +..|+-|++.. ..+.+.+..
T Consensus 76 ~~~iiALrag~~lQiFnle~K~klks~~------~~e~VvfWkWi--s~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 76 ASKVIALKAGKTLQIFNIEMKSKMKAHT------MTDDVTFWKWI--SLN--TVALVT-DNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp SSSCEEEEETTEEEEEETTTTEEEEEEE------CSSCCCEEEEE--ETT--EEEEEC-SSEEEEEESSSSCCCEEEEEC
T ss_pred CCcEEEEecCCeEEEEchHHhhhhccee------cCCCceEEEec--CCC--eEEEEc-CCeeEEecccCCCCchhheec
Confidence 4567777665559999999988887776 33455555665 444 344443 35799999974 467777776
Q ss_pred cC----CceeEEEEcCCCCcEEE-EceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCccc
Q 016185 127 HG----DSINEIRTQPLKPSLVV-SASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNE 201 (394)
Q Consensus 127 ~~----~~v~~~~~~~~~~~~l~-s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 201 (394)
|. ..|..-..++ +.+.++ +|-. ..++ .-.|.+.+|..+.+. .+.+. +|...
T Consensus 145 ~~~L~~~QIInY~~d~-~~kW~~l~GI~--------------~~~~-----~v~G~mQLYS~er~~-sQ~ie---Ghaa~ 200 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDA-KQKWLLLTGIS--------------AQQN-----RVVGAMQLYSVDRKV-SQPIE---GHAAS 200 (494)
T ss_dssp CGGGTTCEEEEEEECT-TSSEEEEEEEE--------------EETT-----EEEEEEEEEESTTCC-EEEEC---CSEEE
T ss_pred chhcccceEEEEEECC-CCCeEEEEeec--------------ccCC-----cccceEEEeeccccc-cchhe---eeeee
Confidence 53 3566666777 444444 3321 0011 116889999986543 44555 78766
Q ss_pred EEEEEecC--CCCeeEEeeccC---CcEEEEEccccceeeccccccCCCCCCCCccccccceeee---ecCCCceEEEEE
Q 016185 202 VLSVDFHP--SDIYRIASCGMD---NTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIA---SVHSNYVDCNRW 273 (394)
Q Consensus 202 i~~~~~~~--~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~ 273 (394)
...+.+.- ....+|+.+... +++++.++...... ...+. .+.+... ..-.+.-.++..
T Consensus 201 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~----------~~~f~----kk~vdv~fppe~~~DFPvamqv 266 (494)
T 1bpo_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG----------NQPFP----KKAVDVFFPPEAQNDFPVAMQI 266 (494)
T ss_dssp EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTT----------CCCCC----CEEEECCCCTTSTTCCEEEEEE
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccC----------CCCcc----ceeeeeeCCcccccCceeEEEe
Confidence 66555542 112344444332 78999888652100 00000 0111100 112333455566
Q ss_pred e--CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCC
Q 016185 274 L--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSS 348 (394)
Q Consensus 274 ~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 348 (394)
+ -..+..-+.-|.|.+||++++. ++..-+....+|...+...... =++.....|.|.--.++..
T Consensus 267 s~kygviyviTK~G~i~lyDleTgt---------~i~~nrIs~~~iF~t~~~~~~~--Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 267 SEKHDVVFLITKYGYIHLYDLETGT---------CIYMNRISGETIFVTAPHEATA--GIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp ETTTTEEEEEETTSEEEEEETTTCC---------EEEEEECCSSCEEEEEEETTTT--EEEEEETTCEEEEEEECTT
T ss_pred cccCCEEEEEecCceEEEEecccce---------eeeeecccCCceEEecccCCCC--cEEEEccCceEEEEEEccc
Confidence 5 4467777889999999999987 5555555555665544444432 3555557777776666554
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.16 E-value=0.94 Score=43.12 Aligned_cols=277 Identities=6% Similarity=-0.068 Sum_probs=136.7
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCce--eEEeeecc--cCCcccceEEEEEEEcCCCCcEEEEeecCCe
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGV--IAALQSYV--DEDKEESFYTVSWACNVDGIPFLVAGGINGI 109 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~--~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~l~s~~~dg~ 109 (394)
..|.++.-.. +|.+.+.. .+++..++..++.. ...+.... ..-....|.++.- +.+|. |..|. ++-
T Consensus 324 ~~v~~i~~D~----~g~lWiGt-~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~--d~~g~--lWigt-~~G 393 (758)
T 3ott_A 324 NQFYSLFRDS----KGFYWFGG-ANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYE--DKEQQ--LWIAT-DGS 393 (758)
T ss_dssp CBEEEEEECT----TCCEEEEE-TTEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEE--CTTSC--EEEEE-TTE
T ss_pred ceEEEEEEcC----CCCEEEee-CCcceeecccccccceeEEeccCCcCCCCCCCceEEEEE--CCCCC--EEEEe-CCc
Confidence 3577766543 57776665 46777787655321 11221100 0011234655543 47776 55555 456
Q ss_pred EEEEECCCCeeEEEEE-e-----cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEe
Q 016185 110 IRVIDVSNEKLHKSFV-G-----HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183 (394)
Q Consensus 110 i~vwd~~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~ 183 (394)
+..+|..+++...-.. . ....|.++...+ ++ .|..|+. .+-|.++|.
T Consensus 394 L~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~-~g-~lWigT~-------------------------~~Gl~~~~~ 446 (758)
T 3ott_A 394 INRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDT-AG-QLWISTC-------------------------LGGIFVVDK 446 (758)
T ss_dssp EEEEETTTTEEEEEEEECCC--CBSSSEEEEEECT-TS-EEEEEES-------------------------SSCEEEEEH
T ss_pred HhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcC-CC-CEEEEEC-------------------------CCceEEEcc
Confidence 8899988775433211 1 123466666554 33 3444554 667888886
Q ss_pred cCC-----cEE---EEeeccCC-CcccEEEEEecCCCCeeEEe-eccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 184 QTG-----ICI---LIFAGAGG-HRNEVLSVDFHPSDIYRIAS-CGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 184 ~~~-----~~~---~~~~~~~~-~~~~i~~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
.+. ... ..+....+ ....|.++...+ ++.+-+. ++. +-+..+|..+.+..... . .
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~-~Gl~~~d~~~~~~~~~~-----~--~------ 511 (758)
T 3ott_A 447 HKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNN-KGIDKINPRTREVTKLF-----A--D------ 511 (758)
T ss_dssp HHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTC-SSEEEEETTTTEEEEEC-----T--T------
T ss_pred ccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCC-CCcEEEeCCCCceEEec-----C--C------
Confidence 531 111 12211001 223589999887 7775542 444 44888888763211000 0 0
Q ss_pred cccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEE
Q 016185 254 VQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAA 332 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 332 (394)
.. .....+.++..+ ...+..|+..| +..||..+.+... ...-......|.++... ++ .|.
T Consensus 512 ------~~-~~~~~~~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~-------~~~~gl~~~~i~~i~~~-~g---~lW 572 (758)
T 3ott_A 512 ------EL-TGEKSPNYLLCDEDGLLWVGFHGG-VMRINPKDESQQS-------ISFGSFSNNEILSMTCV-KN---SIW 572 (758)
T ss_dssp ------TS-CGGGCEEEEEECTTSCEEEEETTE-EEEECC--CCCCB-------CCCCC---CCEEEEEEE-TT---EEE
T ss_pred ------Cc-CCCcccceEEECCCCCEEEEecCc-eEEEecCCCceEE-------ecccCCCccceEEEEEC-CC---CEE
Confidence 00 012345666665 33444455544 8888876654211 10001123457777653 44 466
Q ss_pred EEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEec-cCCCEEEEeccCCeEEE
Q 016185 333 IGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMS-YDGSTILSCCEDGAIWR 388 (394)
Q Consensus 333 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~s~~~dg~i~i 388 (394)
.++..| |..+|..+.+ ...+.. ....+....+. ++| .|..|+.+|.+++
T Consensus 573 i~t~~G-l~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~G-~l~fG~~~Gl~~f 622 (758)
T 3ott_A 573 VSTTNG-LWIIDRKTMD---ARQQNM--TNKRFTSLLFDPKED-CVYLGGADGFGIS 622 (758)
T ss_dssp EEESSC-EEEEETTTCC---EEEC----CCCCCSEEEEETTTT-EEEEECBSEEEEE
T ss_pred EECCCC-eEEEcCCCce---eEEecC--CCCceeeeEEECCCC-cEEEecCCceEEE
Confidence 666665 7788887653 222221 11233344444 454 5666677775543
No 329
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.06 E-value=0.57 Score=39.73 Aligned_cols=158 Identities=9% Similarity=0.049 Sum_probs=87.5
Q ss_pred cceeEEEEEeeCCCcceEEEEecC--Cc-EEEEEcCCCc-eeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee----
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGG--NR-VTVYQCLEGG-VIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG---- 105 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~--d~-i~vw~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~---- 105 (394)
-....|.+.++.+....++++-.. +. |.+|++..+. ....+..+.. ..-...+.+.+. ++|. +.++..
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~--~~G~-fyvt~~~~ft 187 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAV--GPEH-FYATNDHYFI 187 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEE--ETTE-EEEEESCSCS
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEe--CCCC-EEecCCcEeC
Confidence 467778877631112345555443 23 8888876543 3333333322 234456777777 8887 666643
Q ss_pred -------------cCCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeee
Q 016185 106 -------------INGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRV 172 (394)
Q Consensus 106 -------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~ 172 (394)
..|.|.-+|. ++.. .+...-..-+.++|+|++..++++-+.
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d~--~~~~-~~~~~l~~pNGia~spDg~~lYvadt~----------------------- 241 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYSP--NDVR-VVAEGFDFANGINISPDGKYVYIAELL----------------------- 241 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEECT--TCCE-EEEEEESSEEEEEECTTSSEEEEEEGG-----------------------
T ss_pred CcccccchhhccCCccEEEEEEC--CeEE-EeecCCcccCcceECCCCCEEEEEeCC-----------------------
Confidence 1245555554 3333 333333456899999944455555556
Q ss_pred ccCCcEEEEEecC-CcE--EEEeeccCCCcccEEEEEecCCC-CeeEEeeccC-CcEEEEE
Q 016185 173 GQDESVRLWNVQT-GIC--ILIFAGAGGHRNEVLSVDFHPSD-IYRIASCGMD-NTVKIWS 228 (394)
Q Consensus 173 ~~d~~i~vwd~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~~-~~~l~s~~~d-g~v~iwd 228 (394)
.+.|..|++.. ++. .+.+. .....-.+++++ + |++.+++..+ +.|..|+
T Consensus 242 --~~~I~~~~~~~~g~l~~~~~~~----~~g~PDGi~vD~-e~G~lwva~~~~g~~v~~~~ 295 (355)
T 3sre_A 242 --AHKIHVYEKHANWTLTPLRVLS----FDTLVDNISVDP-VTGDLWVGCHPNGMRIFFYD 295 (355)
T ss_dssp --GTEEEEEEECTTSCEEEEEEEE----CSSEEEEEEECT-TTCCEEEEEESCHHHHHSCC
T ss_pred --CCeEEEEEECCCCcEecCEEEe----CCCCCceEEEeC-CCCcEEEEecCCceEEEEEC
Confidence 78999999864 332 12232 235566788876 4 6766655433 3444443
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.02 E-value=1 Score=42.33 Aligned_cols=189 Identities=9% Similarity=0.007 Sum_probs=92.8
Q ss_pred CcEEEEEecCCcEEEEe-ec----cCCCcccEEEEEecCCCCeeEEeeccCC------cEEEEEccccceeeccccccCC
Q 016185 176 ESVRLWNVQTGICILIF-AG----AGGHRNEVLSVDFHPSDIYRIASCGMDN------TVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~-~~----~~~~~~~i~~~~~~~~~~~~l~s~~~dg------~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
..+.+||..+++....- .. .......-..+.+.. ++.+++.|+.++ .+.+||+.+.. |..
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd~~t~~--------W~~ 482 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFDMKTRE--------WSM 482 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEETTTTE--------EEE
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEeCCCCc--------EEE
Confidence 46889999887654433 10 001112223344432 456777777543 47788887732 111
Q ss_pred CCCCCCccccccceeeeecCCCceEEEEE-eCcEEEEeecCC--eEEEecCCCCCCCCCCCcceecccccCCCCCeEEEE
Q 016185 245 LPSKFPTKYVQFPVFIASVHSNYVDCNRW-LGDFILSKSVDN--EIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIK 321 (394)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 321 (394)
.+ .+......-.++.+ .+.+++.|+.++ .+.+||..+..-.... .....+.......++.
T Consensus 483 ~~-------------~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~----~~g~~p~~r~~~~a~v 545 (695)
T 2zwa_A 483 IK-------------SLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT----PKDEFFQNSLVSAGLE 545 (695)
T ss_dssp CC-------------CCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC----CSSGGGGSCCBSCEEE
T ss_pred CC-------------CCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc----CCCCCCCcccceeEEE
Confidence 11 01111111122332 477777777654 6899998876421100 0000111222223344
Q ss_pred EeecCCcceEEEEeC--C-----CcEEEEEecCCC------ceeeEEeccCCccCCeeEEEeccCCCEEEEeccC-----
Q 016185 322 FSCDFHYNAAAIGNR--E-----GKIFVWELQSSP------PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED----- 383 (394)
Q Consensus 322 ~~~~~~~~~l~~~~~--d-----g~i~iwd~~~~~------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----- 383 (394)
+..+.. .+++.|+. + +.+.+||+.+.. ...+....... .... +++...++++++.||.+
T Consensus 546 ~~~~~~-~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~-R~~~-~~~~~~~~~iyv~GG~~~~~~~ 622 (695)
T 2zwa_A 546 FDPVSK-QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ-RYGS-QIKYITPRKLLIVGGTSPSGLF 622 (695)
T ss_dssp EETTTT-EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC-CBSC-EEEEEETTEEEEECCBCSSCCC
T ss_pred EeCCCC-EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC-cccc-eEEEeCCCEEEEECCccCCCCC
Confidence 444412 57777765 2 458899998876 22222221001 1111 22333337777888743
Q ss_pred ---CeEEEEEcCC
Q 016185 384 ---GAIWRWDAIP 393 (394)
Q Consensus 384 ---g~i~iwd~~~ 393 (394)
..+.+||+.+
T Consensus 623 ~~~~~v~~yd~~t 635 (695)
T 2zwa_A 623 DRTNSIISLDPLS 635 (695)
T ss_dssp CTTTSEEEEETTT
T ss_pred CCCCeEEEEECCC
Confidence 4588998865
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.01 E-value=0.22 Score=38.71 Aligned_cols=156 Identities=8% Similarity=-0.048 Sum_probs=77.8
Q ss_pred ccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeee-cCCCceEEEEEe--Cc
Q 016185 200 NEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIAS-VHSNYVDCNRWL--GD 276 (394)
Q Consensus 200 ~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~--~~ 276 (394)
..+..++|+| ++.+.++ .+|.+.-.+..+.... .| .......-. +.. .-.++.|+ |.
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~-----~W-----------~~s~t~IG~~Gw~-~F~a~~fD~~G~ 100 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDND-----NW-----------MGRAKKIGNGGWN-QFQFLFFDPNGY 100 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTC-----CH-----------HHHCEEEECSCGG-GCSEEEECTTSC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcc-----cc-----------cccccEecccccc-cceEEEECCCCC
Confidence 4677999999 9886666 6787666665441100 00 000000000 111 13567777 44
Q ss_pred EEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc-e---e
Q 016185 277 FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP-V---L 352 (394)
Q Consensus 277 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~---~ 352 (394)
+.++ .||.|.-++..+............+.. .--..+..+.|.|++ .|.+.. |+.++-.....+.. . .
T Consensus 101 LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~--~gw~~~~~lff~p~G---~Lyav~-dg~lyr~~~P~~~~~~wl~~ 172 (236)
T 1tl2_A 101 LYAV--SKDKLYKASPPQSDTDNWIARATEVGS--GGWSGFKFLFFHPNG---YLYAVH-GQQFYKALPPVSNQDNWLAR 172 (236)
T ss_dssp EEEE--ETTEEEEESCCCSTTCCHHHHSEEEEC--SSGGGEEEEEECTTS---CEEEEE-TTEEEEECCCSSTTCCHHHH
T ss_pred EEEe--CCCEEEEeCCCcCCCCceeccccEecc--CCCCceEEEEECCCc---eEEEEe-CCcEEecCCCCCCCcccccc
Confidence 4444 679998888654332111111111111 111357899999999 344445 78754322221110 0 0
Q ss_pred eEEeccCCccCCeeEEEeccCCCEEEEeccCCeE
Q 016185 353 IARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 386 (394)
Q Consensus 353 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 386 (394)
...+- ...-.....+.|.+++.+.++. +|.+
T Consensus 173 ~~~~g-~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 173 ATKIG-QGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp CEEEE-SSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred cceec-cCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 11111 1222344557799999887776 6644
No 332
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.68 E-value=0.84 Score=38.69 Aligned_cols=172 Identities=12% Similarity=0.070 Sum_probs=86.6
Q ss_pred cCCeEEEEECCCC--ee-EEEEEe-----cCCceeEEEEcCC--CCcEEEEceeeeEEeeccceeeeeeeccceeeeccC
Q 016185 106 INGIIRVIDVSNE--KL-HKSFVG-----HGDSINEIRTQPL--KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 106 ~dg~i~vwd~~~~--~~-~~~~~~-----~~~~v~~~~~~~~--~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
.+|.|.++|.++. +. ...+.+ .......+.+.++ +...|+.+.. ...+
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh----------------------~~~~ 138 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNH----------------------PGSS 138 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEEC----------------------STTC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEEC----------------------CCCC
Confidence 6899999998742 22 112222 1224566666552 2223443332 0124
Q ss_pred CcEEEEEecCC-cEEEEeeccCC-CcccEEEEEecCCCCeeEEeecc-----------------CCcEEEEEccccceee
Q 016185 176 ESVRLWNVQTG-ICILIFAGAGG-HRNEVLSVDFHPSDIYRIASCGM-----------------DNTVKIWSMKEFWTYV 236 (394)
Q Consensus 176 ~~i~vwd~~~~-~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~-----------------dg~v~iwd~~~~~~~~ 236 (394)
..|.+|+++.+ .....+....+ .-...+.+.+.+ ++.+.++... .|.|..+|...
T Consensus 139 s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~----- 212 (355)
T 3sre_A 139 STVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND----- 212 (355)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-----
T ss_pred CeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-----
Confidence 67888887754 22222221112 234678999998 8886666431 13333333211
Q ss_pred ccccccCCCCCCCCccccccceeeeecCCCceEEEEEe--CcEEEE-eecCCeEEEecCCCCCCCCCCCcceecccccCC
Q 016185 237 EKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL--GDFILS-KSVDNEIVLWEPKMKEQSPGEGTADILQKYPVP 313 (394)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 313 (394)
+..+...-..-..++|+ ++.++. -+..+.|..|++..... ....+.+..
T Consensus 213 ---------------------~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~------l~~~~~~~~- 264 (355)
T 3sre_A 213 ---------------------VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT------LTPLRVLSF- 264 (355)
T ss_dssp ---------------------CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC------EEEEEEEEC-
T ss_pred ---------------------EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc------EecCEEEeC-
Confidence 11222222345678887 555554 45678999999874211 111112211
Q ss_pred CCCeEEEEEee-cCCcceEEEEe
Q 016185 314 ECDIWFIKFSC-DFHYNAAAIGN 335 (394)
Q Consensus 314 ~~~i~~~~~~~-~~~~~~l~~~~ 335 (394)
....-.+++.+ +| ++.+++.
T Consensus 265 ~g~PDGi~vD~e~G--~lwva~~ 285 (355)
T 3sre_A 265 DTLVDNISVDPVTG--DLWVGCH 285 (355)
T ss_dssp SSEEEEEEECTTTC--CEEEEEE
T ss_pred CCCCceEEEeCCCC--cEEEEec
Confidence 23456778887 47 3444443
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.66 E-value=0.57 Score=47.10 Aligned_cols=220 Identities=15% Similarity=0.169 Sum_probs=120.7
Q ss_pred CCeEEEEECCCCeeEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC
Q 016185 107 NGIIRVIDVSNEKLHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG 186 (394)
Q Consensus 107 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~ 186 (394)
...|.|-|+.++..+.... -..-+.-.+| ..+.++--. ..++.|+|+++.
T Consensus 47 ~~~vvIidl~~~~~~~rrp---i~AdsAIMnP-~~~iiALra--------------------------g~~lQiFnl~~k 96 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNP-ASKVIALKA--------------------------GKTLQIFNIEMK 96 (1630)
T ss_pred CceEEEEECCCCCCccccc---ccchhhccCC-CcceEEEec--------------------------CCeEEEeehHHh
Confidence 3478888887755432111 0112333567 445555543 679999999998
Q ss_pred cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecC--
Q 016185 187 ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVH-- 264 (394)
Q Consensus 187 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 264 (394)
+.+..+. ...+|.-=.|-. .+.|+-.+ +..|.-|++.... .|...+.-|
T Consensus 97 ~klks~~----~~e~VvfWkWis--~~~l~lVT-~~aVyHW~~~~~s----------------------~P~k~fdR~~~ 147 (1630)
T 1xi4_A 97 SKMKAHT----MTDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGES----------------------QPVKMFDRHSS 147 (1630)
T ss_pred hhhcccc----cCCCceEEEecC--CCeeEEEc-CCeEEEeccCCCC----------------------ccHHHHhcchh
Confidence 8887776 455676666763 34444444 4579999996511 122222222
Q ss_pred --CCceEEEEEe--CcEEEEe-------ecCCeEEEecCCCCCCCCCCCcceecccccCC--CCCeEEEEEeecCCcceE
Q 016185 265 --SNYVDCNRWL--GDFILSK-------SVDNEIVLWEPKMKEQSPGEGTADILQKYPVP--ECDIWFIKFSCDFHYNAA 331 (394)
Q Consensus 265 --~~~i~~~~~~--~~~l~~~-------~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~l 331 (394)
...|..-..+ .++++.. ...|.+.+|..+........++......+... ..+..-++|.....
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~---- 223 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ---- 223 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecC----
Confidence 2223333333 3333322 24688999998877543333333322222221 11112222222221
Q ss_pred EEEeCCCcEEEEEecCC---Cceee---E--EeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcCC
Q 016185 332 AIGNREGKIFVWELQSS---PPVLI---A--RLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAIP 393 (394)
Q Consensus 332 ~~~~~dg~i~iwd~~~~---~~~~~---~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 393 (394)
..+.++|-++... .+... . .++...-.....++..++....+..-+.-|.|+++|+.+
T Consensus 224 ----~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 224 ----AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred ----CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEeccc
Confidence 1268899888543 11111 1 111112345566788888888888888999999999976
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.63 E-value=0.9 Score=38.62 Aligned_cols=74 Identities=11% Similarity=0.034 Sum_probs=45.0
Q ss_pred CCeEEEEEeecC-----CcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEec-cCCeEEE
Q 016185 315 CDIWFIKFSCDF-----HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCC-EDGAIWR 388 (394)
Q Consensus 315 ~~i~~~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~i 388 (394)
.....+.|.... +..++++....+.|...++..++......+- ......+..+++.|||.++++.. .+|. |
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~rp~~v~~~pdG~lyv~td~~~g~--I 347 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRIL-TDRGQRIRDVRTGPDGYLYVLTDESSGE--L 347 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEES-GGGCCCEEEEEECTTSCEEEEECSTTEE--E
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcc-cCCCCceeEEEECCCCcEEEEEeCCCCE--E
Confidence 356778887432 1256777777888888888764321122221 12235799999999998766543 4554 4
Q ss_pred EEc
Q 016185 389 WDA 391 (394)
Q Consensus 389 wd~ 391 (394)
|.+
T Consensus 348 ~ri 350 (353)
T 2g8s_A 348 LKV 350 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.58 E-value=0.89 Score=38.22 Aligned_cols=113 Identities=12% Similarity=0.062 Sum_probs=69.5
Q ss_pred EEEEeecCCeEEEEECCCCeeEEEEEec-CCceeEEEEc--CCCCcEEEEc-eeeeEEeeccceeeeeeeccceeeeccC
Q 016185 100 FLVAGGINGIIRVIDVSNEKLHKSFVGH-GDSINEIRTQ--PLKPSLVVSA-SKVIIISSLSLICLLLFIRSNCLRVGQD 175 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~~l~s~-~~~i~~~~~~~~~~~~~~~~~~~~~~~d 175 (394)
+++.++.||.|.-+|..+|+...+++.. ..++....-. +.++..++.. .. |
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~-------------------------d 66 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFG-------------------------D 66 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCST-------------------------T
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECC-------------------------C
Confidence 7899999999999999999999998754 1222221100 1122333332 34 9
Q ss_pred CcEEEEEecCCcEEEEeeccC-CCcccEEEEEecC-C-------CCeeEEeeccCCcEEEEEccccceeecc
Q 016185 176 ESVRLWNVQTGICILIFAGAG-GHRNEVLSVDFHP-S-------DIYRIASCGMDNTVKIWSMKEFWTYVEK 238 (394)
Q Consensus 176 ~~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~-------~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 238 (394)
|.|..++..+|.....+.... -...++.. .-.| - .+..+++|+.+|.+...|+++++..-+.
T Consensus 67 G~l~a~~~~~G~~~~~~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 67 GNIYYFNAHQGLQKLPLSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp TEEEEEETTTEEEEEEEEHHHHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCcEEeeeccccceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 999999988886554443110 01112221 1000 0 3456899999999999999997765443
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.055 Score=45.51 Aligned_cols=117 Identities=9% Similarity=0.020 Sum_probs=64.4
Q ss_pred ccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEec--CCCCeeEEee-ccCCcEEEEEccccceeecccccc
Q 016185 166 RSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFH--PSDIYRIASC-GMDNTVKIWSMKEFWTYVEKSFTW 242 (394)
Q Consensus 166 ~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~ 242 (394)
.+.+++++.||.|.-.|..+|+....+... ...++....-. +.++..++.. +.||.|..++..++.........
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~- 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR- 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH-
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc-
Confidence 345666666999999999999999988731 11233222111 1133444443 68999999998875432211100
Q ss_pred CCCCCCCCccccccceeeeecCCCceE-EE-E-EeCcEEEEeecCCeEEEecCCCCC
Q 016185 243 TDLPSKFPTKYVQFPVFIASVHSNYVD-CN-R-WLGDFILSKSVDNEIVLWEPKMKE 296 (394)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~-~-~~~~~l~~~~~dg~i~~~d~~~~~ 296 (394)
.. ....|+ .....+|. .. . -.+..+++++.+|++...|+++++
T Consensus 87 -~l-------v~~SP~---~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 87 -QL-------VSTSPL---HLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp -HH-------HTTCSE---EEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred -cc-------eecccc---ccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 00 000000 00001110 00 0 026788999999999999999987
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.21 E-value=2.1 Score=40.26 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=30.0
Q ss_pred cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCC--cEEEEEcccc
Q 016185 177 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDN--TVKIWSMKEF 232 (394)
Q Consensus 177 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~ 232 (394)
.+.+||..+.+-...-... ..... .+.+... ++.+++.|+.++ .+.+||+.+.
T Consensus 469 dv~~yd~~t~~W~~~~~~p-~~R~~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~ 523 (695)
T 2zwa_A 469 DNWIFDMKTREWSMIKSLS-HTRFR-HSACSLP-DGNVLILGGVTEGPAMLLYNVTEE 523 (695)
T ss_dssp CCEEEETTTTEEEECCCCS-BCCBS-CEEEECT-TSCEEEECCBCSSCSEEEEETTTT
T ss_pred cEEEEeCCCCcEEECCCCC-CCccc-ceEEEEc-CCEEEEECCCCCCCCEEEEECCCC
Confidence 5788898876543321110 11111 2233323 677888887655 6888998873
No 338
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.17 E-value=1.4 Score=38.10 Aligned_cols=119 Identities=19% Similarity=0.198 Sum_probs=75.4
Q ss_pred ceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCC-C---cceecccccC------CCCCeEEEEEeecCC-cceEEE
Q 016185 267 YVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGE-G---TADILQKYPV------PECDIWFIKFSCDFH-YNAAAI 333 (394)
Q Consensus 267 ~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~-~---~~~~~~~~~~------~~~~i~~~~~~~~~~-~~~l~~ 333 (394)
.|..+..+ |++++.. .+..|.|-.+..+...... . ..+ .+.+.. ...+|..+.|+|-+. ...|++
T Consensus 67 ~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q-~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQ-IFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTE-EEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCcccccccccc-eeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 35556665 7777775 5668888888744321111 0 011 111111 357899999999764 258999
Q ss_pred EeCCCcEEEEEecCCCceeeEEec-------cCCccCCeeEEEeccCCCEEEE--eccCCeEEE
Q 016185 334 GNREGKIFVWELQSSPPVLIARLS-------HAQSKSPIRQTAMSYDGSTILS--CCEDGAIWR 388 (394)
Q Consensus 334 ~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~v~~~~~s~~~~~l~s--~~~dg~i~i 388 (394)
-..|+.|++||+........ .+. .......|.+++|.+++-.|.. .+..|.|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999986432222 222 1123367899999998876666 447787763
No 339
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.12 E-value=2 Score=35.11 Aligned_cols=165 Identities=14% Similarity=0.099 Sum_probs=85.2
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYV 254 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (394)
||.|..|-......+-. . ..-...|..++... ... ++. . ||.|..|-.....+.
T Consensus 80 ~G~v~~wG~n~~Gqlg~-P--~~~~~~v~~ia~G~-~hs-~al-~-~G~v~~wG~n~~gql------------------- 133 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTV-P--AEARSGVDAIAAGA-WAS-YAL-K-DGKVIAWGDDSDGQT------------------- 133 (282)
T ss_dssp TTEEEEEECCTTSTTCC-C--GGGSSSEEEEEEET-TEE-EEE-E-TTEEEEEECCTTSTT-------------------
T ss_pred CCEEEEeeCCCCCCCCC-C--cccCCCeEEEECcC-CEE-EEE-e-CCeEEEecCCCCCcC-------------------
Confidence 78888887543211110 1 01234688888764 333 333 3 899999976652110
Q ss_pred ccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEE
Q 016185 255 QFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIG 334 (394)
Q Consensus 255 ~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~ 334 (394)
..+. .....|..++......+.-. ||.+..|-.....+.. . +. .....|..++..... .++.
T Consensus 134 g~~~----~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg---~--p~----~~~~~v~~i~~G~~h---s~al- 195 (282)
T 3qhy_B 134 TVPA----EAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTT---V--PA----EAQSGVDDVAGGIFH---SLAL- 195 (282)
T ss_dssp SCCG----GGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTS---C--CG----GGGSSEEEEEECSSE---EEEE-
T ss_pred CCCc----cCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCC---C--ce----ecCCCeEEEEecCCE---EEEE-
Confidence 0000 11233555555444444444 8999999766543211 0 00 012346666554433 4454
Q ss_pred eCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 335 NREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 335 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
.||.|+.|=.......- ... .....|..++...... ++.. ||.|+.|--
T Consensus 196 -~~G~v~~wG~n~~gqlg-~p~---~~~~~v~~i~~G~~h~-~al~--~g~v~~wG~ 244 (282)
T 3qhy_B 196 -KDGKVIAWGDNRYKQTT-VPT---EALSGVSAIASGEWYS-LALK--NGKVIAWGS 244 (282)
T ss_dssp -ETTEEEEEECCTTSTTC-CCG---GGGSSCCEEEECSSCE-EEEE--TTEEEEEST
T ss_pred -ECCeEEEEECCCCCCCC-CCc---ccCCCceEEEcCCCEE-EEEE--CCEEEEecC
Confidence 59999999766532111 111 1124577777655433 3333 889998853
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.72 E-value=2.8 Score=35.39 Aligned_cols=61 Identities=15% Similarity=0.023 Sum_probs=38.3
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc--eeeEEeccCCccCCeeEEEeccCCCEEEEec
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIRQTAMSYDGSTILSCC 381 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 381 (394)
....++|.. + .++...-..+.|....+..... .....+. +....+.+++..|||.++++.+
T Consensus 264 ap~G~~~~~-g--~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~--~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 264 SPSGIAYAE-G--SVWMAGLRGERLWRIPLKGTAAAADPQAFLE--GEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CEEEEEEET-T--EEEEEESTTCSEEEEEEETTEESSCCEEEST--TTSSCEEEEEEEETTEEEEEEC
T ss_pred CCcceEEEc-C--ceeeccccCCEEEEEEecCCceecceEEeec--CCCCCccEEEECCCCcEEEEEc
Confidence 456777763 3 4566666667777777765421 1122222 3447899999999998777643
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.35 E-value=4.4 Score=36.51 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=63.8
Q ss_pred EEEEecCCc-EEEEEcCCCceeEEeeecccCCc--------------------ccceEEEEEEEc---CCCCcEEEEee-
Q 016185 51 VFATVGGNR-VTVYQCLEGGVIAALQSYVDEDK--------------------EESFYTVSWACN---VDGIPFLVAGG- 105 (394)
Q Consensus 51 ~las~~~d~-i~vw~~~~~~~~~~~~~~~~~~~--------------------~~~v~~~~~~~~---~~~~~~l~s~~- 105 (394)
.|.||+..+ |+|+-+.+++.+..+..|....- .+......+++. -||+ +|+.-.
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGr-ylfiNdk 150 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGK-YLFINDK 150 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEE-EEEEEET
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeE-EEEEecC
Confidence 366666666 99999999999988887653311 111222233322 2677 565554
Q ss_pred cCCeEEEEECCCCeeEEEEEe-cCCceeEEEEc--CCCCcEEEEcee
Q 016185 106 INGIIRVIDVSNEKLHKSFVG-HGDSINEIRTQ--PLKPSLVVSASK 149 (394)
Q Consensus 106 ~dg~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~~l~s~~~ 149 (394)
.+.+|..-++...++-+.+.- ....+..++|. | +..+++.++.
T Consensus 151 an~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p-~T~yv~~~~e 196 (638)
T 3sbq_A 151 ANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVP-HTKYVFANAE 196 (638)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSS-BCCEEEEEEC
T ss_pred CCcceEEEECCcEeeceeEeCCCCcCcccccccccC-CccEEEecce
Confidence 677888889998887766652 45678888886 6 5567777665
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.04 E-value=3.7 Score=34.79 Aligned_cols=106 Identities=14% Similarity=0.096 Sum_probs=54.9
Q ss_pred cceeEEEEEeeCCCcce-EEEEecCCcEEEEEcCCCceeEEeeecc--cCCcccceEEEEEEEcCC----CCcEEEEeec
Q 016185 34 RPLYAVVFNFIDSRYFN-VFATVGGNRVTVYQCLEGGVIAALQSYV--DEDKEESFYTVSWACNVD----GIPFLVAGGI 106 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~-~las~~~d~i~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~----~~~~l~s~~~ 106 (394)
.....|+|.| +|+ ++++-..+.|++++. .+.....+.... ..........+++. |+ +. +.++-..
T Consensus 18 ~~P~~i~~~p----dG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~--pdf~~~g~-lYv~~~~ 89 (353)
T 2g8s_A 18 DHPWALAFLP----DNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLA--PDFAQSRR-IWLSYSE 89 (353)
T ss_dssp SSEEEEEECS----TTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEEC--TTHHHHCE-EEEEEEE
T ss_pred CCcEEEEEcC----CCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEEC--CCCCCCCE-EEEEEeC
Confidence 3568999999 788 787766555888884 333211122110 00123345667766 74 44 3333222
Q ss_pred -------CCeEEEEECCCC--e--eEEEE-Eec------CCceeEEEEcCCCCcEEEEce
Q 016185 107 -------NGIIRVIDVSNE--K--LHKSF-VGH------GDSINEIRTQPLKPSLVVSAS 148 (394)
Q Consensus 107 -------dg~i~vwd~~~~--~--~~~~~-~~~------~~~v~~~~~~~~~~~~l~s~~ 148 (394)
...|..|++... + ....+ ..- ...-..|.|.| ++.++++.+
T Consensus 90 ~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G 148 (353)
T 2g8s_A 90 VGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALG 148 (353)
T ss_dssp ECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEEC
T ss_pred CCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEEC
Confidence 235666666532 1 11222 111 11235799999 566666543
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.87 E-value=3.8 Score=34.54 Aligned_cols=269 Identities=11% Similarity=0.017 Sum_probs=128.8
Q ss_pred CccceeEEEEEeeCCCcceEEEEec-CCcEEEEEcCCCceeEEeeecc--cCCcccceEEEEEEEcCC----CCcEEEE-
Q 016185 32 GKRPLYAVVFNFIDSRYFNVFATVG-GNRVTVYQCLEGGVIAALQSYV--DEDKEESFYTVSWACNVD----GIPFLVA- 103 (394)
Q Consensus 32 h~~~v~~i~~sp~~~~~~~~las~~-~d~i~vw~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~----~~~~l~s- 103 (394)
.-..-+.|+|.| +|.++++-- .++|++++...+.. ..+.... ..........+++. |+ +. +.++
T Consensus 30 gL~~P~~ia~~p----dG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~--Pdf~~~g~-lYv~y 101 (347)
T 3das_A 30 GLNSPWGLAPLP----GGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALS--PDYASDHM-VYAYF 101 (347)
T ss_dssp CCSSEEEEEECT----TSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEEC--TTHHHHCE-EEEEE
T ss_pred CCCCceEEEEcC----CCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEec--cccccCCE-EEEEE
Confidence 345678999999 788888887 44488888655543 2222110 01234556777776 74 44 2222
Q ss_pred -eecCCeEEEEECCCC----------eeE-EEEEe-cCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeecccee
Q 016185 104 -GGINGIIRVIDVSNE----------KLH-KSFVG-HGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCL 170 (394)
Q Consensus 104 -~~~dg~i~vwd~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~ 170 (394)
...++.|.-|.+..+ +.+ ..+.. ....-..|.|.| ++.++++.+.. +..+ ..+=.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~------~~~~-----~~qd~ 169 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGES------GDTG-----LSQDR 169 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCT------TCGG-----GTTCT
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCC------CCCc-----cccCC
Confidence 234556666766541 111 12221 112346799999 66776665430 0000 00000
Q ss_pred eeccCCcEEEEEecCC---------cEEEEeeccCCCcccEEEEEecCCCCeeEEee-ccCCcEEEEEccccceeecccc
Q 016185 171 RVGQDESVRLWNVQTG---------ICILIFAGAGGHRNEVLSVDFHPSDIYRIASC-GMDNTVKIWSMKEFWTYVEKSF 240 (394)
Q Consensus 171 ~~~~d~~i~vwd~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~ 240 (394)
....|.|.-.+.... ..+... +|. ....++|+| ++.++++= +.|+.-.|--+..+ ..+
T Consensus 170 -~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~----G~R-Np~Gla~dp-~G~L~~~d~g~~~~deln~i~~G-----~ny 237 (347)
T 3das_A 170 -KSLGGKILRMTPDGEPAPGNPFPGSPVYSY----GHR-NVQGLAWDD-KQRLFASEFGQDTWDELNAIKPG-----DNY 237 (347)
T ss_dssp -TCSTTCEEEECTTSSBCTTCSSTTCCEEEB----CCS-BCCEEEECT-TCCEEEEECCSSSCEEEEEECTT-----CBC
T ss_pred -CCCCCEEEEEeCCCCccCCCCCCCCeEEee----CCC-CcceEEECC-CCCEEEEecCCCCCceeeEEcCC-----CEe
Confidence 001234433343211 112211 453 345789999 77655443 22332222222221 122
Q ss_pred ccCCCCCCCCccccccceeeeecCCCceEEEEEe-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEE
Q 016185 241 TWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWL-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWF 319 (394)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 319 (394)
.|..............|+..+..+......+.|. +..++..-..+.|....+...... .. ...-+......+..
T Consensus 238 GwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~---~~--~e~~l~~~~gR~~d 312 (347)
T 3das_A 238 GWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAA---AD--PQAFLEGEYGRLRT 312 (347)
T ss_dssp CTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEES---SC--CEEESTTTSSCEEE
T ss_pred cCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCcee---cc--eEEeecCCCCCccE
Confidence 2322221111122334555555444466777777 666666556666766666543210 00 11112233457889
Q ss_pred EEEeecCCcceEEEEeCCC
Q 016185 320 IKFSCDFHYNAAAIGNREG 338 (394)
Q Consensus 320 ~~~~~~~~~~~l~~~~~dg 338 (394)
++..|++. .++++...||
T Consensus 313 v~~~pDG~-lyv~td~~~g 330 (347)
T 3das_A 313 VAPAGGDK-LWLVTSNTDG 330 (347)
T ss_dssp EEEEETTE-EEEEECTTSS
T ss_pred EEECCCCc-EEEEEcCCCC
Confidence 99999994 3444444444
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.13 E-value=11 Score=36.81 Aligned_cols=36 Identities=17% Similarity=0.143 Sum_probs=28.9
Q ss_pred EEEEEcCCCCcEEEEeecCCeEEEEECCCCeeEEEEE
Q 016185 89 VSWACNVDGIPFLVAGGINGIIRVIDVSNEKLHKSFV 125 (394)
Q Consensus 89 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 125 (394)
++....++.. ++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 239 ISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEeecCCCc-EEEEEECCCEEEEEECCCCCeEeeec
Confidence 3333336666 99999999999999999999988764
No 345
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.90 E-value=9.8 Score=33.53 Aligned_cols=110 Identities=14% Similarity=0.111 Sum_probs=59.7
Q ss_pred CCCceEEEEEe--CcEEEEeecCCeEEEecCCCCCCCCCCCcceeccccc------CCCCCeEEEEEeec---CCcceEE
Q 016185 264 HSNYVDCNRWL--GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP------VPECDIWFIKFSCD---FHYNAAA 332 (394)
Q Consensus 264 ~~~~i~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~~---~~~~~l~ 332 (394)
.-...+.|+|. |+++++-...+.|++++..+++. ..+..+. .....+..|+|+|+ +. .+.+
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~-------~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g-~lYv 96 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSV-------KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP-YIYI 96 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-------EEEEECTTCCCCTTSSCSEEEEEECTTTTTSC-EEEE
T ss_pred CCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE-------eEEecCCccccccCCCCceeEEEECCCcCcCC-EEEE
Confidence 34456788887 66666544345788887654421 1111111 13456789999995 32 2333
Q ss_pred EEeC------------CCcEEEEEecCCCc------eeeEEeccCCccCCeeEEEeccCCCEEEEecc
Q 016185 333 IGNR------------EGKIFVWELQSSPP------VLIARLSHAQSKSPIRQTAMSYDGSTILSCCE 382 (394)
Q Consensus 333 ~~~~------------dg~i~iwd~~~~~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 382 (394)
+-+. ...|.-|++..... ..+..+.. ........|+|.|||.+.++.+.
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-SKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-CSSCCEEEEEECTTSCEEEEECC
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-CCCCCCCeEeECCCCeEEEEECC
Confidence 3321 23566666654321 11222331 11234788999999987776543
No 346
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.19 E-value=6.6 Score=30.60 Aligned_cols=97 Identities=13% Similarity=0.000 Sum_probs=55.7
Q ss_pred EEEEeecCCeEEEEECCCCe------eEEEEEec--CCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceee
Q 016185 100 FLVAGGINGIIRVIDVSNEK------LHKSFVGH--GDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLR 171 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~~~------~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~ 171 (394)
+|+....| +++.=...++. ...++ +. =..+.+++|+| ++.+.+. .
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P-~G~LYaV--~---------------------- 58 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSP-GGELYGV--L---------------------- 58 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECT-TSCEEEE--E----------------------
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECC-CccEEEE--e----------------------
Confidence 56666666 55554433332 11222 22 24678999999 7776666 5
Q ss_pred eccCCcEEEEEecCCcE------EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccc
Q 016185 172 VGQDESVRLWNVQTGIC------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 231 (394)
+|.+.-.+..+.+. -..+-. .--....++.|+| ++.+.++ .||.|.-++..+
T Consensus 59 ---~G~Ly~~~~~t~~~~~W~~s~t~IG~--~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 59 ---NDKIYKGTPPTHDNDNWMGRAKKIGN--GGWNQFQFLFFDP-NGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp ---TTEEEEESCCCSTTCCHHHHCEEEEC--SCGGGCSEEEECT-TSCEEEE--ETTEEEEESCCC
T ss_pred ---CCeEEEECCCCCCcccccccccEecc--cccccceEEEECC-CCCEEEe--CCCEEEEeCCCc
Confidence 78766666544211 111210 0111247899999 8887666 569888877644
No 347
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.84 E-value=14 Score=30.77 Aligned_cols=118 Identities=13% Similarity=0.095 Sum_probs=64.4
Q ss_pred ccceEEEEEEEc-CCCCcEEEEeecCCeEEEEECCCCeeE-------EEEEecCCceeEEEEcCCCCcEEEEceeeeEEe
Q 016185 83 EESFYTVSWACN-VDGIPFLVAGGINGIIRVIDVSNEKLH-------KSFVGHGDSINEIRTQPLKPSLVVSASKVIIIS 154 (394)
Q Consensus 83 ~~~v~~~~~~~~-~~~~~~l~s~~~dg~i~vwd~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~ 154 (394)
.+.|..+..... ++.. +++..+.+|.++--.+.+-... ..++. .+.+..+.... ....++..+.
T Consensus 94 ~e~i~~~~~~~~~~~e~-~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~----- 165 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAP-YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSA----- 165 (327)
T ss_dssp TCCEEEEEEESSTTSSS-EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEET-----
T ss_pred CCEEEEEEEeccCCCCC-EEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEEEEEEC-----
Confidence 445554433211 2455 8999999999998876542211 12222 22333333332 2233333344
Q ss_pred eccceeeeeeeccceeeeccCCcEEEEEec--C----Cc---EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEE
Q 016185 155 SLSLICLLLFIRSNCLRVGQDESVRLWNVQ--T----GI---CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVK 225 (394)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~--~----~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~ 225 (394)
.|.+..+... . ++ -...+. + .....|.++...+ .+..++..+..|.++
T Consensus 166 --------------------~G~~~rf~~~~~eip~~gr~a~Gv~~i~-L-~~~d~Vv~~~~~~-~~~~ll~~T~~G~~K 222 (327)
T 3uc1_A 166 --------------------NGQSIRFSATDEALRPMGRATSGVQGMR-F-NIDDRLLSLNVVR-EGTYLLVATSGGYAK 222 (327)
T ss_dssp --------------------TSEEEEEECCTTTSCCCCTTSBCEESSC-C-CTTCCEEEEEECC-TTCEEEEEETTSEEE
T ss_pred --------------------CCeEEEEECcccccCcCCcCCCCeeeec-C-CCCCEEEEEEEEC-CCCEEEEEeCCCcEE
Confidence 7887777665 1 11 111111 1 2345677666655 556788888999999
Q ss_pred EEEccc
Q 016185 226 IWSMKE 231 (394)
Q Consensus 226 iwd~~~ 231 (394)
.-.+..
T Consensus 223 rt~l~e 228 (327)
T 3uc1_A 223 RTAIEE 228 (327)
T ss_dssp EEEGGG
T ss_pred EEEHHH
Confidence 988776
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.06 E-value=34 Score=33.56 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=27.4
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCce
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV 351 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 351 (394)
.+.+++..++. .++++-+.|+++|+|++.+++..
T Consensus 237 ~~~~~~~~~~~--~~lftl~~D~~LRiWsl~t~~~v 270 (950)
T 4gq2_M 237 TIISMIFLSTY--NVLVMLSLDYKLKVLDLSTNQCV 270 (950)
T ss_dssp CEEEEEEETTT--TEEEEEETTCEEEEEETTTTEEE
T ss_pred eEEEEeecCCC--cEEEEEECCCEEEEEECCCCCeE
Confidence 46667776666 68999999999999999998543
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.12 E-value=24 Score=31.15 Aligned_cols=114 Identities=10% Similarity=0.013 Sum_probs=57.9
Q ss_pred ceEEEEEe--Cc-EEEEeecCCeEEEecCCCCCCCCCCCcceeccccc-----CCCCCeEEEEEeec----CCcceEEEE
Q 016185 267 YVDCNRWL--GD-FILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYP-----VPECDIWFIKFSCD----FHYNAAAIG 334 (394)
Q Consensus 267 ~i~~~~~~--~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~----~~~~~l~~~ 334 (394)
.-+.|+|. ++ .++++...|.|++++........ ........+. ........|+|+|+ +. .|++-.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~--~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~-lYv~yt 91 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKE--PYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK-LYVSYT 91 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSS--CSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE-EEEEEE
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeee--eecCCcceeccCccccCCCcceeeEeCCCCcCCCE-EEEEEe
Confidence 44566765 43 35556789999999754321100 0011111111 12456889999996 31 223222
Q ss_pred eC-C----------CcEEEEEecCC--------CceeeEEeccCCccCCeeEEEeccCCCEEEEeccC
Q 016185 335 NR-E----------GKIFVWELQSS--------PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCED 383 (394)
Q Consensus 335 ~~-d----------g~i~iwd~~~~--------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 383 (394)
.. + ..|.-|.+... +.+.+..+........-..|+|.|||.+.++.+..
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 21 1 14444665431 11233333311222346789999999877776544
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=83.12 E-value=17 Score=29.48 Aligned_cols=147 Identities=16% Similarity=0.166 Sum_probs=75.0
Q ss_pred CCcEEEEEecC-CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccc
Q 016185 175 DESVRLWNVQT-GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKY 253 (394)
Q Consensus 175 d~~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (394)
+|.|..|-... ++.-... .....|..++.-. ... ++. . ||.|..|-.....+.
T Consensus 119 ~G~v~~wG~n~~gqlg~~~----~~~~~i~~i~~G~-~~~-~~l-~-~G~v~~wG~n~~gql------------------ 172 (282)
T 3qhy_B 119 DGKVIAWGDDSDGQTTVPA----EAQSGVTALDGGV-YTA-LAV-K-NGGVIAWGDNYFGQT------------------ 172 (282)
T ss_dssp TTEEEEEECCTTSTTSCCG----GGGSSEEEEEECS-SEE-EEE-E-TTEEEEEECCTTSTT------------------
T ss_pred CCeEEEecCCCCCcCCCCc----cCCCCeEEEEccc-CEE-EEE-E-CCEEEEecCCCCCCC------------------
Confidence 57788886543 2221111 2345677887764 333 333 3 799999977652110
Q ss_pred cccceeeeecCCCceEEEEEeCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEE
Q 016185 254 VQFPVFIASVHSNYVDCNRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAI 333 (394)
Q Consensus 254 ~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 333 (394)
..|.. -...|..++......+.- .||.+..|-.....+... .... ...|..++..... .++.
T Consensus 173 -g~p~~----~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~-----p~~~----~~~v~~i~~G~~h---~~al 234 (282)
T 3qhy_B 173 -TVPAE----AQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTV-----PTEA----LSGVSAIASGEWY---SLAL 234 (282)
T ss_dssp -SCCGG----GGSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCC-----CGGG----GSSCCEEEECSSC---EEEE
T ss_pred -CCcee----cCCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCC-----Cccc----CCCceEEEcCCCE---EEEE
Confidence 00100 123466666554444444 699999997665432110 0111 1235555544333 3443
Q ss_pred EeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCC
Q 016185 334 GNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGS 375 (394)
Q Consensus 334 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 375 (394)
. ||.|+.|=.....+..+ ...|.+++-.....
T Consensus 235 ~--~g~v~~wG~n~~gq~~v--------~~~v~~iaaG~~h~ 266 (282)
T 3qhy_B 235 K--NGKVIAWGSSRTAPSSV--------QSGVSSIEAGPNAA 266 (282)
T ss_dssp E--TTEEEEESTTCCCCGGG--------SSCEEEEEECSSCE
T ss_pred E--CCEEEEecCCCCccccC--------CCCcEEEEECcCeE
Confidence 3 89999997655432211 13577777665533
No 351
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=81.30 E-value=9.6 Score=33.95 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=49.3
Q ss_pred CeEEEEEeec----CCcceEEEEeCCCcEEEEEecCC------CceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCe
Q 016185 316 DIWFIKFSCD----FHYNAAAIGNREGKIFVWELQSS------PPVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGA 385 (394)
Q Consensus 316 ~i~~~~~~~~----~~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 385 (394)
..++|+...- +.+..+..|+.+|.|.=.-+... +...+..+.......+|..|.++++..+|..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4677776654 65678999999998854433222 1123444443233578999999999999999999887
Q ss_pred EEE
Q 016185 386 IWR 388 (394)
Q Consensus 386 i~i 388 (394)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.17 E-value=20 Score=32.44 Aligned_cols=72 Identities=11% Similarity=0.046 Sum_probs=50.2
Q ss_pred ceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCC------cE-------EEEeeccC
Q 016185 130 SINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTG------IC-------ILIFAGAG 196 (394)
Q Consensus 130 ~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~------~~-------~~~~~~~~ 196 (394)
....+..+|++..+++++-. +.++.++|++.- +. .....
T Consensus 324 sPHGv~vsPDGkyi~v~GKL-------------------------sptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--- 375 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKL-------------------------SPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--- 375 (638)
T ss_dssp SCCCEEECTTSCEEEEECTT-------------------------SSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB---
T ss_pred CCcceeeCCCCCEEEEcCCC-------------------------CCeEEEEEeehhhhhhhccccCcccceEeecc---
Confidence 34567888944444555555 889999998731 11 22222
Q ss_pred CCcccEEEEEecCCCCeeEEeeccCCcEEEEEccc
Q 016185 197 GHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKE 231 (394)
Q Consensus 197 ~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 231 (394)
-.-.....+|++ +++...+...|..|..|++..
T Consensus 376 -~GlGPlHt~Fd~-~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 376 -LGLGPLHTTFDG-RGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp -CCSCEEEEEECS-SSEEEEEETTTTEEEEEEHHH
T ss_pred -CCCcccEEEECC-CCceEeeeeecceEEEEeccH
Confidence 334567899999 888778888999999999987
No 353
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=80.56 E-value=8.1 Score=34.87 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=52.0
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc--eeeEEeccCCccCCee-EEEeccCCCEEEEeccCCeEEE
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP--VLIARLSHAQSKSPIR-QTAMSYDGSTILSCCEDGAIWR 388 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~dg~i~i 388 (394)
..++++....+.+..+..|+.+|.|.-..+..... .....+.......+|. .|.+++++.+|..++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 57778887777778899999999987666654321 2333444223346785 8999999999999988876655
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.72 E-value=9.5 Score=38.25 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=26.7
Q ss_pred CCCCcEEEEeecCCeEEEEECCCCeeEEEEE
Q 016185 95 VDGIPFLVAGGINGIIRVIDVSNEKLHKSFV 125 (394)
Q Consensus 95 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 125 (394)
++.. ++++-+.|+++|+|++.+++++.+..
T Consensus 247 ~~~~-~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 247 STYN-VLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTT-EEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CCcc-EEEEEeCCCEEEEEECCCCCeEEeec
Confidence 5666 99999999999999999999988765
No 355
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=77.08 E-value=38 Score=29.77 Aligned_cols=57 Identities=18% Similarity=0.179 Sum_probs=34.5
Q ss_pred ceEEEEeCCCcEEEEEecCCCceee---EEeccCCccCCeeEEEeccCCC-EEEEeccCCeEE
Q 016185 329 NAAAIGNREGKIFVWELQSSPPVLI---ARLSHAQSKSPIRQTAMSYDGS-TILSCCEDGAIW 387 (394)
Q Consensus 329 ~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~ 387 (394)
.+++..-..+.|....+........ ..+. .....+..|++.|||. ++++.+..|.|+
T Consensus 370 ~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~--~~~~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 370 TLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMF--KSNNRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp EEEEEBSSSCCEEEEEECTTSSSEEEEEEEES--CCSSCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred cEEEeecCCCEEEEEEECCCCCeeeeeeeeec--ccCCCceeEEECCCCCEEEEEECCCCCCc
Confidence 4555555567777777765221111 1222 1236899999999997 666665566654
No 356
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=71.99 E-value=33 Score=31.91 Aligned_cols=72 Identities=17% Similarity=0.208 Sum_probs=47.1
Q ss_pred eEEEEEe----ecCCcceEEEEeCCCcEE-EEEecCCC-----ceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeE
Q 016185 317 IWFIKFS----CDFHYNAAAIGNREGKIF-VWELQSSP-----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAI 386 (394)
Q Consensus 317 i~~~~~~----~~~~~~~l~~~~~dg~i~-iwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 386 (394)
.+.++.. +++++..+..|+.+|.|. +....... ...+..+.......+|..|.++++...|.+++.++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 4555553 345456888999999985 43332221 1233344433455789999999999999999998877
Q ss_pred EE
Q 016185 387 WR 388 (394)
Q Consensus 387 ~i 388 (394)
+|
T Consensus 494 kV 495 (667)
T 4gz8_A 494 QL 495 (667)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 357
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=69.89 E-value=25 Score=31.54 Aligned_cols=72 Identities=13% Similarity=0.061 Sum_probs=49.8
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEec-CCCceeeEEeccCCccCCe-eEEEeccCCCEEEEeccCCeEEE
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQ-SSPPVLIARLSHAQSKSPI-RQTAMSYDGSTILSCCEDGAIWR 388 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~dg~i~i 388 (394)
..+.|+......+..+..|+.+|.|.-.-+. ......+..+.. ....+| ..|.++++...|..++.++.++|
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 4677777665555788899999998755443 222233344433 334677 48999999999999998887776
No 358
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=67.83 E-value=44 Score=31.11 Aligned_cols=73 Identities=12% Similarity=0.096 Sum_probs=47.1
Q ss_pred CeEEEEEee----cC-CcceEEEEeCCCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCC--CEEEEeccCCeEEE
Q 016185 316 DIWFIKFSC----DF-HYNAAAIGNREGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDG--STILSCCEDGAIWR 388 (394)
Q Consensus 316 ~i~~~~~~~----~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~i~i 388 (394)
..+.|+... ++ .+..+..|+.+|.|.-.-....+...+..+.......+|..|.++++. .+|..++.++.++|
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 356666542 22 246788999999885442222222344444422345789999999988 99999988877665
No 359
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=60.70 E-value=39 Score=30.81 Aligned_cols=61 Identities=7% Similarity=0.058 Sum_probs=41.1
Q ss_pred cceEEEEeCCCcEEEEEecCCC----ceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEE
Q 016185 328 YNAAAIGNREGKIFVWELQSSP----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 388 (394)
Q Consensus 328 ~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 388 (394)
+..+..|+.+|.|.-.-+.... ...+..+.......+|..|.++++...|..++.++.++|
T Consensus 380 ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 380 FHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred eEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4678889999998644333221 122333432234578999999999999999988877665
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=60.12 E-value=41 Score=31.49 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=26.4
Q ss_pred CCCcEEEEeecCCeEEEEECCCCeeEEEEEe
Q 016185 96 DGIPFLVAGGINGIIRVIDVSNEKLHKSFVG 126 (394)
Q Consensus 96 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 126 (394)
+.. ++++-+.|+++|+|++.+++++.+..-
T Consensus 230 ~~~-fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HER-YLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTT-EEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCc-EEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 455 999999999999999999998888764
No 361
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=58.73 E-value=1.3e+02 Score=28.75 Aligned_cols=112 Identities=5% Similarity=-0.013 Sum_probs=53.0
Q ss_pred ccceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCC--cccceEEEEEEEcCCCCcEEEEeecCCe-
Q 016185 33 KRPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDED--KEESFYTVSWACNVDGIPFLVAGGINGI- 109 (394)
Q Consensus 33 ~~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~s~~~dg~- 109 (394)
...|.+|+++|.+ .+.++|.+...+|...+ ..|+....+.....+. ....+..+++. |.....++.+..+..
T Consensus 14 ~g~i~~i~~~p~~--~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~d--p~~~~~i~~~~g~~~~ 88 (789)
T 1sqj_A 14 GGYITGIVAHPKT--KDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALD--PNNPDRLYLAQGRYVG 88 (789)
T ss_dssp CSCEEEEEECSSS--TTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEE--TTEEEEEEEEECSCTT
T ss_pred CCcEEEEEECCCC--CCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEEC--CCCCCEEEEEeCccCC
Confidence 4689999999842 13444443334465554 4555444433211000 13467888777 543224444332211
Q ss_pred ---EEEEECC-CCeeEEEEEec-------C--CceeEEEEcCCCCcEEEEcee
Q 016185 110 ---IRVIDVS-NEKLHKSFVGH-------G--DSINEIRTQPLKPSLVVSASK 149 (394)
Q Consensus 110 ---i~vwd~~-~~~~~~~~~~~-------~--~~v~~~~~~~~~~~~l~s~~~ 149 (394)
-.||.-. .++.-..+... . ..+..+++.|.+...++.+..
T Consensus 89 ~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~ 141 (789)
T 1sqj_A 89 DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR 141 (789)
T ss_dssp SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS
T ss_pred CcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec
Confidence 2334333 33332222210 0 124567777755556655553
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.54 E-value=31 Score=32.24 Aligned_cols=31 Identities=6% Similarity=0.392 Sum_probs=27.3
Q ss_pred CceEEEEEeCcEEEEeecCCeEEEecCCCCC
Q 016185 266 NYVDCNRWLGDFILSKSVDNEIVLWEPKMKE 296 (394)
Q Consensus 266 ~~i~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 296 (394)
..|.++.++..++++-+.|.++|+|++.+++
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCc
Confidence 4577778878899999999999999999886
No 363
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=58.20 E-value=86 Score=26.61 Aligned_cols=26 Identities=15% Similarity=0.023 Sum_probs=15.6
Q ss_pred ccEEEEEecCCCCeeEEeeccCCcEE
Q 016185 200 NEVLSVDFHPSDIYRIASCGMDNTVK 225 (394)
Q Consensus 200 ~~i~~~~~~~~~~~~l~s~~~dg~v~ 225 (394)
..+.+|.++|.+...++.+..++.|.
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~ 202 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVF 202 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEE
T ss_pred CceeEEEECCCCCCEEEEEECCCCEE
Confidence 46889999874444455554444333
No 364
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=58.03 E-value=1.1e+02 Score=27.75 Aligned_cols=73 Identities=8% Similarity=0.081 Sum_probs=47.9
Q ss_pred CeEEEEEee----cCCcceEEEEeCCCcEE-EEEecC-----CCceeeEEeccCC---------ccCCeeEEEeccCCCE
Q 016185 316 DIWFIKFSC----DFHYNAAAIGNREGKIF-VWELQS-----SPPVLIARLSHAQ---------SKSPIRQTAMSYDGST 376 (394)
Q Consensus 316 ~i~~~~~~~----~~~~~~l~~~~~dg~i~-iwd~~~-----~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~ 376 (394)
..+.|+... ++.+..+..|+.+|.|. +..... .+...+..+.... ...+|..|.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 457777775 24457889999999985 433221 1122333333111 1467889999999999
Q ss_pred EEEeccCCeEEE
Q 016185 377 ILSCCEDGAIWR 388 (394)
Q Consensus 377 l~s~~~dg~i~i 388 (394)
|..++.++.++|
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999998887776
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=56.28 E-value=86 Score=26.03 Aligned_cols=174 Identities=9% Similarity=0.025 Sum_probs=91.3
Q ss_pred cccEEEEEecCC--CCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEE-e-
Q 016185 199 RNEVLSVDFHPS--DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW-L- 274 (394)
Q Consensus 199 ~~~i~~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~- 274 (394)
...|.++...+. +...++..+.+|.++.-.+........ .......+.. .+.+..+.. +
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r----------------~G~~~i~lke-~D~lv~~~~~~~ 156 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS----------------GGIVAVNLRD-NDELVGAVLCSA 156 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS----------------SCEESCBCCT-TCCEEEEEEECT
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc----------------CceEEEEECC-CCEEEEEEEecC
Confidence 445555543321 467899999999999998877332110 0111112222 233333333 2
Q ss_pred CcEEEEeecCCeEEEecCC--CCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc--
Q 016185 275 GDFILSKSVDNEIVLWEPK--MKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP-- 350 (394)
Q Consensus 275 ~~~l~~~~~dg~i~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-- 350 (394)
.+.++..+..|.+..+... .-............-.+.. ...|.++...+.. ..++..+..|.++.-.+..-..
T Consensus 157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~--~~ll~~T~~G~~Krt~l~e~~~~~ 233 (327)
T 3uc1_A 157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVVREG--TYLLVATSGGYAKRTAIEEYPVQG 233 (327)
T ss_dssp TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEECCTT--CEEEEEETTSEEEEEEGGGSCBCC
T ss_pred CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC-CCEEEEEEEECCC--CEEEEEeCCCcEEEEEHHHccccC
Confidence 5677778889998888766 2211111111111222322 3346666555544 4788999999999888754321
Q ss_pred ---eeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 351 ---VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 351 ---~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
.-+..+....-.+.+..+....+...++..+.+|.+.-+++.
T Consensus 234 R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 234 RGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 112222211212345555444444556666677776666543
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=55.91 E-value=79 Score=25.47 Aligned_cols=150 Identities=11% Similarity=-0.016 Sum_probs=78.5
Q ss_pred CCcEEEEEecCCc----EEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCC
Q 016185 175 DESVRLWNVQTGI----CILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFP 250 (394)
Q Consensus 175 d~~i~vwd~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
+|.++...+..-. -...+. + ...+.+..+.... +...++..+..|.+..+............
T Consensus 89 ~G~iKr~~l~~~~~~~~G~~~i~-l-kegD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a----------- 154 (276)
T 3no0_A 89 KGYVKKIPLAEFEYKAQGMPIIK-L-TEGDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGA----------- 154 (276)
T ss_dssp TSEEEEEEGGGTTTCSTTEECSC-C-CTTCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTC-----------
T ss_pred CCEEEEEEHHHhhhhcCCeEEEe-c-CCCCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCC-----------
Confidence 9999999876532 111111 1 1234555555554 45567777889998888876622110000
Q ss_pred ccccccceeeeecCCCceEEEEE-e-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCc
Q 016185 251 TKYVQFPVFIASVHSNYVDCNRW-L-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHY 328 (394)
Q Consensus 251 ~~~~~~~~~~~~~~~~~i~~~~~-~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (394)
...+...+.. .+.|.++.. . ++.++..+..|.++...+.........+.. +..+ .....+..+....+.
T Consensus 155 ---~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkG--v~~i-~~~~~lv~~~~~~~~-- 225 (276)
T 3no0_A 155 ---RGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKG--TEVS-GTKDTLVDLIPIKEE-- 225 (276)
T ss_dssp ---CCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCC--EECC-CSSSCEEEEEEESSE--
T ss_pred ---CCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcc--eEEE-cCCCcEEEEEEeCCC--
Confidence 0111112222 244444433 3 568888899999888877654322211111 1111 122344444433322
Q ss_pred ceEEEEeCCCcEEE--EEecC
Q 016185 329 NAAAIGNREGKIFV--WELQS 347 (394)
Q Consensus 329 ~~l~~~~~dg~i~i--wd~~~ 347 (394)
..++..+.+|.+.. ++...
T Consensus 226 ~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 226 VELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEEETTSCEEEEEEEGGG
T ss_pred CEEEEEcCCCeEEEeeeCHHH
Confidence 35777777888877 87654
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.36 E-value=33 Score=31.36 Aligned_cols=59 Identities=7% Similarity=-0.068 Sum_probs=36.0
Q ss_pred eEEEEEeecCCcceEEEEeCC------------CcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEe
Q 016185 317 IWFIKFSCDFHYNAAAIGNRE------------GKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC 380 (394)
Q Consensus 317 i~~~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 380 (394)
.-.|+|+|.+ +++++-..+ +.+.+.+..+++...+..- .....++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G--~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~---P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG--RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG---PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC--CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC---CTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCC--CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC---CCCccCcCeeECCCCCEEEEE
Confidence 4578999998 444432221 2344555555543222222 345789999999999988765
No 368
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=55.13 E-value=33 Score=31.96 Aligned_cols=73 Identities=19% Similarity=0.185 Sum_probs=48.5
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC--ceeeEEeccCCccCCe-eEEEeccCCCEEEEeccCCeEEE
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP--PVLIARLSHAQSKSPI-RQTAMSYDGSTILSCCEDGAIWR 388 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~~dg~i~i 388 (394)
..+.++....+.+..+..|+.+|.|.-.-+.... ...+..+.......+| ..|.++++..+|..++.++.++|
T Consensus 400 ~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 400 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp CBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 3455666665666788999999998755444321 2234444322234676 68999999899999988877665
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.47 E-value=48 Score=30.12 Aligned_cols=60 Identities=7% Similarity=-0.039 Sum_probs=36.3
Q ss_pred CeEEEEEeecCCcceEE-EEeC-----------CCcEEEEEecCCCceeeEEeccCCccCCeeEEEeccCCCEEEEe
Q 016185 316 DIWFIKFSCDFHYNAAA-IGNR-----------EGKIFVWELQSSPPVLIARLSHAQSKSPIRQTAMSYDGSTILSC 380 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~-~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 380 (394)
....|.|.+++. +.+ +=.. .+.+..++..+++...+ +. ......++.++|+||++.|.++
T Consensus 477 sPDnL~fd~~G~--LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~f--l~-~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGR--LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRF--MV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCC--EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEE--EE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCC--EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEE--Ee-CCCCccccCCEECCCCCEEEEE
Confidence 457899999983 444 3211 12455555555543222 22 1223578999999999988875
No 370
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=54.12 E-value=89 Score=25.53 Aligned_cols=121 Identities=7% Similarity=0.025 Sum_probs=62.0
Q ss_pred EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcCCCCcEEEEee----cCCeEEEEECCCCeeEEEEEecCCceeEEE
Q 016185 60 VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNVDGIPFLVAGG----INGIIRVIDVSNEKLHKSFVGHGDSINEIR 135 (394)
Q Consensus 60 i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~s~~----~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~ 135 (394)
|+..++..++.. .+... . ...|+ ++++ .|+-.. .+..|..-++. +.....+..+.. .+
T Consensus 90 Iy~i~~dg~~~~-~l~~~-------~--~~~~s--~~g~-~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~----~~ 151 (302)
T 3s25_A 90 LCRIKRNGHGST-VLDPD-------P--CIYAS--LIGN-YIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL----FT 151 (302)
T ss_dssp EEEEETTSCCCE-EEECS-------C--EEEEE--EETT-EEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC----CC
T ss_pred EEEEeCCCCcce-EeecC-------C--ccEEE--EeCC-EEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc----eE
Confidence 777776665532 23211 1 12455 6777 555443 34456666654 344445554432 34
Q ss_pred EcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeE
Q 016185 136 TQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRI 215 (394)
Q Consensus 136 ~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 215 (394)
+++++..+..+... ...|.+-++..+.....+. + ... ..++| ++..|
T Consensus 152 ~~~~g~~iy~t~~g-------------------------~~~Iy~~~l~g~~~~~l~~---~---~~~-~~~~P-~g~~i 198 (302)
T 3s25_A 152 CNTSDRYFYYNNPK-------------------------NGQLYRYDTASQSEALFYD---C---NCY-KPVVL-DDTNV 198 (302)
T ss_dssp SEEETTEEEEECTT-------------------------TCCEEEEETTTTEEEEEEC---S---CEE-EEEEE-ETTEE
T ss_pred eeEECCEEEEEeCC-------------------------CceEEEEECCCCCEEEEeC---C---Ccc-ceeee-cCCEE
Confidence 56645555556544 6788888876655444333 2 111 23557 55555
Q ss_pred EeeccCC--cEEEEEccc
Q 016185 216 ASCGMDN--TVKIWSMKE 231 (394)
Q Consensus 216 ~s~~~dg--~v~iwd~~~ 231 (394)
+-....+ .|..-++..
T Consensus 199 y~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEEGGGTTEEEEECSSS
T ss_pred EEEEcCCCcEEEEEECCC
Confidence 5444332 454545544
No 371
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=53.35 E-value=1.2e+02 Score=26.73 Aligned_cols=67 Identities=10% Similarity=0.017 Sum_probs=34.2
Q ss_pred CCeEEEEEeecCC----cceEEEEeCCCcEEEEEecCCCceee-EEe-c------cCCccCCeeEEEeccCCCEEEEec
Q 016185 315 CDIWFIKFSCDFH----YNAAAIGNREGKIFVWELQSSPPVLI-ARL-S------HAQSKSPIRQTAMSYDGSTILSCC 381 (394)
Q Consensus 315 ~~i~~~~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~-~------~~~~~~~v~~~~~s~~~~~l~s~~ 381 (394)
..+..+.|..... ...++.+...+.|....+........ ..+ . .......+.++...|||.++++..
T Consensus 276 ~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 276 GPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp -CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred ccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEec
Confidence 4567777754321 01244455457766665544321111 111 0 012235789999999999887765
No 372
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=51.99 E-value=98 Score=25.38 Aligned_cols=173 Identities=9% Similarity=-0.024 Sum_probs=86.6
Q ss_pred cccEEEEEecC--CCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEE-e-
Q 016185 199 RNEVLSVDFHP--SDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW-L- 274 (394)
Q Consensus 199 ~~~i~~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~- 274 (394)
...|.++...+ .++.+++..+.+|.++...+........ .......+..+ +.+..+.. .
T Consensus 94 ~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r----------------~G~~~i~l~~~-d~lv~~~~~~~ 156 (307)
T 1zi0_A 94 DERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT----------------AGKVAIKLVDG-DELIGVDLTSG 156 (307)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT----------------TCEESSCCCTT-CCEEEEEEECT
T ss_pred CCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc----------------CCeEEEEECCC-CEEEEEEEeCC
Confidence 34565554321 1455688889999999998866321100 01111122233 34434333 3
Q ss_pred CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCc----
Q 016185 275 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPP---- 350 (394)
Q Consensus 275 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---- 350 (394)
.+.++..+.+|.+..++...-............-.+.. ...|..+....+. ..+++.+..|.++-.++.....
T Consensus 157 ~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~--~~ll~~T~~G~~Kr~~~~e~~~~~Rg 233 (307)
T 1zi0_A 157 EDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGD--GAILTATQNGYGKRTAVAEYPTKSRA 233 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSS--CEEEEEETTSEEEEECGGGSCCCCTT
T ss_pred CCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCC--CEEEEEEcCCceEEEEHHHhccCCCC
Confidence 45677778889888877654322111111111122222 2345555444444 4688889999998888754210
Q ss_pred -eeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 351 -VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 351 -~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
.-+..+....-.+.+..+....+..-|+..+.+|.+.-+++
T Consensus 234 ~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~ 275 (307)
T 1zi0_A 234 TKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRV 275 (307)
T ss_dssp SCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEG
T ss_pred CCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEec
Confidence 11111221122345555444333444555566776655554
No 373
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=49.06 E-value=1.1e+02 Score=25.03 Aligned_cols=48 Identities=4% Similarity=-0.096 Sum_probs=24.8
Q ss_pred CCcEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEE-eeccCCcEEEEEccc
Q 016185 175 DESVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIA-SCGMDNTVKIWSMKE 231 (394)
Q Consensus 175 d~~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~ 231 (394)
...|..-++.... ...+. .+.. ..++| ++..|+ +......|...++..
T Consensus 128 ~~~Iy~~~~dGs~-~~~lt---~~~~----~~~~~-~g~~iy~t~~g~~~Iy~~~l~g 176 (302)
T 3s25_A 128 ATSLYRIRIDGEE-KKKIK---NHYL----FTCNT-SDRYFYYNNPKNGQLYRYDTAS 176 (302)
T ss_dssp CEEEEEEETTSCC-CEEEE---SSCC----CCSEE-ETTEEEEECTTTCCEEEEETTT
T ss_pred CceEEEEECCCCC-eEEEe---CCCc----eEeeE-ECCEEEEEeCCCceEEEEECCC
Confidence 4455555655333 33333 2322 45566 554455 444456777777766
No 374
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=42.86 E-value=1.5e+02 Score=25.05 Aligned_cols=148 Identities=6% Similarity=-0.067 Sum_probs=78.6
Q ss_pred CCcEEEEEecC---------CcEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCC
Q 016185 175 DESVRLWNVQT---------GICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDL 245 (394)
Q Consensus 175 d~~i~vwd~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 245 (394)
+|.|+--.+.. |.....++ ....+..+.... ....++..+..|.+.-+...........
T Consensus 16 ~GyIKr~~l~~y~~~~r~g~g~~~~~lk----e~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~eip~~~r~------- 83 (370)
T 3l6v_A 16 AGYAKRQPVSAYRAQRRGGRGRSAASTK----EEDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQLPEAGSN------- 83 (370)
T ss_dssp SCEEEEEEHHHHHHTCCCCCCSEEEECS----CCCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTT-------
T ss_pred CCEEEEeeHHHhhhhccCCCCceecccC----CCCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHHCcCCCcc-------
Confidence 99999876542 12223333 345565555554 4455666677887777665442110000
Q ss_pred CCCCCcccccccee---eeecCCCceEEEEE----e-CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCe
Q 016185 246 PSKFPTKYVQFPVF---IASVHSNYVDCNRW----L-GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDI 317 (394)
Q Consensus 246 ~~~~~~~~~~~~~~---~~~~~~~~i~~~~~----~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i 317 (394)
....++. .+. ....|.++.. . +.+++.++..|.++.-.+.........+ ...-.+.. ...+
T Consensus 84 -------a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G--~~ai~L~~-~d~l 152 (370)
T 3l6v_A 84 -------ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARG--KIAINLDE-GDAL 152 (370)
T ss_dssp -------SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTC--EESSCCCT-TCCE
T ss_pred -------cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCc--eEEEEeCC-CCEE
Confidence 0011111 122 2334444432 1 4589999999999998876554322111 11223332 3345
Q ss_pred EEEEEeecCCcceEEEEeCCCcEEEEEecC
Q 016185 318 WFIKFSCDFHYNAAAIGNREGKIFVWELQS 347 (394)
Q Consensus 318 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 347 (394)
..+...... ..++..+.+|.+..++...
T Consensus 153 v~v~~~~~~--~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 153 VGVALTDGD--RDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp EEEEEECSC--CEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCC--ceEEEEeCCCeEEEEEccc
Confidence 555555444 4678888889888888653
No 375
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=41.09 E-value=1.5e+02 Score=24.35 Aligned_cols=197 Identities=8% Similarity=-0.007 Sum_probs=102.5
Q ss_pred eccCCcEEEEEecCCcE-------EEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCC
Q 016185 172 VGQDESVRLWNVQTGIC-------ILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTD 244 (394)
Q Consensus 172 ~~~d~~i~vwd~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 244 (394)
.+.+|.|+--.+..-+. ...+. + ...+.+..+.... ....++..+..|.++-+............
T Consensus 14 ~T~~G~iKr~~~~~~~~~~~~~~g~~~~~-l-ke~D~l~~~~~~~-~~~~ll~~T~~G~~~~~~~~~ip~~~r~~----- 85 (312)
T 1suu_A 14 LTKKGFLKRLSQNEYKLQGTGGKGLSSFD-L-NDGDEIVIALCVN-THDYLFMISNEGKLYLINAYEIKDSSRAS----- 85 (312)
T ss_dssp EETTCBEEEEEGGGSCBCCSSCCCEECCC-C-CTTCCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCC----------
T ss_pred EeCCCEEEEeEHHHhhccccCCCCceecc-c-CCCCEEEEEEEEC-CCCEEEEEECCCeEEEEEHHHCCCCCccC-----
Confidence 33399999887654321 11111 1 1223444444443 44556777788888777765421110000
Q ss_pred CCCCCCccccccc---eeeeecCCCceEEEE-E----eCcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCC
Q 016185 245 LPSKFPTKYVQFP---VFIASVHSNYVDCNR-W----LGDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECD 316 (394)
Q Consensus 245 ~~~~~~~~~~~~~---~~~~~~~~~~i~~~~-~----~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (394)
...+ ...+.. .+.|.++. . ..++++..+..|.++...+........ .....-.+.. ...
T Consensus 86 ---------~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~--~G~~~i~L~~-~d~ 152 (312)
T 1suu_A 86 ---------KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKS--RGVIVIKLND-KDF 152 (312)
T ss_dssp -----------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC------CEECBCCCT-TCC
T ss_pred ---------CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCC--CcEEEEecCC-CCE
Confidence 0001 011111 22333332 2 156788889999999887765432211 1112223333 345
Q ss_pred eEEEEEeecCCcceEEEEeCCCcEEEEEecCCC-----ceeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 317 IWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP-----PVLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 317 i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
+..+....+. ..++..+.+|.+..+....-. ..-+.-+.... ...|.++..-+++..|++.+..|..+..++
T Consensus 153 lv~~~~~~~~--~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 153 VTSAEIVFKD--EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp EEEEEEECTT--CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred EEEEEEeCCC--CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 5555555444 468888999999999886411 01122222112 356666666556667888888999888776
Q ss_pred C
Q 016185 392 I 392 (394)
Q Consensus 392 ~ 392 (394)
.
T Consensus 230 ~ 230 (312)
T 1suu_A 230 S 230 (312)
T ss_dssp G
T ss_pred H
Confidence 4
No 376
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=40.15 E-value=98 Score=28.31 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=27.2
Q ss_pred cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEee
Q 016185 177 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218 (394)
Q Consensus 177 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~ 218 (394)
.+.+.+..+++..+.+.. ....+++.++|+| |++.|+..
T Consensus 510 ~~~~~~~~~g~~~rf~~~--P~gaE~TG~~fsp-Dg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPATGEIRRFMVG--PIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEEC--CTTCEEEEEEECT-TSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeC--CCCccCcCeeECC-CCCEEEEE
Confidence 455666667777666663 3467999999999 76655553
No 377
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=37.66 E-value=25 Score=35.33 Aligned_cols=27 Identities=11% Similarity=0.286 Sum_probs=22.0
Q ss_pred cceeeeccCCcEEEEEecCCcEEEEee
Q 016185 167 SNCLRVGQDESVRLWNVQTGICILIFA 193 (394)
Q Consensus 167 ~~~~~~~~d~~i~vwd~~~~~~~~~~~ 193 (394)
..+++-+.|+++|+|++.+++++.+..
T Consensus 250 ~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 250 NVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred cEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 345566669999999999999988765
No 378
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=35.97 E-value=2e+02 Score=24.45 Aligned_cols=175 Identities=7% Similarity=-0.016 Sum_probs=0.0
Q ss_pred eEEEEECCCC--eeEEEEE------ecCCceeEEEEc---CC----CCcEEEEceeeeEEeeccceeeeeeeccceeeec
Q 016185 109 IIRVIDVSNE--KLHKSFV------GHGDSINEIRTQ---PL----KPSLVVSASKVIIISSLSLICLLLFIRSNCLRVG 173 (394)
Q Consensus 109 ~i~vwd~~~~--~~~~~~~------~~~~~v~~~~~~---~~----~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~ 173 (394)
.|.+||+.+. +.++++. .....+..+.+. |. ++...++=+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~------------------------ 179 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL------------------------ 179 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT------------------------
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC------------------------
Q ss_pred cCCcEEEEEecCCcEEEEeeccCCCc---------------ccEEEEEecCCC----CeeEEeeccCC-cEEEEEccccc
Q 016185 174 QDESVRLWNVQTGICILIFAGAGGHR---------------NEVLSVDFHPSD----IYRIASCGMDN-TVKIWSMKEFW 233 (394)
Q Consensus 174 ~d~~i~vwd~~~~~~~~~~~~~~~~~---------------~~i~~~~~~~~~----~~~l~s~~~dg-~v~iwd~~~~~ 233 (394)
.+.|.|+|+.+++.-+.+...-... ..+..|+++| + ++.|+-....+ .+.-...+-
T Consensus 180 -~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp-~~~~~~~~LYf~plss~~ly~V~T~~-- 255 (381)
T 3q6k_A 180 -RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGD-RDSEGNRPAYYLAGSAIKVYSVNTKE-- 255 (381)
T ss_dssp -TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECC-CCTTSCCEEEEEESSCSEEEEEEHHH--
T ss_pred -CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecC-CcCCCCeEEEEEECCCCcEEEEEHHH--
Q ss_pred eeeccccccCCCCCCCCccccccceeeeecCC--CceEEEEEe---CcEEEEeecCCeEEEecCCC-----CCCCCCCCc
Q 016185 234 TYVEKSFTWTDLPSKFPTKYVQFPVFIASVHS--NYVDCNRWL---GDFILSKSVDNEIVLWEPKM-----KEQSPGEGT 303 (394)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~---~~~l~~~~~dg~i~~~d~~~-----~~~~~~~~~ 303 (394)
+........+..+.... ..-..++.+ |.++++--....|..|+..+ . .
T Consensus 256 ---------------L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~-------n 313 (381)
T 3q6k_A 256 ---------------LKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMK-------N 313 (381)
T ss_dssp ---------------HSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGG-------G
T ss_pred ---------------hhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccC-------c
Q ss_pred ceecccccCCCCCeEEEEEeecCCcceEEEEeC
Q 016185 304 ADILQKYPVPECDIWFIKFSCDFHYNAAAIGNR 336 (394)
Q Consensus 304 ~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~ 336 (394)
...+..-. .-.....+.+..++ .+.+..+.
T Consensus 314 ~~~l~~d~-~l~~pd~~~i~~~g--~Lwv~sn~ 343 (381)
T 3q6k_A 314 TDVVYTSS-RFVFGTDISVDSKG--GLWFMSNG 343 (381)
T ss_dssp EEEEEECT-TCCSEEEEEECTTS--CEEEEECS
T ss_pred eEEEEECC-CccccCeEEECCCC--eEEEEECc
No 379
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=35.14 E-value=2e+02 Score=24.21 Aligned_cols=49 Identities=20% Similarity=0.326 Sum_probs=27.3
Q ss_pred EEEEeecCCeEEEEECCC-CeeEEEE--EecCCceeEEEEcCCCCcEEEEcee
Q 016185 100 FLVAGGINGIIRVIDVSN-EKLHKSF--VGHGDSINEIRTQPLKPSLVVSASK 149 (394)
Q Consensus 100 ~l~s~~~dg~i~vwd~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~ 149 (394)
.|..|...| +.+++... ++.-..+ ......|.+|++.|.+...+..+..
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~ 75 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAAR 75 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEE
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEec
Confidence 577777777 54555332 2222222 1224579999999854455555554
No 380
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=30.54 E-value=2.5e+02 Score=25.62 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=26.6
Q ss_pred cEEEEEecCCcEEEEeeccCCCcccEEEEEecCCCCeeEEee
Q 016185 177 SVRLWNVQTGICILIFAGAGGHRNEVLSVDFHPSDIYRIASC 218 (394)
Q Consensus 177 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~ 218 (394)
.+..++..+++....+.. .....++.++|+| |++.|++.
T Consensus 510 ~v~~~dp~tGel~~fl~~--P~~aEpnGiafSP-D~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVG--PIGCEVTGISFSP-DQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEEC--CTTCEEEEEEECT-TSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeC--CCCccccCCEECC-CCCEEEEE
Confidence 566667767776665541 1346799999999 77666554
No 381
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=28.69 E-value=1.6e+02 Score=26.44 Aligned_cols=74 Identities=19% Similarity=0.217 Sum_probs=45.7
Q ss_pred CCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC-c-eeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEE
Q 016185 314 ECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP-P-VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWR 388 (394)
Q Consensus 314 ~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~i 388 (394)
...++.++..+.+.+..+..|+.+|.|.-.-+.... . .....+.......+|. ..++.++++|..++.++.++|
T Consensus 404 ~~~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~-~~l~~~~~~Lyv~s~~~V~~v 479 (527)
T 4fww_A 404 PVQVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQ-RDVSRLGDHLLFASGDQVFQV 479 (527)
T ss_dssp TCCEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBC-SCCEEETTEEEEEETTEEEEE
T ss_pred ceEEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceee-hhcccCCCEEEEEECCEEEEE
Confidence 345788888888777789999999998655443321 1 1222222213334554 234445668888888876665
No 382
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=28.47 E-value=2.8e+02 Score=23.72 Aligned_cols=182 Identities=11% Similarity=-0.071 Sum_probs=82.6
Q ss_pred cccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEEeCcEE
Q 016185 199 RNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRWLGDFI 278 (394)
Q Consensus 199 ~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l 278 (394)
...|..|+... ...+.-..+|.|+.|-....-+.-....................|..........|..++......
T Consensus 178 ~~~i~~va~G~---~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~ 254 (423)
T 3mvd_K 178 GTVCCSIASGA---DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCT 254 (423)
T ss_dssp TCCEEEEEECS---SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEE
T ss_pred CCcEEEEecCC---CeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEE
Confidence 44677777653 334445678999999765421111000000000000000111122222222334566666554443
Q ss_pred EEe-ecCCeEEEecCCCCCCCCCCC--cceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC------
Q 016185 279 LSK-SVDNEIVLWEPKMKEQSPGEG--TADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP------ 349 (394)
Q Consensus 279 ~~~-~~dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------ 349 (394)
+.. ..+|.|..|-.....+..... ..............|..++.. . ...+.-..||.|+.|=.....
T Consensus 255 ~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~--~ht~alt~~G~v~~wG~n~~GqLG~g~ 330 (423)
T 3mvd_K 255 FMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--Q--HHTVILTTDLKCSVVGRPEYGRLGLGD 330 (423)
T ss_dssp EEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--S--SEEEEEETTCCEEEEECCGGGTTCSSS
T ss_pred EEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--c--CeEEEEeCCCcEEEEECCCCCCCCCCC
Confidence 333 689999999765432211100 000001111112345544432 2 245555678999999754210
Q ss_pred --c--eeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEEc
Q 016185 350 --P--VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDA 391 (394)
Q Consensus 350 --~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 391 (394)
. .....+. .-...|..++.... .-+.-..||.|+.|-.
T Consensus 331 ~~~~~~~p~~v~--~l~~~v~~ia~G~~--hs~alt~~G~v~~wG~ 372 (423)
T 3mvd_K 331 VKDVVEKPTIVK--KLTEKIVSVGCGEV--CSYAVTIDGKLYSWGS 372 (423)
T ss_dssp CCSCEEEEEECT--TCCSCEEEEEEETT--EEEEEETTSCEEEEEC
T ss_pred ccccccCceEec--cCCCCEEEEEcCCC--eEEEEcCCCCEEEECC
Confidence 0 1111222 22236777766533 3333467889999854
No 383
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=27.73 E-value=3.9e+02 Score=25.14 Aligned_cols=111 Identities=7% Similarity=0.033 Sum_probs=53.0
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCcEEEEEcCCCceeEEeeecccCC--cccceEEEEEEEcCCCCcEEEEeec-C---
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNRVTVYQCLEGGVIAALQSYVDED--KEESFYTVSWACNVDGIPFLVAGGI-N--- 107 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~i~vw~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~s~~~-d--- 107 (394)
+.|..|+++|.+ .+.++|....++|...+ ..|+....+....... ....|..+++.+...+. +++..+. .
T Consensus 23 g~i~~i~~~p~~--~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~-v~v~~~~~~~~~ 98 (737)
T 2cn3_A 23 GFMPGIVFNETE--KDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNR-VYIVAGMYTNDW 98 (737)
T ss_dssp SCCCEEEECSSS--TTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTC-EEEEECSCSSSS
T ss_pred ceeeEEEECCCC--CCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCE-EEEEeccccccc
Confidence 389999999942 13445443344466655 4455444433211000 12457777776321233 3333221 1
Q ss_pred --CeEEEEECCC-CeeEEEEEe-cC--------CceeEEEEcCCCCcEEEEce
Q 016185 108 --GIIRVIDVSN-EKLHKSFVG-HG--------DSINEIRTQPLKPSLVVSAS 148 (394)
Q Consensus 108 --g~i~vwd~~~-~~~~~~~~~-~~--------~~v~~~~~~~~~~~~l~s~~ 148 (394)
+...||.-.+ ++.-..+.. .. ..+..|+++|.+...++.+.
T Consensus 99 ~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 99 LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 1244555433 332222221 10 12467889887666666655
No 384
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=27.65 E-value=2.6e+02 Score=23.08 Aligned_cols=175 Identities=9% Similarity=-0.098 Sum_probs=86.0
Q ss_pred ccEEEEEecCC--CCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEE-e-C
Q 016185 200 NEVLSVDFHPS--DIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW-L-G 275 (394)
Q Consensus 200 ~~i~~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~-~ 275 (394)
..|.++...+. ++.+++..+.+|.++...+........ ........+... +.+..+.. . .
T Consensus 92 e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r---------------~~G~~ai~l~e~-d~lv~~~~~~~~ 155 (323)
T 1wp5_A 92 EEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY---------------SKPLTGINLKND-DQVVDVHLTDGM 155 (323)
T ss_dssp CCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC---------------SSCEECSCCCTT-CCEEEEEEECSC
T ss_pred CEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc---------------cCceEEEEeCCC-CEEEEEEEeCCC
Confidence 44555433331 255688889999999998876321100 001111122222 33333333 2 5
Q ss_pred cEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeecCCcceEEEEeCCCcEEEEEecCCC-----c
Q 016185 276 DFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSP-----P 350 (394)
Q Consensus 276 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~ 350 (394)
+.++..+.+|.+..++...-............-.+.. ...|..+...+++. ..+++.+..|..+..++..-. .
T Consensus 156 ~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~-~~ll~vt~~G~gKr~~~~e~~~~~Rg~ 233 (323)
T 1wp5_A 156 NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKD-ESIVVATQRGAVKKMKLTEFEKATRAK 233 (323)
T ss_dssp SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTT-CEEEEEETTSEEEEEEGGGSCCCCTTS
T ss_pred CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCC-cEEEEEECCCceEEEEHHHccccCCCC
Confidence 6777888899988887654321111111112222322 23455555444431 268888888988888876521 0
Q ss_pred eeeEEec-cCCccCCeeEEEeccCCCEEEEeccCCeEEEEEcC
Q 016185 351 VLIARLS-HAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWDAI 392 (394)
Q Consensus 351 ~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 392 (394)
.-+..+. .......+..+....++..++..+.+|.+...++.
T Consensus 234 kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 234 RGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp CCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred CCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 1112221 10112245433332333445556667766655553
No 385
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=24.92 E-value=2.7e+02 Score=22.31 Aligned_cols=203 Identities=13% Similarity=0.052 Sum_probs=101.1
Q ss_pred cceeEEEEEeeCCCcceEEEEecCCc---EEEEEcCCCceeEEeeecccCCcccceEEEEEEEcC-CCCcEEEEeecCCe
Q 016185 34 RPLYAVVFNFIDSRYFNVFATVGGNR---VTVYQCLEGGVIAALQSYVDEDKEESFYTVSWACNV-DGIPFLVAGGINGI 109 (394)
Q Consensus 34 ~~v~~i~~sp~~~~~~~~las~~~d~---i~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~l~s~~~dg~ 109 (394)
+.+..+..... ...+++..+.+. +.+|++..+.... + . ...+.|..+-. .. +.. +++..+.+|.
T Consensus 24 D~~~~~~~~~t---~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l----l-~~~e~i~~v~~--~~~~~~-~~v~~T~~G~ 91 (276)
T 3no0_A 24 APVVNILRVPF---TEGLFLVSNRGRVYWIAGSQALQGSKVS-L----K-SREEKIVGAFI--REKFGN-RLLLATKKGY 91 (276)
T ss_dssp CCEEEEEEEET---TSCEEEEETTSEEEEECSHHHHTSEECC-C----S-STTCCEEEEEE--GGGSCS-EEEEEETTSE
T ss_pred CeEEEEEEECC---CCEEEEEcCCCeEEEEEhhhCccCcccc-c----C-CCCCEEEEEEC--CcCCCC-EEEEEeCCCE
Confidence 44555554431 334555555554 3345554332211 1 1 23455555422 22 345 8999999999
Q ss_pred EEEEECCCCe------eEEEEEecCCceeEEEEcCCCCcEEEEceeeeEEeeccceeeeeeeccceeeeccCCcEEEEEe
Q 016185 110 IRVIDVSNEK------LHKSFVGHGDSINEIRTQPLKPSLVVSASKVIIISSLSLICLLLFIRSNCLRVGQDESVRLWNV 183 (394)
Q Consensus 110 i~vwd~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~i~vwd~ 183 (394)
++-..+.+-. ....++. .+.+..+.... +...++..+. .|.+..+..
T Consensus 92 iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~-~~~~ill~T~-------------------------~G~~~r~~~ 144 (276)
T 3no0_A 92 VKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSV-DETHILLFTK-------------------------KGRVARFSV 144 (276)
T ss_dssp EEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECC-SSCEEEEEET-------------------------TSEEEEEEG
T ss_pred EEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeC-CCCEEEEEEC-------------------------CCEEEEEEh
Confidence 9998875432 1111221 22333333332 2223333333 888877765
Q ss_pred cC----C---cEEEEeeccCCCcccEEEEEecCCCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCcccccc
Q 016185 184 QT----G---ICILIFAGAGGHRNEVLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQF 256 (394)
Q Consensus 184 ~~----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (394)
.. + +-...+. + .....|..+...+ ++..++..+..|.++...+......... ..
T Consensus 145 ~eip~~gR~a~Gv~~i~-L-~~~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~e~~~~~R~----------------gk 205 (276)
T 3no0_A 145 REVPPSTPGARGVQGIK-L-EKNDETSGLRIWN-GEPYLLVITAKGRVKKISHEEIPKTNRG----------------VK 205 (276)
T ss_dssp GGSCBCCTTCCCEECCC-C-CTTCCEEEEEEES-SCSEEEEEETTSCEEEEEGGGSCCCCTT----------------CC
T ss_pred hhCCCcCCCCCCEEEEc-c-CCCCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHHHcccCCCC----------------Cc
Confidence 32 1 1111121 1 1335666665555 5567888889999999988763221100 11
Q ss_pred ceeeeecCCCceEEEEE-e-CcEEEEeecCCeEEE--ecCCCC
Q 016185 257 PVFIASVHSNYVDCNRW-L-GDFILSKSVDNEIVL--WEPKMK 295 (394)
Q Consensus 257 ~~~~~~~~~~~i~~~~~-~-~~~l~~~~~dg~i~~--~d~~~~ 295 (394)
-+..+ ...+.+..+.. . .+.++..+.+|.+.. ++...-
T Consensus 206 Gv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~i 247 (276)
T 3no0_A 206 GTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKDI 247 (276)
T ss_dssp CEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGGS
T ss_pred ceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHHC
Confidence 11222 22333443333 2 446666778888877 776543
No 386
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=24.45 E-value=3.7e+02 Score=23.72 Aligned_cols=71 Identities=10% Similarity=0.072 Sum_probs=44.3
Q ss_pred CeEEEEEeecCCcceEEEEeCCCcEEEEEecCCCce----eeEEeccCCccCCee-EEEecc-CCCEEEEeccCCeEEEE
Q 016185 316 DIWFIKFSCDFHYNAAAIGNREGKIFVWELQSSPPV----LIARLSHAQSKSPIR-QTAMSY-DGSTILSCCEDGAIWRW 389 (394)
Q Consensus 316 ~i~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~v~-~~~~s~-~~~~l~s~~~dg~i~iw 389 (394)
.+++++...-..+..+..|+.+|.|+---+...... ....+. ...+|. .+.++| ++..|..++..+.+++.
T Consensus 341 ~LTsVav~vv~~~TVlFLGTd~G~L~KVvv~~~~~~~~~~~~~ei~---ee~~V~~~L~ldp~~~~~LyV~s~~~V~qVP 417 (476)
T 3nvn_B 341 DLTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIK---EETPVFYKLVPDPVKNIYIYLTAGKEVRRIR 417 (476)
T ss_dssp SEEEEEEEESSSSEEEEEEETTSEEEEEECCTTSCCCCCEEEEECT---TCCCBCSCCEECSSCTTEEEEEETTEEEEEE
T ss_pred CCceEEEEEeCCeEEEEEECCCceEEEEEecCCCCccceeEEEeec---CCCccccccccCccccceEEEecCcEEEEEE
Confidence 477777776666678889999999864333222111 111221 224565 678887 57788888888776653
No 387
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=23.86 E-value=3.3e+02 Score=23.02 Aligned_cols=174 Identities=10% Similarity=-0.044 Sum_probs=84.8
Q ss_pred cccEEEEEecC--CCCeeEEeeccCCcEEEEEccccceeeccccccCCCCCCCCccccccceeeeecCCCceEEEEE-e-
Q 016185 199 RNEVLSVDFHP--SDIYRIASCGMDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCNRW-L- 274 (394)
Q Consensus 199 ~~~i~~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~- 274 (394)
...|.++.... ..+.+|+.++..|.++...+........ .......+.. .+.+..+.. +
T Consensus 98 ~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~----------------~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 98 GERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLA----------------RGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCT----------------TCEESSCCCT-TCCEEEEEEECS
T ss_pred CCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccC----------------CceEEEEeCC-CCEEEEEEEeCC
Confidence 34555554332 1345788899999999999877432100 0111112222 233333333 3
Q ss_pred CcEEEEeecCCeEEEecCCCCCCCCCCCcceecccccCCCCCeEEEEEeec-----------------------------
Q 016185 275 GDFILSKSVDNEIVLWEPKMKEQSPGEGTADILQKYPVPECDIWFIKFSCD----------------------------- 325 (394)
Q Consensus 275 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------------------------- 325 (394)
.+.++..+..|.+..++...-............-.+.. ...|.++...+.
T Consensus 161 ~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~ 239 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVID 239 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEECCC----------------------------
T ss_pred CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCC-CCEEEEEEEeccccccccccccccccccccccccccccccc
Confidence 45677778888888887654322111111111112221 234444444431
Q ss_pred ----CCcceEEEEeCCCcEEEEEecCCCc-----eeeEEeccCCccCCeeEEEeccCCCEEEEeccCCeEEEEE
Q 016185 326 ----FHYNAAAIGNREGKIFVWELQSSPP-----VLIARLSHAQSKSPIRQTAMSYDGSTILSCCEDGAIWRWD 390 (394)
Q Consensus 326 ----~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 390 (394)
.....+++.+..|..+...+..-.. .-+..+......+.+..+.+..+..-++..+..|.+.-..
T Consensus 240 ~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~ 313 (370)
T 3l6v_A 240 VADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTR 313 (370)
T ss_dssp -------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEE
T ss_pred cccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEee
Confidence 0114788899999999888764321 1122222112234555554333434444455566554444
No 388
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.77 E-value=2.9e+02 Score=25.72 Aligned_cols=57 Identities=5% Similarity=-0.085 Sum_probs=35.2
Q ss_pred ceeeeccCCcEEEE-EecCCc-EEEEeeccCCCcccEEEEEecCCCC--eeEEeeccCCcEEE
Q 016185 168 NCLRVGQDESVRLW-NVQTGI-CILIFAGAGGHRNEVLSVDFHPSDI--YRIASCGMDNTVKI 226 (394)
Q Consensus 168 ~~~~~~~d~~i~vw-d~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~--~~l~s~~~dg~v~i 226 (394)
.++.|+.+|.|.-. ....+. .+..+... ....+|..+.+++ +. ..|+.++.++.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~-~~~~pI~~l~l~~-~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLF-QDFEPVQTLLLSS-KKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECC-TTCCCCCEEEECC-SSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEeccc-CCCCcceeeEecc-CCCccEEEEEEcCeEEEE
Confidence 57778888877443 333322 22222221 2457888999998 65 77888877765555
Done!