Query         016186
Match_columns 394
No_of_seqs    286 out of 1739
Neff          8.2 
Searched_HMMs 29240
Date          Mon Mar 25 09:21:30 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016186.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016186hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3qn1_B Protein phosphatase 2C  100.0   5E-54 1.7E-58  418.7  26.3  296   96-392    12-336 (337)
  2 3kdj_B Protein phosphatase 2C  100.0 2.5E-53 8.4E-58  410.4  27.4  289   97-393     8-314 (316)
  3 2p8e_A PPM1B beta isoform vari 100.0 5.6E-51 1.9E-55  392.4  24.5  263   95-387    21-301 (307)
  4 2i0o_A Ser/Thr phosphatase; be 100.0 1.1E-49 3.9E-54  382.7  25.6  253   95-384    20-304 (304)
  5 1a6q_A Phosphatase 2C; catalyt 100.0 1.9E-49 6.3E-54  391.9  26.8  261   96-387    20-295 (382)
  6 2iq1_A Protein phosphatase 2C  100.0 2.8E-49 9.7E-54  374.5  26.9  250   97-388     7-266 (274)
  7 2i44_A Serine-threonine phosph 100.0 2.3E-48   8E-53  376.8  27.5  263   97-386    21-323 (324)
  8 4da1_A Protein phosphatase 1K, 100.0 3.6E-48 1.2E-52  384.2  26.1  252   98-391   122-383 (389)
  9 2isn_A NYSGXRC-8828Z, phosphat 100.0 5.3E-48 1.8E-52  379.4  26.1  254   97-388    12-337 (364)
 10 3d8k_A PP2C, protein phosphata 100.0 3.5E-48 1.2E-52  381.9  19.4  252   96-388    11-328 (377)
 11 2j4o_A Mitogen-activated prote 100.0 2.6E-48 8.8E-53  386.4  16.1  255   97-386    26-368 (401)
 12 2irm_A Mitogen-activated prote 100.0 3.6E-47 1.2E-51  373.2  19.8  244  103-385    25-357 (358)
 13 2pnq_A [pyruvate dehydrogenase 100.0 6.3E-47 2.2E-51  382.1  20.6  271   98-389    37-460 (467)
 14 2pk0_A Serine/threonine protei 100.0 1.8E-42 6.3E-47  322.9  23.9  241   97-386     5-248 (250)
 15 1txo_A Putative bacterial enzy 100.0 8.9E-42 3.1E-46  315.8  21.6  229   97-384     4-236 (237)
 16 2j82_A TPPHA, protein serine-t 100.0 5.7E-41 1.9E-45  310.8  24.6  234   98-383     1-240 (240)
 17 2jfr_A Ser-Thr phosphatase MSP 100.0 2.9E-39 9.8E-44  298.4  22.3  224   97-383     5-233 (234)
 18 3rnr_A Stage II sporulation E  100.0 6.3E-37 2.1E-41  278.8  14.5  195  145-383     8-211 (211)
 19 3t91_A Stage II sporulation pr  99.9 3.2E-22 1.1E-26  185.1  16.7  206   96-386     6-222 (242)
 20 3pu9_A Protein serine/threonin  99.9 1.1E-20 3.7E-25  175.1  22.7  204   97-386    10-226 (242)
 21 3zt9_A Serine phosphatase; hyd  99.8 6.2E-17 2.1E-21  144.6  20.7  188   97-382     3-193 (193)
 22 3f79_A Probable two-component   99.8 4.6E-17 1.6E-21  151.6  20.4  206   98-384    38-253 (255)
 23 3ke6_A Protein RV1364C/MT1410;  99.3   7E-10 2.4E-14  109.7  24.6  211   98-385    36-258 (399)
 24 3eq2_A Probable two-component   98.5 1.4E-06   5E-11   85.3  15.0  177  145-384   201-392 (394)
 25 1b9l_A Protein (epimerase); is  27.7 1.7E+02  0.0058   22.6   6.8   55  321-382    48-102 (120)
 26 3v9o_A Dihydroneopterin aldola  25.6 1.8E+02  0.0062   23.3   6.8   53  321-380    66-118 (143)
 27 3out_A Glutamate racemase; str  22.0      23 0.00077   32.2   0.5   21  149-169     9-30  (268)
 28 4aey_A D-erythro-7,8-dihydrone  21.3   2E+02  0.0067   23.6   6.1   57  319-382    82-138 (156)

No 1  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00  E-value=5e-54  Score=418.65  Aligned_cols=296  Identities=51%  Similarity=0.819  Sum_probs=236.2

Q ss_pred             CcceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           96 KGVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        96 ~~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      ....||.++++|+|.+|||++++..++....+..+.+.... ........+..||+|||||||+.+|++|+++++..|.+
T Consensus        12 ~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g-~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~   90 (337)
T 3qn1_B           12 CIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEG-MSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAE   90 (337)
T ss_dssp             CSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC-----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHH
T ss_pred             ccCceEEEEeeeCCchhhhHHHHHhhhhcccchhccccccc-ccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHH
Confidence            33569999999999999999999876543211111111000 00000113578999999999999999999999999999


Q ss_pred             HHhhhcc-------cchHHHHHHHHHHHHHHHHhHHHHHhc--------------cCCCCCCceEEEEEEECCEEEEeec
Q 016186          176 EWDRERV-------CSDWQRRWEVAFSSGFERTDNEVLTEA--------------AAPEMVGSTAVVVVLSGCQIITSNC  234 (394)
Q Consensus       176 ~~~~~~~-------~~~~~~~~~~~l~~a~~~~~~~l~~~~--------------~~~~~~GtT~~~~~i~~~~l~vanv  234 (394)
                      .+.....       .......+.++|.++|.++|+.+....              .....+|||++++++.++++|++||
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anv  170 (337)
T 3qn1_B           91 EIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNC  170 (337)
T ss_dssp             HHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEE
T ss_pred             HHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEec
Confidence            8765422       112245678999999999999998754              1123499999999999999999999


Q ss_pred             CCceEEEEeCCeeeecCCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCC
Q 016186          235 GDSRAVLCRGTETIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDED  314 (394)
Q Consensus       235 GDSR~yl~r~g~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~  314 (394)
                      ||||+|++|+|++++||+||++.++.|..||...++.+..+++.|+++.+++||+||+..+|++++++|++..+.+.+.+
T Consensus       171 GDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~  250 (337)
T 3qn1_B          171 GDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSRED  250 (337)
T ss_dssp             SSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTE
T ss_pred             cCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988889


Q ss_pred             cEEEEEcCCCCCCCCHHHHHHHHHHHHHhhhhcc----cc----cCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCc
Q 016186          315 ECLILASDGLWDVMTNEEVGEVARRLLRRRRRSL----LV----DEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAK  386 (394)
Q Consensus       315 d~llL~SDGlwd~l~~~ei~~iv~~~l~~~~~~~----~~----~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~  386 (394)
                      +|||||||||||+|++++|+++++..+..+....    ..    ....+++.+|+.|++.|+.+|+.||||||||+|+.+
T Consensus       251 d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~~  330 (337)
T 3qn1_B          251 ECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQ  330 (337)
T ss_dssp             EEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCSC
T ss_pred             CEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecCC
Confidence            9999999999999999999999987543211000    00    012467899999999999999999999999999998


Q ss_pred             chhhhc
Q 016186          387 KKRQQR  392 (394)
Q Consensus       387 ~~~~~~  392 (394)
                      ++++.|
T Consensus       331 ~~~~~~  336 (337)
T 3qn1_B          331 RKFKTR  336 (337)
T ss_dssp             C-----
T ss_pred             cccccC
Confidence            877765


No 2  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00  E-value=2.5e-53  Score=410.40  Aligned_cols=289  Identities=52%  Similarity=0.878  Sum_probs=234.0

Q ss_pred             cceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEE  176 (394)
Q Consensus        97 ~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~  176 (394)
                      ...||+++++|+|.+|||++++..++..........      .......+..||+|||||||+.+|++|++++++.|.+.
T Consensus         8 ~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~   81 (316)
T 3kdj_B            8 VPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLD------GRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEE   81 (316)
T ss_dssp             --CEEEEEECTTSSSCCEEEEEETTCC-----------------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeEeCCCCCccceeeeccccccccccccc------ccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHH
Confidence            478999999999999999999987654311000000      00011236789999999999999999999999999988


Q ss_pred             Hhhhcc----cchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEECCEEEEeecCCceEEEEeCCeeeecCC
Q 016186          177 WDRERV----CSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLSGCQIITSNCGDSRAVLCRGTETIPLTV  252 (394)
Q Consensus       177 ~~~~~~----~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~  252 (394)
                      +.....    ...+.+.+..+|.++|..+|+.+...  ....+|||++++++.++++|++||||||+|++|+|++++||+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~  159 (316)
T 3kdj_B           82 IAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESV--APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSV  159 (316)
T ss_dssp             HHHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGT--SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCC
T ss_pred             HHhhhcccccccchHHHHHHHHHHHHHHHHHHHhcc--cCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCC
Confidence            765432    23445678899999999999998654  234599999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHHH
Q 016186          253 DQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEE  332 (394)
Q Consensus       253 DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~e  332 (394)
                      ||++.++.|+.||...++.+..+++.|++|.+++||+||+..+|+.++++|++..+.+.+.++|||||||||||+|+++|
T Consensus       160 DH~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~e  239 (316)
T 3kdj_B          160 DHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEE  239 (316)
T ss_dssp             CCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHH
T ss_pred             CCCCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999998888889999999999999999999


Q ss_pred             HHHHHHHHHHhhhhccc--------------ccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCcchhhhcc
Q 016186          333 VGEVARRLLRRRRRSLL--------------VDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAKKKRQQRQ  393 (394)
Q Consensus       333 i~~iv~~~l~~~~~~~~--------------~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~~~~~~~~  393 (394)
                      |+++++..+..+.....              .....+++.+|+.|++.|+.+|+.||||||||+|+.+++.+.|+
T Consensus       240 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~~~~~~~~~  314 (316)
T 3kdj_B          240 ACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKSKP  314 (316)
T ss_dssp             HHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSCC-------
T ss_pred             HHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCcccCCC
Confidence            99999875432111000              01124678999999999999999999999999999988776654


No 3  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00  E-value=5.6e-51  Score=392.38  Aligned_cols=263  Identities=37%  Similarity=0.544  Sum_probs=219.2

Q ss_pred             CCcceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHH
Q 016186           95 NKGVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIA  174 (394)
Q Consensus        95 ~~~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~  174 (394)
                      +..+.||+++++|+|..|||++++..++..                  ...+..||+|||||||+.+|++|++.+++.|.
T Consensus        21 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~------------------~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~   82 (307)
T 2p8e_A           21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPH------------------GLEDWSFFAVYDGHAGSRVANYCSTHLLEHIT   82 (307)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETT------------------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHH
T ss_pred             CCCeeEEEEecCCCCCcccceEEEEecCCC------------------CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence            356999999999999999999988653210                  11356899999999999999999999999997


Q ss_pred             HH--Hhhhcc----cchHHHHHHHHHHHHHHHHhHHHHHhccC---CCCCCceEEEEEEECCEEEEeecCCceEEEEeCC
Q 016186          175 EE--WDRERV----CSDWQRRWEVAFSSGFERTDNEVLTEAAA---PEMVGSTAVVVVLSGCQIITSNCGDSRAVLCRGT  245 (394)
Q Consensus       175 ~~--~~~~~~----~~~~~~~~~~~l~~a~~~~~~~l~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g  245 (394)
                      +.  +.....    .......+.++|.++|..+|+.+.+....   ...+|||++++++.++++|++||||||+|++|+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g  162 (307)
T 2p8e_A           83 TNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG  162 (307)
T ss_dssp             TSTTTC-----------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETT
T ss_pred             hhHhhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC
Confidence            52  221100    00113457888999999999999876432   2459999999999999999999999999999999


Q ss_pred             eeeecCCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCC---------CCcccCCeeEEEeecCCCcE
Q 016186          246 ETIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLR---------PCIIPVPEITFTTRTDEDEC  316 (394)
Q Consensus       246 ~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k---------~~v~~~P~i~~~~~~~~~d~  316 (394)
                      ++++||+||++.++.|+.||...|+.+..   .|++|.+.+||+||+..+|         ++++++|++..+.+.+.|+|
T Consensus       163 ~~~~lT~DH~~~~~~E~~rI~~~gg~v~~---~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~  239 (307)
T 2p8e_A          163 QVCFSTQDHKPCNPREKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEF  239 (307)
T ss_dssp             EEEEECCCCCTTSHHHHHHHHHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEE
T ss_pred             ccccCCCCCCCCCHHHHHHHHHcCCEEEe---CcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeE
Confidence            99999999999999999999999998864   6999999999999998876         45789999999888876679


Q ss_pred             EEEEcCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCcc
Q 016186          317 LILASDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAKK  387 (394)
Q Consensus       317 llL~SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~~  387 (394)
                      ||||||||||+|++++|+++++..+.         ...+++++|+.|++.|+.+|+.||||||||++...+
T Consensus       240 llL~SDGl~d~ls~~ei~~~v~~~~~---------~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          240 IILACDGIWDVMSNEELCEYVKSRLE---------VSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             EEEECHHHHTTSCHHHHHHHHHHHHT---------TCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC----
T ss_pred             EEEECCCcccCCCHHHHHHHHHHHHh---------cCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCCC
Confidence            99999999999999999999987532         236789999999999999999999999999997654


No 4  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00  E-value=1.1e-49  Score=382.75  Aligned_cols=253  Identities=34%  Similarity=0.555  Sum_probs=211.5

Q ss_pred             CCcceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHH
Q 016186           95 NKGVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIA  174 (394)
Q Consensus        95 ~~~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~  174 (394)
                      +..+.||+++++|+|..|||++++..++                     ..+..||+|||||||+.+|++|++.+++.|.
T Consensus        20 ~~~~~~~~~s~~G~R~~nED~~~~~~~~---------------------~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~   78 (304)
T 2i0o_A           20 NEFLASGSSSMQGWRISQEDAHNCILNF---------------------DDQCSFFAVYDGHGGAEVAQYCSLHLPTFLK   78 (304)
T ss_dssp             CSSEEEEEEEEEESSSCCCEEEEEEEEE---------------------ETTEEEEEEEECSSCSHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEeecCCCCCCccCEEEEEecc---------------------CCCeEEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence            5569999999999999999999876422                     1366899999999999999999999999988


Q ss_pred             HHHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhc-----------------cCCCCCCceEEEEEEECCEEEEeecCCc
Q 016186          175 EEWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEA-----------------AAPEMVGSTAVVVVLSGCQIITSNCGDS  237 (394)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~-----------------~~~~~~GtT~~~~~i~~~~l~vanvGDS  237 (394)
                      +.....      ...+.++|+++|..+|+.+.+..                 .....+|||++++++.++++|++|||||
T Consensus        79 ~~~~~~------~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDS  152 (304)
T 2i0o_A           79 TVEAYG------RKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDS  152 (304)
T ss_dssp             HSHHHH------TTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSC
T ss_pred             hhhhcc------cccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCc
Confidence            754211      12457789999999999876431                 1134599999999999999999999999


Q ss_pred             eEEEEeCCeeeecCCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCC---------CCcccCCeeEEE
Q 016186          238 RAVLCRGTETIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLR---------PCIIPVPEITFT  308 (394)
Q Consensus       238 R~yl~r~g~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k---------~~v~~~P~i~~~  308 (394)
                      |+|++|+|++++||+||++.++.|+.||...||.+..  .+|+++.+.+||+||+..+|         ++|+++|++..+
T Consensus       153 Ra~l~r~g~~~~LT~DH~~~~~~e~~rI~~~gg~v~~--~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~  230 (304)
T 2i0o_A          153 RCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTL--DGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKI  230 (304)
T ss_dssp             EEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCBCT--TSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEE
T ss_pred             EEEEEECCEEEEcCCCcCCcCHHHHHHHHhCCCEEEe--CCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEE
Confidence            9999999999999999999999999999999998863  36899999999999998876         357899999999


Q ss_pred             eecCCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHh------CCCCCCeEEEEEE
Q 016186          309 TRTDEDECLILASDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYG------RNSSDNISIIVVD  382 (394)
Q Consensus       309 ~~~~~~d~llL~SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~------~g~~DNiTvIVv~  382 (394)
                      .+.+.+.|||||||||||+|++++|+++++..+..        ...+++.+|+.|++.|+.      +++.||||||||+
T Consensus       231 ~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~--------~~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~  302 (304)
T 2i0o_A          231 TVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINK--------PGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQ  302 (304)
T ss_dssp             ECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTS--------TTCCHHHHHHHHHHHHC------------CEEEEEEE
T ss_pred             EcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhh--------cCCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEE
Confidence            88876678899999999999999999999875321        136889999999999986      4689999999999


Q ss_pred             cC
Q 016186          383 LK  384 (394)
Q Consensus       383 l~  384 (394)
                      |+
T Consensus       303 ~~  304 (304)
T 2i0o_A          303 FK  304 (304)
T ss_dssp             EC
T ss_pred             eC
Confidence            85


No 5  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00  E-value=1.9e-49  Score=391.90  Aligned_cols=261  Identities=37%  Similarity=0.586  Sum_probs=222.6

Q ss_pred             CcceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           96 KGVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        96 ~~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      ..+.||+++++|+|..|||++++..++..                  ...+..||+|||||||+.+|++|++.+++.|.+
T Consensus        20 ~~l~~g~~s~~G~R~~nEDa~~~~~~~~~------------------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~   81 (382)
T 1a6q_A           20 NGLRYGLSSMQGWRVEMEDAHTAVIGLPS------------------GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN   81 (382)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETT------------------TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEEecCCCCCCCCceeEEecCCCC------------------CCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHh
Confidence            56999999999999999999988653210                  113568999999999999999999999999875


Q ss_pred             H--HhhhcccchHHHHHHHHHHHHHHHHhHHHHHhcc---CCCCCCceEEEEEEECCEEEEeecCCceEEEEeCCeeeec
Q 016186          176 E--WDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAA---APEMVGSTAVVVVLSGCQIITSNCGDSRAVLCRGTETIPL  250 (394)
Q Consensus       176 ~--~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~L  250 (394)
                      .  +..... ......+..+|.++|..+|+.+.+...   ....+|||+++++|.++++|++||||||+|++|+|++++|
T Consensus        82 ~~~~~~~~~-~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~L  160 (382)
T 1a6q_A           82 NQDFKGSAG-APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFF  160 (382)
T ss_dssp             SHHHHCSSS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEE
T ss_pred             hhhhhccCC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEe
Confidence            2  221110 011345688899999999999987532   2345999999999999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCC---------CCcccCCeeEEEeec-CCCcEEEEE
Q 016186          251 TVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLR---------PCIIPVPEITFTTRT-DEDECLILA  320 (394)
Q Consensus       251 T~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k---------~~v~~~P~i~~~~~~-~~~d~llL~  320 (394)
                      |+||++.++.|+.||...||.+..   .|++|.+++||+||+..+|         ++|+++|++..+.+. +.++|||||
T Consensus       161 T~DHs~~~~~E~~RI~~~gg~v~~---~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLa  237 (382)
T 1a6q_A          161 TQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILA  237 (382)
T ss_dssp             CCCCCTTSHHHHHHHHHTTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEE
T ss_pred             CCCCCCCCHHHHHHHHhcCcEEec---ccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEe
Confidence            999999999999999999998874   7999999999999998876         467899999998888 667899999


Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCcc
Q 016186          321 SDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAKK  387 (394)
Q Consensus       321 SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~~  387 (394)
                      ||||||+|++++|+++++..+.         ...+++.+|+.|++.|+.+|+.||||||||+|....
T Consensus       238 SDGlwd~ls~~ei~~~v~~~~~---------~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~  295 (382)
T 1a6q_A          238 CDGIWDVMGNEELCDFVRSRLE---------VTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  295 (382)
T ss_dssp             CHHHHTTSCHHHHHHHHHHHHT---------TCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             ccCccCCCChHHHHHHHHHHHh---------cCCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCCC
Confidence            9999999999999999987532         236789999999999999999999999999998654


No 6  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.8e-49  Score=374.52  Aligned_cols=250  Identities=32%  Similarity=0.492  Sum_probs=216.1

Q ss_pred             cceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEE  176 (394)
Q Consensus        97 ~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~  176 (394)
                      .+.||+++++|+|+.|||++++...                      ..+..+|+|||||||+.+|++|++.+.+.|.+.
T Consensus         7 ~~~~g~~s~~G~R~~nED~~~~~~~----------------------~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~   64 (274)
T 2iq1_A            7 LENVGCASQIGKRKENEDRFDFAQL----------------------TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDL   64 (274)
T ss_dssp             GGGCEEEEECCSSSSCCEEEEEEEC----------------------SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEecccCCCCccceEEEeeC----------------------CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence            3679999999999999999988641                      246789999999999999999999999999876


Q ss_pred             HhhhcccchHHHHHHHHHHHHHHHHhHHHHHhcc-----CCCCCCceEEEEEEEC-CEEEEeecCCceEEEEeCCeeeec
Q 016186          177 WDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAA-----APEMVGSTAVVVVLSG-CQIITSNCGDSRAVLCRGTETIPL  250 (394)
Q Consensus       177 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~-----~~~~~GtT~~~~~i~~-~~l~vanvGDSR~yl~r~g~~~~L  250 (394)
                      +...       ..+..+|.++|..+|+.+.+...     ....+|||++++++.+ .++|++||||||+|++|+|++++|
T Consensus        65 ~~~~-------~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~l  137 (274)
T 2iq1_A           65 LPKE-------KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKL  137 (274)
T ss_dssp             TTTC-------CCHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEEC
T ss_pred             hccc-------ccHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeEC
Confidence            5431       23567899999999999987642     1234999999999985 699999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHcCCeEeecCC--ccccCcccccccccccCCCCC-cccCCeeEEEeecCC-CcEEEEEcCCCCC
Q 016186          251 TVDQKPDRQDELERIEGAGGRVINWNG--ARVFGVLAMSRAIGDRYLRPC-IIPVPEITFTTRTDE-DECLILASDGLWD  326 (394)
Q Consensus       251 T~DH~~~~~~e~~ri~~~gg~v~~~~~--~rv~g~l~ltRalGd~~~k~~-v~~~P~i~~~~~~~~-~d~llL~SDGlwd  326 (394)
                      |+||++..+.|+.||++.+|.+...+.  .|+++.+.+||+||+..+|+. ++.+|++..+.+.+. ++|||||||||||
T Consensus       138 T~DH~~~~~~E~~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d  217 (274)
T 2iq1_A          138 TIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINF  217 (274)
T ss_dssp             CCCCCTTSHHHHHHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHT
T ss_pred             CCCCCCcCHHHHHHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCccc
Confidence            999999999999999999998876332  367899999999999998874 889999998888764 5799999999999


Q ss_pred             CCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCcch
Q 016186          327 VMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAKKK  388 (394)
Q Consensus       327 ~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~~~  388 (394)
                      ++++++|.+++...             .+++++|+.|++.|+.+|+.||||||||+|....+
T Consensus       218 ~l~~~ei~~~~~~~-------------~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~~  266 (274)
T 2iq1_A          218 MVNSQEICDFVNQC-------------HDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGK  266 (274)
T ss_dssp             TCCHHHHHHHHHTS-------------SSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC--
T ss_pred             CCCHHHHHHHHHHc-------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCC
Confidence            99999999998753             68999999999999999999999999999986643


No 7  
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00  E-value=2.3e-48  Score=376.78  Aligned_cols=263  Identities=26%  Similarity=0.349  Sum_probs=212.2

Q ss_pred             cceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEE  176 (394)
Q Consensus        97 ~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~  176 (394)
                      .+.||+++++|+|+.|||++++..+...                  ...+..||+|||||||+.+|++|++++++.|.+.
T Consensus        21 ~~~~~~~s~~G~R~~nED~~~~~~~~~~------------------~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~   82 (324)
T 2i44_A           21 AFDAAIFTDIGGRKHQEDRFTLCPQLVP------------------GRDDCAFFGVFDGTVGDFASENVKDLVVPQLISS   82 (324)
T ss_dssp             TEEEEEEEECTTSSSCCEEEEEESCCST------------------TCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTC
T ss_pred             ceEEEEEECCCCCCccCCeEEEEecCCC------------------CCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhh
Confidence            4889999999999999999998764321                  1356789999999999999999999999999763


Q ss_pred             --Hhhh------ccc-----chHHHHHHHHHHHHHHHHhHHHHHhccC--CCCCCceEEEEEEECCEEEEeecCCceEEE
Q 016186          177 --WDRE------RVC-----SDWQRRWEVAFSSGFERTDNEVLTEAAA--PEMVGSTAVVVVLSGCQIITSNCGDSRAVL  241 (394)
Q Consensus       177 --~~~~------~~~-----~~~~~~~~~~l~~a~~~~~~~l~~~~~~--~~~~GtT~~~~~i~~~~l~vanvGDSR~yl  241 (394)
                        +...      ..+     ......+..+|.++|..+|+.+.+....  ....|+|.+++++.++++|+|||||||+|+
T Consensus        83 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l  162 (324)
T 2i44_A           83 PAWQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAM  162 (324)
T ss_dssp             HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEE
T ss_pred             hHHHHHHHHhhccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEccCceEEE
Confidence              3210      000     0113456889999999999999876432  222444444555899999999999999999


Q ss_pred             EeC---C-eeeecCCCCCCCCHHHHHHHHHcCCeEeec-----CCccccCcccccccccc----cCC----------CCC
Q 016186          242 CRG---T-ETIPLTVDQKPDRQDELERIEGAGGRVINW-----NGARVFGVLAMSRAIGD----RYL----------RPC  298 (394)
Q Consensus       242 ~r~---g-~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~-----~~~rv~g~l~ltRalGd----~~~----------k~~  298 (394)
                      +|+   | ++++||+||++.++.|+.||.+.||.+...     .+.+..|.++++|+||+    ..+          +++
T Consensus       163 ~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~  242 (324)
T 2i44_A          163 GVETPNGLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYG  242 (324)
T ss_dssp             EEEETTEEEEEESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTT
T ss_pred             EeccCCCceEEECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCe
Confidence            997   7 899999999999999999999999998432     22356789999999999    333          245


Q ss_pred             cccCCeeEEEeecCCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHH--HHHHHHHHHHhCCCCCCe
Q 016186          299 IIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQV--VADNLTEIAYGRNSSDNI  376 (394)
Q Consensus       299 v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~--~a~~L~~~A~~~g~~DNi  376 (394)
                      ++++|++..+.+.+.++|||||||||||+|++++|++++...+.         ...++++  +|+.|++.|+.+|+.|||
T Consensus       243 v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~---------~~~~~~~~~~a~~L~~~A~~~g~~DNi  313 (324)
T 2i44_A          243 LSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQ---------EGRNPAQALVEMTLAEQQSRNQSADNI  313 (324)
T ss_dssp             CBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHH---------TTCCHHHHHHHHHHHHHHHTTCCCCCE
T ss_pred             EeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHh---------cCCCHHHHHHHHHHHHHHHhcCCCCCC
Confidence            78999999888877555999999999999999999999987643         1257888  999999999999999999


Q ss_pred             EEEEEEcCCc
Q 016186          377 SIIVVDLKAK  386 (394)
Q Consensus       377 TvIVv~l~~~  386 (394)
                      |||||+|+++
T Consensus       314 Tvivv~~~~~  323 (324)
T 2i44_A          314 TAMTVFFKKT  323 (324)
T ss_dssp             EEEEEEEC--
T ss_pred             EEEEEEeeCC
Confidence            9999999754


No 8  
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00  E-value=3.6e-48  Score=384.21  Aligned_cols=252  Identities=32%  Similarity=0.497  Sum_probs=217.7

Q ss_pred             ceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHHH
Q 016186           98 VTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEEW  177 (394)
Q Consensus        98 ~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~~  177 (394)
                      +.+|+++++|+|..|||++++..                      ...+..+|+|||||||+.+|++|++.+++.|.+.+
T Consensus       122 ~~~g~~s~~G~R~~NED~~~~~~----------------------~~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~  179 (389)
T 4da1_A          122 ENVGCASQIGKRKENEDRFDFAQ----------------------LTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLL  179 (389)
T ss_dssp             GGCEEEEECTTSSSCCEEEEEEE----------------------CSSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHT
T ss_pred             eeEEEecCCCCCCCCcceeeeee----------------------cCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence            66889999999999999999864                      12467899999999999999999999999998876


Q ss_pred             hhhcccchHHHHHHHHHHHHHHHHhHHHHHhccC-----CCCCCceEEEEEEECC-EEEEeecCCceEEEEeCCeeeecC
Q 016186          178 DRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAA-----PEMVGSTAVVVVLSGC-QIITSNCGDSRAVLCRGTETIPLT  251 (394)
Q Consensus       178 ~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~-----~~~~GtT~~~~~i~~~-~l~vanvGDSR~yl~r~g~~~~LT  251 (394)
                      ...       ..+..+|..+|..+|+.+.+....     ...+|||++++++.++ ++|+|||||||+|++|+|++++||
T Consensus       180 ~~~-------~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT  252 (389)
T 4da1_A          180 PKE-------KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLT  252 (389)
T ss_dssp             TTC-------CCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECC
T ss_pred             ccc-------cCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeC
Confidence            542       235677999999999999875422     2238999999999876 999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHcCCeEeec--CCccccCcccccccccccCCCCC-cccCCeeEEEeecCC-CcEEEEEcCCCCCC
Q 016186          252 VDQKPDRQDELERIEGAGGRVINW--NGARVFGVLAMSRAIGDRYLRPC-IIPVPEITFTTRTDE-DECLILASDGLWDV  327 (394)
Q Consensus       252 ~DH~~~~~~e~~ri~~~gg~v~~~--~~~rv~g~l~ltRalGd~~~k~~-v~~~P~i~~~~~~~~-~d~llL~SDGlwd~  327 (394)
                      +||++.++.|+.||.+.||.+...  ...|+++.+.+||+||+..+|+. +...|++..+.+... ++|||||||||||+
T Consensus       253 ~DHs~~~~~E~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~  332 (389)
T 4da1_A          253 IDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFM  332 (389)
T ss_dssp             CCCCTTSHHHHHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTT
T ss_pred             CCCCCCCHHHHHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccC
Confidence            999999999999999999988642  23588899999999999998875 899999999888754 78999999999999


Q ss_pred             CCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCcchhhh
Q 016186          328 MTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAKKKRQQ  391 (394)
Q Consensus       328 l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~~~~~~  391 (394)
                      |++++|++++...             .+++++|+.|++.|+.+|+.||||||||+|..+++.+.
T Consensus       333 l~~~ei~~il~~~-------------~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~~  383 (389)
T 4da1_A          333 VNSQEICDFVNQC-------------HDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKYKN  383 (389)
T ss_dssp             CCHHHHHHHHHHS-------------SSHHHHHHHHHHHHHHHTCCSCEEEEEEEECCC-----
T ss_pred             CCHHHHHHHHHhc-------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCCCCc
Confidence            9999999999764             68999999999999999999999999999998876543


No 9  
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00  E-value=5.3e-48  Score=379.37  Aligned_cols=254  Identities=28%  Similarity=0.410  Sum_probs=212.9

Q ss_pred             cceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEE  176 (394)
Q Consensus        97 ~~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~  176 (394)
                      .+.|+.++++|+|..|||++++..++.                   ...+..||+|||||||..++++|++.++..|.+.
T Consensus        12 ~~~~~~~s~~G~R~~nED~~~v~~~~~-------------------~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~   72 (364)
T 2isn_A           12 YTTTVAATMLGRRPTDEDAILVSAPAT-------------------SRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKL   72 (364)
T ss_dssp             TEEEEEEEECTTSSSCCEEEEEECC-----------------------CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEEcCCCCCcCCCeeEEeccCC-------------------CCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHh
Confidence            378999999999999999999876432                   1246789999999999999999999999887542


Q ss_pred             HhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEEC------------------------------
Q 016186          177 WDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLSG------------------------------  226 (394)
Q Consensus       177 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~~------------------------------  226 (394)
                      .    ..      ....|+++|..+|+.+.+.......+|||++++++.+                              
T Consensus        73 ~----~~------~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~  142 (364)
T 2isn_A           73 S----EF------TFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLI  142 (364)
T ss_dssp             S----SC------CHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHH
T ss_pred             h----cc------cHHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhh
Confidence            1    00      1356889999999999876555556999999998852                              


Q ss_pred             ------------------------------CEEEEeecCCceEEEE-eCCeeeecCCCCCCCCHHHHHHHHHcCCeEeec
Q 016186          227 ------------------------------CQIITSNCGDSRAVLC-RGTETIPLTVDQKPDRQDELERIEGAGGRVINW  275 (394)
Q Consensus       227 ------------------------------~~l~vanvGDSR~yl~-r~g~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~  275 (394)
                                                    .++|+|||||||+|++ |+|++++||+||++.++.|+.||.+.||.+...
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~  222 (364)
T 2isn_A          143 QEEEEAEHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETF  222 (364)
T ss_dssp             HHHHHC-----CCSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEES
T ss_pred             hhhhhcccccccccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecC
Confidence                                          3899999999999999 689999999999999999999999999988765


Q ss_pred             CCccccCcccccccccccCCC---------CCcccCCeeEEEeecCCCcEEEEEcCCCCCCCC--HHHHHHHHHHHHHhh
Q 016186          276 NGARVFGVLAMSRAIGDRYLR---------PCIIPVPEITFTTRTDEDECLILASDGLWDVMT--NEEVGEVARRLLRRR  344 (394)
Q Consensus       276 ~~~rv~g~l~ltRalGd~~~k---------~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~--~~ei~~iv~~~l~~~  344 (394)
                      ...|+++.|++|||||+..+|         ++++++|++..+.+.+ +||||||||||||+++  ++++.+++...+.  
T Consensus       223 ~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~--  299 (364)
T 2isn_A          223 DVPRVDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALS-SDLLLLACDGVYEPSGMDWAYVRDLTVAEMQ--  299 (364)
T ss_dssp             SSEEETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECT-TCEEEEECHHHHCSSSCCHHHHHHHHHHHHH--
T ss_pred             CCcccCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCC-CCEEEEEcCCCCCCCCCCHHHHHHHHHHHHh--
Confidence            456888999999999999876         4678999999888775 6799999999999976  8899888765421  


Q ss_pred             hhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCcch
Q 016186          345 RRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAKKK  388 (394)
Q Consensus       345 ~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~~~  388 (394)
                            ....+++++|+.|++.|+.+|+.||||||||+|.....
T Consensus       300 ------~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~  337 (364)
T 2isn_A          300 ------RSKGDLEEVAARVMDYAYDMNSQDNISVMLVAFHNQEV  337 (364)
T ss_dssp             ------HTTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSCC
T ss_pred             ------hcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEcCCCCC
Confidence                  12257899999999999999999999999999986643


No 10 
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00  E-value=3.5e-48  Score=381.94  Aligned_cols=252  Identities=22%  Similarity=0.281  Sum_probs=210.9

Q ss_pred             CcceEEEeecccCCCCC-----ceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHH
Q 016186           96 KGVTWGLTSVIGRRREM-----EDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMH  170 (394)
Q Consensus        96 ~~~~~g~~s~~G~R~~n-----ED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~  170 (394)
                      ..+.||+++++|+|+.|     ||++++...+.                   ...+..||+|||||||+.+|++|++.++
T Consensus        11 ~~~~~~~~s~~G~R~~~ED~~neD~~~~~~~~~-------------------~~~~~~lf~V~DGhGG~~aa~~as~~l~   71 (377)
T 3d8k_A           11 GRTVCASATSRNRRPTSESPHSDDVVVVEGMLR-------------------GRPETRVHAMFDGFQGRHSAMWLAQNVM   71 (377)
T ss_dssp             HHHHHHHTTTCEEEEEECC---CEEEEEEEECS-------------------SCTTEEEEEEEEBSSSSHHHHHHHHHHH
T ss_pred             CcEEEEEEEccCCCCccccchhcceEEEecccC-------------------CCCCeEEEEEEcCCCcHHHHHHHHHHHH
Confidence            34788999999999876     45555543221                   1346789999999999999999999999


Q ss_pred             HHHHHHHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEE-------------------------
Q 016186          171 EVIAEEWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLS-------------------------  225 (394)
Q Consensus       171 ~~l~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~-------------------------  225 (394)
                      ..|.+...          ...++|+++|.++|+.+.+...   .+|||++++++.                         
T Consensus        72 ~~l~~~~~----------~~~~al~~af~~~d~~l~~~~~---~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~  138 (377)
T 3d8k_A           72 NYLNDLRD----------VNEEEITRQFERMDGDLRAANL---PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTS  138 (377)
T ss_dssp             HHHTTCSS----------SSHHHHHHHHHHHHHHHHHHTC---CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCC
T ss_pred             HHHHHhcc----------cHHHHHHHHHHHHHHHHHhccc---CCCCceEEEEEeccccccccccccccccccccccccc
Confidence            98865321          1256799999999999988753   489999998884                         


Q ss_pred             --------------------------CCEEEEeecCCceEEEEeCCeeeecCCCCCCCCHHHHHHHHHcCCeEeecCCc-
Q 016186          226 --------------------------GCQIITSNCGDSRAVLCRGTETIPLTVDQKPDRQDELERIEGAGGRVINWNGA-  278 (394)
Q Consensus       226 --------------------------~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~-  278 (394)
                                                ++++|||||||||+|++|+|++++||+||++.++.|+.||.+.|+.+...++. 
T Consensus       139 ~~~~~g~ta~a~vali~~~~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~  218 (377)
T 3d8k_A          139 VAEALGGPLMPVVAMNFRRDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGEL  218 (377)
T ss_dssp             HHHHSSCCCCCCEEECGGGCGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSE
T ss_pred             cccccccccccceeeecccccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcE
Confidence                                      14899999999999999999999999999999999999999999998754554 


Q ss_pred             cccCcccccccccccCCC---------CCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHhhhhccc
Q 016186          279 RVFGVLAMSRAIGDRYLR---------PCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVARRLLRRRRRSLL  349 (394)
Q Consensus       279 rv~g~l~ltRalGd~~~k---------~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~ei~~iv~~~l~~~~~~~~  349 (394)
                      |++|.|++||+|||..+|         ++++++|++..+.+.+ +|+||||||||||+|+++++++++...+        
T Consensus       219 rv~G~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~-~D~llL~SDGl~d~ls~~e~v~~v~~~~--------  289 (377)
T 3d8k_A          219 LLGGVVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYP-GDDIVAGTAGAFAHFRSHAAIAAAIALY--------  289 (377)
T ss_dssp             EETTTBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECT-TCEEEEECGGGGCSCSSHHHHHHHHTTS--------
T ss_pred             EEcCceecceeecChhhhcccccccccCccccCCcEEEEEcCC-CCEEEEEECCcccCCCcHHHHHHHHHHh--------
Confidence            899999999999999887         5789999999988876 6789999999999999999887654310        


Q ss_pred             ccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCcch
Q 016186          350 VDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAKKK  388 (394)
Q Consensus       350 ~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~~~  388 (394)
                      .....+++.+|+.|++.|+.+|+.||||||||+|...+.
T Consensus       290 ~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~  328 (377)
T 3d8k_A          290 PVSPETVLDAAKAMVVNAKRRKVTKNISTFVRHLPESRT  328 (377)
T ss_dssp             CCCGGGHHHHHHHHHHTTTTSSCCSCCCEEEEECCSSCC
T ss_pred             hccCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEecCCcc
Confidence            111257899999999999999999999999999987654


No 11 
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00  E-value=2.6e-48  Score=386.42  Aligned_cols=255  Identities=22%  Similarity=0.316  Sum_probs=214.1

Q ss_pred             cceEEEeecccCCC--------CCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHH
Q 016186           97 GVTWGLTSVIGRRR--------EMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAER  168 (394)
Q Consensus        97 ~~~~g~~s~~G~R~--------~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~  168 (394)
                      .+.+|+++++|.|.        .|||++++..                      ...+..||||||||||+.+|++|+++
T Consensus        26 ~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~----------------------~~~~~~lf~V~DGhGG~~aa~~as~~   83 (401)
T 2j4o_A           26 LSGVGSASNRSYSADGKGTESHPPEDSWLKFR----------------------SENNCFLYGVFNGYDGNRVTNFVAQR   83 (401)
T ss_dssp             TEEEEEECCEEECSSSSCEECCCCCEEEEEEE----------------------ETTTEEEEEEEEEESSSHHHHHHHHH
T ss_pred             cCceeEEecccccccccccCCCCCCceEEEec----------------------CCCCeEEEEEEcCCCCHHHHHHHHHH
Confidence            48899999999988        5999998864                      12467899999999999999999999


Q ss_pred             HHHHHHHH-HhhhcccchHHHHHHHHHHHHHHHHhHHHHHhcc-------------------------------------
Q 016186          169 MHEVIAEE-WDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAA-------------------------------------  210 (394)
Q Consensus       169 ~~~~l~~~-~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~-------------------------------------  210 (394)
                      ++..|.+. +...    .....+.++|+++|..+|+.+.+...                                     
T Consensus        84 l~~~l~~~~~~~~----~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  159 (401)
T 2j4o_A           84 LSAELLLGQLNAE----HAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLE  159 (401)
T ss_dssp             HHHTTSSSSCCTT----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhcc----cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhccc
Confidence            99887542 2111    12345788899999999888765310                                     


Q ss_pred             CCCCCCceEEEEEEECCEEEEeecCCceEEEEeCC----eeeecCCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccc
Q 016186          211 APEMVGSTAVVVVLSGCQIITSNCGDSRAVLCRGT----ETIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAM  286 (394)
Q Consensus       211 ~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g----~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~l  286 (394)
                      ....+|||+++++|.++++|||||||||+|++|++    ++++||+||++.++.|+.||.+.|+.+..+...|++|.|++
T Consensus       160 ~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~v  239 (401)
T 2j4o_A          160 REISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQES  239 (401)
T ss_dssp             HHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCC
T ss_pred             ccCCCccCEEEEEEECCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCccc
Confidence            11248999999999999999999999999999998    99999999999999999999999998654445688999999


Q ss_pred             cccccccCCC--------------CCcccCCeeEE-EeecCCCcEEEEEcCCCCCCC--------CHHHHHHHHHHHHHh
Q 016186          287 SRAIGDRYLR--------------PCIIPVPEITF-TTRTDEDECLILASDGLWDVM--------TNEEVGEVARRLLRR  343 (394)
Q Consensus       287 tRalGd~~~k--------------~~v~~~P~i~~-~~~~~~~d~llL~SDGlwd~l--------~~~ei~~iv~~~l~~  343 (394)
                      ||+|||..+|              ++++++|++.. +.+.+.++|||||||||||+|        ++++|++++...+..
T Consensus       240 tRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~  319 (401)
T 2j4o_A          240 TRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAK  319 (401)
T ss_dssp             SBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCHhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhc
Confidence            9999998765              57899999995 888877789999999999999        899999999886432


Q ss_pred             hhhcccccCCCcHHHHHHHHHHHHHh-------CCC--------CCCeEEEEEEcCCc
Q 016186          344 RRRSLLVDEVSPAQVVADNLTEIAYG-------RNS--------SDNISIIVVDLKAK  386 (394)
Q Consensus       344 ~~~~~~~~~~~~~~~~a~~L~~~A~~-------~g~--------~DNiTvIVv~l~~~  386 (394)
                               ..+++.+|+.|++.|+.       +|+        .||||||||+|...
T Consensus       320 ---------~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~  368 (401)
T 2j4o_A          320 ---------QTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYP  368 (401)
T ss_dssp             ---------CSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred             ---------CCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCC
Confidence                     25789999999999875       665        89999999999754


No 12 
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00  E-value=3.6e-47  Score=373.22  Aligned_cols=244  Identities=20%  Similarity=0.258  Sum_probs=206.0

Q ss_pred             eecccCCC---CCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH-HHh
Q 016186          103 TSVIGRRR---EMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE-EWD  178 (394)
Q Consensus       103 ~s~~G~R~---~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~-~~~  178 (394)
                      ++.+|+|.   .|||++++..                      ...+..||+|||||||+.+|++|++.++..|.+ .+.
T Consensus        25 ~~~~G~r~~~~~nED~~~~~~----------------------~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~   82 (358)
T 2irm_A           25 YKDDGRRCEGYESRDKKCLCI----------------------SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLN   82 (358)
T ss_dssp             ECSSSCEEECSSCCEEEEEEE----------------------CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTT
T ss_pred             eecCCCCCCCCCCCceEEEEE----------------------CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence            56699976   5999998864                      124678999999999999999999999998865 222


Q ss_pred             hhcccchHHHHHHHHHHHHHHHHhHHHHHhcc--------------------------------------CCCCCCceEE
Q 016186          179 RERVCSDWQRRWEVAFSSGFERTDNEVLTEAA--------------------------------------APEMVGSTAV  220 (394)
Q Consensus       179 ~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~--------------------------------------~~~~~GtT~~  220 (394)
                      ..    .....+.++|+++|..+|+.+.+...                                      ....||||++
T Consensus        83 ~~----~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav  158 (358)
T 2irm_A           83 VC----NTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAV  158 (358)
T ss_dssp             TC----CSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEE
T ss_pred             cc----cchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEE
Confidence            11    12346788899999999998876320                                      1234999999


Q ss_pred             EEEEECCEEEEeecCCceEEEEeC---C--eeeecCCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCC
Q 016186          221 VVVLSGCQIITSNCGDSRAVLCRG---T--ETIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYL  295 (394)
Q Consensus       221 ~~~i~~~~l~vanvGDSR~yl~r~---g--~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~  295 (394)
                      +++|.++++|||||||||+|++|+   |  ++++||+||++.++.|+.||.+.|+.+..   .|+.|.+ +||||||..+
T Consensus       159 ~~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~---~r~~g~l-lTRalGd~~~  234 (358)
T 2irm_A          159 LALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN---FEGVPLY-STRCIGNYLG  234 (358)
T ss_dssp             EEEEESSEEEEEEESSCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG---GTTCTTC-BSBCEECHHH
T ss_pred             EEEEECCEEEEEEcccCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec---cCcCCEE-cccCCcCHHH
Confidence            999999999999999999999998   8  99999999999999999999999998864   6777777 9999999776


Q ss_pred             C--------------CCcccCCeeEE-EeecCCCcEEEEEcCCCCCCCC----------HHHHHHHHHHHHHhhhhcccc
Q 016186          296 R--------------PCIIPVPEITF-TTRTDEDECLILASDGLWDVMT----------NEEVGEVARRLLRRRRRSLLV  350 (394)
Q Consensus       296 k--------------~~v~~~P~i~~-~~~~~~~d~llL~SDGlwd~l~----------~~ei~~iv~~~l~~~~~~~~~  350 (394)
                      |              ++++++|++.. +.+.+.++|||||||||||+|+          +++|+++++..+.        
T Consensus       235 K~~~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~--------  306 (358)
T 2irm_A          235 KAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQ--------  306 (358)
T ss_dssp             HTTGGGSSSSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTT--------
T ss_pred             hccccccccccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHh--------
Confidence            5              37899999994 8888878889999999999999          9999999987532        


Q ss_pred             cCCCcHHHHHHHHHHHHHh---------------CC--CCCCeEEEEEEcCC
Q 016186          351 DEVSPAQVVADNLTEIAYG---------------RN--SSDNISIIVVDLKA  385 (394)
Q Consensus       351 ~~~~~~~~~a~~L~~~A~~---------------~g--~~DNiTvIVv~l~~  385 (394)
                       ...+++.+|+.|++.|+.               +|  +.||||||||+|+.
T Consensus       307 -~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~  357 (358)
T 2irm_A          307 -NQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY  357 (358)
T ss_dssp             -TCCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred             -cCCCHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence             236899999999999976               57  89999999999864


No 13 
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00  E-value=6.3e-47  Score=382.10  Aligned_cols=271  Identities=28%  Similarity=0.411  Sum_probs=208.4

Q ss_pred             ceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHH
Q 016186           98 VTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEE  176 (394)
Q Consensus        98 ~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~  176 (394)
                      ..+++.+.+|. |..|||++.+...+                     ..+..||||||||||+.+|++|+++++.+|...
T Consensus        37 ~v~~~~s~~g~~R~~nED~~~v~~~~---------------------~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~   95 (467)
T 2pnq_A           37 SILGFDSNRLPANAPIEDRRSATTCL---------------------QTRGMLLGVFDGHAGCACSQAVSERLFYYIAVS   95 (467)
T ss_dssp             SEEEEEEEEECCSSSCCEEEEEEEES---------------------SSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeccCCCCCCCCceeeeecc---------------------CCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            45566677766 99999999876421                     125589999999999999999999999999765


Q ss_pred             H------hhh----c---------------cc---------------chHH----------H--HHHHHHHHHHHHHhHH
Q 016186          177 W------DRE----R---------------VC---------------SDWQ----------R--RWEVAFSSGFERTDNE  204 (394)
Q Consensus       177 ~------~~~----~---------------~~---------------~~~~----------~--~~~~~l~~a~~~~~~~  204 (394)
                      +      ...    .               ..               ..|.          .  .+.++|+++|.++|+.
T Consensus        96 l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~  175 (467)
T 2pnq_A           96 LLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDND  175 (467)
T ss_dssp             HCCHHHHHHHHTTTC----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHH
T ss_pred             hcchhhhhhhhhhhhccccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHH
Confidence            2      110    0               00               0011          1  5778999999999999


Q ss_pred             HHHhccC-------------CCCCCceEEEEEEECCEEEEeecCCceEEEEe---CC--eeeecCCCCCCCCHHHHHHHH
Q 016186          205 VLTEAAA-------------PEMVGSTAVVVVLSGCQIITSNCGDSRAVLCR---GT--ETIPLTVDQKPDRQDELERIE  266 (394)
Q Consensus       205 l~~~~~~-------------~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r---~g--~~~~LT~DH~~~~~~e~~ri~  266 (394)
                      |.+....             ...+|||+++++|.++++|||||||||+|+++   +|  .+++||.||++.++.|+.||.
T Consensus       176 i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~  255 (467)
T 2pnq_A          176 ISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLK  255 (467)
T ss_dssp             HHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHH
T ss_pred             HHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHH
Confidence            9765421             22399999999999999999999999999998   47  799999999999999999999


Q ss_pred             HcCCeEe---ecCCccccCcccccccccccCCC---------------------------------CCcccCCeeEEEee
Q 016186          267 GAGGRVI---NWNGARVFGVLAMSRAIGDRYLR---------------------------------PCIIPVPEITFTTR  310 (394)
Q Consensus       267 ~~gg~v~---~~~~~rv~g~l~ltRalGd~~~k---------------------------------~~v~~~P~i~~~~~  310 (394)
                      +.|+...   .+..+|++|.+++||||||..+|                                 |+++++|+|..+.+
T Consensus       256 ~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l  335 (467)
T 2pnq_A          256 LEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRL  335 (467)
T ss_dssp             HTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEEC
T ss_pred             HcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEc
Confidence            9986321   12347999999999999998765                                 46899999999999


Q ss_pred             cCCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHhhhhcc-----------------cc------cCCCcHHHHHHHHHHHH
Q 016186          311 TDEDECLILASDGLWDVMTNEEVGEVARRLLRRRRRSL-----------------LV------DEVSPAQVVADNLTEIA  367 (394)
Q Consensus       311 ~~~~d~llL~SDGlwd~l~~~ei~~iv~~~l~~~~~~~-----------------~~------~~~~~~~~~a~~L~~~A  367 (394)
                      .+.|.|||||||||||+|+++||++++...+.......                 +.      ......+.+|..|++.|
T Consensus       336 ~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~A  415 (467)
T 2pnq_A          336 RPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHA  415 (467)
T ss_dssp             CTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHH
T ss_pred             CCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHH
Confidence            88888999999999999999999999998763210000                 00      00001256899999999


Q ss_pred             HhCC-----------------------CCCCeEEEEEEcCCcchh
Q 016186          368 YGRN-----------------------SSDNISIIVVDLKAKKKR  389 (394)
Q Consensus       368 ~~~g-----------------------~~DNiTvIVv~l~~~~~~  389 (394)
                      +.++                       .+||||||||+|....-.
T Consensus       416 l~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~~~~~  460 (467)
T 2pnq_A          416 VGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVG  460 (467)
T ss_dssp             HC-------------------------CCSCEEEEEEEECHHHHH
T ss_pred             hcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCchHhh
Confidence            9875                       489999999999865433


No 14 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00  E-value=1.8e-42  Score=322.92  Aligned_cols=241  Identities=20%  Similarity=0.274  Sum_probs=196.1

Q ss_pred             cceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        97 ~~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      .|.|++.+++|+ |+.|||++++...                      ..+..+|+|||||||+.+|++|++.+++.|.+
T Consensus         5 ~~~~~~~s~~G~~r~~neD~~~~~~~----------------------~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~   62 (250)
T 2pk0_A            5 YMEISLLTDIGQRRSNNQDFINQFEN----------------------KAGVPLIILADGMGGHRAGNIASEMTVTDLGS   62 (250)
T ss_dssp             CEEEEEEEECCTTCSCCCEEEEEEEC----------------------TTCCEEEEEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCCCCCCcCCCceEeccC----------------------CCCcEEEEEEeCCCCcHHHHHHHHHHHHHHHH
Confidence            489999999999 9999999998762                      13568999999999999999999999999984


Q ss_pred             HHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccC--CCCCCceEEEEEEECCEEEEeecCCceEEEEeCCeeeecCCC
Q 016186          176 EWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAA--PEMVGSTAVVVVLSGCQIITSNCGDSRAVLCRGTETIPLTVD  253 (394)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~--~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~D  253 (394)
                      .+......  ....+...|.++|..+|+.+.+....  ...+|||++++++.+++++++|+||||+|++|+|++++||.|
T Consensus        63 ~~~~~~~~--~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~d  140 (250)
T 2pk0_A           63 DWAETDFS--ELSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSD  140 (250)
T ss_dssp             HHTTCCCC--SHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCC
T ss_pred             HHhhcccC--ChhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCC
Confidence            44322110  13456788999999999999876432  234899999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHHHH
Q 016186          254 QKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEV  333 (394)
Q Consensus       254 H~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~ei  333 (394)
                      |++.++     +.+.|. +...+.....+.+.+||+||+..     ...|++..+.+.+ +++||||||||||+++++++
T Consensus       141 h~~~~~-----~~~~g~-i~~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~~i  208 (250)
T 2pk0_A          141 HSLVNE-----LVKAGQ-LTEEEAASHPQKNIITQSIGQAN-----PVEPDLGVHLLEE-GDYLVVNSDGLTNMLSNADI  208 (250)
T ss_dssp             CBHHHH-----HHHTTS-SCHHHHHTCCSCCCBSCCBSCSS-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHHH
T ss_pred             CCHHHH-----HHHcCC-CCHHHHHhCCCcceEEeecCCCC-----CccceEEEEEcCC-CCEEEEECCCCCCCcCHHHH
Confidence            997543     233332 22111123346678999999975     6789998777665 78999999999999999999


Q ss_pred             HHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCc
Q 016186          334 GEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLKAK  386 (394)
Q Consensus       334 ~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~~~  386 (394)
                      .+++.+.             .+++++|+.|++.|+.+++.||||||||++.+.
T Consensus       209 ~~~~~~~-------------~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~~  248 (250)
T 2pk0_A          209 ATVLTQE-------------KTLDDKNQDLITLANHRGGLDNITVALVYVESE  248 (250)
T ss_dssp             HHHHTSS-------------SCHHHHHHHHHHHHHHTTCCSCEEEEEEEECC-
T ss_pred             HHHHhcC-------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeCC
Confidence            9988652             589999999999999999999999999999753


No 15 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00  E-value=8.9e-42  Score=315.78  Aligned_cols=229  Identities=21%  Similarity=0.272  Sum_probs=186.0

Q ss_pred             cceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        97 ~~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      .+.|+..+++|+ |+.|||++++..                           .+|+|||||||+.+|++|++.+++.|.+
T Consensus         4 ~~~~~~~s~~G~~r~~nED~~~~~~---------------------------~~~~V~DG~Gg~~~~~~as~~~~~~l~~   56 (237)
T 1txo_A            4 VLRYAARSDRGLVRANNEDSVYAGA---------------------------RLLALADGMGGHAAGEVASQLVIAALAH   56 (237)
T ss_dssp             EEEEEEEEECCSSCSSCCEEEEECS---------------------------SEEEEEEEECTTTHHHHHHHHHHHHHGG
T ss_pred             EEEEEEecCCCCCCCcCCCccccCC---------------------------CEEEEEeCCCCcHHHHHHHHHHHHHHHH
Confidence            488999999997 999999998622                           5999999999999999999999999987


Q ss_pred             HHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccC---CCCCCceEEEEEEECCEEEEeecCCceEEEEeCCeeeecCC
Q 016186          176 EWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAA---PEMVGSTAVVVVLSGCQIITSNCGDSRAVLCRGTETIPLTV  252 (394)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~LT~  252 (394)
                      .+.....     ..+.+.|.++|..+|+.+.+....   ...+|||++++++.+++++++|+||||+|++|+|++++||.
T Consensus        57 ~~~~~~~-----~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~  131 (237)
T 1txo_A           57 LDDDEPG-----GDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITK  131 (237)
T ss_dssp             GGSSCCC-----SCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSC
T ss_pred             HhhhCCc-----hhHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCC
Confidence            6542211     245778899999999988765322   23489999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHHH
Q 016186          253 DQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEE  332 (394)
Q Consensus       253 DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~e  332 (394)
                      ||++.+     ++...|. +.............++|++|+.      ...|++..+.+.+ +++||||||||||++++++
T Consensus       132 dh~~~~-----~~~~~G~-i~~~~~~~~~~~~~~tr~lg~~------~~~p~~~~~~l~~-~d~lvl~SDGl~d~l~~~~  198 (237)
T 1txo_A          132 DDTFVQ-----TLVDEGR-ITPEEAHSHPQRSLIMRALTGH------EVEPTLTMREARA-GDRYLLCSDGLSDPVSDET  198 (237)
T ss_dssp             CCBHHH-----HHHHTTS-SCTTGGGGCTTTTCBCCCBSSS------CCCCEEEEEECCT-TCEEEEECHHHHTTSCHHH
T ss_pred             CCCHHH-----HHHHcCC-CCHHHHhhCccccceeeccCCC------CccceEEEEecCC-CCEEEEECCCCCCCCCHHH
Confidence            999643     3444442 2211111122345699999965      5788988777765 6789999999999999999


Q ss_pred             HHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcC
Q 016186          333 VGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLK  384 (394)
Q Consensus       333 i~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~  384 (394)
                      +.++++.              .+++++|+.|++.|+.+|+.||+|||||+|.
T Consensus       199 i~~~~~~--------------~~~~~~a~~L~~~a~~~g~~DniTvivv~~~  236 (237)
T 1txo_A          199 ILEALQI--------------PEVAESAHRLIELALRGGGPDNVTVVVADLE  236 (237)
T ss_dssp             HHHHHTS--------------SSHHHHHHHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred             HHHHHhc--------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEee
Confidence            9998853              5799999999999999999999999999985


No 16 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00  E-value=5.7e-41  Score=310.82  Aligned_cols=234  Identities=21%  Similarity=0.229  Sum_probs=182.0

Q ss_pred             ceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHH
Q 016186           98 VTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEE  176 (394)
Q Consensus        98 ~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~  176 (394)
                      |.|++.+++|+ |+.|||++ +...                      .... +|+|||||||+.+|++|++.+++.|.+.
T Consensus         1 ~~~~~~s~~G~~r~~neD~~-~~~~----------------------~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~   56 (240)
T 2j82_A            1 MDVAGLTDCGLIRKSNQDAF-YIDE----------------------KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQY   56 (240)
T ss_dssp             CEEEEEEECCSSCSSCCEEE-EECT----------------------TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHH
T ss_pred             CeEEEeCCCCCCCCcCCCcc-EecC----------------------CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHH
Confidence            57999999999 99999999 6541                      1244 9999999999999999999999999876


Q ss_pred             HhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCC---CCCCceEEEEEEE--CCEEEEeecCCceEEEEeCCeeeecC
Q 016186          177 WDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAP---EMVGSTAVVVVLS--GCQIITSNCGDSRAVLCRGTETIPLT  251 (394)
Q Consensus       177 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~---~~~GtT~~~~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT  251 (394)
                      +.....  .+...+...|.++|..+|+.+.+.....   ..+|||++++++.  +++++++|+||||+|++|+|++++||
T Consensus        57 ~~~~~~--~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt  134 (240)
T 2j82_A           57 LETHLE--DLQHDPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQIT  134 (240)
T ss_dssp             HHHHHH--HHTTSHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECS
T ss_pred             HHhccc--ccchhHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEEC
Confidence            544210  0123467789999999999998875432   3489999999999  99999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHH
Q 016186          252 VDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNE  331 (394)
Q Consensus       252 ~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~  331 (394)
                      .||++.++     +.+.|+ +...+.....+.+.+||+||+..     ...|++..+.+.+ +++||||||||||+++++
T Consensus       135 ~dh~~~~~-----~~~~g~-i~~~~~~~~~~~~~ltralG~~~-----~~~p~~~~~~l~~-gd~lll~SDGl~d~l~~~  202 (240)
T 2j82_A          135 SDHTWIAQ-----AVQLGS-LTIEQARQHPWRHVLSQCLGRED-----LSQIDIQPIDLEP-GDRLLLCSDGLTEELTDD  202 (240)
T ss_dssp             CCCBHHHH-----C-----------------CCCBSCCBSCTT-----CCCCEEEEEECCT-TCEEEEECHHHHTTSCHH
T ss_pred             CCCcHHHH-----HHHcCC-CCHHHHhcCCCcCeEeecCCCCC-----ceeEEEEEEeeCC-CCEEEEECCCCCCCCCHH
Confidence            99997542     223332 22212223456678999999974     6789998776665 778999999999999999


Q ss_pred             HHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEc
Q 016186          332 EVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDL  383 (394)
Q Consensus       332 ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l  383 (394)
                      ++.+++. .             .+++++|+.|++.|+.+++.||||||||++
T Consensus       203 ~i~~~l~-~-------------~~~~~~a~~l~~~a~~~g~~DniTvivv~~  240 (240)
T 2j82_A          203 VISIYLS-E-------------PNVQKAAAALVDAAKTHGGRDNVTVVVISV  240 (240)
T ss_dssp             HHHHHHT-C-------------SSHHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred             HHHHHHc-c-------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence            9999876 2             689999999999999999999999999975


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00  E-value=2.9e-39  Score=298.38  Aligned_cols=224  Identities=19%  Similarity=0.219  Sum_probs=181.9

Q ss_pred             cceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        97 ~~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      .+.|+..+++|+ |+.|||++++ .                          ..+|+|||||||+  |+.||+.+.+.+.+
T Consensus         5 ~~~~~~~s~~G~~r~~neD~~~~-~--------------------------~~~~~V~DG~Gg~--G~~as~~~~~~l~~   55 (234)
T 2jfr_A            5 VLSAATATDQGPVRENNQDACLA-D--------------------------GILYAVADGFGAR--GHHASATALKTLSA   55 (234)
T ss_dssp             EEEEEEEEECCSSCSSCCEEEEE-E--------------------------TTEEEEEEEESTT--HHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCCCCCCcCCCccee-C--------------------------CcEEEEEeCCCcc--HHHHHHHHHHHHHH
Confidence            488999999999 9999999966 2                          1599999999999  78888888877777


Q ss_pred             HHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCC-CCCceEEEEEEECCE---EEEeecCCceEEEEeCCeeeecC
Q 016186          176 EWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPE-MVGSTAVVVVLSGCQ---IITSNCGDSRAVLCRGTETIPLT  251 (394)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~-~~GtT~~~~~i~~~~---l~vanvGDSR~yl~r~g~~~~LT  251 (394)
                      .+....       . ...|.++|..+|+.+.+...... .+|||++++++.+++   ++++|+||||+|++|+|++++||
T Consensus        56 ~~~~~~-------~-~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt  127 (234)
T 2jfr_A           56 GFAAAP-------D-RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLT  127 (234)
T ss_dssp             HHHHSC-------S-HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECS
T ss_pred             HHhcCC-------c-HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeC
Confidence            654331       1 45688999999999987654322 289999999999998   99999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHH
Q 016186          252 VDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNE  331 (394)
Q Consensus       252 ~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~  331 (394)
                      .||++..     ++.+.|. +...+.....+.+.+||+||+..     ...|++..+.+. ++++||||||||||+++++
T Consensus       128 ~dh~~~~-----~~~~~g~-i~~~~~~~~~~~~~~tralG~~~-----~~~~~~~~~~l~-~gd~lll~SDGl~d~~~~~  195 (234)
T 2jfr_A          128 DDHSVAG-----ELVRMGE-ITRHEARWHPQRHLLTRALGIGP-----HIGPDVFGIDCG-PGDRLLISSDGLFAAADEA  195 (234)
T ss_dssp             CCCBHHH-----HHHHTTS-SCHHHHTTCTTTTCBSCCBSSSS-----CCCCEEEECCCC-TTCEEEEECGGGGTTSCHH
T ss_pred             CCCCHHH-----HHHHcCC-CCHHHHhcCcccceeeecCcCCC-----CceeEEEEEecC-CCCEEEEECCCCccccCHH
Confidence            9999643     3334442 22111122345678999999874     678888777665 4788999999999999999


Q ss_pred             HHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEc
Q 016186          332 EVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDL  383 (394)
Q Consensus       332 ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l  383 (394)
                      ++.+++ ..             .+++.+|+.|++.|+.+++.||+|||||++
T Consensus       196 ~i~~~~-~~-------------~~~~~~a~~l~~~a~~~g~~DniTvivv~~  233 (234)
T 2jfr_A          196 LIVDAA-TS-------------PDPQVAVRRLVEVANDAGGSDNTTVVVIDL  233 (234)
T ss_dssp             HHHHHH-TC-------------SSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred             HHHHHH-cc-------------CCHHHHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence            999988 42             689999999999999999999999999987


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00  E-value=6.3e-37  Score=278.83  Aligned_cols=195  Identities=17%  Similarity=0.155  Sum_probs=151.1

Q ss_pred             CCeEEEEEEcCCCCchHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhcc---CCCCCCceEEE
Q 016186          145 SPIHFFGVYDGHGGSQVAKFCAERMHEVIAEEWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAA---APEMVGSTAVV  221 (394)
Q Consensus       145 ~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~---~~~~~GtT~~~  221 (394)
                      ++..+|+|||||||+.+|++|++.+++.|.+.+.....           +.+++..+|+.+.+...   ....||||+++
T Consensus         8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~-----------~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~   76 (211)
T 3rnr_A            8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS-----------PLDAVLAAQAAVHRWASQGGILGRTGATMAV   76 (211)
T ss_dssp             TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC-----------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEE
T ss_pred             CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC-----------HHHHHHHHHHHHHHHHhhccCCCCcchhhee
Confidence            46789999999999999999999999999988765432           34677778887776532   23349999999


Q ss_pred             EEEE--CCEEEEeecCCceEEEEeCCeeeecCCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCc
Q 016186          222 VVLS--GCQIITSNCGDSRAVLCRGTETIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCI  299 (394)
Q Consensus       222 ~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v  299 (394)
                      +++.  ++++|++||||||+|++|+|++++||+||++.+     ++.+.|.  ..   ........+||+||...     
T Consensus        77 ~~i~~~~~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~-----~~~~~g~--~~---~~~~~~~~ltralG~~~-----  141 (211)
T 3rnr_A           77 AAVNLRDGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSS-----EMVLLGR--GP---VPGPAGEMITSFIGIEN-----  141 (211)
T ss_dssp             EEEETTTTEEEEEEESSCEEEEEETTEEEECCCCCBHHH-----HHHHTTS--CC---CCSHHHHCBSCCBTCSS-----
T ss_pred             eeeeeCCCEEEEEEEccCeEEEEeCCEEEEECCCcHHHH-----HHHHcCC--Ch---hhCCCccEEecccCCCC-----
Confidence            9999  999999999999999999999999999999643     3444443  11   22233457999999874     


Q ss_pred             ccCCee--EEEeecCCCcEEEEEcCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCC--CCCC
Q 016186          300 IPVPEI--TFTTRTDEDECLILASDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRN--SSDN  375 (394)
Q Consensus       300 ~~~P~i--~~~~~~~~~d~llL~SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g--~~DN  375 (394)
                      ...|++  ..+.+ +++|+||||||||||++++++|.+++...             .+    |+.|++.|+.++  +.||
T Consensus       142 ~~~~~~~~~~~~l-~~gd~llL~SDGl~d~~~~~~i~~~l~~~-------------~~----a~~L~~~a~~~g~~~~DN  203 (211)
T 3rnr_A          142 LTEISTSEAPLPL-EAGEGVLVVSDGVYRSLHEDRIAMALSRG-------------SD----ARGILQEVEAQGRPYQDN  203 (211)
T ss_dssp             CCCCEECSSCEEC-CTTCEEEEEEC-----CCTTEEEEEECTT-------------SC----HHHHHHHHHHSCTTSCSS
T ss_pred             CcceeEecceecC-CCCCEEEEEcCCCCCCcCHHHHHHHHhcC-------------Ch----HHHHHHHHHHcCCCCCCc
Confidence            556777  44444 45788999999999999999998877542             22    899999999999  9999


Q ss_pred             eEEEEEEc
Q 016186          376 ISIIVVDL  383 (394)
Q Consensus       376 iTvIVv~l  383 (394)
                      ||||||+|
T Consensus       204 iTvivv~L  211 (211)
T 3rnr_A          204 ATLALVIL  211 (211)
T ss_dssp             CEEEEEEC
T ss_pred             eEEEEEeC
Confidence            99999986


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.88  E-value=3.2e-22  Score=185.11  Aligned_cols=206  Identities=15%  Similarity=0.164  Sum_probs=143.9

Q ss_pred             CcceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHH
Q 016186           96 KGVTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIA  174 (394)
Q Consensus        96 ~~~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~  174 (394)
                      ..+.+|+++..-. +..+.|.|.+..                      ...+..+|+|+||+|+...|.+++..+...|.
T Consensus         6 ~~i~~~~~~~~~p~~~v~GD~y~~~~----------------------~~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~   63 (242)
T 3t91_A            6 YRVSTGAAHAAKGGGLVSGDSYSMME----------------------LGARKYAAAISDGMGNGARAHFESNETIKLLE   63 (242)
T ss_dssp             CEEEEEEEEECTTSCSCCSCEEEEEE----------------------ETTTEEEEEEECC-----CCSEEECHHHHHHH
T ss_pred             EEEEEEeehhcCCccccCCcEEEEEE----------------------eCCCeEEEEEEeeCCCCHHHHHHHHHHHHHHH
Confidence            4578888887655 789999998865                      12355789999999998888888888888877


Q ss_pred             HHHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEE--CCEEEEeecCCceEEEEeCCeeeecCC
Q 016186          175 EEWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLS--GCQIITSNCGDSRAVLCRGTETIPLTV  252 (394)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~  252 (394)
                      ........           +..++..+|+.+....  ...+++|++++++.  +++++++|+||+|+|++|+|++.+|+.
T Consensus        64 ~~~~~~~~-----------~~~~l~~~n~~l~~~~--~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~  130 (242)
T 3t91_A           64 KILESGID-----------EKIAIKTINSILSLRT--TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQA  130 (242)
T ss_dssp             HHHHHTCC-----------HHHHHHHHHHHHTTC------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCC
T ss_pred             HHHHhCCC-----------HHHHHHHHHHHHHhcC--CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecC
Confidence            66543321           4556677888776542  23488999999997  789999999999999999999999876


Q ss_pred             CCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCC---
Q 016186          253 DQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMT---  329 (394)
Q Consensus       253 DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~---  329 (394)
                      ++.                                 .+|-..     ...++...+ ..+.||.|||||||||+.++   
T Consensus       131 ~~~---------------------------------~lG~~~-----~~~~~~~~~-~l~~GD~lll~SDGl~e~~~~~~  171 (242)
T 3t91_A          131 SNL---------------------------------PIGIIN-----EFDVEVVSE-QLKAGDLLIMMSDGIFEGPKHVE  171 (242)
T ss_dssp             C--------------------------------------CCC-----TTCEEEEEE-ECCTTCEEEEECHHHHTCSTTCS
T ss_pred             CCc---------------------------------eeEecC-----CCcceEEEE-EeCCCCEEEEECCCcccCCCccc
Confidence            543                                 233111     122233333 34568999999999999998   


Q ss_pred             --HHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCC-C--CCCeEEEEEEcCCc
Q 016186          330 --NEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRN-S--SDNISIIVVDLKAK  386 (394)
Q Consensus       330 --~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g-~--~DNiTvIVv~l~~~  386 (394)
                        ...+.+++...           ...+++++++.|++.+...+ +  .||+|+|++++...
T Consensus       172 ~~~~~~~~ll~~~-----------~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvv~i~~~~~  222 (242)
T 3t91_A          172 NHDLWMKRKMKGL-----------KTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDHN  222 (242)
T ss_dssp             CHHHHHHHHHHTC-----------CCCCHHHHHHHHHHHHHHHTTSCCCSCEEEEEEEEEEC
T ss_pred             chHHHHHHHHHHh-----------cCCCHHHHHHHHHHHHHHHcCCCCCCceEEEEEEEecC
Confidence              45555554421           23678999999999998765 3  69999999999754


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.87  E-value=1.1e-20  Score=175.12  Aligned_cols=204  Identities=16%  Similarity=0.156  Sum_probs=151.4

Q ss_pred             cceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        97 ~~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      .+.+++++.... +..+.|.|.+..                      ...+..+|+|+||+|+...|.+++..+...+.+
T Consensus        10 ~~~~~~~~~~~~~~~vgGD~y~~~~----------------------~~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~   67 (242)
T 3pu9_A           10 TIELAVAKTHKFGTRESGDTVELVE----------------------RPGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVR   67 (242)
T ss_dssp             EEEEEEEEECCTTCSSCSEEEEEEE----------------------CTTSEEEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEecccCccccCCceEEEEE----------------------eCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence            366777776655 688899998865                      123556799999999999999999998888877


Q ss_pred             HHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEE--CCEEEEeecCCceEEEEeCCeeeecCCC
Q 016186          176 EWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLS--GCQIITSNCGDSRAVLCRGTETIPLTVD  253 (394)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~D  253 (394)
                      .+.....           +..++..+|+.+....  ...+.+|+++++++  .++++++|+||+++|++++|++.+|+.+
T Consensus        68 ~~~~~~~-----------~~~~l~~~n~~l~~~~--~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~  134 (242)
T 3pu9_A           68 LLNEGVR-----------DGAAARAAHDFLYAMR--DGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISES  134 (242)
T ss_dssp             HHHTTCC-----------HHHHHHHHHHHHHHHT--TTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCC
T ss_pred             HHHcCCC-----------HHHHHHHHHHHHHhcc--CCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCC
Confidence            6543321           4566778888886654  23478999999986  6799999999999999999999999987


Q ss_pred             CCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCC----
Q 016186          254 QKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMT----  329 (394)
Q Consensus       254 H~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~----  329 (394)
                      |.+                                 +|-..     ...++...+. .++++.||||||||++...    
T Consensus       135 ~~~---------------------------------lG~~~-----~~~~~~~~~~-l~~Gd~lll~TDGl~e~~~~~~~  175 (242)
T 3pu9_A          135 GGR---------------------------------IGIYR-----HTRPRVLEFP-AEPGLTVILVSDGIIGAGGRRGQ  175 (242)
T ss_dssp             CCC---------------------------------BSSCT-----TCCCEEEEEE-CCTTCEEEEECHHHHTTTTTTTC
T ss_pred             Ccc---------------------------------ccccC-----CCCceEEEEE-eCCCCEEEEECcCcccCCCCccc
Confidence            652                                 33211     1233343333 4568999999999998764    


Q ss_pred             ---HHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCC---CCCCeEEEEEEcCCc
Q 016186          330 ---NEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRN---SSDNISIIVVDLKAK  386 (394)
Q Consensus       330 ---~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g---~~DNiTvIVv~l~~~  386 (394)
                         .+++..++.            ....+++++++.|++.+...+   ..||+|++++++.+.
T Consensus       176 ~~g~~~l~~l~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~DDiTvlvv~~~~~  226 (242)
T 3pu9_A          176 PLEFLATGGRVA------------GPETPAQAIADELLEAALVADDGRAGDDMTVVVLRLRNV  226 (242)
T ss_dssp             CCCHHHHHHHHC------------CTTCCHHHHHHHHHHHHHHHTTTSCSSCEEEEEEEEEEC
T ss_pred             cccHHHHHHHHh------------ccCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEEecC
Confidence               466644321            123678999999999998754   689999999999654


No 21 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.76  E-value=6.2e-17  Score=144.65  Aligned_cols=188  Identities=16%  Similarity=0.145  Sum_probs=136.3

Q ss_pred             cceEEEeecccC-CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           97 GVTWGLTSVIGR-RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        97 ~~~~g~~s~~G~-R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      .+.+|+.+.... +..+.|.|.+..                       .++..+++|+||+|....|..++..+...|.+
T Consensus         3 ~~~~~~~~~p~~~~~v~GD~y~~~~-----------------------~~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~   59 (193)
T 3zt9_A            3 KLEVGIYTRAREGEIACGDACLVKR-----------------------VEGVIFLAVGDGIGHGPEAARAAEIAIASMES   59 (193)
T ss_dssp             CCCEEEEEECCTTCSSCSEEEEEEE-----------------------ETTEEEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEEEEeccCCCCCCCCeEEEEE-----------------------eCCEEEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            367888887765 678899998854                       13568999999999888888888888877765


Q ss_pred             HHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEE--CCEEEEeecCCceEEEEeCCeeeecCCC
Q 016186          176 EWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLS--GCQIITSNCGDSRAVLCRGTETIPLTVD  253 (394)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~yl~r~g~~~~LT~D  253 (394)
                      ..  ..       .    ....+.++|+.+...      .|+|++++.+.  .+++.++|+|+++.|++|++....+...
T Consensus        60 ~~--~~-------~----p~~il~~ln~~l~~~------~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~  120 (193)
T 3zt9_A           60 SM--NT-------G----LVNIFQLCHRELRGT------RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLAT  120 (193)
T ss_dssp             HT--TS-------C----HHHHHHHHHHHHTTS------SCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCB
T ss_pred             cc--cC-------C----HHHHHHHHHHHHhcc------CceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCC
Confidence            31  11       1    344556777777532      47888888887  6799999999999999999877665422


Q ss_pred             CCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHHHH
Q 016186          254 QKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEV  333 (394)
Q Consensus       254 H~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~ei  333 (394)
                      +.                                 .+|...     ...++...+. .++++.|+||||||++.+..+++
T Consensus       121 ~g---------------------------------~lG~~~-----~~~~~~~~~~-l~~gd~l~l~sDGl~e~~~~~~~  161 (193)
T 3zt9_A          121 PG---------------------------------ILGYNY-----PHQLLIAKGS-YQEGDLFLIHSDGIQEGAVPLAL  161 (193)
T ss_dssp             CC---------------------------------BBTTBC-----CSSCCCEEEE-CCTTCEEEEECTTSCTTCSCGGG
T ss_pred             CC---------------------------------ceeccC-----CccceeEEec-cCCCCEEEEECCCCCCccChhhh
Confidence            11                                 123210     1123333333 45689999999999999999887


Q ss_pred             HHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEE
Q 016186          334 GEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVD  382 (394)
Q Consensus       334 ~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~  382 (394)
                      ..++               ..+++++|+.|++.+  .+..||+||+|++
T Consensus       162 ~~~~---------------~~~~~~~a~~l~~~~--~~~~Dd~tvlv~r  193 (193)
T 3zt9_A          162 LANY---------------RLTAEELVRLIGEKY--GRRDDDVAVIVAR  193 (193)
T ss_dssp             GGCT---------------TSCHHHHHHHHHHHH--CCTTSCEEEEEEC
T ss_pred             hchh---------------cCCHHHHHHHHHHHh--CcCCCCeEEEEEC
Confidence            6543               158999999999987  4579999999984


No 22 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.76  E-value=4.6e-17  Score=151.58  Aligned_cols=206  Identities=15%  Similarity=0.038  Sum_probs=131.8

Q ss_pred             ceEEEeecccCCCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHHHH
Q 016186           98 VTWGLTSVIGRRREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAEEW  177 (394)
Q Consensus        98 ~~~g~~s~~G~R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~~~  177 (394)
                      +.+++..... +...-|.|-+..                      ...+..+|+|+||+|+...|.+++..+...+...+
T Consensus        38 ~~~~~~~~p~-~~vgGD~yd~~~----------------------~~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~   94 (255)
T 3f79_A           38 LEFSHRIIPS-LYLSGDFVDYFR----------------------VDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLL   94 (255)
T ss_dssp             EEEEEEEECS-SSSCSEEEEEEE----------------------ETTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEeEh-hhcCceEEeEEE----------------------eCCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence            5555554443 566778875543                      12356899999999988888888888777776554


Q ss_pred             hhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEE--CCEEEEeecCC-ceEEEEeCCeeeecCCCC
Q 016186          178 DRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLS--GCQIITSNCGD-SRAVLCRGTETIPLTVDQ  254 (394)
Q Consensus       178 ~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGD-SR~yl~r~g~~~~LT~DH  254 (394)
                      ........   .....+...+..+|+.+.+.   ...+++|+++++++  .++++++|+|+ ++.|++++|++.+++.+|
T Consensus        95 ~~~~~~~~---~~~~~p~~~l~~ln~~l~~~---~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~  168 (255)
T 3f79_A           95 YESRRNGT---LPEFKPSEVLAHINRGLINT---KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRG  168 (255)
T ss_dssp             HHHTTCCC-------CHHHHHHHHHHHHBTT---BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC--
T ss_pred             Hhhccccc---cccCCHHHHHHHHHHHHHhc---CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCC
Confidence            32110000   01122566778888888753   23489999999995  67999999999 569999999999998776


Q ss_pred             CCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCHHH--
Q 016186          255 KPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTNEE--  332 (394)
Q Consensus       255 ~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~~e--  332 (394)
                      .+                                 +|-..     ....+...+. .++|+.|+||||||++.++.++  
T Consensus       169 ~~---------------------------------lG~~~-----~~~~~~~~~~-l~~gd~lll~TDGl~e~~~~~~~~  209 (255)
T 3f79_A          169 LP---------------------------------VGLFD-----DATYDDRVME-LPPSFSLSLFSDGILDVLPGATLK  209 (255)
T ss_dssp             ------------------------------------CCSS-----CCCCCC---B-CCSSEEEEEECSCCCCCSCC---C
T ss_pred             ce---------------------------------EEEcC-----CCceEEEEEE-ECCCCEEEEECCCcCcccCCCcch
Confidence            53                                 22111     1112222222 3568999999999999998877  


Q ss_pred             -----HHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEEcC
Q 016186          333 -----VGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVDLK  384 (394)
Q Consensus       333 -----i~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~l~  384 (394)
                           +.+++...            ..+++.+++.|+ .+...+..||||+|+|+..
T Consensus       210 ~g~~~l~~~l~~~------------~~~~~~~~~~l~-~~~~~~~~DDiTvl~v~~~  253 (255)
T 3f79_A          210 EKEASLPEQVAAA------------GGTLDGLRQVFG-LANLAEMPDDIALLVLSRN  253 (255)
T ss_dssp             CTTTSSHHHHHHH------------SCSSHHHHHHC------CCSSSCEEEEEEEEC
T ss_pred             hhHHHHHHHHHhc------------CCCHHHHHHHHH-hccCCCCCCCEEEEEEEec
Confidence                 77777653            135677888887 5677889999999999864


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.29  E-value=7e-10  Score=109.70  Aligned_cols=211  Identities=11%  Similarity=0.124  Sum_probs=125.7

Q ss_pred             ceEEEeecccC--CCCCceeEEEecCCccccccCCCCCCCCCCCCCCCCCCeEEEEEEcCCCCchHHHHHHHHHHHHHHH
Q 016186           98 VTWGLTSVIGR--RREMEDAVTVMPGFMSRTCDHVGGCTAPGSRSCGEISPIHFFGVYDGHGGSQVAKFCAERMHEVIAE  175 (394)
Q Consensus        98 ~~~g~~s~~G~--R~~nED~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~V~DG~GG~~~~~~as~~~~~~l~~  175 (394)
                      +.+++.-....  ....=|.|-+...                       .+..+++|+|++|-.-.|.+++..+...|..
T Consensus        36 ~~~~~~y~P~~~~~~vgGD~y~~~~~-----------------------~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~   92 (399)
T 3ke6_A           36 ADIAAEYLVAAEDTAAGGDWFDALAL-----------------------GDRLVLVVGDVVGHGVEAAAVMSQLRTALRM   92 (399)
T ss_dssp             EEEEEEEECSSSSCSCCSEEEEEEEC-----------------------SSEEEEEEEECSSCSHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEEEECCCCCCCCCceEEEEEE-----------------------CCEEEEEEEEecCCCHHHHHHHHHHHHHHHH
Confidence            55555444443  2455688877651                       2378999999999555555666666666665


Q ss_pred             HHhhhcccchHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEEEEE--CCEEEEeecCCceEEEEe-CCeeeecCC
Q 016186          176 EWDRERVCSDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVVVLS--GCQIITSNCGDSRAVLCR-GTETIPLTV  252 (394)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~yl~r-~g~~~~LT~  252 (394)
                      .......           ....+..+|+ +...  ....+++|+++++++  .+++.++|+|..+.|+++ +|++..+..
T Consensus        93 ~~~~~~~-----------p~~il~~ln~-~~~~--~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~  158 (399)
T 3ke6_A           93 QISAGYT-----------VVEALEAVDR-FHKQ--VPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEP  158 (399)
T ss_dssp             HHHTTCC-----------HHHHHHHHHH-HGGG--STTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCC
T ss_pred             HHhcCCC-----------HHHHHHHHHH-HHHh--cCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeec
Confidence            5433221           3344556666 3222  233478999988886  678999999999999998 677777766


Q ss_pred             CCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCcccCCeeEEEeecCCCcEEEEEcCCCCCCCCH--
Q 016186          253 DQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCIIPVPEITFTTRTDEDECLILASDGLWDVMTN--  330 (394)
Q Consensus       253 DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~--  330 (394)
                      ++.+                                .+|-.       .......+ ..+.|+.|+|+||||++....  
T Consensus       159 ~~~~--------------------------------plG~~-------~~~~~~~~-~l~~Gd~l~l~TDGl~e~~~~~~  198 (399)
T 3ke6_A          159 TGAG--------------------------------PLGSG-------TGFPVRSE-VLNIGDAILFYTDGLIERPGRPL  198 (399)
T ss_dssp             CSCC--------------------------------CTTSS-------CCCCCEEE-ECCTTCEEEEECTTTTSCTTCCH
T ss_pred             CCCc--------------------------------ceECC-------CCceeEEE-EECCCCEEEEECCCcccCCCCCc
Confidence            5431                                12311       11112223 345799999999999998765  


Q ss_pred             ----HHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHh-CCCCCCeEEEEEEcCC
Q 016186          331 ----EEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYG-RNSSDNISIIVVDLKA  385 (394)
Q Consensus       331 ----~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~-~g~~DNiTvIVv~l~~  385 (394)
                          +.+.+++...................+.+++.+++.... .+..||+||+++++..
T Consensus       199 ~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~  258 (399)
T 3ke6_A          199 EASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRA  258 (399)
T ss_dssp             HHHHHHHHHHHHHHTC----------CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECC
T ss_pred             chhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeC
Confidence                344444433200000000000113344556665554443 5678999999999875


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.51  E-value=1.4e-06  Score=85.34  Aligned_cols=177  Identities=17%  Similarity=0.060  Sum_probs=94.7

Q ss_pred             CCeEEEEEEcCCC-CchHHHHHHHHHHHHHHHHHhhhccc-chHHHHHHHHHHHHHHHHhHHHHHhccCCCCCCceEEEE
Q 016186          145 SPIHFFGVYDGHG-GSQVAKFCAERMHEVIAEEWDRERVC-SDWQRRWEVAFSSGFERTDNEVLTEAAAPEMVGSTAVVV  222 (394)
Q Consensus       145 ~~~~lf~V~DG~G-G~~~~~~as~~~~~~l~~~~~~~~~~-~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~  222 (394)
                      .+..+++|+|+.| |..++-. +..+...+...+...... ...    .......+..+|+.+.+.   ...+..|++++
T Consensus       201 ~~~~~~~i~Dv~GhGv~aa~~-~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~l~~ln~~l~~~---~~~~~~t~~~~  272 (394)
T 3eq2_A          201 ERRVAFYLADVSGHGASSAFV-TVLLKFMTTRLLYESRRNGTLP----EFKPSEVLAHINRGLINT---KLGKHVTMLGG  272 (394)
T ss_dssp             TTEEEEEEEEESSCSTTTHHH-HHHHHHHHHHHHHHSCSSCSSS----SCCHHHHHHHHHHHHHHT---TCCCCEEEEEE
T ss_pred             CCcEEEEEEECCCCChHHHHH-HHHHHHHHHHHHHhhhccCCcc----cCCHHHHHHHHHHHHhcc---CcCcEEEEEEE
Confidence            3568899999988 6555543 333333443332221100 000    001345566788888653   23367888888


Q ss_pred             EEE--CCEEEEeecCCce-EEEEeCCeeeecCCCCCCCCHHHHHHHHHcCCeEeecCCccccCcccccccccccCCCCCc
Q 016186          223 VLS--GCQIITSNCGDSR-AVLCRGTETIPLTVDQKPDRQDELERIEGAGGRVINWNGARVFGVLAMSRAIGDRYLRPCI  299 (394)
Q Consensus       223 ~i~--~~~l~vanvGDSR-~yl~r~g~~~~LT~DH~~~~~~e~~ri~~~gg~v~~~~~~rv~g~l~ltRalGd~~~k~~v  299 (394)
                      +++  .+++.++|.|-.. .|+.++|.+..|.....+                                 +|-..     
T Consensus       273 ~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~p---------------------------------lG~~~-----  314 (394)
T 3eq2_A          273 VIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP---------------------------------VGLFD-----  314 (394)
T ss_dssp             EEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--C---------------------------------CSCCC-----
T ss_pred             EEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCce---------------------------------eEecC-----
Confidence            886  6789999999854 677788888777543221                                 22110     


Q ss_pred             ccCCeeEEEeecCCCcEEEEEcCCCCCCCCH-------HHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHh---
Q 016186          300 IPVPEITFTTRTDEDECLILASDGLWDVMTN-------EEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYG---  369 (394)
Q Consensus       300 ~~~P~i~~~~~~~~~d~llL~SDGlwd~l~~-------~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~---  369 (394)
                      ...... .....+.|+.|+|+||||++....       +.+.+++...            ...+    +.|.+....   
T Consensus       315 ~~~~~~-~~~~l~~gd~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~------------~~~~----~~l~~~~~~~~~  377 (394)
T 3eq2_A          315 DATYDD-RVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA------------GGTL----DGLRQVFGLANL  377 (394)
T ss_dssp             CC--CC-EEEECCSSCEEEECSSCCCC-----CCSTTTTTSHHHHHTT------------C--C----HHHHHHHSCCCS
T ss_pred             CCceEE-EEEEeCCCCEEEEECCCcccccCcccchhhHHHHHHHHHhc------------chhH----HHHHHHhcccCC
Confidence            011111 222345699999999999997443       2334443321            1222    333333322   


Q ss_pred             CCCCCCeEEEEEEcC
Q 016186          370 RNSSDNISIIVVDLK  384 (394)
Q Consensus       370 ~g~~DNiTvIVv~l~  384 (394)
                      ..-.||+|+++|+..
T Consensus       378 ~~~~DDit~l~i~~~  392 (394)
T 3eq2_A          378 AEMPDDIALLVLSRN  392 (394)
T ss_dssp             CC--CCCEEEEEC--
T ss_pred             CCCCCceEEEEEecc
Confidence            234799999999764


No 25 
>1b9l_A Protein (epimerase); isomerase; 2.90A {Escherichia coli} SCOP: d.96.1.3
Probab=27.65  E-value=1.7e+02  Score=22.57  Aligned_cols=55  Identities=11%  Similarity=0.123  Sum_probs=38.8

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEE
Q 016186          321 SDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVD  382 (394)
Q Consensus       321 SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~  382 (394)
                      ||-|-+.++..++.+.+.+.+...       ...-.+.+|+.|.+..+....-.-++|-|-+
T Consensus        48 sDdl~~tvdY~~v~~~i~~~v~~~-------~~~LiE~lA~~Ia~~~l~~~~v~~v~V~v~K  102 (120)
T 1b9l_A           48 SEDINDALNYRTVTKNIIQHVENN-------RFSLLEKLTQDVLDIAREHHWVTYAEVEIDK  102 (120)
T ss_dssp             GGTCSSCCCHHHHHHHHHHHHHTS-------EESCHHHHHHHHHHHHTCSTTCSEEEEEEEE
T ss_pred             cCCcccccCHHHHHHHHHHHHhcC-------CcchHHHHHHHHHHHHhccCCceEEEEEEEC
Confidence            788999999999999999875532       2256788999998887754333334444433


No 26 
>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}
Probab=25.61  E-value=1.8e+02  Score=23.32  Aligned_cols=53  Identities=9%  Similarity=0.226  Sum_probs=37.5

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEE
Q 016186          321 SDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIV  380 (394)
Q Consensus       321 SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIV  380 (394)
                      ||-|-+.++..++.+.+.+.+..       ....-.+.+|+.|.+..+..-.-..++|-|
T Consensus        66 sDdl~~tvdY~~v~~~I~~~v~~-------~~~~LlE~lAe~Ia~~il~~~~v~~v~V~V  118 (143)
T 3v9o_A           66 EDKLREVVDYDLMKQSVAQCVAR-------GHIHLQETLCDAIAASLLAHDAVRAVRVST  118 (143)
T ss_dssp             SCCGGGSCCTHHHHHHHHHHHHT-------CCCCSHHHHHHHHHHHHHSSTTCCEEEEEE
T ss_pred             CccchhccCHHHHHHHHHHHHhc-------CCcchHHHHHHHHHHHHHhcCCccEEEEEE
Confidence            56777889999999999987553       233667889999999888753333333333


No 27 
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=22.04  E-value=23  Score=32.16  Aligned_cols=21  Identities=33%  Similarity=0.544  Sum_probs=16.5

Q ss_pred             EEEEEc-CCCCchHHHHHHHHH
Q 016186          149 FFGVYD-GHGGSQVAKFCAERM  169 (394)
Q Consensus       149 lf~V~D-G~GG~~~~~~as~~~  169 (394)
                      -.|||| |+||....+...+.+
T Consensus         9 pIgvfDSGvGGLtv~~~i~~~l   30 (268)
T 3out_A            9 PIGVFDSGIGGLTIVKNLMSIL   30 (268)
T ss_dssp             CEEEEESSSTTHHHHHHHHHHC
T ss_pred             cEEEEECCCChHHHHHHHHHHC
Confidence            479999 999998877665544


No 28 
>4aey_A D-erythro-7,8-dihydroneopterin triphosphate epime; isomerase, pteridine biosynthesis; 3.00A {Pseudomonas aeruginosa}
Probab=21.25  E-value=2e+02  Score=23.62  Aligned_cols=57  Identities=4%  Similarity=0.099  Sum_probs=35.4

Q ss_pred             EEcCCCCCCCCHHHHHHHHHHHHHhhhhcccccCCCcHHHHHHHHHHHHHhCCCCCCeEEEEEE
Q 016186          319 LASDGLWDVMTNEEVGEVARRLLRRRRRSLLVDEVSPAQVVADNLTEIAYGRNSSDNISIIVVD  382 (394)
Q Consensus       319 L~SDGlwd~l~~~ei~~iv~~~l~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIVv~  382 (394)
                      -.||-|-+.++..++.+.+.+.+...       ...-.+.+|+.|.+..+....-..++|-|-+
T Consensus        82 ~~sDdL~dTvdY~~v~~~I~~~v~~~-------~f~LIEtLAe~Ia~~ll~~~~v~~V~V~V~K  138 (156)
T 4aey_A           82 VEVNDIEHALNYRTITKAIIRHVEEN-------RFALLERMTQEILDLVMENPAVRYAEVEVDK  138 (156)
T ss_dssp             -------CCCHHHHHHHHHHHHHHTS-------EESCHHHHHHHHHHHHHHSCCCSEEEEEEEE
T ss_pred             cccCcchhccCHHHHHHHHHHHHhcC-------CcccHHHHHHHHHHHHHhcCCccEEEEEEEC
Confidence            45788999999999999998875532       2256788999999987765544445544444


Done!