Query 016187
Match_columns 394
No_of_seqs 395 out of 2711
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 09:22:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016187.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016187hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 1.5E-55 5.3E-60 432.4 46.8 333 57-391 140-610 (611)
2 1nr0_A Actin interacting prote 100.0 7E-55 2.4E-59 427.7 49.1 337 55-392 50-567 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 4.4E-52 1.5E-56 405.2 51.1 325 55-389 253-577 (577)
4 1vyh_C Platelet-activating fac 100.0 7.4E-53 2.5E-57 393.7 42.2 289 100-391 101-410 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 6E-52 2.1E-56 378.0 45.1 288 98-389 46-340 (340)
6 1vyh_C Platelet-activating fac 100.0 2.9E-52 9.9E-57 389.7 42.8 290 56-349 100-410 (410)
7 3ow8_A WD repeat-containing pr 100.0 7.9E-52 2.7E-56 374.0 42.9 289 100-391 25-320 (321)
8 3ow8_A WD repeat-containing pr 100.0 3.2E-51 1.1E-55 370.1 42.4 290 56-348 24-319 (321)
9 2ymu_A WD-40 repeat protein; u 100.0 1.8E-50 6E-55 393.9 50.4 327 55-391 212-538 (577)
10 2pbi_B Guanine nucleotide-bind 100.0 8.4E-51 2.9E-55 372.4 44.6 289 98-389 55-354 (354)
11 3iz6_a 40S ribosomal protein R 100.0 1.3E-51 4.4E-56 381.6 34.7 304 90-393 49-376 (380)
12 1got_B GT-beta; complex (GTP-b 100.0 1.4E-49 4.8E-54 362.4 45.2 290 53-347 44-340 (340)
13 2ynn_A Coatomer subunit beta'; 100.0 8.6E-50 2.9E-54 358.1 42.8 291 55-349 4-301 (304)
14 2ynn_A Coatomer subunit beta'; 100.0 1.2E-49 4.1E-54 357.2 41.6 291 98-392 4-302 (304)
15 3frx_A Guanine nucleotide-bind 100.0 1.8E-49 6E-54 358.5 42.9 296 56-392 9-317 (319)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.1E-50 2.8E-54 364.7 40.2 296 98-393 6-336 (345)
17 1r5m_A SIR4-interacting protei 100.0 5.8E-50 2E-54 374.6 39.5 325 61-391 42-424 (425)
18 4ery_A WD repeat-containing pr 100.0 2.2E-48 7.5E-53 350.1 45.1 296 55-391 14-311 (312)
19 2pbi_B Guanine nucleotide-bind 100.0 2.5E-48 8.7E-53 355.9 45.3 291 53-347 53-354 (354)
20 2xzm_R RACK1; ribosome, transl 100.0 1.1E-48 3.8E-53 356.9 42.5 292 98-392 12-340 (343)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-48 3.6E-53 357.3 40.8 300 55-358 6-343 (345)
22 1erj_A Transcriptional repress 100.0 1.6E-48 5.6E-53 362.4 42.5 284 105-393 62-390 (393)
23 3sfz_A APAF-1, apoptotic pepti 100.0 2.3E-48 7.8E-53 410.8 47.5 337 55-392 606-1034(1249)
24 4g56_B MGC81050 protein; prote 100.0 4.2E-49 1.4E-53 361.5 36.3 305 79-392 18-343 (357)
25 1gxr_A ESG1, transducin-like e 100.0 2.3E-48 7.9E-53 352.6 40.3 322 63-391 8-336 (337)
26 4gqb_B Methylosome protein 50; 100.0 8E-49 2.7E-53 357.3 36.3 288 62-353 28-334 (344)
27 2oaj_A Protein SNI1; WD40 repe 100.0 4.5E-48 1.6E-52 393.2 45.7 329 58-392 11-605 (902)
28 2hes_X YDR267CP; beta-propelle 100.0 3.5E-48 1.2E-52 351.6 40.0 291 96-392 3-328 (330)
29 3iz6_a 40S ribosomal protein R 100.0 2.7E-49 9.2E-54 366.0 33.2 294 55-352 57-377 (380)
30 4g56_B MGC81050 protein; prote 100.0 6.9E-49 2.4E-53 360.0 34.4 291 60-353 38-346 (357)
31 4gqb_B Methylosome protein 50; 100.0 3.5E-48 1.2E-52 353.0 38.2 294 89-392 16-331 (344)
32 2xzm_R RACK1; ribosome, transl 100.0 1.4E-47 4.8E-52 349.6 41.6 291 55-351 12-341 (343)
33 2hes_X YDR267CP; beta-propelle 100.0 9.9E-48 3.4E-52 348.7 40.2 288 56-350 6-328 (330)
34 2pm9_A Protein WEB1, protein t 100.0 8.3E-50 2.9E-54 373.2 25.9 330 63-393 11-415 (416)
35 3vl1_A 26S proteasome regulato 100.0 8.5E-48 2.9E-52 360.3 39.0 324 66-392 58-419 (420)
36 4aow_A Guanine nucleotide-bind 100.0 1.4E-46 4.7E-51 341.7 45.0 295 95-392 26-337 (340)
37 1pgu_A Actin interacting prote 100.0 9.2E-47 3.1E-51 370.0 45.8 335 55-392 151-614 (615)
38 1pgu_A Actin interacting prote 100.0 3.9E-46 1.3E-50 365.5 47.7 335 55-393 54-573 (615)
39 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.4E-46 2.2E-50 350.6 46.9 319 56-392 110-442 (445)
40 3v7d_B Cell division control p 100.0 6.7E-46 2.3E-50 352.2 46.5 321 56-389 113-460 (464)
41 3dm0_A Maltose-binding peripla 100.0 4.7E-46 1.6E-50 370.6 44.6 294 99-393 374-694 (694)
42 2j04_B YDR362CP, TAU91; beta p 100.0 1.6E-48 5.5E-53 372.8 25.2 325 63-392 132-517 (524)
43 4aow_A Guanine nucleotide-bind 100.0 1.5E-45 5.1E-50 334.9 43.5 292 56-352 30-339 (340)
44 1erj_A Transcriptional repress 100.0 9.2E-46 3.2E-50 343.9 42.0 287 61-350 61-389 (393)
45 2oaj_A Protein SNI1; WD40 repe 100.0 2.4E-46 8.1E-51 380.6 39.3 325 61-390 55-659 (902)
46 3sfz_A APAF-1, apoptotic pepti 100.0 9.5E-46 3.2E-50 390.8 45.3 334 55-393 648-1117(1249)
47 3mkq_A Coatomer beta'-subunit; 100.0 2.4E-45 8.1E-50 371.8 45.2 335 55-393 4-387 (814)
48 3zwl_B Eukaryotic translation 100.0 8.3E-45 2.8E-49 333.2 44.4 291 100-392 25-346 (369)
49 3dm0_A Maltose-binding peripla 100.0 1.8E-44 6.3E-49 359.1 43.6 288 57-349 375-692 (694)
50 1sq9_A Antiviral protein SKI8; 100.0 3.9E-45 1.4E-49 339.5 36.0 293 56-352 8-397 (397)
51 1sq9_A Antiviral protein SKI8; 100.0 5.9E-45 2E-49 338.3 36.7 291 100-393 9-396 (397)
52 3gre_A Serine/threonine-protei 100.0 1.1E-45 3.8E-50 348.0 31.0 317 54-389 52-437 (437)
53 1gxr_A ESG1, transducin-like e 100.0 1E-43 3.6E-48 322.0 42.4 283 59-348 46-335 (337)
54 3ei3_B DNA damage-binding prot 100.0 2.6E-44 8.9E-49 332.8 37.8 293 91-392 57-382 (383)
55 3i2n_A WD repeat-containing pr 100.0 5E-45 1.7E-49 333.5 31.9 298 52-353 6-356 (357)
56 3zwl_B Eukaryotic translation 100.0 5.1E-43 1.7E-47 321.3 44.7 297 55-357 23-353 (369)
57 4e54_B DNA damage-binding prot 100.0 2.2E-45 7.5E-50 345.9 29.6 305 57-393 112-431 (435)
58 3i2n_A WD repeat-containing pr 100.0 2.7E-44 9.3E-49 328.7 35.0 292 101-393 12-354 (357)
59 1k8k_C P40, ARP2/3 complex 41 100.0 4.9E-44 1.7E-48 329.0 35.7 289 59-352 3-363 (372)
60 3ei3_B DNA damage-binding prot 100.0 1.7E-43 5.7E-48 327.3 36.3 287 55-350 64-382 (383)
61 1r5m_A SIR4-interacting protei 100.0 2E-43 6.7E-48 330.3 37.2 300 90-392 28-361 (425)
62 3dwl_C Actin-related protein 2 100.0 3.5E-45 1.2E-49 337.8 24.9 323 58-390 5-377 (377)
63 3k26_A Polycomb protein EED; W 100.0 4.8E-44 1.6E-48 328.0 32.0 291 58-350 12-366 (366)
64 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-42 5.2E-47 311.2 40.5 283 97-392 8-296 (313)
65 3k26_A Polycomb protein EED; W 100.0 2.8E-44 9.5E-49 329.5 29.7 288 102-391 13-365 (366)
66 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-43 5.6E-48 325.5 34.6 287 103-392 4-361 (372)
67 4a11_B DNA excision repair pro 100.0 1E-42 3.5E-47 323.8 38.6 336 55-394 34-407 (408)
68 2pm9_A Protein WEB1, protein t 100.0 5.3E-44 1.8E-48 333.8 29.6 286 107-393 12-338 (416)
69 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-42 9.8E-47 309.4 39.4 291 54-357 8-303 (313)
70 3mkq_A Coatomer beta'-subunit; 100.0 8.1E-42 2.8E-46 345.9 43.8 325 55-389 46-420 (814)
71 4a11_B DNA excision repair pro 100.0 8.8E-43 3E-47 324.3 33.7 305 85-393 21-366 (408)
72 4aez_A CDC20, WD repeat-contai 100.0 8.6E-42 2.9E-46 318.0 38.2 286 101-393 85-381 (401)
73 4h5i_A Guanine nucleotide-exch 100.0 7.3E-43 2.5E-47 320.9 30.2 278 107-391 14-342 (365)
74 4gga_A P55CDC, cell division c 100.0 3E-41 1E-45 316.3 39.4 277 109-392 107-395 (420)
75 4ggc_A P55CDC, cell division c 100.0 6.1E-41 2.1E-45 301.6 39.9 277 110-393 28-316 (318)
76 2pm7_B Protein transport prote 100.0 1.8E-41 6.1E-46 302.9 35.4 247 58-308 3-284 (297)
77 4aez_A CDC20, WD repeat-contai 100.0 1.6E-41 5.6E-46 316.1 36.6 298 52-358 77-388 (401)
78 2pm7_B Protein transport prote 100.0 1.5E-41 5.3E-46 303.3 34.5 247 100-349 2-284 (297)
79 3vl1_A 26S proteasome regulato 100.0 1.3E-41 4.4E-46 318.3 34.7 281 66-350 99-419 (420)
80 3frx_A Guanine nucleotide-bind 100.0 5.3E-41 1.8E-45 302.9 37.3 247 56-309 57-317 (319)
81 3bg1_A Protein SEC13 homolog; 100.0 2.9E-42 9.9E-47 310.8 28.3 248 102-349 8-292 (316)
82 3v7d_B Cell division control p 100.0 1.7E-40 5.7E-45 315.1 40.2 286 99-393 113-422 (464)
83 3bg1_A Protein SEC13 homolog; 100.0 1.1E-41 3.7E-46 307.1 29.4 272 57-338 6-313 (316)
84 4gga_A P55CDC, cell division c 100.0 5.2E-40 1.8E-44 307.9 41.3 309 52-369 89-414 (420)
85 1yfq_A Cell cycle arrest prote 100.0 8E-41 2.8E-45 304.1 34.5 275 100-384 4-315 (342)
86 3dw8_B Serine/threonine-protei 100.0 7.6E-41 2.6E-45 315.5 35.4 282 105-390 26-444 (447)
87 3dw8_B Serine/threonine-protei 100.0 4.8E-41 1.6E-45 316.9 32.7 283 62-348 26-444 (447)
88 4ery_A WD repeat-containing pr 100.0 1.1E-39 3.9E-44 293.2 39.5 253 55-308 56-311 (312)
89 4h5i_A Guanine nucleotide-exch 100.0 4.9E-41 1.7E-45 308.7 30.8 280 65-350 15-343 (365)
90 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-40 5.8E-45 301.6 33.7 298 57-393 4-338 (351)
91 3mmy_A MRNA export factor; mRN 100.0 2.2E-40 7.6E-45 303.6 34.7 293 92-391 24-345 (368)
92 1p22_A F-BOX/WD-repeat protein 100.0 4.2E-40 1.4E-44 309.9 36.8 291 60-369 129-432 (435)
93 1p22_A F-BOX/WD-repeat protein 100.0 2.8E-40 9.5E-45 311.1 35.6 276 103-392 129-414 (435)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-39 7.1E-44 306.0 40.1 282 96-393 107-392 (445)
95 2j04_B YDR362CP, TAU91; beta p 100.0 4.5E-41 1.5E-45 321.4 25.5 286 58-349 201-516 (524)
96 4ggc_A P55CDC, cell division c 100.0 1.4E-38 4.7E-43 286.2 39.6 295 51-351 8-316 (318)
97 3mmy_A MRNA export factor; mRN 100.0 2.9E-39 1E-43 296.1 35.0 294 51-349 26-345 (368)
98 1yfq_A Cell cycle arrest prote 100.0 2.1E-39 7.1E-44 294.7 33.1 280 58-347 5-321 (342)
99 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-40 5.4E-45 311.1 25.2 293 64-381 15-350 (588)
100 3jrp_A Fusion protein of prote 100.0 4.9E-39 1.7E-43 296.0 31.3 250 98-350 2-287 (379)
101 2aq5_A Coronin-1A; WD40 repeat 100.0 2.8E-39 9.5E-44 301.1 29.3 284 67-354 37-346 (402)
102 3bws_A Protein LP49; two-domai 100.0 2.2E-37 7.7E-42 290.8 40.4 324 63-393 59-433 (433)
103 3jrp_A Fusion protein of prote 100.0 3.5E-38 1.2E-42 290.3 33.3 253 56-309 3-287 (379)
104 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-38 3.8E-43 297.0 29.7 280 110-392 37-342 (402)
105 1l0q_A Surface layer protein; 100.0 1.7E-36 5.8E-41 280.9 44.0 308 77-392 2-342 (391)
106 3gre_A Serine/threonine-protei 100.0 3E-39 1E-43 304.1 25.5 279 72-393 35-360 (437)
107 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-37 4.6E-42 284.8 31.6 287 91-392 3-336 (355)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.5E-37 1.6E-41 290.5 35.0 282 107-391 4-390 (450)
109 2j04_A TAU60, YPL007P, hypothe 100.0 2.8E-38 9.7E-43 295.9 26.2 264 105-391 13-296 (588)
110 2xyi_A Probable histone-bindin 100.0 2.7E-37 9.1E-42 290.3 31.1 250 57-309 121-410 (430)
111 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-37 6.5E-42 282.6 29.1 269 76-389 47-330 (343)
112 3dwl_C Actin-related protein 2 100.0 1.5E-38 5E-43 293.4 20.0 242 146-391 8-280 (377)
113 3jro_A Fusion protein of prote 100.0 6E-38 2.1E-42 314.3 24.4 250 57-310 2-286 (753)
114 4gq1_A NUP37; propeller, trans 100.0 1.8E-37 6.3E-42 287.9 23.4 258 112-393 94-390 (393)
115 3vu4_A KMHSV2; beta-propeller 100.0 8.1E-36 2.8E-40 273.0 33.8 277 57-349 12-335 (355)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.3E-36 3.2E-40 281.5 34.9 280 65-349 5-390 (450)
117 2xyi_A Probable histone-bindin 100.0 4.1E-36 1.4E-40 282.2 32.3 246 143-391 122-409 (430)
118 3jro_A Fusion protein of prote 100.0 1.5E-36 5.2E-41 304.2 27.4 248 100-350 2-285 (753)
119 3bws_A Protein LP49; two-domai 100.0 8.8E-35 3E-39 273.1 37.6 278 65-349 123-431 (433)
120 4e54_B DNA damage-binding prot 100.0 3.6E-36 1.2E-40 283.1 26.8 254 57-312 157-433 (435)
121 2w18_A PALB2, fancn, partner a 100.0 6.7E-35 2.3E-39 257.2 31.1 290 66-391 41-356 (356)
122 1l0q_A Surface layer protein; 100.0 7E-34 2.4E-38 263.3 38.8 266 120-393 3-276 (391)
123 4gq1_A NUP37; propeller, trans 100.0 1.9E-34 6.5E-39 267.6 22.9 243 62-307 87-387 (393)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.9E-33 6.5E-38 262.5 28.8 302 64-374 62-410 (415)
125 1nir_A Nitrite reductase; hemo 100.0 2E-32 6.8E-37 263.5 36.2 315 72-394 145-516 (543)
126 3lrv_A PRE-mRNA-splicing facto 100.0 5.5E-34 1.9E-38 259.6 22.8 237 114-391 43-291 (343)
127 3f3f_A Nucleoporin SEH1; struc 100.0 3.5E-32 1.2E-36 246.7 25.8 253 55-310 48-338 (351)
128 2w18_A PALB2, fancn, partner a 100.0 8.6E-32 2.9E-36 237.5 25.2 248 55-307 77-355 (356)
129 2ecf_A Dipeptidyl peptidase IV 100.0 4.3E-31 1.5E-35 264.8 32.7 320 64-390 36-457 (741)
130 1k32_A Tricorn protease; prote 100.0 3.3E-30 1.1E-34 267.3 35.8 327 57-392 45-461 (1045)
131 1nir_A Nitrite reductase; hemo 100.0 7E-29 2.4E-33 238.8 40.8 299 57-361 172-525 (543)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-30 6E-35 242.5 27.7 277 107-391 62-386 (415)
133 1k32_A Tricorn protease; prote 100.0 1E-28 3.4E-33 256.2 33.5 322 57-391 92-501 (1045)
134 1xfd_A DIP, dipeptidyl aminope 100.0 1.4E-29 4.8E-34 253.1 25.9 311 66-380 18-428 (723)
135 3u4y_A Uncharacterized protein 100.0 4.5E-27 1.5E-31 212.5 35.1 275 113-392 3-304 (331)
136 3u4y_A Uncharacterized protein 100.0 3.3E-27 1.1E-31 213.4 34.2 279 71-352 4-306 (331)
137 2z3z_A Dipeptidyl aminopeptida 100.0 6.5E-28 2.2E-32 240.4 32.2 314 67-392 28-435 (706)
138 1ri6_A Putative isomerase YBHE 100.0 2.2E-27 7.5E-32 215.2 32.5 293 76-374 4-335 (343)
139 2z3z_A Dipeptidyl aminopeptida 100.0 1.8E-27 6E-32 237.3 33.6 282 65-352 82-437 (706)
140 1pby_B Quinohemoprotein amine 100.0 4.1E-27 1.4E-31 212.8 31.2 275 78-361 2-321 (337)
141 2ecf_A Dipeptidyl peptidase IV 100.0 4.8E-28 1.7E-32 242.6 27.3 281 107-391 36-412 (741)
142 3vgz_A Uncharacterized protein 100.0 3.7E-26 1.3E-30 208.1 35.4 276 63-341 39-335 (353)
143 3vgz_A Uncharacterized protein 100.0 9.5E-26 3.2E-30 205.4 36.6 271 106-382 39-334 (353)
144 2ojh_A Uncharacterized protein 100.0 5.6E-27 1.9E-31 207.6 24.1 253 81-341 16-293 (297)
145 1pby_B Quinohemoprotein amine 100.0 6.8E-26 2.3E-30 204.8 30.5 264 120-393 2-311 (337)
146 1ri6_A Putative isomerase YBHE 100.0 8.1E-26 2.8E-30 204.8 30.0 264 121-391 7-307 (343)
147 2ojh_A Uncharacterized protein 100.0 1.6E-26 5.4E-31 204.6 24.7 252 124-383 17-293 (297)
148 1xfd_A DIP, dipeptidyl aminope 100.0 2.6E-27 8.9E-32 236.6 21.7 281 109-391 18-392 (723)
149 1z68_A Fibroblast activation p 100.0 1.5E-26 5E-31 231.1 24.6 319 69-392 20-443 (719)
150 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-24 5.1E-29 197.0 31.5 284 70-360 5-335 (349)
151 3o4h_A Acylamino-acid-releasin 99.9 2E-25 6.7E-30 217.6 24.9 270 64-350 21-315 (582)
152 1jmx_B Amine dehydrogenase; ox 99.9 2.7E-24 9.2E-29 195.4 29.0 264 112-393 4-326 (349)
153 3o4h_A Acylamino-acid-releasin 99.9 2.2E-25 7.6E-30 217.2 22.4 266 106-390 20-313 (582)
154 3hfq_A Uncharacterized protein 99.9 1E-23 3.5E-28 191.9 31.2 263 128-391 15-316 (347)
155 3hfq_A Uncharacterized protein 99.9 3.2E-23 1.1E-27 188.6 32.5 271 84-355 13-324 (347)
156 3scy_A Hypothetical bacterial 99.9 9E-23 3.1E-27 186.7 33.8 283 84-370 24-360 (361)
157 3pe7_A Oligogalacturonate lyas 99.9 3E-23 1E-27 191.6 28.4 295 91-391 14-381 (388)
158 4a5s_A Dipeptidyl peptidase 4 99.9 1.2E-22 4E-27 203.4 31.5 320 66-391 18-448 (740)
159 1z68_A Fibroblast activation p 99.9 5.2E-24 1.8E-28 212.7 19.8 271 112-391 20-390 (719)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 2.6E-23 9E-28 194.7 20.3 201 65-268 37-279 (434)
161 3scy_A Hypothetical bacterial 99.9 2.8E-21 9.6E-26 176.8 32.5 270 119-391 13-336 (361)
162 3azo_A Aminopeptidase; POP fam 99.9 5.3E-22 1.8E-26 196.3 28.9 298 58-361 17-380 (662)
163 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-22 4.1E-27 190.2 22.7 215 129-351 23-279 (434)
164 3pe7_A Oligogalacturonate lyas 99.9 4.2E-22 1.4E-26 183.8 25.4 287 57-347 23-379 (388)
165 3c5m_A Oligogalacturonate lyas 99.9 2E-22 6.9E-27 186.3 22.1 293 91-391 14-381 (396)
166 2oiz_A Aromatic amine dehydrog 99.9 1.2E-20 4E-25 172.5 31.0 283 85-374 29-360 (361)
167 1jof_A Carboxy-CIS,CIS-muconat 99.9 7.8E-21 2.7E-25 174.2 28.8 269 121-391 4-340 (365)
168 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.2E-20 4E-25 173.0 29.1 263 87-351 14-342 (365)
169 3c5m_A Oligogalacturonate lyas 99.9 5E-21 1.7E-25 176.9 21.8 281 67-353 38-387 (396)
170 2oiz_A Aromatic amine dehydrog 99.9 3.9E-20 1.3E-24 169.1 26.7 265 118-393 14-335 (361)
171 4a5s_A Dipeptidyl peptidase 4 99.9 1.4E-20 4.9E-25 188.3 25.7 276 109-390 18-396 (740)
172 3azo_A Aminopeptidase; POP fam 99.9 1.6E-20 5.6E-25 185.6 25.7 282 102-390 18-365 (662)
173 3fvz_A Peptidyl-glycine alpha- 99.9 4.3E-19 1.5E-23 160.2 31.3 242 64-309 23-322 (329)
174 3fvz_A Peptidyl-glycine alpha- 99.9 9.3E-19 3.2E-23 158.0 33.3 249 107-391 23-321 (329)
175 1q7f_A NHL, brain tumor CG1071 99.9 2.6E-18 9E-23 151.7 33.1 237 149-392 29-280 (286)
176 2gop_A Trilobed protease; beta 99.9 4.4E-19 1.5E-23 161.1 28.0 253 86-364 42-343 (347)
177 2gop_A Trilobed protease; beta 99.9 6.4E-19 2.2E-23 160.0 28.2 256 108-390 15-329 (347)
178 1q7f_A NHL, brain tumor CG1071 99.9 6E-18 2.1E-22 149.3 33.7 242 104-351 26-281 (286)
179 2dg1_A DRP35, lactonase; beta 99.8 1.5E-18 5.1E-23 156.7 29.4 269 108-382 6-300 (333)
180 2dg1_A DRP35, lactonase; beta 99.8 2.2E-18 7.4E-23 155.7 29.7 267 66-341 7-301 (333)
181 1qks_A Cytochrome CD1 nitrite 99.8 3.2E-17 1.1E-21 157.4 37.0 313 77-394 167-540 (567)
182 3e5z_A Putative gluconolactona 99.8 2.3E-17 8E-22 146.4 31.9 244 56-311 19-288 (296)
183 2z2n_A Virginiamycin B lyase; 99.8 8E-16 2.7E-20 136.2 41.6 280 103-392 10-295 (299)
184 2z2n_A Virginiamycin B lyase; 99.8 2E-15 6.8E-20 133.6 41.7 281 61-351 11-296 (299)
185 3dsm_A Uncharacterized protein 99.8 6.6E-17 2.3E-21 145.7 32.5 274 85-370 15-320 (328)
186 3e5z_A Putative gluconolactona 99.8 5.1E-17 1.7E-21 144.2 29.3 236 142-385 20-280 (296)
187 2xdw_A Prolyl endopeptidase; a 99.8 5.7E-17 2E-21 161.5 30.1 239 151-392 126-414 (710)
188 2bkl_A Prolyl endopeptidase; m 99.8 7.1E-18 2.4E-22 167.6 21.1 247 105-359 118-405 (695)
189 1rwi_B Serine/threonine-protei 99.8 2.8E-16 9.7E-21 137.2 27.7 239 66-310 25-265 (270)
190 1qks_A Cytochrome CD1 nitrite 99.8 1.1E-14 3.7E-19 139.9 40.9 289 66-359 198-547 (567)
191 1rwi_B Serine/threonine-protei 99.8 3E-16 1E-20 137.1 26.8 240 109-352 25-266 (270)
192 3no2_A Uncharacterized protein 99.8 4.6E-16 1.6E-20 136.4 27.9 214 160-380 4-231 (276)
193 2qc5_A Streptogramin B lactona 99.8 3.9E-14 1.3E-18 125.3 40.2 279 104-391 16-299 (300)
194 3no2_A Uncharacterized protein 99.8 7.6E-16 2.6E-20 135.0 27.8 212 77-297 5-231 (276)
195 2xdw_A Prolyl endopeptidase; a 99.8 3.5E-16 1.2E-20 155.8 29.0 246 62-311 122-416 (710)
196 2mad_H Methylamine dehydrogena 99.8 2.7E-14 9.2E-19 130.6 38.3 262 88-357 48-357 (373)
197 2bkl_A Prolyl endopeptidase; m 99.8 1.9E-16 6.4E-21 157.4 25.5 272 116-392 76-397 (695)
198 3dsm_A Uncharacterized protein 99.8 7.6E-16 2.6E-20 138.7 26.9 259 127-391 15-301 (328)
199 2qc5_A Streptogramin B lactona 99.7 8.2E-14 2.8E-18 123.2 39.1 276 63-348 18-298 (300)
200 2mad_H Methylamine dehydrogena 99.7 4.1E-14 1.4E-18 129.3 37.2 269 114-394 27-352 (373)
201 3sjl_D Methylamine dehydrogena 99.7 2.8E-15 9.5E-20 135.7 28.8 293 72-372 40-384 (386)
202 3sjl_D Methylamine dehydrogena 99.7 1.6E-14 5.6E-19 130.6 29.5 273 112-394 37-365 (386)
203 1yr2_A Prolyl oligopeptidase; 99.7 1.7E-15 5.7E-20 151.6 23.7 241 105-352 160-443 (741)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.6E-13 5.5E-18 122.3 31.3 237 107-350 17-299 (314)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 8.2E-14 2.8E-18 124.2 29.1 244 61-309 14-299 (314)
206 3c75_H MADH, methylamine dehyd 99.7 4.3E-14 1.5E-18 130.1 27.2 275 77-357 85-409 (426)
207 1yr2_A Prolyl oligopeptidase; 99.7 8.7E-15 3E-19 146.4 24.2 272 116-392 115-441 (741)
208 3g4e_A Regucalcin; six bladed 99.7 3.5E-13 1.2E-17 119.5 31.1 232 60-297 8-260 (297)
209 3hrp_A Uncharacterized protein 99.7 3E-13 1E-17 125.4 31.7 236 108-348 131-408 (409)
210 3c75_H MADH, methylamine dehyd 99.7 6.4E-14 2.2E-18 129.0 26.8 268 117-394 82-404 (426)
211 3hrp_A Uncharacterized protein 99.6 3.7E-13 1.3E-17 124.7 30.0 238 150-391 131-409 (409)
212 1kb0_A Quinohemoprotein alcoho 99.6 2.9E-13 9.9E-18 133.3 29.2 296 80-378 80-536 (677)
213 1yiq_A Quinohemoprotein alcoho 99.6 1.5E-13 5.3E-18 135.5 26.9 298 79-379 72-536 (689)
214 3dr2_A Exported gluconolactona 99.6 1E-12 3.4E-17 117.0 28.0 235 57-303 37-301 (305)
215 2qe8_A Uncharacterized protein 99.6 1.3E-13 4.4E-18 124.9 21.3 260 108-385 17-314 (343)
216 3g4e_A Regucalcin; six bladed 99.6 3.8E-12 1.3E-16 112.8 30.1 224 150-379 13-259 (297)
217 2ghs_A AGR_C_1268P; regucalcin 99.6 7.8E-12 2.7E-16 112.3 32.2 225 65-297 49-290 (326)
218 1xip_A Nucleoporin NUP159; bet 99.6 6.5E-14 2.2E-18 127.2 17.8 174 66-253 39-230 (388)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.6 2.3E-11 7.9E-16 111.4 35.2 298 79-389 55-375 (376)
220 3dr2_A Exported gluconolactona 99.6 2.6E-12 9E-17 114.2 25.6 234 144-386 39-301 (305)
221 3hxj_A Pyrrolo-quinoline quino 99.6 4.4E-13 1.5E-17 120.4 20.7 291 80-391 33-323 (330)
222 1xip_A Nucleoporin NUP159; bet 99.5 2.1E-13 7.3E-18 123.8 17.8 170 109-295 39-230 (388)
223 1mda_H Methylamine dehydrogena 99.5 1.1E-12 3.6E-17 118.9 21.0 269 88-371 47-366 (368)
224 2qe8_A Uncharacterized protein 99.5 7.1E-13 2.4E-17 120.0 19.6 264 65-346 17-317 (343)
225 3iuj_A Prolyl endopeptidase; h 99.5 1.1E-12 3.7E-17 130.2 21.3 241 104-353 125-408 (693)
226 1mda_H Methylamine dehydrogena 99.5 1.3E-12 4.6E-17 118.3 19.9 247 130-394 47-348 (368)
227 2ghs_A AGR_C_1268P; regucalcin 99.5 1.3E-10 4.6E-15 104.2 32.5 220 110-339 51-291 (326)
228 3iuj_A Prolyl endopeptidase; h 99.5 1.1E-11 3.7E-16 123.0 24.9 238 62-311 126-407 (693)
229 1kv9_A Type II quinohemoprotei 99.4 1.3E-10 4.5E-15 114.3 28.0 299 80-380 69-520 (668)
230 1yiq_A Quinohemoprotein alcoho 99.4 1E-10 3.5E-15 115.4 26.3 271 119-393 70-506 (689)
231 2hz6_A Endoplasmic reticulum t 99.4 1.8E-13 6.1E-18 125.2 3.9 256 77-349 9-278 (369)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.8E-09 1.3E-13 96.5 32.7 265 119-393 53-338 (376)
233 1kb0_A Quinohemoprotein alcoho 99.4 8.8E-11 3E-15 115.7 22.7 271 119-393 77-508 (677)
234 2hz6_A Endoplasmic reticulum t 99.4 3.8E-13 1.3E-17 123.0 4.9 257 118-390 8-277 (369)
235 4a2l_A BT_4663, two-component 99.3 2E-07 7E-12 93.8 45.8 314 64-391 214-570 (795)
236 4a2l_A BT_4663, two-component 99.3 1.4E-07 4.9E-12 94.9 42.9 313 67-391 175-525 (795)
237 2ece_A 462AA long hypothetical 99.3 1.5E-09 5.1E-14 99.0 24.7 223 74-297 93-399 (462)
238 2ece_A 462AA long hypothetical 99.3 9.3E-09 3.2E-13 93.8 29.1 221 159-380 93-399 (462)
239 2ad6_A Methanol dehydrogenase 99.3 3.3E-09 1.1E-13 102.3 27.9 296 76-377 62-522 (571)
240 1flg_A Protein (quinoprotein e 99.3 1.7E-08 5.7E-13 97.5 32.4 300 76-379 68-547 (582)
241 1w6s_A Methanol dehydrogenase 99.3 6.7E-09 2.3E-13 100.2 29.3 294 83-379 68-534 (599)
242 3hxj_A Pyrrolo-quinoline quino 99.3 1E-10 3.4E-15 104.9 15.6 258 112-390 24-282 (330)
243 1fwx_A Nitrous oxide reductase 99.3 2E-10 6.8E-15 108.3 17.7 280 78-381 16-407 (595)
244 1npe_A Nidogen, entactin; glyc 99.3 3.9E-08 1.3E-12 85.3 31.0 249 120-374 2-263 (267)
245 1npe_A Nidogen, entactin; glyc 99.2 6E-08 2.1E-12 84.1 30.4 221 65-290 36-262 (267)
246 3v9f_A Two-component system se 99.2 8.8E-07 3E-11 89.0 40.5 315 65-391 211-567 (781)
247 2iwa_A Glutamine cyclotransfer 99.2 3.6E-08 1.2E-12 84.5 25.4 206 99-309 11-237 (266)
248 2iwa_A Glutamine cyclotransfer 99.1 7.4E-08 2.5E-12 82.6 24.5 194 193-392 22-237 (266)
249 1fwx_A Nitrous oxide reductase 99.1 4.3E-09 1.5E-13 99.3 18.1 221 75-298 100-407 (595)
250 3nol_A Glutamine cyclotransfer 99.1 6.1E-08 2.1E-12 82.2 23.1 192 99-297 33-243 (262)
251 3v9f_A Two-component system se 99.1 4.3E-06 1.5E-10 84.0 40.2 313 65-390 258-609 (781)
252 1kv9_A Type II quinohemoprotei 99.1 5.6E-08 1.9E-12 95.6 25.2 272 119-393 66-489 (668)
253 2fp8_A Strictosidine synthase; 99.0 3E-07 1E-11 82.0 26.8 236 66-310 20-314 (322)
254 2fp8_A Strictosidine synthase; 99.0 4.4E-07 1.5E-11 81.0 27.7 236 151-392 20-313 (322)
255 2ad6_A Methanol dehydrogenase 99.0 2.1E-07 7.2E-12 89.7 25.3 268 119-393 62-495 (571)
256 1k3i_A Galactose oxidase precu 99.0 5.6E-08 1.9E-12 95.6 20.8 271 69-339 190-530 (656)
257 3nok_A Glutaminyl cyclase; bet 99.0 6.7E-07 2.3E-11 75.8 24.2 192 98-296 44-253 (268)
258 3mbr_X Glutamine cyclotransfer 98.9 8E-07 2.7E-11 74.7 24.4 192 99-297 11-222 (243)
259 3nol_A Glutamine cyclotransfer 98.9 3.1E-07 1E-11 77.9 21.6 188 62-256 38-244 (262)
260 1k3i_A Galactose oxidase precu 98.9 9.4E-08 3.2E-12 94.0 20.7 268 112-381 190-530 (656)
261 1w6s_A Methanol dehydrogenase 98.9 7.8E-07 2.7E-11 85.8 26.1 271 119-393 62-504 (599)
262 2p4o_A Hypothetical protein; p 98.9 5.5E-06 1.9E-10 73.2 29.6 225 150-381 32-277 (306)
263 3nok_A Glutaminyl cyclase; bet 98.9 6.2E-07 2.1E-11 76.0 21.6 184 62-254 50-253 (268)
264 2p4o_A Hypothetical protein; p 98.9 1.2E-05 4E-10 71.0 31.0 229 108-341 32-279 (306)
265 3mbr_X Glutamine cyclotransfer 98.8 2.6E-06 9E-11 71.5 24.1 187 62-255 16-222 (243)
266 1flg_A Protein (quinoprotein e 98.8 6E-06 2.1E-10 79.6 28.4 269 119-393 68-517 (582)
267 3v64_C Agrin; beta propeller, 98.8 2.5E-05 8.4E-10 70.4 29.2 207 65-275 73-283 (349)
268 3p5b_L Low density lipoprotein 98.8 6.2E-05 2.1E-09 69.1 32.3 220 63-284 110-337 (400)
269 3v64_C Agrin; beta propeller, 98.7 5E-05 1.7E-09 68.4 31.1 242 110-358 36-283 (349)
270 3s94_A LRP-6, low-density lipo 98.7 0.00023 8E-09 69.0 38.4 323 64-391 39-422 (619)
271 3qqz_A Putative uncharacterize 98.7 2.2E-05 7.4E-10 66.8 26.4 202 102-306 21-250 (255)
272 1ijq_A LDL receptor, low-densi 98.7 3.5E-05 1.2E-09 68.4 28.9 209 64-274 29-245 (316)
273 3v65_B Low-density lipoprotein 98.7 2.8E-05 9.5E-10 71.1 27.9 207 65-275 116-326 (386)
274 3tc9_A Hypothetical hydrolase; 98.7 1.7E-05 6E-10 73.5 26.2 236 67-307 139-428 (430)
275 3v65_B Low-density lipoprotein 98.7 9.1E-05 3.1E-09 67.6 30.5 252 111-369 80-337 (386)
276 3qqz_A Putative uncharacterize 98.7 3.7E-05 1.3E-09 65.4 25.5 202 60-265 22-251 (255)
277 2xe4_A Oligopeptidase B; hydro 98.6 2.7E-06 9.1E-11 84.9 20.8 197 105-307 170-398 (751)
278 4hw6_A Hypothetical protein, I 98.6 5.6E-05 1.9E-09 70.1 27.6 236 67-307 141-431 (433)
279 1ijq_A LDL receptor, low-densi 98.6 0.00028 9.5E-09 62.5 34.3 225 128-358 9-246 (316)
280 2xbg_A YCF48-like protein; pho 98.6 0.00037 1.3E-08 62.0 34.6 267 107-389 35-319 (327)
281 3tc9_A Hypothetical hydrolase; 98.5 7.3E-05 2.5E-09 69.3 26.6 153 109-266 138-300 (430)
282 3p5b_L Low density lipoprotein 98.5 0.00062 2.1E-08 62.4 34.8 233 121-359 85-329 (400)
283 4hw6_A Hypothetical protein, I 98.5 0.00015 5.1E-09 67.2 27.4 236 109-348 140-431 (433)
284 3kya_A Putative phosphatase; s 98.5 0.00018 6E-09 67.2 27.5 242 66-310 140-476 (496)
285 2xe4_A Oligopeptidase B; hydro 98.5 3.6E-05 1.2E-09 76.8 24.3 194 66-265 175-398 (751)
286 3sov_A LRP-6, low-density lipo 98.5 0.0002 7E-09 63.4 26.1 207 65-275 35-246 (318)
287 3sov_A LRP-6, low-density lipo 98.5 0.00046 1.6E-08 61.1 28.3 226 128-358 12-246 (318)
288 2xbg_A YCF48-like protein; pho 98.4 0.0008 2.7E-08 59.8 35.9 270 64-348 35-320 (327)
289 3m0c_C LDL receptor, low-densi 98.4 0.00036 1.2E-08 69.4 29.4 209 64-274 423-639 (791)
290 3s94_A LRP-6, low-density lipo 98.3 0.0028 9.6E-08 61.5 42.0 325 65-391 84-509 (619)
291 3m0c_C LDL receptor, low-densi 98.3 0.003 1E-07 62.8 32.8 227 127-358 402-640 (791)
292 3kya_A Putative phosphatase; s 98.3 0.00083 2.8E-08 62.7 26.7 236 151-392 140-475 (496)
293 2p9w_A MAL S 1 allergenic prot 98.3 0.00086 2.9E-08 58.8 24.8 155 69-223 17-216 (334)
294 1n7d_A LDL receptor, low-densi 98.3 8.2E-06 2.8E-10 80.5 13.4 218 66-285 407-632 (699)
295 2p9w_A MAL S 1 allergenic prot 98.2 0.00029 9.8E-09 61.8 19.8 200 193-393 14-266 (334)
296 3amr_A 3-phytase; beta-propell 98.2 0.00094 3.2E-08 59.0 23.0 193 161-358 40-272 (355)
297 3amr_A 3-phytase; beta-propell 98.2 0.0019 6.7E-08 57.0 24.8 191 77-274 41-271 (355)
298 3ei3_A DNA damage-binding prot 98.1 0.017 5.8E-07 60.1 37.9 315 64-390 553-953 (1158)
299 1n7d_A LDL receptor, low-densi 98.0 3.9E-05 1.3E-09 75.7 12.9 237 127-369 384-633 (699)
300 2ism_A Putative oxidoreductase 98.0 0.0048 1.6E-07 55.4 25.7 226 150-380 31-333 (352)
301 2vpj_A Kelch-like protein 12; 98.0 0.0012 4.1E-08 57.7 20.8 185 77-270 15-234 (301)
302 4a0p_A LRP6, LRP-6, low-densit 98.0 0.014 4.6E-07 56.7 42.6 320 65-391 37-419 (628)
303 2ism_A Putative oxidoreductase 98.0 0.0082 2.8E-07 53.8 26.5 220 108-337 31-332 (352)
304 3ii7_A Kelch-like protein 7; p 97.9 0.0026 8.9E-08 55.7 21.6 224 77-309 12-272 (306)
305 2xn4_A Kelch-like protein 2; s 97.9 0.0021 7.2E-08 56.2 19.7 221 78-309 17-276 (302)
306 4asc_A Kelch repeat and BTB do 97.7 0.016 5.4E-07 50.9 22.4 182 79-269 7-223 (315)
307 4a0p_A LRP6, LRP-6, low-densit 97.6 0.052 1.8E-06 52.6 45.2 157 65-224 80-239 (628)
308 1zgk_A Kelch-like ECH-associat 97.6 0.0077 2.6E-07 52.8 18.6 186 76-270 24-243 (308)
309 3ii7_A Kelch-like protein 7; p 97.5 0.0067 2.3E-07 53.1 17.7 187 76-269 55-274 (306)
310 2vpj_A Kelch-like protein 12; 97.5 0.008 2.7E-07 52.4 18.0 187 76-269 62-280 (301)
311 2g8s_A Glucose/sorbosone dehyd 97.5 0.052 1.8E-06 48.6 26.5 237 151-391 19-351 (353)
312 2xzh_A Clathrin heavy chain 1; 97.4 0.052 1.8E-06 47.3 30.7 255 129-391 49-331 (365)
313 2xn4_A Kelch-like protein 2; s 97.4 0.015 5.1E-07 50.7 18.5 185 76-269 61-278 (302)
314 2woz_A Kelch repeat and BTB do 97.3 0.043 1.5E-06 48.1 20.1 182 79-269 18-233 (318)
315 3a9g_A Putative uncharacterize 97.2 0.12 4E-06 46.3 29.2 226 150-380 29-330 (354)
316 3sre_A PON1, serum paraoxonase 97.1 0.12 4E-06 46.1 20.8 185 195-382 53-287 (355)
317 3sre_A PON1, serum paraoxonase 97.1 0.15 5.1E-06 45.4 21.4 177 85-265 81-296 (355)
318 1bpo_A Protein (clathrin); cla 97.1 0.17 5.8E-06 46.0 32.8 255 129-391 48-330 (494)
319 4asc_A Kelch repeat and BTB do 97.1 0.023 8E-07 49.8 15.8 174 89-269 69-279 (315)
320 3pbp_A Nucleoporin NUP82; beta 97.0 0.052 1.8E-06 49.1 17.5 146 116-263 29-208 (452)
321 1zgk_A Kelch-like ECH-associat 97.0 0.027 9.4E-07 49.2 15.4 185 76-269 70-289 (308)
322 1tl2_A L10, protein (tachylect 96.9 0.034 1.2E-06 45.6 13.9 172 119-302 4-203 (236)
323 1tl2_A L10, protein (tachylect 96.9 0.077 2.6E-06 43.5 15.6 142 108-260 41-203 (236)
324 3pbp_A Nucleoporin NUP82; beta 96.8 0.24 8.2E-06 44.9 20.1 143 202-346 31-208 (452)
325 2uvk_A YJHT; unknown function, 96.8 0.052 1.8E-06 48.5 16.1 93 76-170 19-128 (357)
326 2be1_A Serine/threonine-protei 96.8 0.051 1.7E-06 48.0 15.1 193 120-314 11-236 (339)
327 2be1_A Serine/threonine-protei 96.7 0.25 8.7E-06 43.6 19.2 222 162-393 11-298 (339)
328 2woz_A Kelch repeat and BTB do 96.7 0.087 3E-06 46.1 16.5 174 89-269 80-289 (318)
329 2zwa_A Leucine carboxyl methyl 96.7 0.13 4.6E-06 50.5 19.2 195 76-271 397-639 (695)
330 3a9g_A Putative uncharacterize 96.7 0.32 1.1E-05 43.3 30.7 225 64-297 28-330 (354)
331 3ei3_A DNA damage-binding prot 96.6 0.86 2.9E-05 47.5 34.7 244 130-380 493-755 (1158)
332 2uvk_A YJHT; unknown function, 96.3 0.17 5.8E-06 45.0 16.1 191 77-273 66-348 (357)
333 1xi4_A Clathrin heavy chain; a 96.2 0.61 2.1E-05 48.9 20.5 220 129-356 48-295 (1630)
334 2xzh_A Clathrin heavy chain 1; 95.9 0.8 2.7E-05 40.0 29.3 231 72-308 74-331 (365)
335 1xi4_A Clathrin heavy chain; a 95.8 1.2 4.2E-05 46.7 20.8 216 85-313 46-293 (1630)
336 2zwa_A Leucine carboxyl methyl 95.6 0.55 1.9E-05 46.1 17.1 191 117-310 396-636 (695)
337 2g8s_A Glucose/sorbosone dehyd 95.5 1.2 4.2E-05 39.5 28.9 230 64-296 17-340 (353)
338 3ott_A Two-component system se 95.5 2.2 7.7E-05 42.2 42.1 309 66-390 192-543 (758)
339 1cru_A Protein (soluble quinop 95.3 1.7 6E-05 40.1 20.6 106 192-297 27-162 (454)
340 3qhy_B Beta-lactamase inhibito 95.3 1.2 4.3E-05 38.1 17.4 242 109-375 25-267 (282)
341 3sbq_A Nitrous-oxide reductase 95.1 2.2 7.7E-05 40.1 23.0 293 78-380 71-453 (638)
342 3das_A Putative oxidoreductase 95.0 1.8 6E-05 38.4 30.8 231 145-380 27-326 (347)
343 1cru_A Protein (soluble quinop 94.8 2.4 8.2E-05 39.1 21.0 110 58-168 20-162 (454)
344 1bpo_A Protein (clathrin); cla 94.4 2.9 0.0001 38.1 33.4 247 85-346 46-327 (494)
345 3ott_A Two-component system se 93.9 5.4 0.00018 39.4 43.9 306 66-389 104-445 (758)
346 3qhy_B Beta-lactamase inhibito 93.9 2.7 9.4E-05 35.9 19.9 240 66-330 25-264 (282)
347 3das_A Putative oxidoreductase 93.2 4.2 0.00014 35.9 30.1 234 57-296 24-325 (347)
348 3b7f_A Glycosyl hydrolase, BNR 90.8 8.7 0.0003 34.3 25.9 141 109-254 116-296 (394)
349 3s25_A Hypothetical 7-bladed b 89.3 9.8 0.00034 32.8 25.8 204 156-385 59-286 (302)
350 3no0_A DNA gyrase subunit A; D 88.9 9.9 0.00034 32.3 16.6 155 237-394 24-198 (276)
351 1wp5_A Topoisomerase IV; broke 88.3 12 0.00042 32.5 16.9 188 201-393 3-226 (323)
352 3sbq_A Nitrous-oxide reductase 87.8 1.9 6.7E-05 40.5 8.4 104 194-297 325-453 (638)
353 1suu_A DNA gyrase subunit A; t 86.7 15 0.00051 31.8 20.8 191 200-394 5-233 (312)
354 3uc1_A DNA gyrase subunit A; D 85.4 18 0.00062 31.5 17.6 188 204-394 4-230 (327)
355 3s25_A Hypothetical 7-bladed b 82.9 22 0.00075 30.5 22.6 175 113-309 58-255 (302)
356 2wg3_C Hedgehog-interacting pr 81.6 32 0.0011 31.6 28.1 105 151-257 15-159 (463)
357 4gq2_M Nucleoporin NUP120; bet 80.6 10 0.00034 38.7 10.8 39 320-358 236-274 (950)
358 1suu_A DNA gyrase subunit A; t 78.4 32 0.0011 29.6 24.7 231 159-391 6-282 (312)
359 4gq2_M Nucleoporin NUP120; bet 77.4 28 0.00095 35.5 12.9 38 109-146 237-274 (950)
360 3b7f_A Glycosyl hydrolase, BNR 76.2 41 0.0014 29.8 31.1 258 107-370 54-391 (394)
361 3l6v_A GYRA, DNA gyrase subuni 75.5 44 0.0015 29.7 21.8 192 199-394 3-267 (370)
362 3no0_A DNA gyrase subunit A; D 73.5 40 0.0014 28.4 23.4 196 192-393 24-247 (276)
363 3uc1_A DNA gyrase subunit A; D 70.0 55 0.0019 28.4 23.4 229 162-392 4-279 (327)
364 1zi0_A DNA gyrase subunit A; b 68.0 58 0.002 27.9 23.7 231 160-392 2-277 (307)
365 4fhn_B Nucleoporin NUP120; pro 63.9 6.8 0.00023 40.8 5.1 37 322-358 240-276 (1139)
366 1zi0_A DNA gyrase subunit A; b 63.8 70 0.0024 27.4 21.6 193 201-394 1-228 (307)
367 3f7f_A Nucleoporin NUP120; nuc 61.7 15 0.00051 35.8 6.5 38 320-359 222-259 (729)
368 4fhn_B Nucleoporin NUP120; pro 61.3 34 0.0012 35.6 9.7 38 109-146 239-276 (1139)
369 2wg3_C Hedgehog-interacting pr 59.7 1.1E+02 0.0036 28.1 29.3 105 108-212 14-159 (463)
370 3zwu_A Alkaline phosphatase PH 57.5 45 0.0015 31.7 9.0 59 109-167 477-548 (592)
371 3zwu_A Alkaline phosphatase PH 57.0 39 0.0013 32.2 8.5 58 152-209 478-548 (592)
372 1wp5_A Topoisomerase IV; broke 56.3 99 0.0034 26.7 25.1 233 159-393 3-278 (323)
373 4a9v_A PHOX; hydrolase, beta-p 55.6 54 0.0018 31.0 8.9 61 66-126 477-549 (592)
374 3f7f_A Nucleoporin NUP120; nuc 55.4 21 0.00071 34.8 6.3 37 109-147 223-259 (729)
375 4hvt_A Ritya.17583.B, post-pro 54.3 1.6E+02 0.0056 28.7 17.0 228 157-390 137-428 (711)
376 1sqj_A OXG-RCBH, oligoxylogluc 54.2 1.7E+02 0.0059 28.9 25.5 148 64-212 14-190 (789)
377 3l6v_A GYRA, DNA gyrase subuni 54.0 1.2E+02 0.004 26.9 25.5 234 158-392 4-316 (370)
378 4a9v_A PHOX; hydrolase, beta-p 52.4 75 0.0026 30.1 9.3 60 108-167 476-548 (592)
379 1zvt_A Topoisomerase IV subuni 52.0 1E+02 0.0035 25.6 13.6 141 251-393 5-164 (256)
380 4hvt_A Ritya.17583.B, post-pro 34.5 3.3E+02 0.011 26.5 23.2 234 110-349 131-429 (711)
381 2cn3_A Xyloglucanase, beta-1,4 26.4 4.6E+02 0.016 25.5 24.4 53 66-118 24-82 (737)
382 1zvt_A Topoisomerase IV subuni 25.9 2.8E+02 0.0095 22.8 12.8 144 163-308 4-162 (256)
383 1q47_A Semaphorin 3A; beta pro 25.9 1.6E+02 0.0054 27.3 7.0 66 239-304 406-487 (495)
384 1ukf_A Avirulence protein AVRP 24.0 67 0.0023 25.1 3.4 41 62-102 116-156 (188)
385 1q47_A Semaphorin 3A; beta pro 23.7 2.4E+02 0.0082 26.0 7.8 56 332-387 422-487 (495)
386 4gz8_A Semaphorin-3A; multi-do 23.3 2.7E+02 0.0094 26.8 8.3 56 332-387 430-495 (667)
387 3nvq_A Semaphorin-7A; beta-pro 22.3 2.7E+02 0.0093 26.4 7.9 56 249-304 381-444 (590)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.5e-55 Score=432.40 Aligned_cols=333 Identities=21% Similarity=0.385 Sum_probs=289.6
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~ 136 (394)
...+.+|.+.|++++|+|++..+|+||+.|+++++|+..++++...+.+|.+.|++++|+|+|++|++|+.|++|++||+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 45678999999999999977678999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEe-------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcccee-------------------------
Q 016187 137 SSGNLKCTLE-------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL------------------------- 184 (394)
Q Consensus 137 ~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~------------------------- 184 (394)
.+++....+. +|.+.|.+++|+|++++|++++.|++|++||+.+++.+
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 9998888774 68999999999999999999999999999998865433
Q ss_pred ------------------eeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEc-CCC------------
Q 016187 185 ------------------NMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIR-GHP------------ 233 (394)
Q Consensus 185 ------------------~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~------------ 233 (394)
..+.+|...|++++|+|+|++|++++.|++|++||+.+++....+. .|.
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 2345799999999999999999999999999999998765432210 000
Q ss_pred ------------------------------------------------------------------CcccCeEEEEEcCC
Q 016187 234 ------------------------------------------------------------------YHTEGLTCLTISAD 247 (394)
Q Consensus 234 ------------------------------------------------------------------~~~~~i~~~~~~~~ 247 (394)
.+...+.+++++|+
T Consensus 380 ~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 380 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND 459 (611)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT
T ss_pred cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC
Confidence 01234678999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCcE--EEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCC-CCcce--ec-cCCCC
Q 016187 248 STLALSGSKDGSVHMVNITTGKV--VSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQH-SLPRS--TC-DHEDG 321 (394)
Q Consensus 248 ~~~l~~g~~dg~i~i~d~~~~~~--~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~--~~-~~~~~ 321 (394)
++++++|+.|++|++||+.+++. +.. ..|...|.+++|+|++++|++++.|++|++|++.. ..... .. .|...
T Consensus 460 g~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~ 538 (611)
T 1nr0_A 460 KQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAK 538 (611)
T ss_dssp SCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSC
T ss_pred CCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccc
Confidence 99999999999999999987653 233 67999999999999999999999999999999875 32221 22 38899
Q ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCe-EE-EEeecc-cCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 322 VTCLMWLGTSKYVVTGCVDGKVRVWDSLSGD-CV-RTFSGH-RDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 322 v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~-~~-~~~~~h-~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
|.+++|+|++++|++|+.|++|++|++.++. ++ ..+.+| ...|++++|+|+++ |+|++.|++|++|++.
T Consensus 539 V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 539 VACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred eeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 9999999999999999999999999998865 33 677899 89999999999998 9999999999999984
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7e-55 Score=427.73 Aligned_cols=337 Identities=22% Similarity=0.330 Sum_probs=287.7
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe--eeE-------------------------------
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WAS------------------------------- 101 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~--~~~------------------------------- 101 (394)
.....|.+|.+.|++++|+|+ +.+||||+.|++|+|||+.+++ ...
T Consensus 50 ~~~~~~~~h~~~v~~~~~spd-g~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPS-GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred ccCeEecCCCCceEEEEECCC-CcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 456778999999999999995 6799999999999999985322 111
Q ss_pred -------------eecCcccCEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEe
Q 016187 102 -------------EIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG 167 (394)
Q Consensus 102 -------------~~~~h~~~V~~v~~s~~g~-~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 167 (394)
.+.+|.+.|++++|+|++. +|++|+.|++|++||..+++...++.+|...|.+++|+|++++|++|
T Consensus 129 ~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 129 GHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 208 (611)
T ss_dssp EEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred eEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEE
Confidence 2356777788888888876 59999999999999999998889999999999999999999999999
Q ss_pred cCCCeEEEEeCCccceeeeec-------ccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCC--------
Q 016187 168 SEDSTVWMWNADRAAYLNMFS-------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGH-------- 232 (394)
Q Consensus 168 s~d~~i~iw~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-------- 232 (394)
+.|++|++|+..+++.+..+. +|...|.+++|+|++++|++++.|++|++||+.+++.+..+...
T Consensus 209 s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~ 288 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQL 288 (611)
T ss_dssp ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEE
T ss_pred ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeE
Confidence 999999999999888777763 79999999999999999999999999999999988765544211
Q ss_pred --------------------------------CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEe-c----
Q 016187 233 --------------------------------PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL-V---- 275 (394)
Q Consensus 233 --------------------------------~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~-~---- 275 (394)
..|...|++++|+|+++++++++.|++|++||+.+++....+ .
T Consensus 289 ~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~ 368 (611)
T 1nr0_A 289 GIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT 368 (611)
T ss_dssp EEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSS
T ss_pred EEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcc
Confidence 236678999999999999999999999999999876543321 0
Q ss_pred -----------------------------------------------------------------------------cCC
Q 016187 276 -----------------------------------------------------------------------------SHT 278 (394)
Q Consensus 276 -----------------------------------------------------------------------------~h~ 278 (394)
.|.
T Consensus 369 ~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~ 448 (611)
T 1nr0_A 369 MITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPIS 448 (611)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECS
T ss_pred eEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecC
Confidence 123
Q ss_pred CCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCc--ceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CeEEE
Q 016187 279 DSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLP--RSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS-GDCVR 355 (394)
Q Consensus 279 ~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~ 355 (394)
..+.+++|+|++++||+|+.|++|++||+..... .....|...|++++|+|++++|++++.|++|++|++.+ ++++.
T Consensus 449 ~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~ 528 (611)
T 1nr0_A 449 YNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAH 528 (611)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESC
T ss_pred CCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceee
Confidence 4577899999999999999999999999876432 12357889999999999999999999999999999987 66655
Q ss_pred E--eecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 356 T--FSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 356 ~--~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
. +.+|...|++++|+||+++|||||.|++|++|++..
T Consensus 529 ~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 529 TNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp CCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred eeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 4 345999999999999999999999999999999864
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.4e-52 Score=405.21 Aligned_cols=325 Identities=28% Similarity=0.516 Sum_probs=296.5
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....+.+|...|++++|+|+ +.+|++++.|+.+++|+. .++....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d-~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w 330 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPD-GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW 330 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCC-CCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Confidence 456677899999999999995 668899999999999996 467778899999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCc
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT 214 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 214 (394)
|... +.+..+.+|...+.+++|+|+++++++++.|+.+++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.
T Consensus 331 ~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 331 NRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 408 (577)
T ss_dssp ETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred eCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE
Confidence 9764 455677889999999999999999999999999999996 45667788899999999999999999999999999
Q ss_pred EEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEE
Q 016187 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAA 294 (394)
Q Consensus 215 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~ 294 (394)
|++||. +++.+..+.+ |...+++++|+|+++++++++.|++|++||+ +++.+..+..|...|.+++|+|++++|+
T Consensus 409 v~~~~~-~~~~~~~~~~---~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~la 483 (577)
T 2ymu_A 409 VKLWNR-NGQLLQTLTG---HSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA 483 (577)
T ss_dssp EEEECT-TCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEE
T ss_pred EEEEeC-CCCEEEEecC---CCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 999995 5666666665 5678999999999999999999999999996 5678888999999999999999999999
Q ss_pred EEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCC
Q 016187 295 TGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD 374 (394)
Q Consensus 295 s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 374 (394)
+++.|++|++||...........|...|++++|+|++++|++++.||.|++||. +++++..+.+|.+.|++++|+||++
T Consensus 484 s~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 484 SASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQ 562 (577)
T ss_dssp EEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSS
T ss_pred EEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCC
Confidence 999999999999876666666789999999999999999999999999999995 7899999999999999999999999
Q ss_pred EEEEEeCCCcEEEEe
Q 016187 375 FLVSVSLDGTARVFE 389 (394)
Q Consensus 375 ~l~s~s~dg~i~iw~ 389 (394)
+|+|+|.|++|++||
T Consensus 563 ~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 563 TIASASSDKTVKLWN 577 (577)
T ss_dssp CEEEEETTSCEEEEC
T ss_pred EEEEEeCCCEEEEeC
Confidence 999999999999997
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.4e-53 Score=393.73 Aligned_cols=289 Identities=24% Similarity=0.495 Sum_probs=272.2
Q ss_pred eEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCC
Q 016187 100 ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (394)
Q Consensus 100 ~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~ 179 (394)
...+.+|.++|++++|+|++.+|++|+.|++|+|||+.+++...++.+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCc
Q 016187 180 RAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (394)
Q Consensus 180 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~ 259 (394)
+.+.+..+.+|...|.+++|+|++++|++|+.|++|++||+++++++..+.+ |...+.++.++|++.++++|+.|++
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC---CCccEEEEEECCCCCEEEEEcCCCe
Confidence 9999999999999999999999999999999999999999999998888875 4678999999999999999999999
Q ss_pred EEEEECCCCcEEEEeccCCCCEEEEEECCC--------------------CCeEEEEeCCCcEEEEeCCCCCcc-eeccC
Q 016187 260 VHMVNITTGKVVSSLVSHTDSIECIGFSRS--------------------SPWAATGSMDQKLIIWDLQHSLPR-STCDH 318 (394)
Q Consensus 260 i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~--------------------~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~ 318 (394)
|++||+.++++...+..|...|.+++|+|+ +.+|++|+.|++|++||+++.... ...+|
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 999999999999999999999999999996 678999999999999999876543 34578
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 319 EDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 319 ~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
...|.+++|+|++++|++|+.||.|++||+.+++++..+.+|...|++++|+|++++|+|||.||+|++|++.
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999863
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-52 Score=378.03 Aligned_cols=288 Identities=24% Similarity=0.419 Sum_probs=266.2
Q ss_pred eeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEe
Q 016187 98 DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (394)
Q Consensus 98 ~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~ 177 (394)
+...++.+|.+.|++++|+|+|++|++|+.|++|++||+.+++....+..|...|.+++|+|+++++++|+.|+.+++|+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcc----ceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEE
Q 016187 178 ADRA----AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALS 253 (394)
Q Consensus 178 ~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 253 (394)
+.+. .....+.+|...|.++.|++++. +++++.|++|++||+.+++.+..+.+ |...|.+++++|++.++++
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG---HTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEE
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC---CCCceEEEEECCCCCEEEE
Confidence 8764 34566789999999999998765 88999999999999999998887765 5678999999999999999
Q ss_pred EeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCC---CCEEEEEEeCC
Q 016187 254 GSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHE---DGVTCLMWLGT 330 (394)
Q Consensus 254 g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~---~~v~~~~~~~~ 330 (394)
|+.|++|++||+++++.+..+..|...|.+++|+|++.+|++++.|++|++||++.........|. ..|++++|+|+
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999876544444333 47999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEe
Q 016187 331 SKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFE 389 (394)
Q Consensus 331 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~ 389 (394)
+++|++|+.||.|++||+.+++.+..+.+|.++|++++|+|++++|+|||.||+|++|+
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999999999999999999999996
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-52 Score=389.73 Aligned_cols=290 Identities=29% Similarity=0.494 Sum_probs=270.7
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd 135 (394)
....+.+|.++|++++|+|+ +.+|+||+.|++|++||+.+++....+.+|.+.|++++|+|+|++|++|+.|++|++||
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~-~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CSCEEECCSSCEEEEEECSS-SSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred ceEeecccCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 35678899999999999995 56899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcE
Q 016187 136 PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (394)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 215 (394)
+.+++.+.++.+|...|.+++|+|++.++++|+.|++|++||+.++.++..+.+|...|.+++|+|++++|++|+.|++|
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCceEEEEcCCCCcccCeEEEEEcCC--------------------CCEEEEEeCCCcEEEEECCCCcEEEEec
Q 016187 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISAD--------------------STLALSGSKDGSVHMVNITTGKVVSSLV 275 (394)
Q Consensus 216 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 275 (394)
++||+.+++....+.. |...+.++.|+|+ +.++++|+.|++|++||+++++++..+.
T Consensus 259 ~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~ 335 (410)
T 1vyh_C 259 RVWVVATKECKAELRE---HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 335 (410)
T ss_dssp EEEETTTCCEEEEECC---CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCceeeEecC---CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE
Confidence 9999999988877765 5667999999996 6789999999999999999999999999
Q ss_pred cCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcc-eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Q 016187 276 SHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPR-STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 276 ~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~ 349 (394)
+|...|.+++|+|++.+|++++.|++|++||+...... ....|...|++++|+|++++|++|+.||+|++|+.+
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99999999999999999999999999999999776443 445788999999999999999999999999999863
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-52 Score=374.02 Aligned_cols=289 Identities=24% Similarity=0.393 Sum_probs=266.2
Q ss_pred eEeecCcccCEEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCce--EEEEecCCCCEEEEEEcCCCCEEEEecCCCeE
Q 016187 100 ASEIQGHKDSVSSLAFSMD----GQLLASGGLDGLVQIWDPSSGNL--KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTV 173 (394)
Q Consensus 100 ~~~~~~h~~~V~~v~~s~~----g~~l~t~s~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i 173 (394)
...+++|.++|++++|+|+ +.+|+||+.|++|+||++..++. ...+.+|...|.+++|+|++.++++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4567899999999999985 67999999999999999887754 44678999999999999999999999999999
Q ss_pred EEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEE
Q 016187 174 WMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALS 253 (394)
Q Consensus 174 ~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 253 (394)
++||+.+++.+..+..|...+.+++|+|++++|++|+.||.|++||+.+++....+.. +...+.+++|+|+++++++
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~---~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT---RGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC---SSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC---CCceEEEEEECCCCCEEEE
Confidence 9999999999999999999999999999999999999999999999999988777664 4567999999999999999
Q ss_pred EeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcc-eeccCCCCEEEEEEeCCCC
Q 016187 254 GSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPR-STCDHEDGVTCLMWLGTSK 332 (394)
Q Consensus 254 g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~ 332 (394)
|+.|+.|++||+++++.+..+.+|..+|.+++|+|++++|++++.|++|++||++..... ...+|...|.+++|+|+++
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 261 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 261 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCC
Confidence 999999999999999999999999999999999999999999999999999999876443 3457889999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 333 YVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 333 ~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
+|++|+.||+|++||+.+++++..+.+|.+.|++++|+|++++|++++.||+|++||+.
T Consensus 262 ~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 262 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999974
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.2e-51 Score=370.06 Aligned_cols=290 Identities=21% Similarity=0.377 Sum_probs=265.7
Q ss_pred ceeeeeccCCcEEEEEEcCC---CCcEEEEecCCCeEEEEEcCCCee--eEeecCcccCEEEEEEcCCCCEEEEEeCCCc
Q 016187 56 STHIFSGHSDEVYSVACSPT---DATLVATGGGDDKGFFWRINQGDW--ASEIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~---~~~~lasg~~d~~v~~w~~~~~~~--~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~ 130 (394)
....+.+|.+.|++|+|+|+ ++.+|+||+.|++|++|++..++. ...+.+|...|.+++|+|++.++++++.|++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 34556799999999999985 356899999999999999987754 4468999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEe
Q 016187 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS 210 (394)
Q Consensus 131 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 210 (394)
|++||+.+++.+..+..+...+..++|+|++++|++++.|+.+++|++.+++....+..|...+.+++|+|++++|++|+
T Consensus 104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc
Confidence 99999999999999988888999999999999999999999999999999988888889999999999999999999999
Q ss_pred CCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCC
Q 016187 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSS 290 (394)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~ 290 (394)
.||.|++||+++++.+..+.+ |...|++++|+|+++++++|+.|++|++||+++++.+..+.+|...|.+++|+|++
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEG---HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 260 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECC---CSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred CCCeEEEEECCCCcEEEEEcc---cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCC
Confidence 999999999999998888775 46679999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCCCcc-eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Q 016187 291 PWAATGSMDQKLIIWDLQHSLPR-STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 291 ~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~ 348 (394)
.+|++++.|++|++||+.+..+. ....|...|.+++|+|++++|++++.||.|++||.
T Consensus 261 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 261 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999876544 34578899999999999999999999999999996
No 9
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.8e-50 Score=393.94 Aligned_cols=327 Identities=29% Similarity=0.520 Sum_probs=298.2
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....+.+|...|.+++|+|+ +.+|++++.|+.+++|+. +++.+..+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 212 ~~~~~~~~~~~~v~~~~~s~d-g~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w 289 (577)
T 2ymu_A 212 QLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLW 289 (577)
T ss_dssp CEEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cEEEEEecCCCCEEEEEECCC-CCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 446678899999999999995 567889999999999996 567788899999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCc
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT 214 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 214 (394)
+. +++....+.+|...|.+++|+|++.++++++.|+.+++|+.... .+..+.+|...+.+++|+|++++|++++.|+.
T Consensus 290 ~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 367 (577)
T 2ymu_A 290 NR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 367 (577)
T ss_dssp ET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 96 46777788999999999999999999999999999999998654 45667889999999999999999999999999
Q ss_pred EEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEE
Q 016187 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAA 294 (394)
Q Consensus 215 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~ 294 (394)
|++||. +++.+..+.. |...|++++|+|+++++++++.|+.|++||. +++.+..+..|...|.+++|+|++++|+
T Consensus 368 v~~~~~-~~~~~~~~~~---~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 368 VKLWNR-NGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp EEEEET-TCCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EEEEcC-CCCEEEEecC---CCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 999995 5666666665 5678999999999999999999999999995 6778889999999999999999999999
Q ss_pred EEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCC
Q 016187 295 TGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD 374 (394)
Q Consensus 295 s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 374 (394)
+++.|++|++||+..........|...|.+++|+|++++|++++.|+.|++|| .++++++.+.+|...|++++|+|+++
T Consensus 443 ~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 443 SASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQ 521 (577)
T ss_dssp EEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEECTTSS
T ss_pred EEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEEcCCCC
Confidence 99999999999987666666678999999999999999999999999999999 47899999999999999999999999
Q ss_pred EEEEEeCCCcEEEEecc
Q 016187 375 FLVSVSLDGTARVFEIA 391 (394)
Q Consensus 375 ~l~s~s~dg~i~iw~~~ 391 (394)
+|++++.||.|++||..
T Consensus 522 ~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 522 TIASASDDKTVKLWNRN 538 (577)
T ss_dssp CEEEEETTSEEEEECTT
T ss_pred EEEEEECcCEEEEEeCC
Confidence 99999999999999964
No 10
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.4e-51 Score=372.41 Aligned_cols=289 Identities=22% Similarity=0.363 Sum_probs=264.4
Q ss_pred eeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEe
Q 016187 98 DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (394)
Q Consensus 98 ~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~ 177 (394)
+....+.+|.+.|++++|+|++++|+||+.|++|++||..+++....+..+...|.+++|+|++.++++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34567899999999999999999999999999999999999999888998999999999999999999999999999999
Q ss_pred CCcc------ceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC--CCC
Q 016187 178 ADRA------AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DST 249 (394)
Q Consensus 178 ~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~ 249 (394)
+... .....+.+|...|.+++|+|+++.|++++.|++|++||+.+++.+..+.+ |...+.++.++| ++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG---HGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECCCSSCC
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC---CCCCeEEEEEEeCCCCC
Confidence 8542 33456778999999999999999999999999999999999998888876 456799999987 568
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceecc---CCCCEEEEE
Q 016187 250 LALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCD---HEDGVTCLM 326 (394)
Q Consensus 250 ~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~ 326 (394)
++++|+.||+|++||+++++++..+..|...|.+++|+|++.+|++++.|++|++||++......... +...+.+++
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD 291 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence 99999999999999999999999999999999999999999999999999999999998754333322 234689999
Q ss_pred EeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEe
Q 016187 327 WLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFE 389 (394)
Q Consensus 327 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~ 389 (394)
|+|++++|++|+.|+.|++||+.+++++..+.+|.+.|++++|+|++++|+||+.||+|++|+
T Consensus 292 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999999999999999999999999999999999999999995
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.3e-51 Score=381.56 Aligned_cols=304 Identities=21% Similarity=0.366 Sum_probs=269.3
Q ss_pred EEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecC
Q 016187 90 FFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE 169 (394)
Q Consensus 90 ~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~ 169 (394)
..|+.....+..++.+|.+.|++++|+|+|++|+||+.|++|+|||+.+++....+..|...|.+++|+|++++|++|+.
T Consensus 49 ~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~ 128 (380)
T 3iz6_a 49 VSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGL 128 (380)
T ss_dssp CCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCS
T ss_pred cccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeC
Confidence 34565666677889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCcc-------ceeeeecccCcCeEEEEECCC-CCeEEEEeCCCcEEEEcCCCCceEEEEcC--CCCcccCe
Q 016187 170 DSTVWMWNADRA-------AYLNMFSGHGSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRG--HPYHTEGL 239 (394)
Q Consensus 170 d~~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~i 239 (394)
|+.+++|++... .....+.+|...+.++.|+|+ +..|++|+.|++|++||+.+++.+..+.. ...|...+
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 999999998642 234567899999999999996 45799999999999999999998877632 13467789
Q ss_pred EEEEEcC-CCCEEEEEeCCCcEEEEECC-CCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceecc
Q 016187 240 TCLTISA-DSTLALSGSKDGSVHMVNIT-TGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCD 317 (394)
Q Consensus 240 ~~~~~~~-~~~~l~~g~~dg~i~i~d~~-~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 317 (394)
.++.+++ ++.++++|+.|++|++||++ .++.+..+.+|...|.+++|+|++.+|++++.|++|++||+++........
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9999977 88999999999999999998 457788899999999999999999999999999999999998764332221
Q ss_pred --------CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEe----ecccCceeEEEEccCCCEEEEEeCCCcE
Q 016187 318 --------HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTF----SGHRDAIQAISVSAHQDFLVSVSLDGTA 385 (394)
Q Consensus 318 --------~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~l~s~s~dg~i 385 (394)
+...|++++|+|++++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|++++|+|||.||+|
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i 368 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL 368 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE
Confidence 2234889999999999999999999999999999988877 6899999999999999999999999999
Q ss_pred EEEeccCC
Q 016187 386 RVFEIADF 393 (394)
Q Consensus 386 ~iw~~~~~ 393 (394)
++|++...
T Consensus 369 ~iW~~~~~ 376 (380)
T 3iz6_a 369 KIWAFSGH 376 (380)
T ss_dssp EEEECCSS
T ss_pred EEEecCCC
Confidence 99998764
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-49 Score=362.37 Aligned_cols=290 Identities=20% Similarity=0.392 Sum_probs=263.8
Q ss_pred CCCceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEE
Q 016187 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (394)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~ 132 (394)
+......+.+|.+.|++++|+|+ +.+|+||+.|+++++||+.+++.+..+..|...|.+++|+|+|++|++|+.|+.|+
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d-~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTD-SRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred cchhheeecCCCCceEEEEECCC-CCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 34567789999999999999995 67899999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCc----eEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEE
Q 016187 133 IWDPSSGN----LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (394)
Q Consensus 133 vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 208 (394)
+|++.+++ ....+.+|.+.|.++.|++++. +++++.|++|++||+.+++.+..+.+|...|.+++|+|++++|++
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 99998753 4566788999999999998875 889999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc--CCCCEEEEEE
Q 016187 209 GSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS--HTDSIECIGF 286 (394)
Q Consensus 209 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--h~~~i~~v~~ 286 (394)
|+.|++|++||+++++....+.+ |...|++++|+|++.++++|+.|++|++||+++++.+..+.. +...|.+++|
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTG---HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EeCCCcEEEEECCCCeeEEEEcC---CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEE
Confidence 99999999999999988888765 567899999999999999999999999999999988776643 3357999999
Q ss_pred CCCCCeEEEEeCCCcEEEEeCCCCCcc-eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Q 016187 287 SRSSPWAATGSMDQKLIIWDLQHSLPR-STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWD 347 (394)
Q Consensus 287 ~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd 347 (394)
+|++.+|++|+.|+.|++||+...... ...+|...|.+++|+|++.+|++|+.||.|++||
T Consensus 279 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999998765443 3457999999999999999999999999999996
No 13
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.6e-50 Score=358.06 Aligned_cols=291 Identities=23% Similarity=0.339 Sum_probs=260.2
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
+...+|.+|.+.|++++|+|+ +.+|+||+.|++|++||+.+++.+..+.+|..+|.+++|+|++++|++|+.|++|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~-~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPT-EPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred eeEEeecCCCCceEEEEECCC-CCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 456789999999999999995 5789999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc-ceeeeecccCcCeEEEEECC-CCCeEEEEeCC
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTP-DGKTICTGSDD 212 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d 212 (394)
|+.+++.+..+.+|.+.|.+++|+|++++|++|+.|++|++||+.++ .....+.+|...|.+++|+| ++.+|++|+.|
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999876 45567889999999999999 67899999999
Q ss_pred CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCC
Q 016187 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSS 290 (394)
Q Consensus 213 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~ 290 (394)
++|++||++++.....+... +...+..+.++| ++.++++|+.|++|++||+++++++..+.+|...|.+++|+|++
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (304)
T ss_dssp SEEEEEETTCSSCSEEEECC--CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CeEEEEECCCCCccceeccC--CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCC
Confidence 99999999887765555432 456788888886 77899999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCCCccee-ccCCCCEEEEEEeCCCC--EEEEEeCCCeEEEEECC
Q 016187 291 PWAATGSMDQKLIIWDLQHSLPRST-CDHEDGVTCLMWLGTSK--YVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 291 ~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~--~l~sg~~dg~i~iwd~~ 349 (394)
++|++++.||+|++||+.+...... ..|...+.+++|+|++. ++++|+.|| +.+|++.
T Consensus 241 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 9999999999999999987655443 45778899999999875 577776554 6677654
No 14
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-49 Score=357.15 Aligned_cols=291 Identities=18% Similarity=0.318 Sum_probs=260.3
Q ss_pred eeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEe
Q 016187 98 DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (394)
Q Consensus 98 ~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~ 177 (394)
+...++.+|.+.|++++|+|+|++|++|+.|++|++||+.+++.+..+..|..+|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 44668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceE-EEEcCCCCcccCeEEEEEcC-CCCEEEEEe
Q 016187 178 ADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENI-HVIRGHPYHTEGLTCLTISA-DSTLALSGS 255 (394)
Q Consensus 178 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~ 255 (394)
+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||++++..+ ..+.+ |...|.+++|+| ++.++++|+
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG---HEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC---CCSCEEEEEECTTCTTEEEEEE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc---cCCcEEEEEECCCCCCEEEEEe
Confidence 9999999999999999999999999999999999999999999887443 44444 567899999999 678999999
Q ss_pred CCCcEEEEECCCCcEEEEe-ccCCCCEEEEEECC--CCCeEEEEeCCCcEEEEeCCCCCcc-eeccCCCCEEEEEEeCCC
Q 016187 256 KDGSVHMVNITTGKVVSSL-VSHTDSIECIGFSR--SSPWAATGSMDQKLIIWDLQHSLPR-STCDHEDGVTCLMWLGTS 331 (394)
Q Consensus 256 ~dg~i~i~d~~~~~~~~~~-~~h~~~i~~v~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~ 331 (394)
.|++|++||++++.....+ ..|...+..+.|+| ++.+|++++.|++|++||+++.... ...+|...|.+++|+|++
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCC
Confidence 9999999999887655544 35668899999987 6789999999999999999876543 345789999999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCC--EEEEEeCCCcEEEEeccC
Q 016187 332 KYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD--FLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 332 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~l~s~s~dg~i~iw~~~~ 392 (394)
++|++|+.||.|++||+.++++++.+..|...+++++|+|++. ++++|+.|| +.+|++.+
T Consensus 241 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 9999999999999999999999999999999999999999875 578777666 77787764
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.8e-49 Score=358.48 Aligned_cols=296 Identities=20% Similarity=0.323 Sum_probs=257.0
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCC-----CeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCc
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ-----GDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~-----~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~ 130 (394)
....|.||.+.|++++|+|.++.+|+||+.|+++++|++.. +..+..+.+|...|.+++|+|+|++|++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 35568899999999999997778999999999999999864 2346788999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEe
Q 016187 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS 210 (394)
Q Consensus 131 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 210 (394)
|++||+.+++....+.+|...|.+++|+|++.++++|+.|++|++|+++. ..+..+.+|...|.+++|+|....
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~----- 162 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKA----- 162 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC--------
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCC-----
Confidence 99999999999999999999999999999999999999999999999964 456677788888888888875420
Q ss_pred CCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCC
Q 016187 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSS 290 (394)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~ 290 (394)
.+++..+++++.|+.|++||+++++....+.+|...|.+++|+|++
T Consensus 163 ----------------------------------~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 163 ----------------------------------DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp -------------------------------------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTS
T ss_pred ----------------------------------CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCC
Confidence 1234567778888888888888887778888999999999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEee--------cccC
Q 016187 291 PWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFS--------GHRD 362 (394)
Q Consensus 291 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~--------~h~~ 362 (394)
.+|++++.|++|++||+..........+...|.+++|+|++.+|++++.+ .+++|++..+..+..+. .|..
T Consensus 209 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 3frx_A 209 TLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEP 287 (319)
T ss_dssp SEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCc
Confidence 99999999999999999887666666667889999999999999988754 59999998888777664 3466
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 363 AIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 363 ~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
.+.+++|+|++++|++|+.||+|++|++.+
T Consensus 288 ~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 288 HAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 789999999999999999999999999864
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-50 Score=364.69 Aligned_cols=296 Identities=22% Similarity=0.364 Sum_probs=252.9
Q ss_pred eeeEeecCccc-CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEE---EecCCCCEEEEEEcCCCCEEEEecCCCeE
Q 016187 98 DWASEIQGHKD-SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT---LEGPGGGVEWVSWHPRGHIVLAGSEDSTV 173 (394)
Q Consensus 98 ~~~~~~~~h~~-~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~s~d~~i 173 (394)
+++.++++|.+ .|++++|+|+|++||+|+.|++|+|||+.++..... ..+|...|.+++|+|++++|++|+.|+++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 45678899998 999999999999999999999999999988764432 25789999999999999999999999999
Q ss_pred EEEeCCcc--ceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEE
Q 016187 174 WMWNADRA--AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLA 251 (394)
Q Consensus 174 ~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 251 (394)
++|+.... +.+..+.+|...|.+++|+|++++|++|+.|++|++||+.++.....+.....|...|.+++|+|++.++
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 99998765 4567788999999999999999999999999999999998775433332223467789999999999999
Q ss_pred EEEeCCCcEEEEECCCCc--EEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcc----------------
Q 016187 252 LSGSKDGSVHMVNITTGK--VVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPR---------------- 313 (394)
Q Consensus 252 ~~g~~dg~i~i~d~~~~~--~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~---------------- 313 (394)
++|+.|++|++||+.+++ +...+.+|...|.+++|+|++.+|++++.|++|++|+.......
T Consensus 166 ~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~ 245 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC 245 (345)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE
T ss_pred EEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE
Confidence 999999999999998875 45678899999999999999999999999999999996321100
Q ss_pred ee-ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCe--------E-EEEeecccCceeEEEEccCC-CEEEEEeCC
Q 016187 314 ST-CDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGD--------C-VRTFSGHRDAIQAISVSAHQ-DFLVSVSLD 382 (394)
Q Consensus 314 ~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~--------~-~~~~~~h~~~v~~l~~~~~~-~~l~s~s~d 382 (394)
.. ..|...|.+++|+|++.+|++++.|+.|++|+...+. . ...+.+|.+.|++|+|+|++ .+|||||.|
T Consensus 246 ~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D 325 (345)
T 3fm0_A 246 TLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD 325 (345)
T ss_dssp EECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT
T ss_pred EecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC
Confidence 01 1277889999999999999999999999999976542 1 22345899999999999997 499999999
Q ss_pred CcEEEEeccCC
Q 016187 383 GTARVFEIADF 393 (394)
Q Consensus 383 g~i~iw~~~~~ 393 (394)
|+|++|++...
T Consensus 326 g~v~~W~~~~~ 336 (345)
T 3fm0_A 326 GEVAFWKYQRP 336 (345)
T ss_dssp SCEEEEEECC-
T ss_pred CcEEEEEecCC
Confidence 99999998754
No 17
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-50 Score=374.62 Aligned_cols=325 Identities=18% Similarity=0.275 Sum_probs=287.5
Q ss_pred eccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEc----CCCe------eeEeecC----------cccCEEEEEEcCCCC
Q 016187 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRI----NQGD------WASEIQG----------HKDSVSSLAFSMDGQ 120 (394)
Q Consensus 61 ~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~----~~~~------~~~~~~~----------h~~~V~~v~~s~~g~ 120 (394)
..|.++|++++|+|++..+||+|+.|+.+++|++ .+++ ....+.. |.+.|++++|+|+|+
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 3466999999999965449999999999999999 8777 3444443 688999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcC-------
Q 016187 121 LLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSS------- 193 (394)
Q Consensus 121 ~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~------- 193 (394)
+|++++.|+.|++|| .+++....+..|...|.+++|+|++++|++++.|+.+++|++.+++.+..+..+...
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 999999999999999 678888889999999999999999999999999999999999998888888777766
Q ss_pred --------eEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 016187 194 --------VTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (394)
Q Consensus 194 --------v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~ 265 (394)
+.+++|+|++ .+++++.||.|++||+.+++.+..+.. |...+.+++++|++.++++++.|+.|++||+
T Consensus 201 ~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIG---HHGPISVLEFNDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp -----CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECC---CSSCEEEEEEETTTTEEEEEETTSCEEEECS
T ss_pred cccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeecc---CCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 8899999875 588999999999999999887777664 5678999999999999999999999999999
Q ss_pred CCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEEEEEeCCCeEE
Q 016187 266 TTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYVVTGCVDGKVR 344 (394)
Q Consensus 266 ~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~ 344 (394)
.+++.+..+..|...|.+++|+|++ ++++++.|+.|++||+....... ...|...+.+++|+|++++|++|+.||.|+
T Consensus 277 ~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 355 (425)
T 1r5m_A 277 GNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVN 355 (425)
T ss_dssp SSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEE
Confidence 9999888898999999999999999 99999999999999998764443 345788999999999999999999999999
Q ss_pred EEECCCCe--------------------EEEEeecccC--ceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 345 VWDSLSGD--------------------CVRTFSGHRD--AIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 345 iwd~~~~~--------------------~~~~~~~h~~--~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
+||+.+++ ++..+.+|.. .|++++|+|++++|++++.||.|++|+++
T Consensus 356 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 356 VYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999888 8899999976 99999999999999999999999999985
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.2e-48 Score=350.08 Aligned_cols=296 Identities=24% Similarity=0.472 Sum_probs=266.4
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....+.+|.+.|++++|+|+ +.+||+|+.|+.+++|++.+++....+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~-~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCC-CCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 346678899999999999995 6789999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCc
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT 214 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 214 (394)
|+.+++.+..+.+|...|.+++|+|+++++++|+.|+.|++||+.+++.+..+..|..+|.+++|+|++++|++++.||.
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGL 172 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred EEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEE
Q 016187 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAA 294 (394)
Q Consensus 215 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~ 294 (394)
|++||+++++.+..+... +...+.+++++|+++++++++.|+.|++||+++++.+..+..|...+.+
T Consensus 173 i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----------- 239 (312)
T 4ery_A 173 CRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYC----------- 239 (312)
T ss_dssp EEEEETTTCCEEEEECCS--SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSC-----------
T ss_pred EEEEECCCCceeeEEecc--CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEE-----------
Confidence 999999998887766432 4567899999999999999999999999999999888777665432211
Q ss_pred EEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCC
Q 016187 295 TGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD 374 (394)
Q Consensus 295 s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 374 (394)
+......+++.+|++|+.||.|++||+.+++++..+.+|.+.|.+++|+|+++
T Consensus 240 ---------------------------~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 240 ---------------------------IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 292 (312)
T ss_dssp ---------------------------CCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS
T ss_pred ---------------------------EEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC
Confidence 11112235678999999999999999999999999999999999999999999
Q ss_pred EEEEEe--CCCcEEEEecc
Q 016187 375 FLVSVS--LDGTARVFEIA 391 (394)
Q Consensus 375 ~l~s~s--~dg~i~iw~~~ 391 (394)
+|++++ .|++|++|+.+
T Consensus 293 ~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 293 IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEEECTTTCCEEEEECC
T ss_pred ceEEEEccCCccEEEecCC
Confidence 999997 69999999865
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.5e-48 Score=355.94 Aligned_cols=291 Identities=21% Similarity=0.342 Sum_probs=263.6
Q ss_pred CCCceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEE
Q 016187 53 PDDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQ 132 (394)
Q Consensus 53 ~~~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~ 132 (394)
+......+.||.+.|++++|+|+ +.+||||+.|+++++||..+++....+..|...|.+++|+|+|.+|++|+.|+.++
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~d-~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~ 131 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCKD-KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCS 131 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEE
T ss_pred ccEEEEEecCCCCeEEEEEECCC-CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEE
Confidence 34567889999999999999995 57899999999999999999998899999999999999999999999999999999
Q ss_pred EEeCCCC------ceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECC--CCC
Q 016187 133 IWDPSSG------NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP--DGK 204 (394)
Q Consensus 133 vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~--~~~ 204 (394)
+|++... .....+..|.+.|.+++|+|++..|++++.|++|++||+.+++.+..+.+|...|.+++|+| +++
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 9998643 24566778999999999999999999999999999999999999999999999999999987 578
Q ss_pred eEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC--CCCEE
Q 016187 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSH--TDSIE 282 (394)
Q Consensus 205 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h--~~~i~ 282 (394)
+|++|+.||+|++||+++++.+..+.. |...|++++|+|++.++++|+.|++|++||+++++.+..+..+ ...+.
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~ 288 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFET---HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecC---CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccccee
Confidence 999999999999999999998887765 5678999999999999999999999999999998877666543 35789
Q ss_pred EEEECCCCCeEEEEeCCCcEEEEeCCCCCcc-eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Q 016187 283 CIGFSRSSPWAATGSMDQKLIIWDLQHSLPR-STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWD 347 (394)
Q Consensus 283 ~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd 347 (394)
+++|+|++.+|++++.|++|++||+.+.... ...+|...|++++|+|++++|++|+.||+|++|+
T Consensus 289 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 289 SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999765433 3457999999999999999999999999999995
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.1e-48 Score=356.92 Aligned_cols=292 Identities=22% Similarity=0.357 Sum_probs=253.5
Q ss_pred eeeEeecCcccCEEEEEE-----cC-CCCEEEEEeCCCcEEEEeCCCC-------ceEEEEecCCCCEEEEEEcCCCCEE
Q 016187 98 DWASEIQGHKDSVSSLAF-----SM-DGQLLASGGLDGLVQIWDPSSG-------NLKCTLEGPGGGVEWVSWHPRGHIV 164 (394)
Q Consensus 98 ~~~~~~~~h~~~V~~v~~-----s~-~g~~l~t~s~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l 164 (394)
+....+++|.+.|++++| ++ ++++|+||+.|++|++||+.++ .....+.+|...|.+++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 345678999999999999 77 9999999999999999998753 3456788999999999999999999
Q ss_pred EEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEE
Q 016187 165 LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTI 244 (394)
Q Consensus 165 ~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~ 244 (394)
++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.. ...........|...+.++.+
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeee
Confidence 9999999999999999999999999999999999999999999999999999999974 333333333356778999999
Q ss_pred cCCC----------CEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCC-CCcc
Q 016187 245 SADS----------TLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQH-SLPR 313 (394)
Q Consensus 245 ~~~~----------~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~ 313 (394)
+|++ .++++++.|++|++|| ...+....+..|...|.+++|+|++.+|++++.|++|++||+.. ....
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 9987 7899999999999999 45677778889999999999999999999999999999999943 3333
Q ss_pred eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEE--Eee-----------cccCceeEEEEccCCCEEEEEe
Q 016187 314 STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVR--TFS-----------GHRDAIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 314 ~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~--~~~-----------~h~~~v~~l~~~~~~~~l~s~s 380 (394)
....+...|.+++|+|+++++++| .|+.|++|++.+++... .+. +|...|++++|+|++++|++|+
T Consensus 250 ~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 250 REFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp EEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred eeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 444456679999999999887655 58889999998876543 443 7888999999999999999999
Q ss_pred CCCcEEEEeccC
Q 016187 381 LDGTARVFEIAD 392 (394)
Q Consensus 381 ~dg~i~iw~~~~ 392 (394)
.||+|++|++++
T Consensus 329 ~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 329 TDGVIRTFSFET 340 (343)
T ss_dssp TTSEEEEEEEEE
T ss_pred CCceEEEEEEEc
Confidence 999999999864
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=357.26 Aligned_cols=300 Identities=23% Similarity=0.412 Sum_probs=251.2
Q ss_pred CceeeeeccCC-cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeE---eecCcccCEEEEEEcCCCCEEEEEeCCCc
Q 016187 55 DSTHIFSGHSD-EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS---EIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (394)
Q Consensus 55 ~~~~~~~~h~~-~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~---~~~~h~~~V~~v~~s~~g~~l~t~s~d~~ 130 (394)
.....+.+|.+ .|++++|+|+ +.+||||+.|++|+||++..++... ...+|...|++++|+|+|++|++|+.|++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~-g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPA-GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTT-SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECCC-CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 34667889998 9999999995 6789999999999999998876442 23789999999999999999999999999
Q ss_pred EEEEeCCCCc--eEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc---ceeeeecccCcCeEEEEECCCCCe
Q 016187 131 VQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA---AYLNMFSGHGSSVTCGDFTPDGKT 205 (394)
Q Consensus 131 i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~ 205 (394)
|++|+...+. ....+.+|...|.+++|+|++++|++|+.|++|++|++... ..+..+.+|...|.+++|+|++++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 9999988774 46678899999999999999999999999999999998765 345677899999999999999999
Q ss_pred EEEEeCCCcEEEEcCCCCce--EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC---------------
Q 016187 206 ICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG--------------- 268 (394)
Q Consensus 206 l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~--------------- 268 (394)
|++|+.|++|++||..+++. ...+.+ |...|++++|+|++++|++|+.|++|++|+....
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~---h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEG---HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecC---CCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 99999999999999987653 344444 5678999999999999999999999999996321
Q ss_pred cEEEEecc-CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCc----c------eeccCCCCEEEEEEeCCC-CEEEE
Q 016187 269 KVVSSLVS-HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLP----R------STCDHEDGVTCLMWLGTS-KYVVT 336 (394)
Q Consensus 269 ~~~~~~~~-h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~----~------~~~~~~~~v~~~~~~~~~-~~l~s 336 (394)
+++..+.. |...|.+++|+|++.+|++++.|+.|++|+...... . ....|...|++++|+|++ .+|++
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence 23445554 889999999999999999999999999999764321 1 123688999999999997 59999
Q ss_pred EeCCCeEEEEECCCCeEEEEee
Q 016187 337 GCVDGKVRVWDSLSGDCVRTFS 358 (394)
Q Consensus 337 g~~dg~i~iwd~~~~~~~~~~~ 358 (394)
|+.||+|++|++.+++.+..+.
T Consensus 322 ~s~Dg~v~~W~~~~~~~~~~~~ 343 (345)
T 3fm0_A 322 CSDDGEVAFWKYQRPEGLHHHH 343 (345)
T ss_dssp EETTSCEEEEEECC--------
T ss_pred cCCCCcEEEEEecCCCCccccc
Confidence 9999999999998887665443
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-48 Score=362.41 Aligned_cols=284 Identities=26% Similarity=0.511 Sum_probs=255.0
Q ss_pred CcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCC------------------CEEEEEEcCCCCEEEE
Q 016187 105 GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGG------------------GVEWVSWHPRGHIVLA 166 (394)
Q Consensus 105 ~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 166 (394)
+|...|.+++|+|+|++||+|+ ++++++|++.+++.+..+..+.. .|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 5999999999999999999986 78999999999988877654432 3899999999999999
Q ss_pred ecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC
Q 016187 167 GSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA 246 (394)
Q Consensus 167 ~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (394)
|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++....+. +...+.+++++|
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~----~~~~v~~~~~~~ 216 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS----IEDGVTTVAVSP 216 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECS
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE----cCCCcEEEEEEC
Confidence 9999999999999999899999999999999999999999999999999999999998776665 345799999999
Q ss_pred -CCCEEEEEeCCCcEEEEECCCCcEEEEe-------ccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCC-------
Q 016187 247 -DSTLALSGSKDGSVHMVNITTGKVVSSL-------VSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSL------- 311 (394)
Q Consensus 247 -~~~~l~~g~~dg~i~i~d~~~~~~~~~~-------~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~------- 311 (394)
++.++++|+.|+.|++||+++++.+..+ .+|...|.+++|+|++.+|++++.|++|++||++...
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 8999999999999999999999888776 5789999999999999999999999999999986531
Q ss_pred ------cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEcc------CCCEEEEE
Q 016187 312 ------PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSA------HQDFLVSV 379 (394)
Q Consensus 312 ------~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~------~~~~l~s~ 379 (394)
.....+|...|.+++|+|++.+|++|+.||.|++||..+++++..+.+|.+.|.+++|++ ++++|+||
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sg 376 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATG 376 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEE
Confidence 112346888999999999999999999999999999999999999999999999999986 68899999
Q ss_pred eCCCcEEEEeccCC
Q 016187 380 SLDGTARVFEIADF 393 (394)
Q Consensus 380 s~dg~i~iw~~~~~ 393 (394)
|.||+|++|++..+
T Consensus 377 s~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 377 SGDCKARIWKYKKI 390 (393)
T ss_dssp ETTSEEEEEEEEEC
T ss_pred CCCCcEEECccccc
Confidence 99999999998754
No 23
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.3e-48 Score=410.83 Aligned_cols=337 Identities=24% Similarity=0.359 Sum_probs=304.8
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....+.+|.+.|++++|+|+ +.+||+|+.|++|++|++.+++.+..+.+|...|.+++|+|+|++|++++.|++|++|
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQD-GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cceEEEecccccEEEEEECCC-CCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 345677899999999999995 6789999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCC
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD 212 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d 212 (394)
|+.+++.+..+.+|...|.+++|+|+ +.++++|+.|+.|++||+.+++.+..+.+|...|++++|+|++++|++++.|
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 99999999999999999999999994 5589999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCCCCceEEEEcCC----------------------------------------------------CCcccCeE
Q 016187 213 ATLRVWNPKSGENIHVIRGH----------------------------------------------------PYHTEGLT 240 (394)
Q Consensus 213 g~i~vwd~~~~~~~~~~~~~----------------------------------------------------~~~~~~i~ 240 (394)
|+|++||+.+++....+... ..|...+.
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE
Confidence 99999999877654433210 13456788
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCC---------
Q 016187 241 CLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSL--------- 311 (394)
Q Consensus 241 ~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~--------- 311 (394)
+++++|++.++++++.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++.|+++++|++....
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~ 924 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ 924 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999964210
Q ss_pred -----------------------------cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccC
Q 016187 312 -----------------------------PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRD 362 (394)
Q Consensus 312 -----------------------------~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~ 362 (394)
......+...+.+++|+|+++++++|+.+|.|++|++.+++.+..+.+|..
T Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~ 1004 (1249)
T 3sfz_A 925 EIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKK 1004 (1249)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSS
T ss_pred eeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCC
Confidence 000112345689999999999999999999999999999999999999999
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 363 AIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 363 ~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
.|++++|+|++++|++++.||.|++|++..
T Consensus 1005 ~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 1005 AVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034 (1249)
T ss_dssp CCCCEEECSSSSCEEEECSSSBEEEEETTT
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 999999999999999999999999999865
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.2e-49 Score=361.51 Aligned_cols=305 Identities=17% Similarity=0.273 Sum_probs=237.9
Q ss_pred EEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeC------CCcEEEEeCCCCce----EEEEecC
Q 016187 79 LVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL------DGLVQIWDPSSGNL----KCTLEGP 148 (394)
Q Consensus 79 ~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~------d~~i~vwd~~~~~~----~~~~~~~ 148 (394)
++.+++++.....|++.... ..+|...|++++|||||++||+|+. |++|++|+..++.. .....+|
T Consensus 18 ~~~~~~g~~~~~~w~~p~~~----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~ 93 (357)
T 4g56_B 18 LYFQSNGSSKGSAWGRPVTA----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQT 93 (357)
T ss_dssp --------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEEC
T ss_pred eEEecCCCccccccCCCCCC----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCC
Confidence 34455667888999976433 3579999999999999999999997 77899999877643 2344568
Q ss_pred CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceee----eecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCc
Q 016187 149 GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN----MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE 224 (394)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 224 (394)
...|.+++|+|++. +++++.|++|++||+.+++... ...+|...|++++|+|++++|++|+.|++|++||+++++
T Consensus 94 ~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 94 EAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp SSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Confidence 88999999999976 5567889999999998765432 344799999999999999999999999999999999999
Q ss_pred eEEEEcCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEe--ccCCCCEEEEEECCCC-CeEEEEeCCC
Q 016187 225 NIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGKVVSSL--VSHTDSIECIGFSRSS-PWAATGSMDQ 300 (394)
Q Consensus 225 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~--~~h~~~i~~v~~~~~~-~~l~s~s~dg 300 (394)
.+..+.+ |...+++++|+|++. ++++++.|++|++||+++++.+..+ ..|...+.+++|+|++ .+|++|+.|+
T Consensus 173 ~~~~~~~---h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~ 249 (357)
T 4g56_B 173 VLKSYNA---HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG 249 (357)
T ss_dssp EEEEECC---CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS
T ss_pred EEEEEcC---CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc
Confidence 8888765 567899999999874 7899999999999999998876554 3467789999999974 6889999999
Q ss_pred cEEEEeCCCCCcc-eeccCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEcc-CCCEEE
Q 016187 301 KLIIWDLQHSLPR-STCDHEDGVTCLMWLGTS-KYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSA-HQDFLV 377 (394)
Q Consensus 301 ~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~ 377 (394)
.|++||++..... ....|...|++++|+|++ ++|++|+.||+|+|||+.++++++.+ +|.+.|++|+|+| ++.+|+
T Consensus 250 ~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~ 328 (357)
T 4g56_B 250 NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFT 328 (357)
T ss_dssp CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEE
T ss_pred ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEE
Confidence 9999999876443 345688899999999987 58999999999999999999888655 7999999999998 799999
Q ss_pred EEeCCCcEEEEeccC
Q 016187 378 SVSLDGTARVFEIAD 392 (394)
Q Consensus 378 s~s~dg~i~iw~~~~ 392 (394)
|||.||+|++|++..
T Consensus 329 s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 329 TVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEETTSCEEEEECC-
T ss_pred EEcCCCeEEEEECCC
Confidence 999999999999864
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.3e-48 Score=352.63 Aligned_cols=322 Identities=20% Similarity=0.329 Sum_probs=283.9
Q ss_pred cCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-
Q 016187 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL- 141 (394)
Q Consensus 63 h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~- 141 (394)
|.++|++++|+|+ +.+++.+..++.+.+|............+|...|++++|+|++++|++++ |+.|++|++.+++.
T Consensus 8 ~~~~v~~~~~s~d-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTAD-GQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECSS-SCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred cCCceeEEEECCC-CCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 5678999999995 56777777777766776555444445558999999999999999999999 99999999987653
Q ss_pred --EEEEe--cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc--eeeeecccCcCeEEEEECCCCCeEEEEeCCCcE
Q 016187 142 --KCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (394)
Q Consensus 142 --~~~~~--~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 215 (394)
...+. .+...|.+++|+|+++++++++.|+.|++|++.+++ ....+.+|...+.+++|+|++++|++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 23333 688899999999999999999999999999998776 566778899999999999999999999999999
Q ss_pred EEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEE
Q 016187 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAAT 295 (394)
Q Consensus 216 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s 295 (394)
++||+++++.+..+.. |...+.+++++|++.++++++.|+.|++||+++++.+..+. +...+.+++|+|++.++++
T Consensus 166 ~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 241 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQG---HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV 241 (337)
T ss_dssp EEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE
T ss_pred EEEeCCCCceeeeeec---ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEE
Confidence 9999999988777765 56789999999999999999999999999999998887764 7889999999999999999
Q ss_pred EeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCE
Q 016187 296 GSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDF 375 (394)
Q Consensus 296 ~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 375 (394)
++.++.|++||+..........|...+.+++|+|++++|++++.||.|++|++.+++.+.. ..|...|.+++|+|++++
T Consensus 242 ~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 242 GMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKY 320 (337)
T ss_dssp EETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCE
T ss_pred EcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCE
Confidence 9999999999998877666778899999999999999999999999999999999988854 458889999999999999
Q ss_pred EEEEeCCCcEEEEecc
Q 016187 376 LVSVSLDGTARVFEIA 391 (394)
Q Consensus 376 l~s~s~dg~i~iw~~~ 391 (394)
|++++.||.|++|++.
T Consensus 321 l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 321 IVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEETTSCEEEEEEE
T ss_pred EEEecCCCeEEEEEEe
Confidence 9999999999999974
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8e-49 Score=357.27 Aligned_cols=288 Identities=19% Similarity=0.220 Sum_probs=242.8
Q ss_pred ccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC-----------eeeEeecCcccCEEEEEEcCCCCEEEEEeCCCc
Q 016187 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-----------DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (394)
Q Consensus 62 ~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~-----------~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~ 130 (394)
.|...|.+++|+|+ +.+|++++ |+++++|+.... ........|...|.+++|+|++ +|++|+.||+
T Consensus 28 ~~~~~v~~~~fs~d-G~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRSD-GALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEECTT-SCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred cccCCEEEEEECCC-CCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 56778999999995 56788776 778888873211 1112223467789999999985 7889999999
Q ss_pred EEEEeCCCCceEEE----EecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCC-e
Q 016187 131 VQIWDPSSGNLKCT----LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-T 205 (394)
Q Consensus 131 i~vwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~ 205 (394)
|+|||+.+++.... +.+|.+.|++++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++. +
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 99999998875433 458999999999999999999999999999999999999999999999999999999875 6
Q ss_pred EEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEE
Q 016187 206 ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECI 284 (394)
Q Consensus 206 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v 284 (394)
|++|+.|++|++||+++++....+... .+...+++++++|+ +.++++|+.||+|++||+++++++.++.+|...|.++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCS-APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGL 263 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEE
T ss_pred eeeeccccccccccccccceeeeeecc-eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 899999999999999999887766432 24456899999995 5688999999999999999999999999999999999
Q ss_pred EECCCC-CeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCeE
Q 016187 285 GFSRSS-PWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSK-YVVTGCVDGKVRVWDSLSGDC 353 (394)
Q Consensus 285 ~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~~~ 353 (394)
+|+|++ .+|++++.|++|+|||+.........+|...|++++|+|+++ +|++|+.||+|++|++.+...
T Consensus 264 ~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999997 589999999999999998887777788999999999999986 567899999999999876543
No 27
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-48 Score=393.23 Aligned_cols=329 Identities=13% Similarity=0.104 Sum_probs=274.1
Q ss_pred eeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 016187 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~ 137 (394)
....||.+.|++++|+|+ +.+||+|+.|++|++|+....+....+. |..+|++++|+| |++|++++.|++|++||+.
T Consensus 11 ~~~~gh~~~V~~lafspd-g~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFT-QNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEEECSSCEEEEEEETT-TTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccccCCCCCcEEEEECCC-CCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 344589999999999995 6799999999999999998877766554 889999999999 8899999999999999999
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcccee-----------eeecccCcCeEEEEECCC-CCe
Q 016187 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL-----------NMFSGHGSSVTCGDFTPD-GKT 205 (394)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~-----------~~~~~h~~~v~~~~~~~~-~~~ 205 (394)
+++.+..+. +.+.|++++|+|+++++++|+.||.|++||+.+++.. ..+.+|...|.+++|+|+ +..
T Consensus 88 ~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 88 SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 999888886 5678999999999999999999999999999877643 334679999999999996 578
Q ss_pred EEEEeCCCcEEEEcCCCCceEEEEcCC---------------CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Q 016187 206 ICTGSDDATLRVWNPKSGENIHVIRGH---------------PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (394)
Q Consensus 206 l~s~~~dg~i~vwd~~~~~~~~~~~~~---------------~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~ 270 (394)
|++|+.||.| +||+++++.+..+..+ ..|...|++++|+|++.++++|+.|++|++||++++++
T Consensus 167 l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 167 VLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp EEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred EEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 9999999999 9999999888777654 22346799999999999999999999999999977654
Q ss_pred EEE--ec---c-------------CCCCEEEE------------------------------------------------
Q 016187 271 VSS--LV---S-------------HTDSIECI------------------------------------------------ 284 (394)
Q Consensus 271 ~~~--~~---~-------------h~~~i~~v------------------------------------------------ 284 (394)
+.. +. . |..+|.++
T Consensus 246 ~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~ 325 (902)
T 2oaj_A 246 IMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMK 325 (902)
T ss_dssp EEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHH
T ss_pred EEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhh
Confidence 321 10 0 01111111
Q ss_pred --------------------------------------------------------------------------------
Q 016187 285 -------------------------------------------------------------------------------- 284 (394)
Q Consensus 285 -------------------------------------------------------------------------------- 284 (394)
T Consensus 326 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~ 405 (902)
T 2oaj_A 326 NYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLAT 405 (902)
T ss_dssp HHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEE
T ss_pred hhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCee
Confidence
Q ss_pred ------------------------------------EECCCCCeEEEEeCCCcEEEEeCCCCCcce---e---------c
Q 016187 285 ------------------------------------GFSRSSPWAATGSMDQKLIIWDLQHSLPRS---T---------C 316 (394)
Q Consensus 285 ------------------------------------~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~---~---------~ 316 (394)
+|+|++++|++|+.|++|++||+....... . .
T Consensus 406 ~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~ 485 (902)
T 2oaj_A 406 TSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNK 485 (902)
T ss_dssp EEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTC
T ss_pred EEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCC
Confidence 123456678888888888888887653221 0 1
Q ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---------------------------------------------
Q 016187 317 DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSG--------------------------------------------- 351 (394)
Q Consensus 317 ~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~--------------------------------------------- 351 (394)
+|...|.+++|+|++++||+|+.||+|++|++.++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 67789999999999999999999999999998765
Q ss_pred eEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 352 DCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 352 ~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
+++..+.+|.+.|++|+|+||| +||+|+.|++|++||+..
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTT
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCC
Confidence 3467888999999999999999 999999999999999864
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-48 Score=351.62 Aligned_cols=291 Identities=21% Similarity=0.331 Sum_probs=240.3
Q ss_pred CCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eEEEE-ec-CCCCEEEEEEcCCCCEEEEecCCC
Q 016187 96 QGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN--LKCTL-EG-PGGGVEWVSWHPRGHIVLAGSEDS 171 (394)
Q Consensus 96 ~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~--~~~~~-~~-~~~~v~~~~~~~~~~~l~~~s~d~ 171 (394)
+.+++..+.+|.++|++++|+|+ +|++|+.|++|++||+.++. ....+ .+ |.+.|.+++|+|++++|++|+.|+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 45667889999999999999997 99999999999999998753 44455 34 889999999999999999999999
Q ss_pred eEEEEeCCc-------cceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCC----ceEEEEcCCCCcccCeE
Q 016187 172 TVWMWNADR-------AAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG----ENIHVIRGHPYHTEGLT 240 (394)
Q Consensus 172 ~i~iw~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~i~ 240 (394)
+|++|+... .+.+..+.+|...|.+++|+|++++|++|+.|++|++||+... +.+..+.+ |...|.
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~---h~~~v~ 157 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQE---HSQDVK 157 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECC---CSSCEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEecc---CCCceE
Confidence 999999853 3456678899999999999999999999999999999999432 33444544 567899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCC--cEEEEeccCCCCEEEEEECCC--CCeEEEEeCCCcEEEEeCCCCC-----
Q 016187 241 CLTISADSTLALSGSKDGSVHMVNITTG--KVVSSLVSHTDSIECIGFSRS--SPWAATGSMDQKLIIWDLQHSL----- 311 (394)
Q Consensus 241 ~~~~~~~~~~l~~g~~dg~i~i~d~~~~--~~~~~~~~h~~~i~~v~~~~~--~~~l~s~s~dg~i~iwd~~~~~----- 311 (394)
++.|+|++.+|++|+.|++|++||+.++ +++..+.+|...|.+++|+|+ +.+|++++.|++|++||+....
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 9999999999999999999999998776 678889999999999999998 6789999999999999985431
Q ss_pred ---cce-ec-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCe--EEEE-eecccC-ceeEEEEcc--CCCEEEEEe
Q 016187 312 ---PRS-TC-DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGD--CVRT-FSGHRD-AIQAISVSA--HQDFLVSVS 380 (394)
Q Consensus 312 ---~~~-~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~-~~~h~~-~v~~l~~~~--~~~~l~s~s 380 (394)
... .. .|...|.+++|++++ +|++|+.||.|++|+..+++ ++.. +.+|.. .|++++|+| ++++|+|||
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 111 11 378899999999654 89999999999999988774 3333 468887 899999999 789999999
Q ss_pred CCCcEEEEeccC
Q 016187 381 LDGTARVFEIAD 392 (394)
Q Consensus 381 ~dg~i~iw~~~~ 392 (394)
.||+|++|+++.
T Consensus 317 ~Dg~v~~W~~~~ 328 (330)
T 2hes_X 317 DDGIVNFWSLEK 328 (330)
T ss_dssp TTSEEEEEEC--
T ss_pred CCCcEEEEEecc
Confidence 999999999865
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-49 Score=366.03 Aligned_cols=294 Identities=23% Similarity=0.401 Sum_probs=258.9
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....|.||.+.|++++|+|+ +.+|+||+.|++|++||+.+++....+.+|...|.+++|+|+|++|++|+.|+.+++|
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~-~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPE-KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTT-SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred EEeecccccccEEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 456779999999999999995 5679999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCc-------eEEEEecCCCCEEEEEEcCCC-CEEEEecCCCeEEEEeCCccceeeee-----cccCcCeEEEEECC
Q 016187 135 DPSSGN-------LKCTLEGPGGGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMF-----SGHGSSVTCGDFTP 201 (394)
Q Consensus 135 d~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d~~i~iw~~~~~~~~~~~-----~~h~~~v~~~~~~~ 201 (394)
++.+.. ....+.+|.+.+.++.|+|++ ..|++|+.|++|++||+.+++.+..+ .+|...|.+++|+|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 986532 234567899999999999974 57999999999999999998877666 67999999999987
Q ss_pred -CCCeEEEEeCCCcEEEEcCCC-CceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCC-
Q 016187 202 -DGKTICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT- 278 (394)
Q Consensus 202 -~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~- 278 (394)
++++|++|+.|++|++||++. ++.+..+.+ |...|++++|+|++.++++|+.|++|++||+++++.+..+..+.
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHG---HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECC---CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECC---cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc
Confidence 889999999999999999974 455666655 56789999999999999999999999999999999888776543
Q ss_pred ------CCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCccee-----ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Q 016187 279 ------DSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRST-----CDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWD 347 (394)
Q Consensus 279 ------~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd 347 (394)
..|.+++|+|++.+|++|+.||.|++||+........ ..|...|++++|+|++++|++|+.||+|++|+
T Consensus 293 ~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 293 RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 2489999999999999999999999999876544322 36889999999999999999999999999999
Q ss_pred CCCCe
Q 016187 348 SLSGD 352 (394)
Q Consensus 348 ~~~~~ 352 (394)
+...+
T Consensus 373 ~~~~~ 377 (380)
T 3iz6_a 373 FSGHR 377 (380)
T ss_dssp CCSSS
T ss_pred cCCCc
Confidence 76543
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.9e-49 Score=360.04 Aligned_cols=291 Identities=18% Similarity=0.221 Sum_probs=244.0
Q ss_pred eeccCCcEEEEEEcCCCCcEEEEecC------CCeEEEEEcCCCeee----EeecCcccCEEEEEEcCCCCEEEEEeCCC
Q 016187 60 FSGHSDEVYSVACSPTDATLVATGGG------DDKGFFWRINQGDWA----SEIQGHKDSVSSLAFSMDGQLLASGGLDG 129 (394)
Q Consensus 60 ~~~h~~~v~~~~~~p~~~~~lasg~~------d~~v~~w~~~~~~~~----~~~~~h~~~V~~v~~s~~g~~l~t~s~d~ 129 (394)
..+|...|++|+|+|+ +.+||||+. |+.+++|+..++... ....+|...|++++|+|+++ +++++.|+
T Consensus 38 p~~H~~~V~~v~fSpD-G~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRD-GALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSS-SCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTS
T ss_pred cccccCCEEEEEECCC-CCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCC
Confidence 3579999999999995 678999987 778999998776543 34457999999999999985 55688899
Q ss_pred cEEEEeCCCCceE----EEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCC-
Q 016187 130 LVQIWDPSSGNLK----CTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK- 204 (394)
Q Consensus 130 ~i~vwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 204 (394)
+|+|||+.+++.. ....+|.+.|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 9999999887643 23457889999999999999999999999999999999999999999999999999999875
Q ss_pred eEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEE
Q 016187 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIEC 283 (394)
Q Consensus 205 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~ 283 (394)
++++++.||+|++||+++++....+... .+...+++++|+|+ +.++++|+.|+.|++||+++++.+..+..|...|.+
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeec-cccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEE
Confidence 7899999999999999988766544332 34567999999997 468889999999999999999999999999999999
Q ss_pred EEECCCC-CeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCeE
Q 016187 284 IGFSRSS-PWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLG-TSKYVVTGCVDGKVRVWDSLSGDC 353 (394)
Q Consensus 284 v~~~~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~ 353 (394)
++|+|++ .+||+++.|++|+|||+++.......+|...|++++|+| ++.+|++|+.||+|++|++.+...
T Consensus 275 l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 275 LAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred EEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 9999987 589999999999999999887777778999999999998 789999999999999999865433
No 31
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.5e-48 Score=353.03 Aligned_cols=294 Identities=19% Similarity=0.243 Sum_probs=239.3
Q ss_pred EEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------CceEEEEecCCCCEEEEEE
Q 016187 89 GFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-----------GNLKCTLEGPGGGVEWVSW 157 (394)
Q Consensus 89 v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~-----------~~~~~~~~~~~~~v~~~~~ 157 (394)
.+.|++.... ...|...|.+++|+|||++|++++ |+++++||... .........+...|.+++|
T Consensus 16 ~r~w~~~~~~----~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (344)
T 4gqb_B 16 AREWNLPPNA----PACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW 90 (344)
T ss_dssp -------CCS----CSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE
T ss_pred ccccCCCCCC----cccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE
Confidence 3567765432 245777899999999999999888 77888887321 0111122234567999999
Q ss_pred cCCCCEEEEecCCCeEEEEeCCccceee----eecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCC
Q 016187 158 HPRGHIVLAGSEDSTVWMWNADRAAYLN----MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP 233 (394)
Q Consensus 158 ~~~~~~l~~~s~d~~i~iw~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 233 (394)
+|++ .+++|+.||+|++||+.+++.+. ...+|...|++++|+|+|++|++|+.|++|++||+.+++.+..+.+
T Consensus 91 s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-- 167 (344)
T 4gqb_B 91 VGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-- 167 (344)
T ss_dssp ETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--
T ss_pred eCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC--
Confidence 9985 67899999999999998876543 3458999999999999999999999999999999999998888876
Q ss_pred CcccCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcEEEEec--cCCCCEEEEEECCC-CCeEEEEeCCCcEEEEeCCC
Q 016187 234 YHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKVVSSLV--SHTDSIECIGFSRS-SPWAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 234 ~~~~~i~~~~~~~~~-~~l~~g~~dg~i~i~d~~~~~~~~~~~--~h~~~i~~v~~~~~-~~~l~s~s~dg~i~iwd~~~ 309 (394)
|...|++++|+|++ .++++|+.|++|++||+++++.+..+. .|...+.+++|+|+ +.+|++|+.|++|++||+++
T Consensus 168 -h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 168 -HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp -CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred -cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 56789999999988 478999999999999999998887764 35567999999985 56889999999999999987
Q ss_pred CCcc-eeccCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCC-EEEEEeCCCcEE
Q 016187 310 SLPR-STCDHEDGVTCLMWLGTS-KYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD-FLVSVSLDGTAR 386 (394)
Q Consensus 310 ~~~~-~~~~~~~~v~~~~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~ 386 (394)
.... ....|...|++++|+|++ ++|++|+.||+|+|||+.+++++ .+.+|.+.|++|+|+|+++ +|+|||.||+|+
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 6544 455789999999999997 58999999999999999998866 5789999999999999986 577999999999
Q ss_pred EEeccC
Q 016187 387 VFEIAD 392 (394)
Q Consensus 387 iw~~~~ 392 (394)
+|++.+
T Consensus 326 ~w~v~~ 331 (344)
T 4gqb_B 326 HHVVPT 331 (344)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999875
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.4e-47 Score=349.59 Aligned_cols=291 Identities=23% Similarity=0.375 Sum_probs=246.9
Q ss_pred CceeeeeccCCcEEEEEE-----cCCCCcEEEEecCCCeEEEEEcCCC-------eeeEeecCcccCEEEEEEcCCCCEE
Q 016187 55 DSTHIFSGHSDEVYSVAC-----SPTDATLVATGGGDDKGFFWRINQG-------DWASEIQGHKDSVSSLAFSMDGQLL 122 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~-----~p~~~~~lasg~~d~~v~~w~~~~~-------~~~~~~~~h~~~V~~v~~s~~g~~l 122 (394)
.....+.||++.|++++| +|.++.+||||+.|++|++|++... .....+.+|...|.+++|+|++.+|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 346778999999999999 7756789999999999999998643 4566789999999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceee--eecccCcCeEEEEEC
Q 016187 123 ASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN--MFSGHGSSVTCGDFT 200 (394)
Q Consensus 123 ~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~ 200 (394)
++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+....... ...+|...|.+++|+
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence 999999999999999999999999999999999999999999999999999999997433222 123788999999999
Q ss_pred CCC----------CeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-Cc
Q 016187 201 PDG----------KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT-GK 269 (394)
Q Consensus 201 ~~~----------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~-~~ 269 (394)
|++ .+|++++.|++|++||. ..+....+.+ |...|++++|+|++++|++|+.|++|++||+.. ..
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~---h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~ 247 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKA---HESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY 247 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcC---ccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence 987 78999999999999994 4555555554 567899999999999999999999999999954 33
Q ss_pred EEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce--e------------ccCCCCEEEEEEeCCCCEEE
Q 016187 270 VVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS--T------------CDHEDGVTCLMWLGTSKYVV 335 (394)
Q Consensus 270 ~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~--~------------~~~~~~v~~~~~~~~~~~l~ 335 (394)
....+ .+...|.+++|+|++.+++++ .|+.+++|++.+..... . .+|...+.+++|+|++++|+
T Consensus 248 ~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~ 325 (343)
T 2xzm_R 248 PQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLF 325 (343)
T ss_dssp CSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEE
T ss_pred cceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEE
Confidence 33333 355679999999999887755 58889999987543221 1 15777899999999999999
Q ss_pred EEeCCCeEEEEECCCC
Q 016187 336 TGCVDGKVRVWDSLSG 351 (394)
Q Consensus 336 sg~~dg~i~iwd~~~~ 351 (394)
+|+.||.|++|++.++
T Consensus 326 sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 326 AGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEETTSEEEEEEEEEE
T ss_pred EecCCceEEEEEEEcc
Confidence 9999999999997654
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-48 Score=348.69 Aligned_cols=288 Identities=22% Similarity=0.352 Sum_probs=238.2
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC--eeeEee-cC-cccCEEEEEEcCCCCEEEEEeCCCcE
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEI-QG-HKDSVSSLAFSMDGQLLASGGLDGLV 131 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~--~~~~~~-~~-h~~~V~~v~~s~~g~~l~t~s~d~~i 131 (394)
....+.+|.++|++++|+|+ +||||+.|++|++|++..+ +....+ .+ |.+.|++++|+|++++|++|+.|++|
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 46778999999999999984 8999999999999999875 445555 44 99999999999999999999999999
Q ss_pred EEEeCCC-------CceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCc----cceeeeecccCcCeEEEEEC
Q 016187 132 QIWDPSS-------GNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR----AAYLNMFSGHGSSVTCGDFT 200 (394)
Q Consensus 132 ~vwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~ 200 (394)
++|++.. .+....+.+|...|.+++|+|++++|++|+.|++|++||+.. .+.+..+.+|...|.+++|+
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 9999853 345677889999999999999999999999999999999943 24567788999999999999
Q ss_pred CCCCeEEEEeCCCcEEEEcCCCC--ceEEEEcCCCCcccCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCC--------
Q 016187 201 PDGKTICTGSDDATLRVWNPKSG--ENIHVIRGHPYHTEGLTCLTISAD--STLALSGSKDGSVHMVNITTG-------- 268 (394)
Q Consensus 201 ~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~g~~dg~i~i~d~~~~-------- 268 (394)
|++++|++|+.|++|++||..++ +++..+.+ |...|.++.|+|+ +.++++|+.|++|++||+..+
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 239 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNG---HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEW 239 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECC---CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccC---CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccccee
Confidence 99999999999999999998766 45556654 5678999999998 678999999999999998754
Q ss_pred cEEEEecc-CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCc--c--eeccCCC-CEEEEEEeC--CCCEEEEEeCC
Q 016187 269 KVVSSLVS-HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLP--R--STCDHED-GVTCLMWLG--TSKYVVTGCVD 340 (394)
Q Consensus 269 ~~~~~~~~-h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~--~--~~~~~~~-~v~~~~~~~--~~~~l~sg~~d 340 (394)
.....+.. |...|.+++|++++ +|++++.||+|++|+...... . ....|.. .|.+++|+| ++++|++|+.|
T Consensus 240 ~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 240 VCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred EEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence 34445554 89999999999765 899999999999999865421 1 1235766 899999999 68999999999
Q ss_pred CeEEEEECCC
Q 016187 341 GKVRVWDSLS 350 (394)
Q Consensus 341 g~i~iwd~~~ 350 (394)
|.|++|++.+
T Consensus 319 g~v~~W~~~~ 328 (330)
T 2hes_X 319 GIVNFWSLEK 328 (330)
T ss_dssp SEEEEEEC--
T ss_pred CcEEEEEecc
Confidence 9999999764
No 34
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-50 Score=373.19 Aligned_cols=330 Identities=10% Similarity=0.154 Sum_probs=284.1
Q ss_pred cCCcEEEEEEcCCCCcEEEEe----------cCCCeEEEEEcCCCe---eeEeecCcccCEEEEEEcCCCCEEEEEeCCC
Q 016187 63 HSDEVYSVACSPTDATLVATG----------GGDDKGFFWRINQGD---WASEIQGHKDSVSSLAFSMDGQLLASGGLDG 129 (394)
Q Consensus 63 h~~~v~~~~~~p~~~~~lasg----------~~d~~v~~w~~~~~~---~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~ 129 (394)
+...|.+++|+|++..+||+| +.|+.+++|++.+++ .+..+ .|...|++++|+|++++|++|+.|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence 345788999999766699999 899999999998875 33333 5899999999999999999999999
Q ss_pred cEEEEeCCC----CceEEEEecCCCCEEEEEEcCC-CCEEEEecCCCeEEEEeCCccc------ee---eeecccCcCeE
Q 016187 130 LVQIWDPSS----GNLKCTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAA------YL---NMFSGHGSSVT 195 (394)
Q Consensus 130 ~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~s~d~~i~iw~~~~~~------~~---~~~~~h~~~v~ 195 (394)
.|++|++.+ .+....+.+|...|.+++|+|+ +++|++++.|+.|++||+.+.+ .. ..+.+|...|.
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCC
T ss_pred eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCee
Confidence 999999987 3577788899999999999998 8899999999999999998765 22 23467999999
Q ss_pred EEEECCC-CCeEEEEeCCCcEEEEcCCCCceEEEEcCCC---CcccCeEEEEEcCCC-CEEEEEeCCC---cEEEEECCC
Q 016187 196 CGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHP---YHTEGLTCLTISADS-TLALSGSKDG---SVHMVNITT 267 (394)
Q Consensus 196 ~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~-~~l~~g~~dg---~i~i~d~~~ 267 (394)
+++|+|+ +.+|++++.||.|++||+++++.+..+..+. .|...+.+++|+|++ .++++++.|+ .|++||+++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~ 249 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN 249 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC
Confidence 9999998 7899999999999999999998887776532 126789999999997 6899999998 999999998
Q ss_pred C-cEEEEec-cCCCCEEEEEECC-CCCeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCC-CEEEEEeCCCe
Q 016187 268 G-KVVSSLV-SHTDSIECIGFSR-SSPWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTS-KYVVTGCVDGK 342 (394)
Q Consensus 268 ~-~~~~~~~-~h~~~i~~v~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~sg~~dg~ 342 (394)
+ +++..+. .|...|.+++|+| ++.+|++++.|++|++||+.+..... ...|...|.+++|+|++ .+|++++.||.
T Consensus 250 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 250 ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSE
T ss_pred CCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCc
Confidence 6 5667777 8999999999999 89999999999999999998765443 34688899999999998 89999999999
Q ss_pred EEEEECCCCeEEEEee-----------------------------------cccCceeEEEEccCCCEEEEEeCCCcEEE
Q 016187 343 VRVWDSLSGDCVRTFS-----------------------------------GHRDAIQAISVSAHQDFLVSVSLDGTARV 387 (394)
Q Consensus 343 i~iwd~~~~~~~~~~~-----------------------------------~h~~~v~~l~~~~~~~~l~s~s~dg~i~i 387 (394)
|++|++.++....... .|..++.+++|+|++++|++++.||+|+|
T Consensus 330 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~ 409 (416)
T 2pm9_A 330 IEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSI 409 (416)
T ss_dssp EEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCC
T ss_pred EEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEE
Confidence 9999988765432211 16778889999999999999999999999
Q ss_pred EeccCC
Q 016187 388 FEIADF 393 (394)
Q Consensus 388 w~~~~~ 393 (394)
|++..-
T Consensus 410 w~~~~~ 415 (416)
T 2pm9_A 410 TNPKIS 415 (416)
T ss_dssp BCCCCC
T ss_pred EEeccC
Confidence 998753
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.5e-48 Score=360.27 Aligned_cols=324 Identities=13% Similarity=0.224 Sum_probs=281.4
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEE
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~ 145 (394)
.+++++|+|+ +.+|++|+.|+.+++|++.+++....+..| ..+....|+|++++|++|+.|+.|++||+.+++....+
T Consensus 58 ~~~~~~~s~~-g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 58 AGKGNTFEKV-GSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp CCTTCEEEEE-ETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred cccceeeeec-CCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 3457899996 556889999999999999988877777777 45566688999999999999999999999999888888
Q ss_pred ecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCce
Q 016187 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN 225 (394)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 225 (394)
..|.+.|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++.
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 89999999999999999999999999999999999998899999999999999999999999999999999999999998
Q ss_pred EEEEcCCCCcccCeEEEEE---------------------cCCCCEEEEEeCCCcEEEEECCCCcEEEEec-cCCCCEEE
Q 016187 226 IHVIRGHPYHTEGLTCLTI---------------------SADSTLALSGSKDGSVHMVNITTGKVVSSLV-SHTDSIEC 283 (394)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~---------------------~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~-~h~~~i~~ 283 (394)
+..+..+..+...+.++.+ +|+++++++|+.||.|++||+++++.+..+. .|...|.+
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCcee
Confidence 8888766555555555554 7889999999999999999999998777764 47889999
Q ss_pred EEECCCCC-eEEEEeCCCcEEEEeCCCCCc--ceecc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--------
Q 016187 284 IGFSRSSP-WAATGSMDQKLIIWDLQHSLP--RSTCD-HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSG-------- 351 (394)
Q Consensus 284 v~~~~~~~-~l~s~s~dg~i~iwd~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~-------- 351 (394)
++|+|++. +|++++.||.|++||++.... ..... |...+.++.+ +++++|++++.||.|++|++...
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~ 374 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIE 374 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEEC
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCcccee
Confidence 99999999 999999999999999987532 23333 6677888755 57889999999999999998763
Q ss_pred -eEEEEeecccCceeEEEEccCCC---EEEEEeCCCcEEEEeccC
Q 016187 352 -DCVRTFSGHRDAIQAISVSAHQD---FLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 352 -~~~~~~~~h~~~v~~l~~~~~~~---~l~s~s~dg~i~iw~~~~ 392 (394)
.....+.+|.+.|.+++|+|+++ .+++++.+|.+++|++++
T Consensus 375 ~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 375 FETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp TTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 22335678899999999999999 788888999999999876
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.4e-46 Score=341.75 Aligned_cols=295 Identities=22% Similarity=0.349 Sum_probs=260.6
Q ss_pred CCCeeeEeecCcccCEEEEEEcCC-CCEEEEEeCCCcEEEEeCCCCc-----eEEEEecCCCCEEEEEEcCCCCEEEEec
Q 016187 95 NQGDWASEIQGHKDSVSSLAFSMD-GQLLASGGLDGLVQIWDPSSGN-----LKCTLEGPGGGVEWVSWHPRGHIVLAGS 168 (394)
Q Consensus 95 ~~~~~~~~~~~h~~~V~~v~~s~~-g~~l~t~s~d~~i~vwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~s 168 (394)
++.++..+|+||.+.|++|+|+|+ +++|+|||.|++|+|||+.+++ ....+.+|...|.+++|+|++++|++++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 344566789999999999999998 6899999999999999987654 3567788999999999999999999999
Q ss_pred CCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCC
Q 016187 169 EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS 248 (394)
Q Consensus 169 ~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (394)
.|+.+++|+............+...+....+++++++|++++.|+.+++||+......... ...|...+.++.+++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQ--DESHSEWVSCVRFSPNS 183 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC--SSSCSSCEEEEEECSCS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEE--eccccCcccceEEccCC
Confidence 9999999999988888888888889999999999999999999999999998765543322 23467789999998864
Q ss_pred --CEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEE
Q 016187 249 --TLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLM 326 (394)
Q Consensus 249 --~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 326 (394)
.++++++.|+.|++||+++++.+..+.+|..+|.+++|+|++++|++++.|++|++||+..........+...+.++.
T Consensus 184 ~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 263 (340)
T 4aow_A 184 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 263 (340)
T ss_dssp SSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeee
Confidence 578899999999999999999999999999999999999999999999999999999999877666667778899999
Q ss_pred EeCCCCEEEEEeCCCeEEEEECCCCeEEEEee---------cccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 327 WLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFS---------GHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 327 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~---------~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
|+|++. +++++.|+.|++||+.++.++..+. +|...|++++|+|++++|+||+.||+|+||++.+
T Consensus 264 ~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 264 FSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp ECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred cCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 999875 4566679999999999888776654 6889999999999999999999999999999875
No 37
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.2e-47 Score=369.97 Aligned_cols=335 Identities=19% Similarity=0.304 Sum_probs=287.4
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCccc---CEEEEEEcCC-CCEEEEEeCCCc
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---SVSSLAFSMD-GQLLASGGLDGL 130 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~---~V~~v~~s~~-g~~l~t~s~d~~ 130 (394)
.....+.+|.+.|++++|+|++..++++|+.|+.+++|++.+++.+..+.+|.. .|++++|+|+ +++|++++.|+.
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 356677899999999999997666899999999999999999999999999999 9999999999 999999999999
Q ss_pred EEEEeCCCCceEEEE-e---cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeeccc----CcCeEEEEECCC
Q 016187 131 VQIWDPSSGNLKCTL-E---GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH----GSSVTCGDFTPD 202 (394)
Q Consensus 131 i~vwd~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h----~~~v~~~~~~~~ 202 (394)
|++||+.+++.+..+ . .|...|.+++|+ ++.++++++.|+.|++|++.+++.+..+..+ ...+.++.|. +
T Consensus 231 i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 308 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-G 308 (615)
T ss_dssp EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-E
T ss_pred EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-C
Confidence 999999999998888 5 889999999999 9999999999999999999998888877766 3677788885 8
Q ss_pred CCeEEEEeCCCcEEEEcCCCCceEEEEcCCC------------------------------CcccCeEEEEEc-------
Q 016187 203 GKTICTGSDDATLRVWNPKSGENIHVIRGHP------------------------------YHTEGLTCLTIS------- 245 (394)
Q Consensus 203 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~------------------------------~~~~~i~~~~~~------- 245 (394)
++++++++.||.|++||+.+++.+..+.+|. .|...+.++.++
T Consensus 309 ~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~ 388 (615)
T 1pgu_A 309 NGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSS 388 (615)
T ss_dssp TTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEE
T ss_pred CCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEE
Confidence 8999999999999999998766655554321 122223333331
Q ss_pred ---------------------------CC--------------------------------------CCEEEEEeC-CCc
Q 016187 246 ---------------------------AD--------------------------------------STLALSGSK-DGS 259 (394)
Q Consensus 246 ---------------------------~~--------------------------------------~~~l~~g~~-dg~ 259 (394)
|+ +.++++++. |+.
T Consensus 389 ~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~ 468 (615)
T 1pgu_A 389 ISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNT 468 (615)
T ss_dssp EETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSC
T ss_pred EeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCe
Confidence 11 455666666 777
Q ss_pred EEEEECCCCcEE-EEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-c-CCCCEEEEEEeC-------
Q 016187 260 VHMVNITTGKVV-SSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-D-HEDGVTCLMWLG------- 329 (394)
Q Consensus 260 i~i~d~~~~~~~-~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~-~~~~v~~~~~~~------- 329 (394)
|++||+.+++.. ..+..|...|.+++|+|++++|++++.|+.|++||+.+....... . |...|++++|+|
T Consensus 469 i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 548 (615)
T 1pgu_A 469 IQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANE 548 (615)
T ss_dssp EEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-----
T ss_pred EEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccc
Confidence 777777766554 566779999999999999999999999999999999876554443 3 889999999999
Q ss_pred ---CCCEEEEEeCCCeEEEEECCCC-eEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 330 ---TSKYVVTGCVDGKVRVWDSLSG-DCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 330 ---~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
++++|++|+.||.|++||+.++ +++..+.+|...|++++|+|+++ |++++.||+|++|+++.
T Consensus 549 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 549 EEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp -CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred cccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9999999999999999999998 78889999999999999999999 99999999999999864
No 38
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.9e-46 Score=365.55 Aligned_cols=335 Identities=17% Similarity=0.237 Sum_probs=278.0
Q ss_pred CceeeeeccCCc-EEEEEEcC--CCCcEEEEecCCCeEEEEEcCCC--------eeeEeecCccc---------------
Q 016187 55 DSTHIFSGHSDE-VYSVACSP--TDATLVATGGGDDKGFFWRINQG--------DWASEIQGHKD--------------- 108 (394)
Q Consensus 55 ~~~~~~~~h~~~-v~~~~~~p--~~~~~lasg~~d~~v~~w~~~~~--------~~~~~~~~h~~--------------- 108 (394)
.....+.+|.+. |++++|+| + +.+||+|+.|+.+++|++.++ +....+.+|..
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~-~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKG-SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTT-CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEecCCCceEEEEEECcCCC-CCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEE
Confidence 567888999999 99999999 6 568999999999999999643 44444444444
Q ss_pred -----------------------------CEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceEEEEecCCC---CEEEE
Q 016187 109 -----------------------------SVSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGNLKCTLEGPGG---GVEWV 155 (394)
Q Consensus 109 -----------------------------~V~~v~~s~~g~-~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~ 155 (394)
.|.+++|+|+++ +|++++.|+.|++||+.+++....+..|.. .|.++
T Consensus 133 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 212 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDV 212 (615)
T ss_dssp EEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEE
T ss_pred EeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEE
Confidence 455555555554 677888889999999999999999999988 99999
Q ss_pred EEcCC-CCEEEEecCCCeEEEEeCCccceeeee-c---ccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEc
Q 016187 156 SWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMF-S---GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIR 230 (394)
Q Consensus 156 ~~~~~-~~~l~~~s~d~~i~iw~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 230 (394)
+|+|+ ++++++++.|+.|++||+.+++.+..+ . +|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+.
T Consensus 213 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 213 EFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 99999 999999999999999999999988888 6 899999999999 99999999999999999999998888776
Q ss_pred CC-CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCC--------------------
Q 016187 231 GH-PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS-------------------- 289 (394)
Q Consensus 231 ~~-~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~-------------------- 289 (394)
.+ ......+.++.++ ++.++++++.|+.|++||+.+++.+..+..|...|.+++| |+
T Consensus 292 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~ 369 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQ 369 (615)
T ss_dssp CCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEEC
T ss_pred CCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcC
Confidence 54 2234567777775 8999999999999999999988888888777766666665 43
Q ss_pred -------------CCeEEEEeCCC--------------------------------------------------------
Q 016187 290 -------------SPWAATGSMDQ-------------------------------------------------------- 300 (394)
Q Consensus 290 -------------~~~l~s~s~dg-------------------------------------------------------- 300 (394)
+.++++++.|+
T Consensus 370 ~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (615)
T 1pgu_A 370 DHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPG 449 (615)
T ss_dssp CCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred cccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCc
Confidence 34444444444
Q ss_pred ------------------cEEEEeCCCCCc--ceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeec-
Q 016187 301 ------------------KLIIWDLQHSLP--RSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSG- 359 (394)
Q Consensus 301 ------------------~i~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~- 359 (394)
.|++||+..... .....|...|++++|+|++++|++|+.||.|++||+.+++++..+.+
T Consensus 450 ~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 529 (615)
T 1pgu_A 450 SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF 529 (615)
T ss_dssp EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC
T ss_pred eEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC
Confidence 444444433222 22345778899999999999999999999999999999999999988
Q ss_pred ccCceeEEEEcc----------CCCEEEEEeCCCcEEEEeccCC
Q 016187 360 HRDAIQAISVSA----------HQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 360 h~~~v~~l~~~~----------~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
|...|++++|+| ++++|++++.||.|++|++...
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 999999999999 9999999999999999998764
No 39
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.4e-46 Score=350.59 Aligned_cols=319 Identities=26% Similarity=0.518 Sum_probs=288.1
Q ss_pred ceeeeeccCCcE-EEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 56 STHIFSGHSDEV-YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 56 ~~~~~~~h~~~v-~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
....+.+|.+.| .++.++ +.+|++|+.|+++++|++.+++.+..+.+|...|.+++|+ +++|++|+.|++|++|
T Consensus 110 ~~~~l~~h~~~v~~~~~~~---g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCLQFC---GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVW 184 (445)
T ss_dssp CCEEEECSTTSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred eeEEecccCCCcEEEEEEc---CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEE
Confidence 456789999875 665553 4689999999999999999999999999999999999998 5699999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCc
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT 214 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 214 (394)
|+.+++....+.+|...|.+++|+ ++.+++|+.|+.|++||+.+++.+..+.+|...+.+++| +++++++|+.||.
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 260 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSC
T ss_pred ECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCE
Confidence 999999999999999999999996 568999999999999999999999999999999999999 7889999999999
Q ss_pred EEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEE
Q 016187 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAA 294 (394)
Q Consensus 215 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~ 294 (394)
|++||+++++.+..+.+ |...+.++.+ ++.++++|+.|+.|++||+++++.+..+..|...+.++.++ +.+++
T Consensus 261 i~iwd~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 333 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQG---HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILV 333 (445)
T ss_dssp EEEEEGGGTEEEEEECC---CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEE
T ss_pred EEEEECCCCcEeEEecC---CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEE
Confidence 99999999988887765 4567999988 78999999999999999999999999999999999998875 56999
Q ss_pred EEeCCCcEEEEeCCCCCcceec----cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEe-----ecccCcee
Q 016187 295 TGSMDQKLIIWDLQHSLPRSTC----DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTF-----SGHRDAIQ 365 (394)
Q Consensus 295 s~s~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-----~~h~~~v~ 365 (394)
+++.||.|++||+.+....... .|...|.+++|+ +++|++|+.||.|++||+.+++.+..+ .+|.+.|+
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 411 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 411 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEE
Confidence 9999999999999876554433 277889999995 589999999999999999999999888 47889999
Q ss_pred EEEEccCCCEEEEEeCCCc----EEEEeccC
Q 016187 366 AISVSAHQDFLVSVSLDGT----ARVFEIAD 392 (394)
Q Consensus 366 ~l~~~~~~~~l~s~s~dg~----i~iw~~~~ 392 (394)
+++|+|++.++++|+.||+ |.+||+..
T Consensus 412 ~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 412 RIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 9999999999999999998 99999874
No 40
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6.7e-46 Score=352.19 Aligned_cols=321 Identities=20% Similarity=0.368 Sum_probs=283.4
Q ss_pred ceeeeeccCCcE-EEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 56 STHIFSGHSDEV-YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 56 ~~~~~~~h~~~v-~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
....+.+|.+.| .++++++ .+|++|+.|++|++||+.+++.+..+.+|.+.|++++|+|++ +|++|+.|++|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~---~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFED---NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEEET---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEECC---CEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 456789999885 6777743 589999999999999999999999999999999999999988 99999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEc--CCCCEEEEecCCCeEEEEeCCccce-----------------------eeeecc
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWH--PRGHIVLAGSEDSTVWMWNADRAAY-----------------------LNMFSG 189 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~s~d~~i~iw~~~~~~~-----------------------~~~~~~ 189 (394)
|+.+++....+.+|.+.|.+++|+ ++++++++|+.|+.|++|++.+... ...+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999999999999999998 4678999999999999999876542 445678
Q ss_pred cCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 016187 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK 269 (394)
Q Consensus 190 h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~ 269 (394)
|...+.++ ++++++|++|+.||.|++||+++++.+..+.+ |...+.++.++|++.++++|+.||.|++||+.+++
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG---HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 88888876 67889999999999999999999998887765 56789999999999999999999999999999999
Q ss_pred EEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Q 016187 270 VVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 270 ~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~ 349 (394)
++..+..|...|.+++++ +.++++++.||+|++||+..........+...+..++|++++++|++|+ ||.|++||+.
T Consensus 344 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 999999999999999998 5799999999999999998876665566777788899999999999998 9999999999
Q ss_pred CCeEEEE-eecccCceeEEEEccCCCEEEEEeCCCcEEEEe
Q 016187 350 SGDCVRT-FSGHRDAIQAISVSAHQDFLVSVSLDGTARVFE 389 (394)
Q Consensus 350 ~~~~~~~-~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~ 389 (394)
++++++. +.+|...|++++|+ ...++++++.||.+.+|-
T Consensus 421 ~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 421 SGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp TCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 9999986 67899999999997 345555666677655543
No 41
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.7e-46 Score=370.59 Aligned_cols=294 Identities=22% Similarity=0.379 Sum_probs=258.3
Q ss_pred eeEeecCcccCEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCC-----ceEEEEecCCCCEEEEEEcCCCCEEEEecCCCe
Q 016187 99 WASEIQGHKDSVSSLAFSMDG-QLLASGGLDGLVQIWDPSSG-----NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDST 172 (394)
Q Consensus 99 ~~~~~~~h~~~V~~v~~s~~g-~~l~t~s~d~~i~vwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~ 172 (394)
....+++|.+.|++|+|+|++ ++|+||+.|++|++|++.+. .....+.+|...|.+++|+|++++|++|+.|++
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 345688999999999999875 79999999999999998764 345678899999999999999999999999999
Q ss_pred EEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCC--CE
Q 016187 173 VWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS--TL 250 (394)
Q Consensus 173 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~ 250 (394)
|++||+.++...+.+.+|...|.+++|+|++++|++|+.|++|++||+..............|...|.+++|+|++ ..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 9999999999999999999999999999999999999999999999987654443333344577889999999987 58
Q ss_pred EEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCC
Q 016187 251 ALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGT 330 (394)
Q Consensus 251 l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 330 (394)
+++|+.|++|++||++++++...+.+|...|.+++|+|++.+|++++.|++|++||+.+........+...+.+++|+|+
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN 613 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSS
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999988766666666778999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeeccc-------------------CceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 331 SKYVVTGCVDGKVRVWDSLSGDCVRTFSGHR-------------------DAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 331 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~-------------------~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
+.+|++++ ++.|++||+.+++++..+..+. ..+++++|+|++++|+||+.||+|++|++.
T Consensus 614 ~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 614 RYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 98887765 6669999999999988775432 137899999999999999999999999997
Q ss_pred CC
Q 016187 392 DF 393 (394)
Q Consensus 392 ~~ 393 (394)
.|
T Consensus 693 ~~ 694 (694)
T 3dm0_A 693 RY 694 (694)
T ss_dssp --
T ss_pred CC
Confidence 64
No 42
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-48 Score=372.79 Aligned_cols=325 Identities=14% Similarity=0.065 Sum_probs=251.5
Q ss_pred cCCcEEEEEEcCCC-C-------cEEEE-------------------ecCCCeEEEEEcCCCeee----EeecCcccCEE
Q 016187 63 HSDEVYSVACSPTD-A-------TLVAT-------------------GGGDDKGFFWRINQGDWA----SEIQGHKDSVS 111 (394)
Q Consensus 63 h~~~v~~~~~~p~~-~-------~~las-------------------g~~d~~v~~w~~~~~~~~----~~~~~h~~~V~ 111 (394)
+.+.|++++|+|.+ + ++||+ ++.|++|+||++.+++.. ..+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 57789999999864 1 45544 668899999999877642 34677889999
Q ss_pred EEEEcCC------CCEEEEEeCCCcEEEEeCCCCce-----------EEEEecCCCCEEEEEEcCCCCEEEEecCCCeEE
Q 016187 112 SLAFSMD------GQLLASGGLDGLVQIWDPSSGNL-----------KCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVW 174 (394)
Q Consensus 112 ~v~~s~~------g~~l~t~s~d~~i~vwd~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~ 174 (394)
+++|+|+ +.+||+++.|++|++||+.+++. ...+.+|...|++++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999997 57999999999999999987642 2467788999999999986 4899999999999
Q ss_pred EEeCCccc-eeeeecccCcCeEEE--EECCCC-CeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCE
Q 016187 175 MWNADRAA-YLNMFSGHGSSVTCG--DFTPDG-KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTL 250 (394)
Q Consensus 175 iw~~~~~~-~~~~~~~h~~~v~~~--~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 250 (394)
+||++++. ....+.+|...|.++ +|+|++ ++|+||+.|++|+|||+++++.+..+.++. ....+.+++|+|++..
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~-~~~~v~~v~fsp~~~~ 369 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF-RGSNLVPVVYCPQIYS 369 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-SCCSCCCEEEETTTTE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc-ccCcccceEeCCCcCe
Confidence 99998763 445678999999999 578888 899999999999999999877655554432 1124778999999999
Q ss_pred EEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-----cCCCCEEEE
Q 016187 251 ALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-----DHEDGVTCL 325 (394)
Q Consensus 251 l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~v~~~ 325 (394)
+++++.|++|++||+++++++.++.+|...|.+++|+|++++|++|+.|++|++||+......... .+...+.++
T Consensus 370 l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v 449 (524)
T 2j04_B 370 YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKW 449 (524)
T ss_dssp EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEEC
T ss_pred EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEe
Confidence 999999999999999999988888899999999999999999999999999999998654322211 111246789
Q ss_pred EEeCCCCEEEEEeCCCeEEEEEC-CCCeEEEEeecccCceeEEEEccCCC---EEEEEeCCCcEEEEeccC
Q 016187 326 MWLGTSKYVVTGCVDGKVRVWDS-LSGDCVRTFSGHRDAIQAISVSAHQD---FLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 326 ~~~~~~~~l~sg~~dg~i~iwd~-~~~~~~~~~~~h~~~v~~l~~~~~~~---~l~s~s~dg~i~iw~~~~ 392 (394)
+|+|+++.+. ... .+++|+. .++.++..+.+|...|++|+|+|+++ .+|+|+.||+||||++..
T Consensus 450 ~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 450 DYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp BCCSSSCEEE-ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 9999998552 222 3334433 25778889999999999999999965 999999999999999863
No 43
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.5e-45 Score=334.89 Aligned_cols=292 Identities=26% Similarity=0.468 Sum_probs=255.1
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe-----eeEeecCcccCEEEEEEcCCCCEEEEEeCCCc
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----WASEIQGHKDSVSSLAFSMDGQLLASGGLDGL 130 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~-----~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~ 130 (394)
...+|.||++.|++|+|+|+++.+|||||.|++|+|||+...+ ....+.+|...|.+++|+|+|++|++++.|+.
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence 3456899999999999999878899999999999999987643 45678999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc-eeeeecccCcCeEEEEECCCC--CeEE
Q 016187 131 VQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA-YLNMFSGHGSSVTCGDFTPDG--KTIC 207 (394)
Q Consensus 131 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~-~~~~~~~h~~~v~~~~~~~~~--~~l~ 207 (394)
|++|+............+...+....+++.+.++++++.|+.+++|+..... ......+|...+.+++|++++ .+++
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEE
Confidence 9999999998888888888899999999999999999999999999987654 344567899999999999864 5788
Q ss_pred EEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEEC
Q 016187 208 TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFS 287 (394)
Q Consensus 208 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~ 287 (394)
+++.|+.|++||+++++.+..+.+ |...|++++|+|+++++++|+.|++|++||+++.+.+..+.. ...|.++.|+
T Consensus 190 s~~~d~~i~i~d~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~ 265 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCKLKTNHIG---HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFS 265 (340)
T ss_dssp EEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEEEC
T ss_pred EEcCCCEEEEEECCCCceeeEecC---CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeeecC
Confidence 999999999999999988877765 567899999999999999999999999999999998888764 4689999999
Q ss_pred CCCCeEEEEeCCCcEEEEeCCCCCcce----------eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCe
Q 016187 288 RSSPWAATGSMDQKLIIWDLQHSLPRS----------TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGD 352 (394)
Q Consensus 288 ~~~~~l~s~s~dg~i~iwd~~~~~~~~----------~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~ 352 (394)
|++.++ +++.|+.|++||++...... ...|...|++++|+|++++|++|+.||.|+|||+.+|+
T Consensus 266 ~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 266 PNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 987655 56679999999997643221 23578889999999999999999999999999999885
No 44
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.2e-46 Score=343.87 Aligned_cols=287 Identities=25% Similarity=0.445 Sum_probs=250.3
Q ss_pred eccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCccc------------------CEEEEEEcCCCCEE
Q 016187 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD------------------SVSSLAFSMDGQLL 122 (394)
Q Consensus 61 ~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~------------------~V~~v~~s~~g~~l 122 (394)
.+|.+.|++++|+|+ +.+||+|+ ++++++|++.+++.+..+.+|.. .|++++|+|+|++|
T Consensus 61 ~~h~~~V~~v~fspd-g~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 61 LDHTSVVCCVKFSND-GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp EECSSCCCEEEECTT-SSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred cCCCCEEEEEEECCC-CCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 479999999999995 56888876 78999999999998888776542 49999999999999
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECC-
Q 016187 123 ASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP- 201 (394)
Q Consensus 123 ~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~- 201 (394)
++|+.|++|++||+.+++....+.+|...|.+++|+|++.+|++++.|++|++||+.+++....+. +...+.+++|+|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999888776664 556799999999
Q ss_pred CCCeEEEEeCCCcEEEEcCCCCceEEEEcCC----CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC---------
Q 016187 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGH----PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG--------- 268 (394)
Q Consensus 202 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~--------- 268 (394)
++++|++|+.|++|++||+++++.+..+... ..|...|.+++|+|++.++++|+.|++|++||+++.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 8999999999999999999998877666321 246778999999999999999999999999999753
Q ss_pred ---cEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeC------CCCEEEEEe
Q 016187 269 ---KVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLG------TSKYVVTGC 338 (394)
Q Consensus 269 ---~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~------~~~~l~sg~ 338 (394)
.+...+.+|...|.+++|+|++.+|++++.|++|++||+.+..... ..+|...|.+++|++ ++++|++|+
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 3456778899999999999999999999999999999998765443 457999999999986 678999999
Q ss_pred CCCeEEEEECCC
Q 016187 339 VDGKVRVWDSLS 350 (394)
Q Consensus 339 ~dg~i~iwd~~~ 350 (394)
.||+|++|++..
T Consensus 378 ~Dg~i~iW~~~~ 389 (393)
T 1erj_A 378 GDCKARIWKYKK 389 (393)
T ss_dssp TTSEEEEEEEEE
T ss_pred CCCcEEECcccc
Confidence 999999998643
No 45
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-46 Score=380.62 Aligned_cols=325 Identities=14% Similarity=0.195 Sum_probs=266.6
Q ss_pred eccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 016187 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN 140 (394)
Q Consensus 61 ~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~ 140 (394)
..|...|++++|+| + .+|++++.|++|++||+.+++.+..+. |...|++++|+|++++|++|+.||+|++||+.+++
T Consensus 55 ~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-G-IYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp CSSCCCEEEEEEET-T-TEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred cCCCCCEEEEEEcC-C-CEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 35888999999999 4 489999999999999999999888886 77899999999999999999999999999999887
Q ss_pred eE-----------EEEecCCCCEEEEEEcCC-CCEEEEecCCCeEEEEeCCccceeeeeccc------------------
Q 016187 141 LK-----------CTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGH------------------ 190 (394)
Q Consensus 141 ~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h------------------ 190 (394)
.. ..+.+|.++|.+++|+|+ +..+++|+.|+.+ +||+++++.++.+.+|
T Consensus 132 ~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 132 LSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred cccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccccc
Confidence 53 123568889999999996 4689999999999 9999998887777655
Q ss_pred CcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEE--Ec---CC---------------------------C-----
Q 016187 191 GSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHV--IR---GH---------------------------P----- 233 (394)
Q Consensus 191 ~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~---~~---------------------------~----- 233 (394)
...|.+++|+|+|++|++|+.||+|++||+++++.+.. +. .+ +
T Consensus 211 ~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~l 290 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSL 290 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEE
Confidence 57799999999999999999999999999876554321 00 00 0
Q ss_pred ------------------------------------------------------------------C----c--------
Q 016187 234 ------------------------------------------------------------------Y----H-------- 235 (394)
Q Consensus 234 ------------------------------------------------------------------~----~-------- 235 (394)
. +
T Consensus 291 l~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~ 370 (902)
T 2oaj_A 291 LISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLI 370 (902)
T ss_dssp EEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEE
T ss_pred EEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEE
Confidence 0 0
Q ss_pred ------------------------------ccCeEEEE----------------------------------EcCCCCEE
Q 016187 236 ------------------------------TEGLTCLT----------------------------------ISADSTLA 251 (394)
Q Consensus 236 ------------------------------~~~i~~~~----------------------------------~~~~~~~l 251 (394)
...+++++ ++|+++++
T Consensus 371 s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~l 450 (902)
T 2oaj_A 371 LGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAF 450 (902)
T ss_dssp ETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEE
T ss_pred cCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEE
Confidence 00111111 24667788
Q ss_pred EEEeCCCcEEEEECCCCcE-----EE-Eec-----cCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCC---------
Q 016187 252 LSGSKDGSVHMVNITTGKV-----VS-SLV-----SHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSL--------- 311 (394)
Q Consensus 252 ~~g~~dg~i~i~d~~~~~~-----~~-~~~-----~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~--------- 311 (394)
++|+.|++|++||+.++.. +. .+. +|...|.+++|+|++++||+|+.||+|+||++.+..
T Consensus 451 aSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~ 530 (902)
T 2oaj_A 451 ITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPE 530 (902)
T ss_dssp EEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------
T ss_pred EEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCC
Confidence 9999999999999877642 11 111 788999999999999999999999999999986441
Q ss_pred -------------------------------------cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE
Q 016187 312 -------------------------------------PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV 354 (394)
Q Consensus 312 -------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 354 (394)
......|...|++++|+|+| +||+|+.|++|++||+.++..+
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~ 609 (902)
T 2oaj_A 531 SGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAII 609 (902)
T ss_dssp -------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEE
T ss_pred CcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEE
Confidence 11223588999999999999 9999999999999999888776
Q ss_pred E-----Eee-cccCceeEEEEc-----cCC---CEEEEEeCCCcEEEEec
Q 016187 355 R-----TFS-GHRDAIQAISVS-----AHQ---DFLVSVSLDGTARVFEI 390 (394)
Q Consensus 355 ~-----~~~-~h~~~v~~l~~~-----~~~---~~l~s~s~dg~i~iw~~ 390 (394)
. .+. +|.+.|++|+|+ ||+ ++|++|+.|++|++|++
T Consensus 610 ~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 610 YMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 4 233 899999999999 885 89999999999999998
No 46
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.5e-46 Score=390.84 Aligned_cols=334 Identities=23% Similarity=0.383 Sum_probs=291.9
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcC--CCCEEEEEeCCCcEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQ 132 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~--~g~~l~t~s~d~~i~ 132 (394)
.....+.+|.+.|.+++|+|+ +.+||+|+.|++|++||+.+++.+..+.+|...|.+++|+| ++.++++|+.|+.|+
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSD-DSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK 726 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEE
T ss_pred CEEEEeccCCCCEEEEEEecC-CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEE
Confidence 456678899999999999995 57899999999999999999999999999999999999999 556899999999999
Q ss_pred EEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeee--------------------------
Q 016187 133 IWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-------------------------- 186 (394)
Q Consensus 133 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~-------------------------- 186 (394)
+||+.+++....+.+|.+.|.+++|+|+++++++++.|+.|++||+.++.....
T Consensus 727 vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 727 LWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp EEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred EEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 999999999999999999999999999999999999999999999865532221
Q ss_pred -----------------------------ecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCccc
Q 016187 187 -----------------------------FSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTE 237 (394)
Q Consensus 187 -----------------------------~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 237 (394)
..+|...+.+++|+|+++++++++.||.|++||+.+++.+..+.+ |..
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---h~~ 883 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG---HLS 883 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC---CSS
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC---Ccc
Confidence 126788899999999999999999999999999998887776654 345
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEE-----------------------------------------------------
Q 016187 238 GLTCLTISADSTLALSGSKDGSVHMVN----------------------------------------------------- 264 (394)
Q Consensus 238 ~i~~~~~~~~~~~l~~g~~dg~i~i~d----------------------------------------------------- 264 (394)
.|++++|+|++.++++++.|++|++|+
T Consensus 884 ~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1249)
T 3sfz_A 884 WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQ 963 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSC
T ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCc
Confidence 566666666666666666666666665
Q ss_pred --------------------------CCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccC
Q 016187 265 --------------------------ITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDH 318 (394)
Q Consensus 265 --------------------------~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 318 (394)
+.+++.+..+..|...|.+++|+|+++++++++.||.|++||+.+........|
T Consensus 964 i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 1043 (1249)
T 3sfz_A 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAH 1043 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCC
T ss_pred EEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecC
Confidence 444555566677999999999999999999999999999999988776667788
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 319 EDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 319 ~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
...+.++.|+|++ .+++++.||.|++||+.+++++..+.+|.+.|++++|+|++++|++++.||+|++|++...
T Consensus 1044 ~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~ 1117 (1249)
T 3sfz_A 1044 QETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLL 1117 (1249)
T ss_dssp SSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSS
T ss_pred CCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCc
Confidence 9999999999965 6788999999999999999999999999999999999999999999999999999998753
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.4e-45 Score=371.79 Aligned_cols=335 Identities=21% Similarity=0.304 Sum_probs=293.4
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
...+.|.+|.+.|.+++|+|+ +.+||+|+.|+.|++|++.+++.+..+.+|..+|++++|+|+|++|++++.|+.|++|
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~-~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPT-EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ccceeeecCCCceEEEEECCC-CCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 346788999999999999995 6788999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc-ceeeeecccCcCeEEEEECC-CCCeEEEEeCC
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTP-DGKTICTGSDD 212 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d 212 (394)
|+.+++....+.+|.+.|.+++|+|++++|++++.|+.|++|++.++ .....+.+|...|.+++|+| +++.|++++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999876 66778889999999999999 88999999999
Q ss_pred CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCC
Q 016187 213 ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSS 290 (394)
Q Consensus 213 g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~ 290 (394)
|+|++||+.+++....+..+ +...+.+++++| ++.++++++.||.|++||+.+++.+..+..|...|.+++|+|++
T Consensus 163 g~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 240 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTL 240 (814)
T ss_dssp SEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred CeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 99999999888776666543 346789999999 99999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCeE----------E----
Q 016187 291 PWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKY-VVTGCVDGKVRVWDSLSGDC----------V---- 354 (394)
Q Consensus 291 ~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~-l~sg~~dg~i~iwd~~~~~~----------~---- 354 (394)
+++++++.||.|++||+.+..... ...|...+.+++|+|++.. +++.+.++.+.+|++..... +
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 320 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGG 320 (814)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECc
Confidence 999999999999999998765443 3456788999999999873 24445577788888654321 1
Q ss_pred -----------------------------EEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 355 -----------------------------RTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 355 -----------------------------~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
..+..+...+.+++|+|+++++++++ ||.+.+|++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~ 387 (814)
T 3mkq_A 321 KNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW 387 (814)
T ss_dssp TTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred ccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccc
Confidence 11233455688999999999999988 899999997643
No 48
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-45 Score=333.23 Aligned_cols=291 Identities=18% Similarity=0.306 Sum_probs=266.2
Q ss_pred eEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCC
Q 016187 100 ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (394)
Q Consensus 100 ~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~ 179 (394)
...+.+|.+.|++++|+|+|++|++++.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++|++.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeecccCcCeEEEEECCCCCeEEEEeCC-----CcEEEEcCCCCce-----------EEEEcCCCCcccCeEEEE
Q 016187 180 RAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD-----ATLRVWNPKSGEN-----------IHVIRGHPYHTEGLTCLT 243 (394)
Q Consensus 180 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~-----------~~~~~~~~~~~~~i~~~~ 243 (394)
+++.+..+. +...+.+++|+|++++|++++.+ +.|++||+..+.. ...+..+. ....+.+++
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 182 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE-GLDAATVAG 182 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT-TCCCEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc-CccceeEEE
Confidence 998888877 88899999999999999999999 9999999876532 12222211 122799999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCC-CcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCE
Q 016187 244 ISADSTLALSGSKDGSVHMVNITT-GKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGV 322 (394)
Q Consensus 244 ~~~~~~~l~~g~~dg~i~i~d~~~-~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v 322 (394)
++|+++++++++.||.|++||+++ ++.+..+..|...|.+++|+|++.+|++++.|+.|++||+..........+...+
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 262 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPL 262 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCE
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCc
Confidence 999999999999999999999998 7888889999999999999999999999999999999999987777667788899
Q ss_pred EEEEEeCCCCEEEEEeCCC--------------eEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEE
Q 016187 323 TCLMWLGTSKYVVTGCVDG--------------KVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVF 388 (394)
Q Consensus 323 ~~~~~~~~~~~l~sg~~dg--------------~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw 388 (394)
.+++|+|+++++++++.++ .+++||..+++.+..+.+|...|++++|+|++++|++++.||.|++|
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw 342 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLH 342 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 9999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred eccC
Q 016187 389 EIAD 392 (394)
Q Consensus 389 ~~~~ 392 (394)
++..
T Consensus 343 ~~~~ 346 (369)
T 3zwl_B 343 HFEK 346 (369)
T ss_dssp EECH
T ss_pred ECcc
Confidence 9863
No 49
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-44 Score=359.13 Aligned_cols=288 Identities=26% Similarity=0.463 Sum_probs=250.6
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC-----eeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcE
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-----DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLV 131 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~-----~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i 131 (394)
...+.+|++.|++|+|+|++..+|+||+.|++|++|++... .....+.+|...|.+++|+|+|++|++|+.|++|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 45688999999999999988889999999999999998753 3456789999999999999999999999999999
Q ss_pred EEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeee---ecccCcCeEEEEECCCC--CeE
Q 016187 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM---FSGHGSSVTCGDFTPDG--KTI 206 (394)
Q Consensus 132 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~---~~~h~~~v~~~~~~~~~--~~l 206 (394)
+|||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||......... ..+|...|.+++|+|++ ..|
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 9999999999999999999999999999999999999999999999865433222 35788999999999986 589
Q ss_pred EEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEE
Q 016187 207 CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (394)
Q Consensus 207 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~ 286 (394)
++|+.|++|++||+++++....+.+ |...|++++++|+++++++|+.|++|++||+++++.+..+.. ...|.+++|
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~---h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~ 610 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAG---HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCF 610 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcC---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEE
Confidence 9999999999999999888877765 567899999999999999999999999999999998877754 568999999
Q ss_pred CCCCCeEEEEeCCCcEEEEeCCCCCcceec--------------------cCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Q 016187 287 SRSSPWAATGSMDQKLIIWDLQHSLPRSTC--------------------DHEDGVTCLMWLGTSKYVVTGCVDGKVRVW 346 (394)
Q Consensus 287 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l~sg~~dg~i~iw 346 (394)
+|++.++++++ ++.|++||+.+....... .+...+++++|+|++++|++|+.||.|++|
T Consensus 611 sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 611 SPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence 99998887765 566999999765332211 011237889999999999999999999999
Q ss_pred ECC
Q 016187 347 DSL 349 (394)
Q Consensus 347 d~~ 349 (394)
++.
T Consensus 690 ~i~ 692 (694)
T 3dm0_A 690 GIG 692 (694)
T ss_dssp EC-
T ss_pred ecc
Confidence 975
No 50
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.9e-45 Score=339.51 Aligned_cols=293 Identities=17% Similarity=0.248 Sum_probs=259.1
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe------eeEeecCcccCEEEEEEcCC----C---CEE
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD------WASEIQGHKDSVSSLAFSMD----G---QLL 122 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~------~~~~~~~h~~~V~~v~~s~~----g---~~l 122 (394)
....+.+|.+.|++++|+| .+|++|+.|++|++|++.+++ ....+.+|..+|++++|+|+ | ++|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 3566789999999999998 589999999999999999887 78888999999999999999 9 999
Q ss_pred EEEeCCCcEEEEeCCCCce-----EEEEecC-----CCCEEEEEEc----CCCCE-EEEecCCCeEEEEeCCc------c
Q 016187 123 ASGGLDGLVQIWDPSSGNL-----KCTLEGP-----GGGVEWVSWH----PRGHI-VLAGSEDSTVWMWNADR------A 181 (394)
Q Consensus 123 ~t~s~d~~i~vwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~s~d~~i~iw~~~~------~ 181 (394)
++++.|+.|++|++.+++. ...+..+ ...|.+++|+ |++++ |++++.|+.|++|++.. .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999998886 7788888 5899999999 99999 99999999999999988 6
Q ss_pred ceee-----eec-------ccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCc---ccCeEEEEEcC
Q 016187 182 AYLN-----MFS-------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYH---TEGLTCLTISA 246 (394)
Q Consensus 182 ~~~~-----~~~-------~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~i~~~~~~~ 246 (394)
+.+. .+. .|...+.+++|+|++ +|++++.||.|++||+++++.+..+.....| ...+.+++|+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 6665 663 488899999999999 9999999999999999999888887752224 67899999999
Q ss_pred CCCEEEEEeCC---CcEEEEECCCCcEEEEecc-------------CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC
Q 016187 247 DSTLALSGSKD---GSVHMVNITTGKVVSSLVS-------------HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHS 310 (394)
Q Consensus 247 ~~~~l~~g~~d---g~i~i~d~~~~~~~~~~~~-------------h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~ 310 (394)
++.++++++.| +.|++||+++++.+..+.. |...|.+++|+|++.+|++++.|+.|++||+...
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999 9999999999999999988 9999999999999999999999999999999876
Q ss_pred Ccceec-------cC---------------CCCEEEEEEeCCC----------CEEEEEeCCCeEEEEECCCCe
Q 016187 311 LPRSTC-------DH---------------EDGVTCLMWLGTS----------KYVVTGCVDGKVRVWDSLSGD 352 (394)
Q Consensus 311 ~~~~~~-------~~---------------~~~v~~~~~~~~~----------~~l~sg~~dg~i~iwd~~~~~ 352 (394)
...... .| ...|++++|+|++ ++|++|+.||.|++|++.+|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 324 ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 443332 45 8899999999998 799999999999999987764
No 51
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.9e-45 Score=338.33 Aligned_cols=291 Identities=16% Similarity=0.208 Sum_probs=259.2
Q ss_pred eEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------eEEEEecCCCCEEEEEEcCC----C---CEEEE
Q 016187 100 ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN------LKCTLEGPGGGVEWVSWHPR----G---HIVLA 166 (394)
Q Consensus 100 ~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~~ 166 (394)
...+.+|.+.|++++|+| ++|++|+.|+.|++|++.+++ ....+.+|...|.+++|+|+ + .+|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 456889999999999999 799999999999999999888 67888899999999999999 9 99999
Q ss_pred ecCCCeEEEEeCCccce-----eeeeccc-----CcCeEEEEEC----CCCCe-EEEEeCCCcEEEEcCCC------Cce
Q 016187 167 GSEDSTVWMWNADRAAY-----LNMFSGH-----GSSVTCGDFT----PDGKT-ICTGSDDATLRVWNPKS------GEN 225 (394)
Q Consensus 167 ~s~d~~i~iw~~~~~~~-----~~~~~~h-----~~~v~~~~~~----~~~~~-l~s~~~dg~i~vwd~~~------~~~ 225 (394)
++.|+.|++|++.+++. +..+..| ...|.+++|+ |++++ |++++.||.|++||+.+ ++.
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 99999999999988776 7788888 5899999999 99999 99999999999999987 554
Q ss_pred EE-----EEcC----CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc---C---CCCEEEEEECCCC
Q 016187 226 IH-----VIRG----HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS---H---TDSIECIGFSRSS 290 (394)
Q Consensus 226 ~~-----~~~~----~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~---h---~~~i~~v~~~~~~ 290 (394)
+. .+.+ ...|...+.+++|+|++ ++++++.|+.|++||+++++.+..+.. | ...|.+++|+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence 44 4422 12356789999999999 999999999999999999999999988 9 9999999999999
Q ss_pred CeEEEEeCC---CcEEEEeCCCCCccee-cc-------------CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeE
Q 016187 291 PWAATGSMD---QKLIIWDLQHSLPRST-CD-------------HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDC 353 (394)
Q Consensus 291 ~~l~s~s~d---g~i~iwd~~~~~~~~~-~~-------------~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 353 (394)
.+|++++.| +.|++||+........ .. |...|.+++|+|++++|++|+.||.|++||+.++++
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 999999999 9999999987654433 34 888999999999999999999999999999999999
Q ss_pred EEEee------cc---------------cCceeEEEEccCC----------CEEEEEeCCCcEEEEeccCC
Q 016187 354 VRTFS------GH---------------RDAIQAISVSAHQ----------DFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 354 ~~~~~------~h---------------~~~v~~l~~~~~~----------~~l~s~s~dg~i~iw~~~~~ 393 (394)
+..+. +| ...|++++|+|++ ++|++++.||.|++|++++-
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 326 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 99999 88 9999999999998 79999999999999998764
No 52
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-45 Score=347.96 Aligned_cols=317 Identities=12% Similarity=0.166 Sum_probs=264.6
Q ss_pred CCceeee-eccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCC---Ce---eeEeecCcccCEEEEEEcCCCCEEEEEe
Q 016187 54 DDSTHIF-SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ---GD---WASEIQGHKDSVSSLAFSMDGQLLASGG 126 (394)
Q Consensus 54 ~~~~~~~-~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~---~~---~~~~~~~h~~~V~~v~~s~~g~~l~t~s 126 (394)
......+ .+|.+.|++++|+|.++.+||||+.|++|++|++.+ +. ....+ +|...|++++|+|++++|++|+
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEe
Confidence 3456667 899999999999994467899999999999999866 43 22223 5999999999999999999999
Q ss_pred CCCcEEEEeCC---CCceEEEEec------------CCCCEEEEE--EcCCCCEEEEecCCCeEEEEeCCccceeeeecc
Q 016187 127 LDGLVQIWDPS---SGNLKCTLEG------------PGGGVEWVS--WHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG 189 (394)
Q Consensus 127 ~d~~i~vwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~ 189 (394)
.|++|++||+. +++....+.. +...+.++. +++++.++++++.|+.|++||+.+++.+..+.+
T Consensus 131 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 131 KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 99999999984 5554433221 445666666 567899999999999999999999999888888
Q ss_pred --cCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEc----CCCCEEEEEeCCCcEEEE
Q 016187 190 --HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTIS----ADSTLALSGSKDGSVHMV 263 (394)
Q Consensus 190 --h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~g~~dg~i~i~ 263 (394)
|...|++++|+|++++|++|+.||+|++||+++++.+..+.. .+...|+++.++ |++.++++|+.|+.|++|
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF--GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC--TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec--CCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 889999999999999999999999999999999888877652 144579999665 467899999999999999
Q ss_pred ECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeE
Q 016187 264 NITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKV 343 (394)
Q Consensus 264 d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i 343 (394)
|+++++.+..+..|...+..+.|+|++..+. +.. .....|...|++++|+ ++++|++|+.||.|
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~-----------~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i 352 (437)
T 3gre_A 289 NFVKGHCQYAFINSDEQPSMEHFLPIEKGLE----ELN-----------FCGIRSLNALSTISVS-NDKILLTDEATSSI 352 (437)
T ss_dssp ETTTTEEEEEEESSSSCCCGGGGSCBCSSGG----GCC-----------CCCCCSGGGGCCEEEE-TTEEEEEEGGGTEE
T ss_pred EcCCCcEEEEEEcCCCCCccceecccccccc----cce-----------ecccccCCceEEEEEC-CceEEEecCCCCeE
Confidence 9999999999999999998888998876551 111 0012267789999999 77899999999999
Q ss_pred EEEECCCCeEEEEeec-------------------------------------ccCceeEEEEccC--CCEEEEEeCCCc
Q 016187 344 RVWDSLSGDCVRTFSG-------------------------------------HRDAIQAISVSAH--QDFLVSVSLDGT 384 (394)
Q Consensus 344 ~iwd~~~~~~~~~~~~-------------------------------------h~~~v~~l~~~~~--~~~l~s~s~dg~ 384 (394)
++||+.+++++..+.+ |.+.|++++|+++ +.+|+||+.||.
T Consensus 353 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 353 VMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp EEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred EEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCce
Confidence 9999999888777765 8899999999998 789999999999
Q ss_pred EEEEe
Q 016187 385 ARVFE 389 (394)
Q Consensus 385 i~iw~ 389 (394)
|+||+
T Consensus 433 I~iw~ 437 (437)
T 3gre_A 433 IGIFQ 437 (437)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99995
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-43 Score=321.98 Aligned_cols=283 Identities=21% Similarity=0.354 Sum_probs=255.9
Q ss_pred eeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeE---eec--CcccCEEEEEEcCCCCEEEEEeCCCcEEE
Q 016187 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS---EIQ--GHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (394)
Q Consensus 59 ~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~---~~~--~h~~~V~~v~~s~~g~~l~t~s~d~~i~v 133 (394)
...+|.+.|++++|+|+ +.+|++++ |+.+++|++.+++... .+. +|...|.+++|+|++++|++++.|+.|++
T Consensus 46 ~~~~h~~~v~~~~~~~~-~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNP-TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EEECCSSCCCEEEECSS-SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred eeccCCCceEEEEEecC-CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 34589999999999995 66888888 9999999998765332 233 79999999999999999999999999999
Q ss_pred EeCCCCc--eEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeC
Q 016187 134 WDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD 211 (394)
Q Consensus 134 wd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 211 (394)
||+.+++ ....+..+...+.+++|+|+++++++++.|+.|++|++.+++.+..+.+|...+.+++|+|++++|++++.
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 9999887 55677888899999999999999999999999999999999988999999999999999999999999999
Q ss_pred CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCC
Q 016187 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSP 291 (394)
Q Consensus 212 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~ 291 (394)
||.|++||+++++.+..+. +...+.+++++|++.++++++.++.|++||+.+++.. .+..|...|.+++|+|+++
T Consensus 204 dg~i~~~d~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHD----FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGK 278 (337)
T ss_dssp TSEEEEEETTTTEEEEEEE----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCceEeeec----CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCC
Confidence 9999999999988777664 4567999999999999999999999999999988754 6778999999999999999
Q ss_pred eEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Q 016187 292 WAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 292 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~ 348 (394)
+|++++.||.|++||+..........|...+.+++|+|++++|++++.||.|++|++
T Consensus 279 ~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 279 WFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 999999999999999988776666778899999999999999999999999999985
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.6e-44 Score=332.76 Aligned_cols=293 Identities=14% Similarity=0.190 Sum_probs=249.4
Q ss_pred EEEcCCCeeeEeecCcccCEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCceEEEEe--cCCCCEEEEEEcC-CCCEEEE
Q 016187 91 FWRINQGDWASEIQGHKDSVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGNLKCTLE--GPGGGVEWVSWHP-RGHIVLA 166 (394)
Q Consensus 91 ~w~~~~~~~~~~~~~h~~~V~~v~~s~~g-~~l~t~s~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~ 166 (394)
+|++...+....+.+|...|++++|+|++ ++|++|+.|+.|++||+.+++....+. +|...|.+++|+| ++++|++
T Consensus 57 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 57 IRSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp HHHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred cccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 34445666777889999999999999999 999999999999999999988877765 5889999999999 6789999
Q ss_pred ecCCCeEEEEeCCccceeeeecc---cCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEE
Q 016187 167 GSEDSTVWMWNADRAAYLNMFSG---HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLT 243 (394)
Q Consensus 167 ~s~d~~i~iw~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~ 243 (394)
++.|+.|++||+.+. .+..+.. |...|.+++|+|++++|++|+.|+.|++||+ +++.+..+.. |...|.+++
T Consensus 137 ~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~---h~~~v~~~~ 211 (383)
T 3ei3_B 137 SSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL---HKAKVTHAE 211 (383)
T ss_dssp EETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC---SSSCEEEEE
T ss_pred EeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc---CCCcEEEEE
Confidence 999999999999863 3444433 4578999999999999999999999999999 4666666665 567899999
Q ss_pred EcCCCC-EEEEEeCCCcEEEEECCC----CcEEEEeccCCCCEEEEEECC-CCCeEEEEeCCCcEEEEeCCCCCcce-ec
Q 016187 244 ISADST-LALSGSKDGSVHMVNITT----GKVVSSLVSHTDSIECIGFSR-SSPWAATGSMDQKLIIWDLQHSLPRS-TC 316 (394)
Q Consensus 244 ~~~~~~-~l~~g~~dg~i~i~d~~~----~~~~~~~~~h~~~i~~v~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~-~~ 316 (394)
|+|++. ++++|+.|+.|++||+++ +.++..+ .|...|.+++|+| ++.+|++++.|+.|++||++...... ..
T Consensus 212 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 212 FNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp ECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred ECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 999999 999999999999999987 6666666 6999999999999 99999999999999999997653321 11
Q ss_pred cC-------C----------CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeec--ccCceeEEEEccCCCEEE
Q 016187 317 DH-------E----------DGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSG--HRDAIQAISVSAHQDFLV 377 (394)
Q Consensus 317 ~~-------~----------~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~ 377 (394)
.| . ..+.+++|+|++++ +|+.||.|++||+.+++++..+.+ |...+..++|+|++++|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~ 368 (383)
T 3ei3_B 291 IHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLA 368 (383)
T ss_dssp ECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEE
T ss_pred cccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEE
Confidence 11 1 33455667777776 778999999999999999999987 567788889999999999
Q ss_pred EEeCCCcEEEEeccC
Q 016187 378 SVSLDGTARVFEIAD 392 (394)
Q Consensus 378 s~s~dg~i~iw~~~~ 392 (394)
+|+ ||.|++|++++
T Consensus 369 s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 369 SGM-GFNILIWNRED 382 (383)
T ss_dssp EEE-TTEEEEEECC-
T ss_pred Eec-CCcEEEEecCC
Confidence 998 99999999874
No 55
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5e-45 Score=333.50 Aligned_cols=298 Identities=15% Similarity=0.248 Sum_probs=251.5
Q ss_pred CCCCceeeeeccCCcEEEEEEcCCCCcEEEEecC---CCeEEEEEcCCCeeeEee-cCcccCEEEEEEcCC---CCEEEE
Q 016187 52 QPDDSTHIFSGHSDEVYSVACSPTDATLVATGGG---DDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMD---GQLLAS 124 (394)
Q Consensus 52 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~---d~~v~~w~~~~~~~~~~~-~~h~~~V~~v~~s~~---g~~l~t 124 (394)
.|.....++.+|.+.|++++|+|++..++++|+. |+.+++|++.+++..... .+|..+|.+++|+|+ |++|++
T Consensus 6 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 6 KPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp CCCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred hhHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 3444567778999999999999987788888887 999999999988765443 479999999999999 699999
Q ss_pred EeCCCcEEEEeCCCCc-eEEEEecCCCCEEEEEE------cCCCCEEEEecCCCeEEEEeCCccc-eeeeecccCc----
Q 016187 125 GGLDGLVQIWDPSSGN-LKCTLEGPGGGVEWVSW------HPRGHIVLAGSEDSTVWMWNADRAA-YLNMFSGHGS---- 192 (394)
Q Consensus 125 ~s~d~~i~vwd~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~s~d~~i~iw~~~~~~-~~~~~~~h~~---- 192 (394)
|+.|+.|++||+.+++ ....+.+|...|.+++| +|++++|++++.|+.|++||+.++. .+..+..|..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 9999999999999988 78889999999999955 6789999999999999999998876 5666665544
Q ss_pred CeEEEE----ECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC---CCCEEEEEeCCCcEEEEEC
Q 016187 193 SVTCGD----FTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA---DSTLALSGSKDGSVHMVNI 265 (394)
Q Consensus 193 ~v~~~~----~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~g~~dg~i~i~d~ 265 (394)
.+.+++ |+|++++|++++.||.|++||+++++...... +...+.++.|+| ++.++++++.||.|++||+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 788888 78899999999999999999999887654432 467899999999 9999999999999999999
Q ss_pred CCCcEEEE-----eccCCCCEEEEEECCCCC-eEEEEeCCCcEEEEeCCCCCc--------------------ceeccCC
Q 016187 266 TTGKVVSS-----LVSHTDSIECIGFSRSSP-WAATGSMDQKLIIWDLQHSLP--------------------RSTCDHE 319 (394)
Q Consensus 266 ~~~~~~~~-----~~~h~~~i~~v~~~~~~~-~l~s~s~dg~i~iwd~~~~~~--------------------~~~~~~~ 319 (394)
++++.+.. +..|...|.+++|+|+++ ++++++.||.|++||+..... .....|.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC
Confidence 87654333 348999999999999998 899999999999999864321 2234688
Q ss_pred CCEEEEEEeCCCCEEE-EEeCCCeEEEEECCCCeE
Q 016187 320 DGVTCLMWLGTSKYVV-TGCVDGKVRVWDSLSGDC 353 (394)
Q Consensus 320 ~~v~~~~~~~~~~~l~-sg~~dg~i~iwd~~~~~~ 353 (394)
..|++++|+|++++|+ +|+.||.|++||+.+.+.
T Consensus 322 ~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 322 QPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 8999999999999998 899999999999877654
No 56
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-43 Score=321.33 Aligned_cols=297 Identities=16% Similarity=0.247 Sum_probs=263.8
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....+.+|.+.|++++|+|+ +.+|++|+.|+.+++|++.+++.+..+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKE-GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTT-SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCC-CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 345668999999999999995 6789999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCC-----CeEEEEeCCccc-----------eeeeecccCc--CeEE
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAA-----------YLNMFSGHGS--SVTC 196 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d-----~~i~iw~~~~~~-----------~~~~~~~h~~--~v~~ 196 (394)
|+.+++.+..+. +...+.+++|+|+++++++++.+ +.+++|++.... ....+..|.. .+.+
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999888877 77899999999999999999998 999999986543 2334455655 8999
Q ss_pred EEECCCCCeEEEEeCCCcEEEEcCCC-CceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 016187 197 GDFTPDGKTICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (394)
Q Consensus 197 ~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 275 (394)
++|+|++++|++++.||.|++||+++ ++.+..+.. |...+.+++|+|++.++++++.|+.|++||+.+++.+..+.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL---HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec---CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 99999999999999999999999998 566666654 56789999999999999999999999999999999888876
Q ss_pred cCCCCEEEEEECCCCCeEEEEeCCC--------------cEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEEEEEeCC
Q 016187 276 SHTDSIECIGFSRSSPWAATGSMDQ--------------KLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYVVTGCVD 340 (394)
Q Consensus 276 ~h~~~i~~v~~~~~~~~l~s~s~dg--------------~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~sg~~d 340 (394)
+...+.+++|+|++.++++++.++ .+++||+....... ...|...|++++|+|++++|++|+.|
T Consensus 258 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 258 -TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp -CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred -CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCC
Confidence 788999999999999999999988 89999998765443 35688999999999999999999999
Q ss_pred CeEEEEECCCCeEEEEe
Q 016187 341 GKVRVWDSLSGDCVRTF 357 (394)
Q Consensus 341 g~i~iwd~~~~~~~~~~ 357 (394)
|.|++|++.++.....+
T Consensus 337 g~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 337 GFIRLHHFEKSYFDFKY 353 (369)
T ss_dssp SEEEEEEECHHHHTCCC
T ss_pred CeEEEEECccccchhHH
Confidence 99999998776544333
No 57
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.2e-45 Score=345.95 Aligned_cols=305 Identities=15% Similarity=0.163 Sum_probs=244.1
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCee--eEeecCcccCEEEEEEcC-CCCEEEEEeCCCcEEE
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW--ASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQI 133 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~--~~~~~~h~~~V~~v~~s~-~g~~l~t~s~d~~i~v 133 (394)
.....+|...|++|+|||.++.+||+|+.||+|+|||+.+++. ...+.+|.+.|++|+|+| ++++|+||+.|++|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 3445689999999999998888999999999999999987654 345678999999999998 6899999999999999
Q ss_pred EeCCCCceEEEEec--CCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCC-eEEEEe
Q 016187 134 WDPSSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-TICTGS 210 (394)
Q Consensus 134 wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 210 (394)
||+.++........ +...+.+++|+|++.+|++|+.|+.|++||++. +.+..+.+|...|.+++|+|+++ +|++|+
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEec
Confidence 99987654433332 234578899999999999999999999999865 45677889999999999999876 688999
Q ss_pred CCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCC------EEEE
Q 016187 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDS------IECI 284 (394)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~------i~~v 284 (394)
.|++|++||+++.+....+.....|...|++++|+|++.+|++++.|++|++||+.++.....+..|... +...
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBC
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEE
Confidence 9999999999887654444333457788999999999999999999999999999998877777665432 1223
Q ss_pred EECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEE-eCCCeEEEEECCCCeEEEEee-cccC
Q 016187 285 GFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTG-CVDGKVRVWDSLSGDCVRTFS-GHRD 362 (394)
Q Consensus 285 ~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~-~h~~ 362 (394)
.|+|++.+++++ +++++..++.+ ..++.|++||..+++++..+. +|..
T Consensus 351 ~~~~~~~~~~~~------------------------------~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~ 400 (435)
T 4e54_B 351 AWHPRYNLIVVG------------------------------RYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESS 400 (435)
T ss_dssp EECSSSSCEEEE------------------------------CCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCC
T ss_pred EEcCCCCEEEEE------------------------------EcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCC
Confidence 444444444333 33444443333 345679999999999988864 7888
Q ss_pred ceeEE-EEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 363 AIQAI-SVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 363 ~v~~l-~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
.|.++ +|+|++++|++|+ |++|+||++++-
T Consensus 401 ~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 401 GISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp CCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred cEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 89887 6999999999887 789999998764
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.7e-44 Score=328.65 Aligned_cols=292 Identities=16% Similarity=0.279 Sum_probs=249.6
Q ss_pred EeecCcccCEEEEEEcCCCCEE-EEEeC---CCcEEEEeCCCCceEEEE-ecCCCCEEEEEEcCC---CCEEEEecCCCe
Q 016187 101 SEIQGHKDSVSSLAFSMDGQLL-ASGGL---DGLVQIWDPSSGNLKCTL-EGPGGGVEWVSWHPR---GHIVLAGSEDST 172 (394)
Q Consensus 101 ~~~~~h~~~V~~v~~s~~g~~l-~t~s~---d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~s~d~~ 172 (394)
..+.+|.+.|++++|+|++..+ ++|+. |+.|++||+.+++..... .+|...|.+++|+|+ +.+|++++.|+.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 3457899999999999999655 56665 999999999988765443 367889999999998 699999999999
Q ss_pred EEEEeCCccc-eeeeecccCcCeEEEE------ECCCCCeEEEEeCCCcEEEEcCCCCc-eEEEEcCCCCc-ccCeEEEE
Q 016187 173 VWMWNADRAA-YLNMFSGHGSSVTCGD------FTPDGKTICTGSDDATLRVWNPKSGE-NIHVIRGHPYH-TEGLTCLT 243 (394)
Q Consensus 173 i~iw~~~~~~-~~~~~~~h~~~v~~~~------~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~-~~~i~~~~ 243 (394)
|++|++.+++ .+..+.+|...|.+++ |+|++++|++++.||.|++||+.+++ .+..+..+..+ ...+.++.
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 9999999887 7888899999999995 57899999999999999999999886 56666554332 34688888
Q ss_pred ----EcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECC---CCCeEEEEeCCCcEEEEeCCCCCccee-
Q 016187 244 ----ISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSR---SSPWAATGSMDQKLIIWDLQHSLPRST- 315 (394)
Q Consensus 244 ----~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~---~~~~l~s~s~dg~i~iwd~~~~~~~~~- 315 (394)
++|++.++++++.|+.|++||+++++.... ..|...|.+++|+| ++.++++++.||.|++||++.......
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 788999999999999999999999887544 56889999999999 899999999999999999876433222
Q ss_pred -----ccCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCC-------------------eEEEEeecccCceeEEEEc
Q 016187 316 -----CDHEDGVTCLMWLGTSK-YVVTGCVDGKVRVWDSLSG-------------------DCVRTFSGHRDAIQAISVS 370 (394)
Q Consensus 316 -----~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~iwd~~~~-------------------~~~~~~~~h~~~v~~l~~~ 370 (394)
..|...|++++|+|+++ +|++|+.||.|++||+.++ +++..+.+|..+|++++|+
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s 330 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWS 330 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEEC
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEc
Confidence 26889999999999998 8999999999999998754 4677889999999999999
Q ss_pred cCCCEEE-EEeCCCcEEEEeccCC
Q 016187 371 AHQDFLV-SVSLDGTARVFEIADF 393 (394)
Q Consensus 371 ~~~~~l~-s~s~dg~i~iw~~~~~ 393 (394)
|++++|+ +++.||.|++|++..+
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCCeEEEEecCCCcEEEEECCCc
Confidence 9999998 8999999999999875
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.9e-44 Score=328.96 Aligned_cols=289 Identities=18% Similarity=0.233 Sum_probs=253.0
Q ss_pred eeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe--eeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 016187 59 IFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (394)
Q Consensus 59 ~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~--~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~ 136 (394)
.+..|.++|++++|+|+ +.+||+|+.|+.+++|++.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 3 ~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKD-RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp EEESCSSCCCEEEECTT-SSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred eecccCCCeEEEEECCC-CCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 45679999999999995 6789999999999999999987 78889999999999999999999999999999999999
Q ss_pred CCCceEEEE--ecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc----eeeeecccCcCeEEEEECCCCCeEEEEe
Q 016187 137 SSGNLKCTL--EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA----YLNMFSGHGSSVTCGDFTPDGKTICTGS 210 (394)
Q Consensus 137 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 210 (394)
.+++....+ ..+...|.+++|+|++++|++++.|+.+++|++.... ......+|...|.+++|+|++++|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 888755443 5688899999999999999999999999999998765 2333467899999999999999999999
Q ss_pred CCCcEEEEcCC------------------CCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Q 016187 211 DDATLRVWNPK------------------SGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVS 272 (394)
Q Consensus 211 ~dg~i~vwd~~------------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~ 272 (394)
.||.|++||++ .++.+..+.. |...+.+++|+|++.++++++.|+.|++||+++++.+.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS---SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC---CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCC---CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 99999999954 4566655543 56789999999999999999999999999999999999
Q ss_pred EeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCC--CC---------------------------------------
Q 016187 273 SLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQH--SL--------------------------------------- 311 (394)
Q Consensus 273 ~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~--~~--------------------------------------- 311 (394)
.+..|..+|.+++|+|++.+++++ .|+.|++|++.. ..
T Consensus 239 ~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (372)
T 1k8k_C 239 TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 317 (372)
T ss_dssp EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence 999999999999999999988888 899999999876 21
Q ss_pred -cceeccCCCCEEEEEEe-CCC---CEEEEEeCCCeEEEEECCCCe
Q 016187 312 -PRSTCDHEDGVTCLMWL-GTS---KYVVTGCVDGKVRVWDSLSGD 352 (394)
Q Consensus 312 -~~~~~~~~~~v~~~~~~-~~~---~~l~sg~~dg~i~iwd~~~~~ 352 (394)
.....+|...|++++|+ +++ .+|++|+.||.|++|++.+++
T Consensus 318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 11123788999999976 666 899999999999999986654
No 60
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-43 Score=327.34 Aligned_cols=287 Identities=16% Similarity=0.204 Sum_probs=242.9
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeec--CcccCEEEEEEcC-CCCEEEEEeCCCcE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--GHKDSVSSLAFSM-DGQLLASGGLDGLV 131 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~--~h~~~V~~v~~s~-~g~~l~t~s~d~~i 131 (394)
.....+.+|.+.|++++|+|++..+||+|+.|+.|++|++.+++....+. +|...|.+++|+| ++++|++++.|+.|
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 34667789999999999999765899999999999999999887776665 7999999999999 78999999999999
Q ss_pred EEEeCCCCceEEEEecC---CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCC-eEE
Q 016187 132 QIWDPSSGNLKCTLEGP---GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK-TIC 207 (394)
Q Consensus 132 ~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~ 207 (394)
++||+.+ +....+..+ ...|.+++|+|++++|++++.|+.|++||+ +++.+..+.+|...|.+++|+|+++ +|+
T Consensus 144 ~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 144 TLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred EEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 9999986 444455443 378999999999999999999999999999 4667788889999999999999999 899
Q ss_pred EEeCCCcEEEEcCCC----CceEEEEcCCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEeccCC----
Q 016187 208 TGSDDATLRVWNPKS----GENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTGKVVSSLVSHT---- 278 (394)
Q Consensus 208 s~~~dg~i~vwd~~~----~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~---- 278 (394)
+++.|+.|++||+++ +..+..+. |...+++++|+| ++.++++++.|+.|++||+++++.+..+..|.
T Consensus 222 s~~~d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 222 TSSVDATVKLWDLRNIKDKNSYIAEMP----HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EEETTSEEEEEEGGGCCSTTCEEEEEE----CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EEeCCCEEEEEeCCCCCcccceEEEec----CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 999999999999987 55555542 567899999999 99999999999999999999887655555432
Q ss_pred -------------CCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-c--CCCCEEEEEEeCCCCEEEEEeCCCe
Q 016187 279 -------------DSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-D--HEDGVTCLMWLGTSKYVVTGCVDGK 342 (394)
Q Consensus 279 -------------~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~--~~~~v~~~~~~~~~~~l~sg~~dg~ 342 (394)
..+..++|+|++.+ +++.|+.|++||+.+....... . |...+.+++|+|++++|++|+ ||.
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN 374 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence 33445677777776 7789999999999876554433 2 456788889999999999997 999
Q ss_pred EEEEECCC
Q 016187 343 VRVWDSLS 350 (394)
Q Consensus 343 i~iwd~~~ 350 (394)
|++||+.+
T Consensus 375 i~iw~~~~ 382 (383)
T 3ei3_B 375 ILIWNRED 382 (383)
T ss_dssp EEEEECC-
T ss_pred EEEEecCC
Confidence 99999864
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-43 Score=330.28 Aligned_cols=300 Identities=18% Similarity=0.268 Sum_probs=254.5
Q ss_pred EEEEcCCCeeeEeecCcccCEEEEEEcCCCC-EEEEEeCCCcEEEEeC----CCCc------eEEEEec----------C
Q 016187 90 FFWRINQGDWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDP----SSGN------LKCTLEG----------P 148 (394)
Q Consensus 90 ~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~-~l~t~s~d~~i~vwd~----~~~~------~~~~~~~----------~ 148 (394)
.+|+.+..........|.++|++++|+|+|+ +||+|+.|+.|++|++ .+++ ....+.. |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (425)
T 1r5m_A 28 SSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKT 107 (425)
T ss_dssp ------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------
T ss_pred ccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCC
Confidence 3677655444444455779999999999999 9999999999999999 8887 4555544 5
Q ss_pred CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEE
Q 016187 149 GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHV 228 (394)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 228 (394)
.+.|.+++|+|++++|++++.|+.|++|+ .+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 66999999999999999999999999999 56677788889999999999999999999999999999999999988777
Q ss_pred EcCCCCcc------------cCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEE
Q 016187 229 IRGHPYHT------------EGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATG 296 (394)
Q Consensus 229 ~~~~~~~~------------~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~ 296 (394)
+..+.... ..+.++.++|++ .+++++.++.|++||+.+++.+..+..|...|.+++|+|++.+|+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 66432110 017788888875 57889999999999999999888899999999999999999999999
Q ss_pred eCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCE
Q 016187 297 SMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDF 375 (394)
Q Consensus 297 s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 375 (394)
+.|+.|++||+....... ...|...+.+++|+|++ ++++++.||.|++||+.+++++..+..|...|.+++|+|++++
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQK 344 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSE
T ss_pred cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCE
Confidence 999999999998765444 34588899999999999 9999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEeccC
Q 016187 376 LVSVSLDGTARVFEIAD 392 (394)
Q Consensus 376 l~s~s~dg~i~iw~~~~ 392 (394)
|++++.||.|++|++..
T Consensus 345 l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp EEEEETTSCEEEEECHH
T ss_pred EEEEECCCeEEEEECCC
Confidence 99999999999999863
No 62
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-45 Score=337.77 Aligned_cols=323 Identities=11% Similarity=0.118 Sum_probs=238.1
Q ss_pred eeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC--eeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 016187 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~--~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd 135 (394)
..+..|.++|++++|+|+ +.+||+|+.|+.+++|++.++ +....+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 5 ~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNSQ-RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp EEEEECSSCCSCCEECSS-SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred eeEecCCCcEEEEEECCC-CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 445667889999999995 678999999999999999988 77788999999999999999999999999999999999
Q ss_pred CCCCc---eEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc---eeeeecc-cCcCeEEEEECCCCCeEEE
Q 016187 136 PSSGN---LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA---YLNMFSG-HGSSVTCGDFTPDGKTICT 208 (394)
Q Consensus 136 ~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~---~~~~~~~-h~~~v~~~~~~~~~~~l~s 208 (394)
+.+++ ....+..|...|.+++|+|++++|++++.|+.|++|++..++ ....+.+ |...|.+++|+|++++|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 99887 566777899999999999999999999999999999998876 3666777 9999999999999999999
Q ss_pred EeCCCcEEEEcCCCCc---------------eEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE---
Q 016187 209 GSDDATLRVWNPKSGE---------------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV--- 270 (394)
Q Consensus 209 ~~~dg~i~vwd~~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~--- 270 (394)
++.|++|++||+.... .-..+... .|...+++++|+|+++++++++.|++|++||+.+++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 9999999999985321 11112222 4677899999999999999999999999999999876
Q ss_pred -EEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCC--cceeccCC----------------CCEEEEEEeCCC
Q 016187 271 -VSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSL--PRSTCDHE----------------DGVTCLMWLGTS 331 (394)
Q Consensus 271 -~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~--~~~~~~~~----------------~~v~~~~~~~~~ 331 (394)
+..+..|..+|.+++|+|++.+|++++.++.+ +|+..... ........ ....++.|++..
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALR 321 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccc
Confidence 77888999999999999999999999866665 66654221 01111100 112223232222
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCC-C---EEEEEeCCCcEEEEec
Q 016187 332 KYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQ-D---FLVSVSLDGTARVFEI 390 (394)
Q Consensus 332 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~---~l~s~s~dg~i~iw~~ 390 (394)
..+......|... ........|.+.|+++++.+.. . .|+|||.||.|++|++
T Consensus 322 ~~~~~~~~~g~~~-------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 322 STFRNMDLKGSSQ-------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccchhhccccc-------cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 2221111111111 1112235799999999976543 3 6999999999999986
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.8e-44 Score=327.99 Aligned_cols=291 Identities=21% Similarity=0.358 Sum_probs=249.2
Q ss_pred eeeeccCCcEEEEEEcCC---CCcEEEEecCCCeEEEEEcCCCeeeEeecC-----cccCEEEEEEcCC----CCEEEEE
Q 016187 58 HIFSGHSDEVYSVACSPT---DATLVATGGGDDKGFFWRINQGDWASEIQG-----HKDSVSSLAFSMD----GQLLASG 125 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~---~~~~lasg~~d~~v~~w~~~~~~~~~~~~~-----h~~~V~~v~~s~~----g~~l~t~ 125 (394)
....+|.++|++++|+|. +..++++++.++.+++|++.+++.+..+.. |...|++++|+|+ |++|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345589999999999984 334444555667999999998877766654 5578999999999 6799999
Q ss_pred eCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcC-CCCEEEEecCCCeEEEEeCCccceeeee---cccCcCeEEEEECC
Q 016187 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCGDFTP 201 (394)
Q Consensus 126 s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d~~i~iw~~~~~~~~~~~---~~h~~~v~~~~~~~ 201 (394)
+.|+.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.|+.|++||+.+++.+..+ .+|...|.+++|+|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999999999999999999999999999999999 8999999999999999999998888777 78999999999999
Q ss_pred CCCeEEEEeCCCcEEEEcCCCCceEEEEcC-------------------------CCCcccCeEEEEEcCCCCEEEEEeC
Q 016187 202 DGKTICTGSDDATLRVWNPKSGENIHVIRG-------------------------HPYHTEGLTCLTISADSTLALSGSK 256 (394)
Q Consensus 202 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------------------------~~~~~~~i~~~~~~~~~~~l~~g~~ 256 (394)
++++|++++.||.|++||+++++....+.. ...|...|.++.++ +.++++++.
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 249 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC 249 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec
Confidence 999999999999999999987653322110 11266789999998 779999999
Q ss_pred CCcEEEEECCCCc--------------EEEEeccCCCCEEEEEECCC--CCeEEEEeCCCcEEEEeCCCCCcc-----ee
Q 016187 257 DGSVHMVNITTGK--------------VVSSLVSHTDSIECIGFSRS--SPWAATGSMDQKLIIWDLQHSLPR-----ST 315 (394)
Q Consensus 257 dg~i~i~d~~~~~--------------~~~~~~~h~~~i~~v~~~~~--~~~l~s~s~dg~i~iwd~~~~~~~-----~~ 315 (394)
|+.|++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||+...... ..
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 329 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL 329 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence 9999999998764 37788889999999999999 999999999999999999876432 23
Q ss_pred ccC--CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Q 016187 316 CDH--EDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS 350 (394)
Q Consensus 316 ~~~--~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~ 350 (394)
..| ...|++++|+|++++|++|+.||.|++||+.+
T Consensus 330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 345 68899999999999999999999999999753
No 64
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-42 Score=311.21 Aligned_cols=283 Identities=20% Similarity=0.291 Sum_probs=253.2
Q ss_pred CeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEE
Q 016187 97 GDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMW 176 (394)
Q Consensus 97 ~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw 176 (394)
.+....+.+|.+.|++++| |++++|++|+.|+.|++||+.+++....+..|...|.+++|+|+++++++++.|+.+++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 4677889999999999999 999999999999999999999999888889999999999999999999999999999999
Q ss_pred eCCcc---ceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC-CCCEEE
Q 016187 177 NADRA---AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLAL 252 (394)
Q Consensus 177 ~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~ 252 (394)
++... +.+..+.+|...|.+++| ++++|++++.||.|++|| .++....+.. |...+.++.+.| ++.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA---HNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC---CSSCEEEEEEEETTTTEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc---CCCceeEEEEccCCCCEEE
Confidence 98653 556778899999999999 678999999999999999 5555666554 567899999888 899999
Q ss_pred EEeCCCcEEEEECCCCcEEEEecc-CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCC
Q 016187 253 SGSKDGSVHMVNITTGKVVSSLVS-HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGT 330 (394)
Q Consensus 253 ~g~~dg~i~i~d~~~~~~~~~~~~-h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~ 330 (394)
+++.|+.|++|| ..+.+..+.. |...+.+++|+|++. +++++.|+.|++||++...... ...|...|++++|+|+
T Consensus 160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp EEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred EEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 999999999999 5566677776 899999999999998 9999999999999998765544 3468899999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 331 SKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 331 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
+ +|++|+.||.|++||+.+++++..+..|...|.+++|+|+++ +++++.||.|++|++..
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 9 689999999999999999999999999999999999999998 56799999999999875
No 65
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.8e-44 Score=329.55 Aligned_cols=288 Identities=16% Similarity=0.255 Sum_probs=249.6
Q ss_pred eecCcccCEEEEEEcCC----CCEEEEEeCCCcEEEEeCCCCceEEEEec-----CCCCEEEEEEcCC----CCEEEEec
Q 016187 102 EIQGHKDSVSSLAFSMD----GQLLASGGLDGLVQIWDPSSGNLKCTLEG-----PGGGVEWVSWHPR----GHIVLAGS 168 (394)
Q Consensus 102 ~~~~h~~~V~~v~~s~~----g~~l~t~s~d~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~s 168 (394)
...+|..+|++++|+|+ ...+++++.++.|++||+.+++.+..+.. +...|.+++|+|+ +.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 44689999999999984 45666677777999999998877665543 5578999999999 66999999
Q ss_pred CCCeEEEEeCCccceeeeecccCcCeEEEEECC-CCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCC
Q 016187 169 EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD 247 (394)
Q Consensus 169 ~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (394)
.|+.|++|++.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++.+..+.....|...+.+++|+|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 999999999999999999999999999999999 9999999999999999999999888887544457788999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEe----------------------------ccCCCCEEEEEECCCCCeEEEEeCC
Q 016187 248 STLALSGSKDGSVHMVNITTGKVVSSL----------------------------VSHTDSIECIGFSRSSPWAATGSMD 299 (394)
Q Consensus 248 ~~~l~~g~~dg~i~i~d~~~~~~~~~~----------------------------~~h~~~i~~v~~~~~~~~l~s~s~d 299 (394)
+.++++++.||.|++||+++++.+..+ ..|...|.+++|+ +.++++++.|
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d 250 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE 250 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC
Confidence 999999999999999999887544333 3399999999999 6799999999
Q ss_pred CcEEEEeCCCCCc---------------ceeccCCCCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCe----EEEEee
Q 016187 300 QKLIIWDLQHSLP---------------RSTCDHEDGVTCLMWLGT--SKYVVTGCVDGKVRVWDSLSGD----CVRTFS 358 (394)
Q Consensus 300 g~i~iwd~~~~~~---------------~~~~~~~~~v~~~~~~~~--~~~l~sg~~dg~i~iwd~~~~~----~~~~~~ 358 (394)
+.|++||+..... .....|...|++++|+|+ +++|++|+.||.|++||+.+++ ....+.
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 330 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT 330 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc
Confidence 9999999875432 123357778999999999 9999999999999999999876 444788
Q ss_pred cc--cCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 359 GH--RDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 359 ~h--~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
+| ...|++++|+|++++|++++.||.|++|++.
T Consensus 331 ~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 331 HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 87 7999999999999999999999999999985
No 66
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-43 Score=325.46 Aligned_cols=287 Identities=17% Similarity=0.244 Sum_probs=250.0
Q ss_pred ecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCc
Q 016187 103 IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR 180 (394)
Q Consensus 103 ~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~ 180 (394)
+..|.++|++++|+|+|++|++++.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++|++.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45599999999999999999999999999999999887 7788889999999999999999999999999999999987
Q ss_pred cceee--eecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceE---EEEcCCCCcccCeEEEEEcCCCCEEEEEe
Q 016187 181 AAYLN--MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENI---HVIRGHPYHTEGLTCLTISADSTLALSGS 255 (394)
Q Consensus 181 ~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~g~ 255 (394)
++... .+..|...|.+++|+|++++|++++.|+.|++||+..++.. ..+. ..|...+++++|+|++.++++++
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK--KPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC--TTCCSCEEEEEECTTSSEEEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeee--cccCCCeeEEEEcCCCCEEEEEc
Confidence 75433 34678999999999999999999999999999999887642 2222 23567899999999999999999
Q ss_pred CCCcEEEEEC------------------CCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcc-eec
Q 016187 256 KDGSVHMVNI------------------TTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPR-STC 316 (394)
Q Consensus 256 ~dg~i~i~d~------------------~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~ 316 (394)
.|+.|++||+ ..++.+..+..|...|.+++|+|++.+|++++.|+.|++||++..... ...
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 9999999995 467888899999999999999999999999999999999999766443 334
Q ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC--CeE--------------------------------E------EE
Q 016187 317 DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS--GDC--------------------------------V------RT 356 (394)
Q Consensus 317 ~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~--~~~--------------------------------~------~~ 356 (394)
.|...+.+++|+|++.+|++| .|+.|++|++.+ ++. . ..
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 320 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccc
Confidence 677899999999999988888 899999999877 421 0 22
Q ss_pred e-ecccCceeEEEEc-cCC---CEEEEEeCCCcEEEEeccC
Q 016187 357 F-SGHRDAIQAISVS-AHQ---DFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 357 ~-~~h~~~v~~l~~~-~~~---~~l~s~s~dg~i~iw~~~~ 392 (394)
+ .+|..+|++++|. +++ ++|+||+.||.|++|++.+
T Consensus 321 ~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 321 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred ccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 3 4899999999866 666 9999999999999999864
No 67
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=323.82 Aligned_cols=336 Identities=14% Similarity=0.231 Sum_probs=246.3
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEee-------------cCcccCEEEEEEcC-CCC
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI-------------QGHKDSVSSLAFSM-DGQ 120 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~-------------~~h~~~V~~v~~s~-~g~ 120 (394)
.....+.+|.+.|++++|+|.++.+||+|+.|+.+++|++.+++....+ .+|...|.+++|+| ++.
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 4567788999999999999955678999999999999999887655444 36999999999999 778
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCC---CEEEEecCCCeEEEEeCCccceeeeecccCcCeEEE
Q 016187 121 LLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRG---HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCG 197 (394)
Q Consensus 121 ~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~ 197 (394)
+|++++.|+.|++||+.+++....+. +...+..+.|+|.+ .++++++.++.|++|++.+++.+..+.+|...|.++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAV 192 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEE
Confidence 99999999999999999998877766 66789999999854 499999999999999999998889999999999999
Q ss_pred EECCCCC-eEEEEeCCCcEEEEcCCCCc-eEEEEcCC------------CCcccCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 198 DFTPDGK-TICTGSDDATLRVWNPKSGE-NIHVIRGH------------PYHTEGLTCLTISADSTLALSGSKDGSVHMV 263 (394)
Q Consensus 198 ~~~~~~~-~l~s~~~dg~i~vwd~~~~~-~~~~~~~~------------~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~ 263 (394)
+|+|+++ +|++++.||.|++||++++. .+..+..+ ..|...+++++|+|++.++++++.|+.|++|
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9999998 48999999999999998765 33333211 2466789999999999999999999999999
Q ss_pred ECCCCcEEEEeccC-----CCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCccee-ccCCCCEEEEEEeCCCCEEEEE
Q 016187 264 NITTGKVVSSLVSH-----TDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRST-CDHEDGVTCLMWLGTSKYVVTG 337 (394)
Q Consensus 264 d~~~~~~~~~~~~h-----~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg 337 (394)
|+.+++....+..+ ...+...........++.++.++.|++||+.+...... ..|...|++++|+|++++|++|
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 99988765443322 12222223334455677778899999999987655443 4688999999999999999999
Q ss_pred eCCCeEEEEECCCCeEEEEeecccCceeEEEEcc-CCCEEEEEeCCCcEEEEeccCCC
Q 016187 338 CVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSA-HQDFLVSVSLDGTARVFEIADFK 394 (394)
Q Consensus 338 ~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iw~~~~~~ 394 (394)
+.||.|++|++.+++.+.....+... ..+.+ ....+.+.+.|+.+++|+...|+
T Consensus 353 ~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 407 (408)
T 4a11_B 353 SRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFEDAWSSSDEEGGTSAWSHPQFE 407 (408)
T ss_dssp ETTSCEEEEEECC---------------------------------------------
T ss_pred CCCCeEEEEeCCCCCccCCCCceEec---cccccccceeecccCccCceeecCCcccC
Confidence 99999999999999887765543322 22333 34456678889999999988774
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-44 Score=333.83 Aligned_cols=286 Identities=16% Similarity=0.320 Sum_probs=252.2
Q ss_pred ccCEEEEEEcCCCC-EEEEE----------eCCCcEEEEeCCCCc---eEEEEecCCCCEEEEEEcCCCCEEEEecCCCe
Q 016187 107 KDSVSSLAFSMDGQ-LLASG----------GLDGLVQIWDPSSGN---LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDST 172 (394)
Q Consensus 107 ~~~V~~v~~s~~g~-~l~t~----------s~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~ 172 (394)
...|.+++|+|+|+ +|++| +.|+.|++||+.+++ .... ..+...|.+++|+|++.+|++++.|+.
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCCceEEEEECCCCCeEEEEccCCe
Confidence 34688999999997 99999 899999999998875 2323 347789999999999999999999999
Q ss_pred EEEEeCCc----cceeeeecccCcCeEEEEECCC-CCeEEEEeCCCcEEEEcCCCCc------eEEEEcCCCCcccCeEE
Q 016187 173 VWMWNADR----AAYLNMFSGHGSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGE------NIHVIRGHPYHTEGLTC 241 (394)
Q Consensus 173 i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~i~~ 241 (394)
|++|++.. .+.+..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++ ....+.....|...+.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999987 4577888899999999999998 8999999999999999998876 33333223346778999
Q ss_pred EEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEeccC------CCCEEEEEECCCC-CeEEEEeCCC---cEEEEeCCCC
Q 016187 242 LTISAD-STLALSGSKDGSVHMVNITTGKVVSSLVSH------TDSIECIGFSRSS-PWAATGSMDQ---KLIIWDLQHS 310 (394)
Q Consensus 242 ~~~~~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h------~~~i~~v~~~~~~-~~l~s~s~dg---~i~iwd~~~~ 310 (394)
++|+|+ +.++++++.|+.|++||+++++.+..+..| ...|.+++|+|++ .++++++.|+ .|++||++..
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 999999 789999999999999999999999888776 7899999999997 6899999999 9999999874
Q ss_pred -Ccce-ec-cCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCC-CEEEEEeCCCcE
Q 016187 311 -LPRS-TC-DHEDGVTCLMWLG-TSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQ-DFLVSVSLDGTA 385 (394)
Q Consensus 311 -~~~~-~~-~~~~~v~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~~l~s~s~dg~i 385 (394)
.+.. .. .|...|.+++|+| ++++|++++.||.|++||+.+++++..+.+|...|++++|+|++ .+|++++.||.|
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 251 NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcE
Confidence 3333 33 6889999999999 89999999999999999999999999999999999999999998 899999999999
Q ss_pred EEEeccCC
Q 016187 386 RVFEIADF 393 (394)
Q Consensus 386 ~iw~~~~~ 393 (394)
++|++...
T Consensus 331 ~iw~~~~~ 338 (416)
T 2pm9_A 331 EVQTLQNL 338 (416)
T ss_dssp EEEESCCC
T ss_pred EEEEccCC
Confidence 99998764
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-42 Score=309.41 Aligned_cols=291 Identities=20% Similarity=0.312 Sum_probs=254.9
Q ss_pred CCceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEE
Q 016187 54 DDSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQI 133 (394)
Q Consensus 54 ~~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~v 133 (394)
......+.+|.+.|++++| |+ +.+|++|+.|+.+++|++.+++....+..|...|.+++|+|++++|++++.|+.|++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~-~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VD-DSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EE-TTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cC-CCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 3557788999999999999 74 567899999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCC---ceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECC-CCCeEEEE
Q 016187 134 WDPSSG---NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP-DGKTICTG 209 (394)
Q Consensus 134 wd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~ 209 (394)
|++... +....+..|...|.+++| ++.++++++.|+.+++|+ ..+....+..|...+.++.|.| ++++++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 998654 456678889999999999 577999999999999999 5566777888999999999988 89999999
Q ss_pred eCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCC
Q 016187 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (394)
Q Consensus 210 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~ 289 (394)
+.||.|++||. ++....+.. .+...+.+++++|++. +++++.|+.|++||+++++.+..+..|...|.+++|+|+
T Consensus 162 ~~d~~i~i~d~--~~~~~~~~~--~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 162 SADKTIKLWQN--DKVIKTFSG--IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp ETTSCEEEEET--TEEEEEECS--SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred ECCCCEEEEec--CceEEEEec--cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 99999999993 445555543 2567899999999998 899999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q 016187 290 SPWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTF 357 (394)
Q Consensus 290 ~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 357 (394)
+ .+++++.||.|++||+.+..... ...|...|.+++|+|+++ +++++.||.|++|++.+++.+...
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 9 68999999999999998765443 346777899999999998 567999999999999888766543
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=8.1e-42 Score=345.89 Aligned_cols=325 Identities=18% Similarity=0.255 Sum_probs=278.4
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....+.+|.+.|.+++|+|+ +.+||+|+.|+.+++|++.+++.+..+.+|.+.|++++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 124 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLW 124 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred ceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEE
Confidence 356678899999999999995 6789999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCC-ceEEEEecCCCCEEEEEEcC-CCCEEEEecCCCeEEEEeCCccceeeeecccC-cCeEEEEECC--CCCeEEEE
Q 016187 135 DPSSG-NLKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-SSVTCGDFTP--DGKTICTG 209 (394)
Q Consensus 135 d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~--~~~~l~s~ 209 (394)
|+.++ .....+.+|...|.+++|+| ++..+++++.|+.|++|++.++.....+..+. ..+.+++|+| ++++|+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp EGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEE
T ss_pred ECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEE
Confidence 99887 66677888999999999999 78899999999999999998877666665554 8899999999 99999999
Q ss_pred eCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCC
Q 016187 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (394)
Q Consensus 210 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~ 289 (394)
+.||.|++||+.+++.+..+.+ |...+++++|+|++.++++++.||.|++||+.+++.+..+..|...+.+++|+|+
T Consensus 205 ~~dg~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 281 (814)
T 3mkq_A 205 SDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPT 281 (814)
T ss_dssp CTTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTT
T ss_pred eCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccC
Confidence 9999999999999988877765 4668999999999999999999999999999999999999999999999999999
Q ss_pred CCe-EEEEeCCCcEEEEeCCCCCcce--------------------------------------------eccCCCCEEE
Q 016187 290 SPW-AATGSMDQKLIIWDLQHSLPRS--------------------------------------------TCDHEDGVTC 324 (394)
Q Consensus 290 ~~~-l~s~s~dg~i~iwd~~~~~~~~--------------------------------------------~~~~~~~v~~ 324 (394)
+.. +++++.++.+.+|++....... ...+...+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (814)
T 3mkq_A 282 GRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQS 361 (814)
T ss_dssp CGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSE
T ss_pred CCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCce
Confidence 873 2444456778888865321100 0113345789
Q ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEe
Q 016187 325 LMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFE 389 (394)
Q Consensus 325 ~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~ 389 (394)
++|+|++++|++++ +|.+.+|++...... +.+.|.+++|+|+++++++++.+|.|++|+
T Consensus 362 ~~~spdg~~la~~~-~~~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~v~l~~ 420 (814)
T 3mkq_A 362 LAHSPNGRFVTVVG-DGEYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQIKYYK 420 (814)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCCEEEEE
T ss_pred eEECCCCCEEEEec-CCEEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCcEEEEE
Confidence 99999999999998 999999997655432 245677888888888888888888888885
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.8e-43 Score=324.29 Aligned_cols=305 Identities=17% Similarity=0.286 Sum_probs=257.2
Q ss_pred CCCeEEEEEcCCCeeeEeecCcccCEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceEEEEe-------------cCCC
Q 016187 85 GDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDPSSGNLKCTLE-------------GPGG 150 (394)
Q Consensus 85 ~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~-~g~~l~t~s~d~~i~vwd~~~~~~~~~~~-------------~~~~ 150 (394)
.+..+++|++...+....+.+|.+.|++++|+| ++++|++|+.|+.|++||+.+++....+. +|..
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY 100 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence 345677888888888888999999999999999 99999999999999999999876543332 4888
Q ss_pred CEEEEEEcC-CCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCC---CCeEEEEeCCCcEEEEcCCCCceE
Q 016187 151 GVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENI 226 (394)
Q Consensus 151 ~v~~~~~~~-~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~ 226 (394)
.|.+++|+| ++.++++++.|+.|++|++.+++....+. +...+.++.|+|. +.++++++.|+.|++||+++++.+
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 999999999 77799999999999999999988777665 7778899999984 459999999999999999998888
Q ss_pred EEEcCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCc-EEEEe---------------ccCCCCEEEEEECCC
Q 016187 227 HVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGK-VVSSL---------------VSHTDSIECIGFSRS 289 (394)
Q Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~dg~i~i~d~~~~~-~~~~~---------------~~h~~~i~~v~~~~~ 289 (394)
..+.. |...+++++++|++. ++++|+.||.|++||++++. .+..+ ..|...|.+++|+|+
T Consensus 180 ~~~~~---~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 256 (408)
T 4a11_B 180 HILQG---HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSD 256 (408)
T ss_dssp EEECC---CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTT
T ss_pred eeecC---CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCC
Confidence 77765 567899999999998 58899999999999998765 33333 468899999999999
Q ss_pred CCeEEEEeCCCcEEEEeCCCCCcceec------cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCc
Q 016187 290 SPWAATGSMDQKLIIWDLQHSLPRSTC------DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDA 363 (394)
Q Consensus 290 ~~~l~s~s~dg~i~iwd~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~ 363 (394)
+.+|++++.|+.|++||+......... .....+...........+++++.++.|++||+.+++++..+.+|.+.
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 336 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT 336 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe
Confidence 999999999999999999765432211 11112222233344567778888999999999999999999999999
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 364 IQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 364 v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
|++++|+|++++|++++.||.|++|++...
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 999999999999999999999999998765
No 72
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.6e-42 Score=318.01 Aligned_cols=286 Identities=19% Similarity=0.349 Sum_probs=250.2
Q ss_pred EeecCcccCE--EEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCCCEEEEEEcCCCCEEEEecCCCeEEEEe
Q 016187 101 SEIQGHKDSV--SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (394)
Q Consensus 101 ~~~~~h~~~V--~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~ 177 (394)
....+|.+.+ .+++|++ ..+++++.|+.|++||+.+++....+.. +...|.+++|+|++++|++|+.|+.|++|+
T Consensus 85 ~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp EECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 3445776654 4456654 5688899999999999999998877765 678999999999999999999999999999
Q ss_pred CCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCC-CceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC
Q 016187 178 ADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADSTLALSGSK 256 (394)
Q Consensus 178 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~ 256 (394)
+.+++.+..+.+|...|.+++| ++++|++|+.||.|++||++. +..+..+.. |...+.++.|+|++.++++|+.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQG---HSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEET
T ss_pred CcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcC---CCCCeeEEEEcCCCCEEEEEeC
Confidence 9999999999999999999999 567999999999999999984 445555554 5678999999999999999999
Q ss_pred CCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCC-eEEEEe--CCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCE
Q 016187 257 DGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSP-WAATGS--MDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKY 333 (394)
Q Consensus 257 dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~-~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~ 333 (394)
|+.|++||+++++.+..+..|...|.+++|+|++. ++++++ .|+.|++||+.+........+...+.+++|+|++++
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~ 317 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKE 317 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSE
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCe
Confidence 99999999999999999999999999999999765 566655 799999999998877777778889999999999999
Q ss_pred EEEE--eCCCeEEEEECCCCeEEE--EeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 334 VVTG--CVDGKVRVWDSLSGDCVR--TFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 334 l~sg--~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
++++ +.||.|++|++.+++... .+.+|...|.+++|+|++++|++++.||.|++|++.+.
T Consensus 318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred EEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 9994 489999999999876654 46799999999999999999999999999999998753
No 73
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.3e-43 Score=320.90 Aligned_cols=278 Identities=15% Similarity=0.178 Sum_probs=223.2
Q ss_pred ccCEEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCce----------EEEEecCCCCEEEEEEcCCCCEEEEe--
Q 016187 107 KDSVSSLAFSMDGQLLASGGLDG-------LVQIWDPSSGNL----------KCTLEGPGGGVEWVSWHPRGHIVLAG-- 167 (394)
Q Consensus 107 ~~~V~~v~~s~~g~~l~t~s~d~-------~i~vwd~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~-- 167 (394)
.-||++++|+|||++|++|+.+. .|++|++..+.. ...+..+...+.++++. +..+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 35899999999999999998654 599999875532 12345677777777654 4555554
Q ss_pred ---------cCCCeEEEEeCCccce----eee-----ecccCcCeEEEEECCCCCeEEE--EeCCCcEEEEcCCCCceEE
Q 016187 168 ---------SEDSTVWMWNADRAAY----LNM-----FSGHGSSVTCGDFTPDGKTICT--GSDDATLRVWNPKSGENIH 227 (394)
Q Consensus 168 ---------s~d~~i~iw~~~~~~~----~~~-----~~~h~~~v~~~~~~~~~~~l~s--~~~dg~i~vwd~~~~~~~~ 227 (394)
+.|+.+++|++..... ... ...+...+.+++|+|||+++++ ++.|++|+|||+.+++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 4578899998754321 111 1234456889999999999764 4578999999999999887
Q ss_pred EEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE--eccCCCCEEEEEECCCCCeEEEEeCCC----c
Q 016187 228 VIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS--LVSHTDSIECIGFSRSSPWAATGSMDQ----K 301 (394)
Q Consensus 228 ~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~--~~~h~~~i~~v~~~~~~~~l~s~s~dg----~ 301 (394)
.+. |...|.+++|+|+++++++++.+ .+.+|+..+++.+.. ...|...|.+++|+|++.++++++.|+ .
T Consensus 172 ~~~----~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 172 EIE----TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIV 246 (365)
T ss_dssp EEE----CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEE
T ss_pred EeC----CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeE
Confidence 775 45579999999999999998854 566777777765543 456888999999999999999999887 6
Q ss_pred EEEEeCCCCCc-----ceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ecccCceeEEEEccCCCE
Q 016187 302 LIIWDLQHSLP-----RSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTF-SGHRDAIQAISVSAHQDF 375 (394)
Q Consensus 302 i~iwd~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~~~~~~~ 375 (394)
+++|++..... .....|...|++++|+|++++||+|+.|++|+|||+.++++++.+ .+|..+|++|+|+||+++
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~ 326 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTY 326 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCE
T ss_pred EeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCE
Confidence 88898765432 234568889999999999999999999999999999999999885 799999999999999999
Q ss_pred EEEEeCCCcEEEEecc
Q 016187 376 LVSVSLDGTARVFEIA 391 (394)
Q Consensus 376 l~s~s~dg~i~iw~~~ 391 (394)
|||||.|++||||+++
T Consensus 327 laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 327 VASVSAANTIHIIKLP 342 (365)
T ss_dssp EEEEETTSEEEEEECC
T ss_pred EEEEeCCCeEEEEEcC
Confidence 9999999999999986
No 74
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3e-41 Score=316.31 Aligned_cols=277 Identities=20% Similarity=0.399 Sum_probs=242.8
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEe--cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeee
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM 186 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~ 186 (394)
.++.|+||++ ++||+|. |++|+|||..+|+....+. +|...|++++|+|++++|++|+.|+.|++|++.+++.+..
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE
Confidence 3678999985 5777765 9999999999999876654 5677899999999999999999999999999999999999
Q ss_pred ecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCce-EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 016187 187 FSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN-IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (394)
Q Consensus 187 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~ 265 (394)
+.+|...+.++++ ++..|++|+.|+.+++||...... +..+.+ |...+..+.++|++.++++++.|+.+++|+.
T Consensus 185 ~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~---h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 185 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSG---HSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 259 (420)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecc---cccceeeeeecCCCCeeeeeeccccceEEee
Confidence 9999999988776 467999999999999999886543 344444 5678999999999999999999999999999
Q ss_pred CCCc----EEEEeccCCCCEEEEEECCCCC-eEEE--EeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEe
Q 016187 266 TTGK----VVSSLVSHTDSIECIGFSRSSP-WAAT--GSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGC 338 (394)
Q Consensus 266 ~~~~----~~~~~~~h~~~i~~v~~~~~~~-~l~s--~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 338 (394)
.+++ .+.....|...|.+++|+|.+. ++++ |+.|++|++||+.+........+...+.++.|+++++.+++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEE
Confidence 8764 3456778999999999999765 4444 4579999999999887776667778899999999999988765
Q ss_pred --CCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 339 --VDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 339 --~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
.||.|+|||+.+++++.++.+|.+.|++|+|+|++++|+|||.|++|++|++.+
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 799999999999999999999999999999999999999999999999999864
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=301.60 Aligned_cols=277 Identities=19% Similarity=0.398 Sum_probs=241.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEe--cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee
Q 016187 110 VSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (394)
Q Consensus 110 V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~ 187 (394)
+++|+||+++ +||+| .|++|+|||+.+++.+..+. +|...|.+++|+|++++|++|+.|++|++|++++++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5679999986 77765 59999999999999887665 56778999999999999999999999999999999999999
Q ss_pred cccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCce-EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 016187 188 SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN-IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (394)
Q Consensus 188 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~ 266 (394)
.+|...+.++. +++..+++++.++.+++|+...... +..+.+ |...+.++.+.+++.++++++.|++|++||++
T Consensus 106 ~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 106 TSHSARVGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATLSG---HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp ECCSSCEEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred cCccceEEEee--cCCCEEEEEecCCceEeeecCCCceeEEEEcC---ccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 99999887655 4567999999999999999877644 334443 56779999999999999999999999999998
Q ss_pred CCc----EEEEeccCCCCEEEEEECCCCCe---EEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEe-
Q 016187 267 TGK----VVSSLVSHTDSIECIGFSRSSPW---AATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGC- 338 (394)
Q Consensus 267 ~~~----~~~~~~~h~~~i~~v~~~~~~~~---l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~- 338 (394)
+++ .......|...|.++.++|.+.. +++++.+++|++||...........+...+..+.|++.++.+++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEE
Confidence 765 23455668889999999998764 3467789999999998887777777888899999999999888765
Q ss_pred -CCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 339 -VDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 339 -~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
.|+.|++||+.+++++.++.+|.+.|++|+|+|++++|+|||.||+|+||++.+.
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 7999999999999999999999999999999999999999999999999999765
No 76
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-41 Score=302.94 Aligned_cols=247 Identities=20% Similarity=0.302 Sum_probs=213.9
Q ss_pred eeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCC--CeeeEeecCcccCEEEEEEcCC--CCEEEEEeCCCcEEE
Q 016187 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ--GDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGLVQI 133 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~--~~~~~~~~~h~~~V~~v~~s~~--g~~l~t~s~d~~i~v 133 (394)
.++.+|.+.|++++|+|+ +.+||||+.|++|++|++.. .+.+.++.+|.++|++++|+|+ |++|++|+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~-g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYY-GKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTT-SSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCC-CCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 467899999999999995 67899999999999999974 4677899999999999999874 899999999999999
Q ss_pred EeCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEEEeCCccc--eeeeecccCcCeEEEEECCC-----
Q 016187 134 WDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTPD----- 202 (394)
Q Consensus 134 wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~----- 202 (394)
||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++|++.... ....+.+|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 9998874 45677889999999999997 7899999999999999997653 23567789999999999997
Q ss_pred --------CCeEEEEeCCCcEEEEcCCCCc----eEEEEcCCCCcccCeEEEEEcCCC---CEEEEEeCCCcEEEEECCC
Q 016187 203 --------GKTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISADS---TLALSGSKDGSVHMVNITT 267 (394)
Q Consensus 203 --------~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~g~~dg~i~i~d~~~ 267 (394)
+++|++|+.|++|++||+++++ ....+.+ |...|.+++|+|++ .++++++.|++|++||+.+
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~---H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG---HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECC---CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecC---CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 5799999999999999998765 3344444 67789999999984 8999999999999999976
Q ss_pred Cc---EEEEe--ccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCC
Q 016187 268 GK---VVSSL--VSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQ 308 (394)
Q Consensus 268 ~~---~~~~~--~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~ 308 (394)
.. ....+ ..|...|.+++|+|++++||+++.|++|+||+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 43 22233 4678899999999999999999999999999975
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-41 Score=316.11 Aligned_cols=298 Identities=20% Similarity=0.333 Sum_probs=250.3
Q ss_pred CCCCceeeee--ccCCcE--EEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecC-cccCEEEEEEcCCCCEEEEEe
Q 016187 52 QPDDSTHIFS--GHSDEV--YSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAFSMDGQLLASGG 126 (394)
Q Consensus 52 ~~~~~~~~~~--~h~~~v--~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~-h~~~V~~v~~s~~g~~l~t~s 126 (394)
.|..+..++. +|.+.+ .+++|++ .. +++++.|+.|++|++.+++....+.. |...|++++|+|+|++|++|+
T Consensus 77 ~~~~p~~~~~~~~~~~~~~~~~~~~s~--~~-l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~ 153 (401)
T 4aez_A 77 FNTTPERVLDAPGIIDDYYLNLLDWSN--LN-VVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL 153 (401)
T ss_dssp CCCSCSEEEECTTCCCCTTCBCEEECT--TS-EEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCCCcceeeeCCCCcCCceEEEEeecC--CC-EEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC
Confidence 3444555554 777765 4456654 33 55678999999999999988877765 899999999999999999999
Q ss_pred CCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCC-ccceeeeecccCcCeEEEEECCCCCe
Q 016187 127 LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAYLNMFSGHGSSVTCGDFTPDGKT 205 (394)
Q Consensus 127 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~ 205 (394)
.||.|++||+.+++.+..+.+|...|.+++|+ ++++++++.|+.|++||+. .......+.+|...|.+++|+|++++
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 231 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ 231 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE
Confidence 99999999999999999999999999999994 5799999999999999998 45667788899999999999999999
Q ss_pred EEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCC-EEEEEe--CCCcEEEEECCCCcEEEEeccCCCCEE
Q 016187 206 ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGS--KDGSVHMVNITTGKVVSSLVSHTDSIE 282 (394)
Q Consensus 206 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~--~dg~i~i~d~~~~~~~~~~~~h~~~i~ 282 (394)
|++|+.|+.|++||+++++.+..+.. |...+.+++|+|++. ++++|+ .|+.|++||+.+++.+..+. +...|.
T Consensus 232 l~s~~~d~~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~ 307 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIPKFTKTN---HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVT 307 (401)
T ss_dssp EEEEETTSCEEEEETTCSSEEEEECC---CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEE
T ss_pred EEEEeCCCeEEEccCCCCCccEEecC---CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEE
Confidence 99999999999999999888777764 567899999999764 555654 79999999999999888875 668899
Q ss_pred EEEECCCCCeEEEE--eCCCcEEEEeCCCCCcce---eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q 016187 283 CIGFSRSSPWAATG--SMDQKLIIWDLQHSLPRS---TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTF 357 (394)
Q Consensus 283 ~v~~~~~~~~l~s~--s~dg~i~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 357 (394)
+++|+|++.+++++ +.||.|++|++....... ...|...|.+++|+|++++|++++.||.|++|++.+++.+...
T Consensus 308 ~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 308 SLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 99999999999995 489999999997643322 3468889999999999999999999999999999999887654
Q ss_pred e
Q 016187 358 S 358 (394)
Q Consensus 358 ~ 358 (394)
.
T Consensus 388 ~ 388 (401)
T 4aez_A 388 I 388 (401)
T ss_dssp -
T ss_pred c
Confidence 3
No 78
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-41 Score=303.35 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=214.0
Q ss_pred eEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCC--CceEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEE
Q 016187 100 ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS--GNLKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWM 175 (394)
Q Consensus 100 ~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~i 175 (394)
+..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.. ++.+.++.+|.++|.+++|+|. +++|++|+.|++|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 346789999999999999999999999999999999874 3667889999999999999864 789999999999999
Q ss_pred EeCCccc--eeeeecccCcCeEEEEECCC--CCeEEEEeCCCcEEEEcCCCCce--EEEEcCCCCcccCeEEEEEcCC--
Q 016187 176 WNADRAA--YLNMFSGHGSSVTCGDFTPD--GKTICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISAD-- 247 (394)
Q Consensus 176 w~~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~-- 247 (394)
||+.+++ .+..+.+|...|.+++|+|+ +++|++++.|++|++||++++.. ...+.+ |...+.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA---HAIGVNSASWAPATI 158 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC---CSSCEEEEEECCCC-
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec---ccCccceEeecCCcc
Confidence 9998763 45667789999999999997 89999999999999999987632 233333 5678999999997
Q ss_pred -----------CCEEEEEeCCCcEEEEECCCCc----EEEEeccCCCCEEEEEECCCC---CeEEEEeCCCcEEEEeCCC
Q 016187 248 -----------STLALSGSKDGSVHMVNITTGK----VVSSLVSHTDSIECIGFSRSS---PWAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 248 -----------~~~l~~g~~dg~i~i~d~~~~~----~~~~~~~h~~~i~~v~~~~~~---~~l~s~s~dg~i~iwd~~~ 309 (394)
++++++|+.|++|++||+++++ ....+.+|...|.+++|+|++ .+||+++.|++|+|||+..
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 5799999999999999998765 667888999999999999984 7999999999999999875
Q ss_pred CCc---c-ee--ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Q 016187 310 SLP---R-ST--CDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 310 ~~~---~-~~--~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~ 349 (394)
... . .. ..|...|.+++|+|++++|++++.||.|++|+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 321 1 11 3567889999999999999999999999999865
No 79
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-41 Score=318.29 Aligned_cols=281 Identities=17% Similarity=0.209 Sum_probs=242.1
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEE
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~ 145 (394)
.+....|+| ++.+||+|+.|+.+++|++.+++....+.+|...|++++|+|++++|++|+.|++|++||+.+++....+
T Consensus 99 ~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 99 YTAVDTAKL-QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp EEEEEEECS-SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred ceEEEEEec-CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 344446777 5678999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeeccc---CcC---------------------eEEEEECC
Q 016187 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH---GSS---------------------VTCGDFTP 201 (394)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h---~~~---------------------v~~~~~~~ 201 (394)
.+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..| ... +.+++|+|
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 999999999999999999999999999999999988887777643 333 44455688
Q ss_pred CCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCc-EEEEecc-CC
Q 016187 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGK-VVSSLVS-HT 278 (394)
Q Consensus 202 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~dg~i~i~d~~~~~-~~~~~~~-h~ 278 (394)
++++|++|+.||.|++||+++++.+..+.. .|...+++++|+|++. ++++|+.||.|++||+++++ ++..+.. |.
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~ 335 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPS--KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG 335 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECC--TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEccc--ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC
Confidence 999999999999999999999887766643 3567899999999998 99999999999999999875 3566665 67
Q ss_pred CCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC----------CcceeccCCCCEEEEEEeCCCC---EEEEEeCCCeEEE
Q 016187 279 DSIECIGFSRSSPWAATGSMDQKLIIWDLQHS----------LPRSTCDHEDGVTCLMWLGTSK---YVVTGCVDGKVRV 345 (394)
Q Consensus 279 ~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~----------~~~~~~~~~~~v~~~~~~~~~~---~l~sg~~dg~i~i 345 (394)
..|.++.+. ++.+|++++.|++|++|++... .......|...|.+++|+|++. .+++.+.+|.+.+
T Consensus 336 ~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~ 414 (420)
T 3vl1_A 336 TPINNVYFA-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCAL 414 (420)
T ss_dssp SCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEE
T ss_pred CCceEEEeC-CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEE
Confidence 788888655 6789999999999999998652 2223456788899999999999 7888888999999
Q ss_pred EECCC
Q 016187 346 WDSLS 350 (394)
Q Consensus 346 wd~~~ 350 (394)
|++..
T Consensus 415 ~~~~~ 419 (420)
T 3vl1_A 415 YNLSN 419 (420)
T ss_dssp EESCC
T ss_pred EeccC
Confidence 99754
No 80
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.3e-41 Score=302.93 Aligned_cols=247 Identities=19% Similarity=0.348 Sum_probs=223.2
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd 135 (394)
+...+.+|...|++++|+|+ +.+|+||+.|++|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.|++|++||
T Consensus 57 ~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTAD-GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEEEECCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred cceEEeCCcccEEEEEECCC-CCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 46678999999999999995 67899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCC------CEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE
Q 016187 136 PSSGNLKCTLEGPGGGVEWVSWHPRG------HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG 209 (394)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~------~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 209 (394)
+. ++.+..+.+|...|..++|+|.. ..+++++.|+.|++||+.+.+....+.+|...|.+++|+|++++|++|
T Consensus 136 ~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 136 IK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp TT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred CC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 86 56677888999999999999854 489999999999999999988888899999999999999999999999
Q ss_pred eCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc--------CCCCE
Q 016187 210 SDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS--------HTDSI 281 (394)
Q Consensus 210 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--------h~~~i 281 (394)
+.||+|++||+.+++.+..+.. ...+.+++|+|++.++++++.+ .+++|++..+..+..+.. |...+
T Consensus 215 ~~dg~i~iwd~~~~~~~~~~~~----~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v 289 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAMYTLSA----QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHA 289 (319)
T ss_dssp ETTCEEEEEETTTTEEEEEEEC----CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCE
T ss_pred eCCCeEEEEECCCCcEEEEecC----CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcce
Confidence 9999999999999988877764 3579999999999999888755 599999988877766542 45679
Q ss_pred EEEEECCCCCeEEEEeCCCcEEEEeCCC
Q 016187 282 ECIGFSRSSPWAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 282 ~~v~~~~~~~~l~s~s~dg~i~iwd~~~ 309 (394)
.+++|+|++++|++|+.|++|++||+.+
T Consensus 290 ~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 290 VSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred eEEEECCCCCEEEEeecCceEEEEEEee
Confidence 9999999999999999999999999754
No 81
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.9e-42 Score=310.79 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=209.5
Q ss_pred eecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCCCEEEEEEcC--CCCEEEEecCCCeEEEEe
Q 016187 102 EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHP--RGHIVLAGSEDSTVWMWN 177 (394)
Q Consensus 102 ~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~s~d~~i~iw~ 177 (394)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++. .+..+.+|.+.|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 467899999999999999999999999999999998775 4567889999999999986 478999999999999999
Q ss_pred CCccc--eeeeecccCcCeEEEEECCC--CCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCC------
Q 016187 178 ADRAA--YLNMFSGHGSSVTCGDFTPD--GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD------ 247 (394)
Q Consensus 178 ~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~------ 247 (394)
++++. ....+.+|...|.+++|+|+ +.+|++|+.|++|++||++.+...........|...+.++.|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 98763 45667899999999999997 789999999999999999876443323333446778899999997
Q ss_pred -----------CCEEEEEeCCCcEEEEECCCC---cEEEEeccCCCCEEEEEECCCC----CeEEEEeCCCcEEEEeCCC
Q 016187 248 -----------STLALSGSKDGSVHMVNITTG---KVVSSLVSHTDSIECIGFSRSS----PWAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 248 -----------~~~l~~g~~dg~i~i~d~~~~---~~~~~~~~h~~~i~~v~~~~~~----~~l~s~s~dg~i~iwd~~~ 309 (394)
+.++++|+.|++|++||++.+ +.+..+.+|...|.+++|+|++ .+|++++.|++|++|++..
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 468999999999999999755 4677888999999999999986 7899999999999999875
Q ss_pred C-----CcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Q 016187 310 S-----LPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 310 ~-----~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~ 349 (394)
. .......|...|.+++|+|++++|++|+.||.|++|+..
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 2 122334678899999999999999999999999999965
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-40 Score=315.07 Aligned_cols=286 Identities=26% Similarity=0.425 Sum_probs=248.9
Q ss_pred eeEeecCcccCE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEe
Q 016187 99 WASEIQGHKDSV-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (394)
Q Consensus 99 ~~~~~~~h~~~V-~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~ 177 (394)
....+.+|...| .++.| ++++|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|++ ++++|+.|++|++||
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 445788999885 66665 56799999999999999999999999999999999999999988 899999999999999
Q ss_pred CCccceeeeecccCcCeEEEEEC--CCCCeEEEEeCCCcEEEEcCCCCceEEE--------------------EcCCCCc
Q 016187 178 ADRAAYLNMFSGHGSSVTCGDFT--PDGKTICTGSDDATLRVWNPKSGENIHV--------------------IRGHPYH 235 (394)
Q Consensus 178 ~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------------~~~~~~~ 235 (394)
+.+++.+..+.+|...|.+++|+ +++++|++|+.||+|++||+.+++.... +.....|
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 99999999999999999999998 5789999999999999999987653221 1111224
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-
Q 016187 236 TEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS- 314 (394)
Q Consensus 236 ~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~- 314 (394)
...+.++ ++++.++++|+.|+.|++||+.+++.+..+..|...|.+++|+|++.++++++.|++|++||+.+.....
T Consensus 270 ~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 270 MASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp SSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 5556665 6789999999999999999999999999999999999999999999999999999999999998765443
Q ss_pred eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 315 TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 315 ~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
...|...|.++.|+ +.+|++|+.||.|++||+.+++....+. |...+..++|++++++|++++ ||.|++|++.+.
T Consensus 348 ~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 348 LQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp ECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred EeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 44688999999997 5899999999999999999988766554 667788899999999999999 899999998764
No 83
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-41 Score=307.08 Aligned_cols=272 Identities=19% Similarity=0.295 Sum_probs=212.1
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe--eeEeecCcccCEEEEEEcC--CCCEEEEEeCCCcEE
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD--WASEIQGHKDSVSSLAFSM--DGQLLASGGLDGLVQ 132 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~--~~~~~~~h~~~V~~v~~s~--~g~~l~t~s~d~~i~ 132 (394)
..++.+|.+.|++++|+|+ +.+||||+.|++|++||+.+++ .+..+.+|.++|++++|+| ++++|++|+.|++|+
T Consensus 6 ~~~~~~H~~~V~~v~~s~~-g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYY-GTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp --------CCEEEEEECGG-GCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eeecccccCeEEEeeEcCC-CCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 3456799999999999995 6789999999999999998764 4678999999999999986 489999999999999
Q ss_pred EEeCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEEEeCCccc---eeeeecccCcCeEEEEECCC---
Q 016187 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA---YLNMFSGHGSSVTCGDFTPD--- 202 (394)
Q Consensus 133 vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~--- 202 (394)
+||+.+++ ....+.+|...|.+++|+|+ +.+|++|+.|+.|++|++.... ....+.+|...+.+++|+|+
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99998874 45677889999999999998 7899999999999999997653 24566789999999999997
Q ss_pred --------------CCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCC----CEEEEEeCCCcEEEEE
Q 016187 203 --------------GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS----TLALSGSKDGSVHMVN 264 (394)
Q Consensus 203 --------------~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~g~~dg~i~i~d 264 (394)
+++|++|+.|++|++||++.+.....+.....|...|.+++|+|++ .+|++|+.|++|++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 4789999999999999997653222222233467889999999986 8899999999999999
Q ss_pred CCCC---c-EEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEe
Q 016187 265 ITTG---K-VVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGC 338 (394)
Q Consensus 265 ~~~~---~-~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 338 (394)
+.+. + ....+..|...|.+++|+|++.+||+++.|++|++|+.... ....++.-..+++..++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~---------g~~~~~~~~~~~~~~~~~~ 313 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD---------GQWVCISDVNKGQGSVSAS 313 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT---------SCEEEEEECC---------
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC---------CcEEEeeeccCCCCceeee
Confidence 8762 1 12234568899999999999999999999999999996422 1234444445555555543
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.2e-40 Score=307.86 Aligned_cols=309 Identities=20% Similarity=0.353 Sum_probs=247.1
Q ss_pred CCCCceeeeeccC----CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEee--cCcccCEEEEEEcCCCCEEEEE
Q 016187 52 QPDDSTHIFSGHS----DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLASG 125 (394)
Q Consensus 52 ~~~~~~~~~~~h~----~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~--~~h~~~V~~v~~s~~g~~l~t~ 125 (394)
.|..+..++.+-. =..+.|+|+++ ++||.| .|++|+|||..+++....+ .+|.+.|++|+|+|+|++||+|
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~~--n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasg 165 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSSG--NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVG 165 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTT--SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEE
T ss_pred cCCCCceEEECCCCcccccceeEEECCC--CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEE
Confidence 4455556665421 13577999974 478876 4999999999999887755 4688899999999999999999
Q ss_pred eCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc-ceeeeecccCcCeEEEEECCCCC
Q 016187 126 GLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTPDGK 204 (394)
Q Consensus 126 s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~~~~ 204 (394)
+.|++|+|||+.+++.+..+.+|...+.+++|+ +.++++|+.|+.+++|+.... ..+..+.+|...+..+.++|+++
T Consensus 166 s~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 166 TSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred ECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC
Confidence 999999999999999999999999999888775 579999999999999998764 45677889999999999999999
Q ss_pred eEEEEeCCCcEEEEcCCCCce----EEEEcCCCCcccCeEEEEEcCCCC-EEEE--EeCCCcEEEEECCCCcEEEEeccC
Q 016187 205 TICTGSDDATLRVWNPKSGEN----IHVIRGHPYHTEGLTCLTISADST-LALS--GSKDGSVHMVNITTGKVVSSLVSH 277 (394)
Q Consensus 205 ~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~-~l~~--g~~dg~i~i~d~~~~~~~~~~~~h 277 (394)
++++++.|+.+++|+..+++. +.... .+...|.+++++|.+. ++++ |+.|++|++||+.+++++..+..|
T Consensus 244 ~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~---~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~ 320 (420)
T 4gga_A 244 HLASGGNDNLVNVWPSAPGEGGWVPLQTFT---QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH 320 (420)
T ss_dssp EEEEEETTSCEEEEESSCCSSCSCCSEEEC---CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS
T ss_pred eeeeeeccccceEEeeccccccceeeeeec---ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc
Confidence 999999999999999987653 22222 3567899999999765 4444 457999999999999998888754
Q ss_pred CCCEEEEEECCCCCeEEEEe--CCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE
Q 016187 278 TDSIECIGFSRSSPWAATGS--MDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV 354 (394)
Q Consensus 278 ~~~i~~v~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 354 (394)
..+.++.|+|++..+++++ .|++|+|||+.+..... ..+|...|++++|+|++++|+||+.||+|++||+......
T Consensus 321 -~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 321 -SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp -SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred -cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 5788899999999888765 79999999998765443 4579999999999999999999999999999999887777
Q ss_pred EEeecccCceeEEEE
Q 016187 355 RTFSGHRDAIQAISV 369 (394)
Q Consensus 355 ~~~~~h~~~v~~l~~ 369 (394)
+..+.+...+....|
T Consensus 400 ~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 400 RRREREKASAAKSSL 414 (420)
T ss_dssp ---------------
T ss_pred chhhhccCCcccccc
Confidence 766666655544444
No 85
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8e-41 Score=304.05 Aligned_cols=275 Identities=12% Similarity=0.141 Sum_probs=239.7
Q ss_pred eEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---eEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEE
Q 016187 100 ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN---LKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWM 175 (394)
Q Consensus 100 ~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~i 175 (394)
.....+|.+.|++++|+|++++|++++.|+.|++|++.+++ ....+..|...|.+++|+|+++ +|++|+.|+.|++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 34456899999999999999999999999999999998877 2344567889999999999999 9999999999999
Q ss_pred EeC-Cccceeeeecc--cCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCC---------CceEEEEcCCCCcccCeEEEE
Q 016187 176 WNA-DRAAYLNMFSG--HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS---------GENIHVIRGHPYHTEGLTCLT 243 (394)
Q Consensus 176 w~~-~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~~~i~~~~ 243 (394)
|++ .+++. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++ ++.+..+. +...+.+++
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~ 157 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK----VKNKIFTMD 157 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS----SCCCEEEEE
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe----eCCceEEEE
Confidence 999 77654 66778 999999999999 99999999999999999876 44333222 567899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCC-Cc--EEEEeccCCCCEEEEEECC-CCCeEEEEeCCCcEEEEeCCCC------Ccc
Q 016187 244 ISADSTLALSGSKDGSVHMVNITT-GK--VVSSLVSHTDSIECIGFSR-SSPWAATGSMDQKLIIWDLQHS------LPR 313 (394)
Q Consensus 244 ~~~~~~~l~~g~~dg~i~i~d~~~-~~--~~~~~~~h~~~i~~v~~~~-~~~~l~s~s~dg~i~iwd~~~~------~~~ 313 (394)
++|++ +++++.|+.|++||+++ +. .......|...+.+++|+| ++.++++++.||.+++|++... ...
T Consensus 158 ~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 158 TNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp ECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred ecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 99987 89999999999999988 54 3344556888999999999 9999999999999999998754 222
Q ss_pred -eeccCC---------CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc-cCceeEEEEccCCCEEEEEeCC
Q 016187 314 -STCDHE---------DGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGH-RDAIQAISVSAHQDFLVSVSLD 382 (394)
Q Consensus 314 -~~~~~~---------~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~l~s~s~d 382 (394)
....|. ..|.+++|+|++++|++|+.||.|++||+.+++++..+.+| ..+|++++ |++++|++++.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence 223443 38999999999999999999999999999999999999998 99999999 999999999999
Q ss_pred Cc
Q 016187 383 GT 384 (394)
Q Consensus 383 g~ 384 (394)
|+
T Consensus 314 g~ 315 (342)
T 1yfq_A 314 DT 315 (342)
T ss_dssp TH
T ss_pred Cc
Confidence 99
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.6e-41 Score=315.53 Aligned_cols=282 Identities=19% Similarity=0.332 Sum_probs=232.1
Q ss_pred CcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-----------eEEEEecCC------------CCEEEEEEcCCC
Q 016187 105 GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN-----------LKCTLEGPG------------GGVEWVSWHPRG 161 (394)
Q Consensus 105 ~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 161 (394)
.|.+.|++++|+|+|++||+|+.||.|+||++.+++ ....+.+|. +.|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 378999999999999999999999999999998876 467788888 889999999998
Q ss_pred --CEEEEecCCCeEEEEeCCcccee----------------------------------------eeecccCcCeEEEEE
Q 016187 162 --HIVLAGSEDSTVWMWNADRAAYL----------------------------------------NMFSGHGSSVTCGDF 199 (394)
Q Consensus 162 --~~l~~~s~d~~i~iw~~~~~~~~----------------------------------------~~~~~h~~~v~~~~~ 199 (394)
.+|++++.|+.|++|++..+... ....+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764331 113679999999999
Q ss_pred CCCCCeEEEEeCCCcEEEEcCCC-CceEEEEc----CCCCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCcE---
Q 016187 200 TPDGKTICTGSDDATLRVWNPKS-GENIHVIR----GHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITTGKV--- 270 (394)
Q Consensus 200 ~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~----~~~~~~~~i~~~~~~~~~-~~l~~g~~dg~i~i~d~~~~~~--- 270 (394)
+|++++|++| .|+.|++||+.+ ++.+..+. ....|...|++++|+|++ .++++|+.||.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999999 799999999984 33333321 122467789999999998 9999999999999999999886
Q ss_pred -EEEeccCCC------------CEEEEEECCCCCeEEEEeCCCcEEEEeCCC-CCcce-eccCCCC--------------
Q 016187 271 -VSSLVSHTD------------SIECIGFSRSSPWAATGSMDQKLIIWDLQH-SLPRS-TCDHEDG-------------- 321 (394)
Q Consensus 271 -~~~~~~h~~------------~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~-~~~~~-~~~~~~~-------------- 321 (394)
+..+..|.. .|.+++|+|++.+|++++. +.|++||++. ..+.. ...|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 677888876 8999999999999999999 9999999975 43332 2233321
Q ss_pred -EEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc---------------------------------cCceeEE
Q 016187 322 -VTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGH---------------------------------RDAIQAI 367 (394)
Q Consensus 322 -v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h---------------------------------~~~v~~l 367 (394)
+..++|+|++++|++|+.||.|++||+.+++.+ .+.+| ...|..+
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 234899999999999999999999999998876 33333 3568899
Q ss_pred EEccCCCEEEEEeCCCcEEEEec
Q 016187 368 SVSAHQDFLVSVSLDGTARVFEI 390 (394)
Q Consensus 368 ~~~~~~~~l~s~s~dg~i~iw~~ 390 (394)
+|+|++++||+++.++ +.+|.-
T Consensus 423 ~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 423 AWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EECSSSSEEEEECSSC-EEEEEC
T ss_pred EECCCCCEEEEEecce-eeeecc
Confidence 9999999999998887 777763
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=316.91 Aligned_cols=283 Identities=13% Similarity=0.210 Sum_probs=234.7
Q ss_pred ccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe-----------eeEeecCcc------------cCEEEEEEcCC
Q 016187 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-----------WASEIQGHK------------DSVSSLAFSMD 118 (394)
Q Consensus 62 ~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~-----------~~~~~~~h~------------~~V~~v~~s~~ 118 (394)
.|.+.|++++|+|+ +.+||+|+.|+.|++|++.+++ ....+.+|. +.|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~~-g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHS-GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSS-SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCC-CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 36789999999994 6789999999999999998776 577899998 88999999999
Q ss_pred C--CEEEEEeCCCcEEEEeCCCCceE---------------------------------------EE-EecCCCCEEEEE
Q 016187 119 G--QLLASGGLDGLVQIWDPSSGNLK---------------------------------------CT-LEGPGGGVEWVS 156 (394)
Q Consensus 119 g--~~l~t~s~d~~i~vwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~ 156 (394)
+ .+|++++.|++|++||+.+++.. .. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 89999999999999998764331 12 357889999999
Q ss_pred EcCCCCEEEEecCCCeEEEEeCCc-cceee-------eecccCcCeEEEEECCCC-CeEEEEeCCCcEEEEcCCCCce--
Q 016187 157 WHPRGHIVLAGSEDSTVWMWNADR-AAYLN-------MFSGHGSSVTCGDFTPDG-KTICTGSDDATLRVWNPKSGEN-- 225 (394)
Q Consensus 157 ~~~~~~~l~~~s~d~~i~iw~~~~-~~~~~-------~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~-- 225 (394)
|+|++++|++| .|+.|++||+.. .+.+. .+.+|...|.+++|+|++ ++|++|+.||+|++||+++++.
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 99999999998 799999999984 44443 367899999999999998 9999999999999999998876
Q ss_pred --EEEEcCCCC---------cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CcEEEEeccCCCC-------------
Q 016187 226 --IHVIRGHPY---------HTEGLTCLTISADSTLALSGSKDGSVHMVNITT-GKVVSSLVSHTDS------------- 280 (394)
Q Consensus 226 --~~~~~~~~~---------~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~-~~~~~~~~~h~~~------------- 280 (394)
+..+..+.. |...+.+++|+|+++++++++. +.|++||+++ ++++..+..|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 566665321 1137999999999999999999 9999999997 8888888777532
Q ss_pred --EEEEEECCCCCeEEEEeCCCcEEEEeCCCCCccee---------------------------------ccCCCCEEEE
Q 016187 281 --IECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRST---------------------------------CDHEDGVTCL 325 (394)
Q Consensus 281 --i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~---------------------------------~~~~~~v~~~ 325 (394)
+..++|+|++++|++++.||.|++||+.+...... ..+...|..+
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 422 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHT 422 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEE
Confidence 23489999999999999999999999976543221 1334568899
Q ss_pred EEeCCCCEEEEEeCCCeEEEEEC
Q 016187 326 MWLGTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 326 ~~~~~~~~l~sg~~dg~i~iwd~ 348 (394)
+|+|++++|++++.++ +++|..
T Consensus 423 ~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 423 AWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EECSSSSEEEEECSSC-EEEEEC
T ss_pred EECCCCCEEEEEecce-eeeecc
Confidence 9999999999998776 778864
No 88
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-39 Score=293.17 Aligned_cols=253 Identities=24% Similarity=0.416 Sum_probs=228.2
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
.....+.+|...|.+++|+|+ +.+|++|+.|+.+++||+.+++.+..+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 56 ~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iw 134 (312)
T 4ery_A 56 KFEKTISGHKLGISDVAWSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 134 (312)
T ss_dssp CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ccchhhccCCCceEEEEEcCC-CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 345678899999999999995 6789999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee-cccCcCeEEEEECCCCCeEEEEeCCC
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SGHGSSVTCGDFTPDGKTICTGSDDA 213 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg 213 (394)
|+.+++....+..|..+|.+++|+|+++++++++.|+.|++||+.+++.+..+ ..+...+.+++|+|++++|++++.|+
T Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 214 (312)
T 4ery_A 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 214 (312)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT
T ss_pred ECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999988776655 35667899999999999999999999
Q ss_pred cEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeE
Q 016187 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWA 293 (394)
Q Consensus 214 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l 293 (394)
.|++||+++++.+..+.++......+......+++.++++|+.||.|++||+.+++.+..+.+|...|.+++|+|+++++
T Consensus 215 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 294 (312)
T 4ery_A 215 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENII 294 (312)
T ss_dssp EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEE
T ss_pred eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCce
Confidence 99999999999888887654333334344445788999999999999999999999999999999999999999999999
Q ss_pred EEEe--CCCcEEEEeCC
Q 016187 294 ATGS--MDQKLIIWDLQ 308 (394)
Q Consensus 294 ~s~s--~dg~i~iwd~~ 308 (394)
++++ .|++|++|+..
T Consensus 295 ~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 295 ASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECTTTCCEEEEECC
T ss_pred EEEEccCCccEEEecCC
Confidence 9987 69999999864
No 89
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.9e-41 Score=308.73 Aligned_cols=280 Identities=15% Similarity=0.152 Sum_probs=222.7
Q ss_pred CcEEEEEEcCCCCcEEEEecCCC-------eEEEEEcCCCee----------eEeecCcccCEEEEEEcCCCCEEEEE--
Q 016187 65 DEVYSVACSPTDATLVATGGGDD-------KGFFWRINQGDW----------ASEIQGHKDSVSSLAFSMDGQLLASG-- 125 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~-------~v~~w~~~~~~~----------~~~~~~h~~~V~~v~~s~~g~~l~t~-- 125 (394)
-+|++++|+|+ +++||+||+|. .|++|++..... ...|.+|.+.|.+++++ +..+++|
T Consensus 15 ~PV~sv~fs~d-g~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNN-DTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SCEEEEEEEET-TEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCEEEEEEeCC-CcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 48999999994 67899987654 599999865431 12467899999888765 4566665
Q ss_pred ---------eCCCcEEEEeCCCCceEEE----E-----ecCCCCEEEEEEcCCCCEEEE--ecCCCeEEEEeCCccceee
Q 016187 126 ---------GLDGLVQIWDPSSGNLKCT----L-----EGPGGGVEWVSWHPRGHIVLA--GSEDSTVWMWNADRAAYLN 185 (394)
Q Consensus 126 ---------s~d~~i~vwd~~~~~~~~~----~-----~~~~~~v~~~~~~~~~~~l~~--~s~d~~i~iw~~~~~~~~~ 185 (394)
+.|+.+++|++.+...... . ..+...+..++|+|+|+++++ ++.|++|++||+.+++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 3577899998766543211 1 123456889999999998754 5578999999999998887
Q ss_pred eecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC----cEE
Q 016187 186 MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG----SVH 261 (394)
Q Consensus 186 ~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg----~i~ 261 (394)
.+. |...|.+++|+|+|++|++++.++ +++|+..+++.+.... ...|...+.+++|+|+++++++++.|+ .++
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~-~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKT-DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEEC-CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeee-cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 774 778899999999999999998655 5666666666554332 123566799999999999999999887 688
Q ss_pred EEECCCCcE----EEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCccee--ccCCCCEEEEEEeCCCCEEE
Q 016187 262 MVNITTGKV----VSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRST--CDHEDGVTCLMWLGTSKYVV 335 (394)
Q Consensus 262 i~d~~~~~~----~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~ 335 (394)
+|++..... ...+..|..+|++++|+|++++||+|+.|++|+|||+.+..+... .+|...|++++|+|++++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la 328 (365)
T 4h5i_A 249 KISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA 328 (365)
T ss_dssp EEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE
T ss_pred ecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE
Confidence 899877643 345778999999999999999999999999999999988765443 47999999999999999999
Q ss_pred EEeCCCeEEEEECCC
Q 016187 336 TGCVDGKVRVWDSLS 350 (394)
Q Consensus 336 sg~~dg~i~iwd~~~ 350 (394)
+||.|++|+||++..
T Consensus 329 S~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 329 SVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSEEEEEECCT
T ss_pred EEeCCCeEEEEEcCC
Confidence 999999999999853
No 90
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.7e-40 Score=301.61 Aligned_cols=298 Identities=18% Similarity=0.267 Sum_probs=227.1
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC----eeeEeecCcccCEEEEEEcC--CCCEEEEEeCCCc
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSM--DGQLLASGGLDGL 130 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~----~~~~~~~~h~~~V~~v~~s~--~g~~l~t~s~d~~ 130 (394)
..++.+|.+.|++++|+|+ +.+||+|+.|+.|++|++.++ +....+.+|...|++++|+| ++++|++|+.|+.
T Consensus 4 ~~~~~gH~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFY-GRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCEECCCSSCEEEEEECSS-SSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccCcccccceeEEEEcCC-CCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4567899999999999995 678999999999999999876 46677899999999999999 6999999999999
Q ss_pred EEEEeCCCC---------ceEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEEEeCCccceeeeec-----------
Q 016187 131 VQIWDPSSG---------NLKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAAYLNMFS----------- 188 (394)
Q Consensus 131 i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~iw~~~~~~~~~~~~----------- 188 (394)
|++||+.++ +....+..|...|.+++|+|+ +.++++++.|+.|++||+.+++.+..+.
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999887 456778889999999999999 9999999999999999998766544332
Q ss_pred --ccCcCeEEEEECCC---CCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCC----CEEEEEeCCCc
Q 016187 189 --GHGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS----TLALSGSKDGS 259 (394)
Q Consensus 189 --~h~~~v~~~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~l~~g~~dg~ 259 (394)
+|...+.+++|+|+ +.+|++++.++.+.+|+...++.. .+.....|...|++++|+|++ .++++|+.||.
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLH-VAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEE-EEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCcee-eeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 67889999999997 899999999999988887776542 222223467789999999998 89999999999
Q ss_pred EEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeC
Q 016187 260 VHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCV 339 (394)
Q Consensus 260 i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~ 339 (394)
|++||++.+........+...+.....++....+ ......+..
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~ 284 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMD-------------------------------------AQGRSDSNT 284 (351)
T ss_dssp EEEEEEEECC----------------------------------------------------------------------
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccc-------------------------------------ccccccccc
Confidence 9999998765433222111111111111111000 011122334
Q ss_pred CCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 340 DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 340 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
...+.+|+....+++..+.+|...|++++|+|++++|++++.||.|++|++...
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 285 EEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp ------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred ceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 556777877778889999999999999999999999999999999999998753
No 91
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=303.59 Aligned_cols=293 Identities=19% Similarity=0.265 Sum_probs=246.1
Q ss_pred EEcCCCeeeEeecCcccCEEEEEEcCC---CCEEEEEeCCCcEEEEeCCC-CceE-EEEecCCCCEEEEEEcCCCCEEEE
Q 016187 92 WRINQGDWASEIQGHKDSVSSLAFSMD---GQLLASGGLDGLVQIWDPSS-GNLK-CTLEGPGGGVEWVSWHPRGHIVLA 166 (394)
Q Consensus 92 w~~~~~~~~~~~~~h~~~V~~v~~s~~---g~~l~t~s~d~~i~vwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~ 166 (394)
|+....+.+..+.+|.+.|++++|+|+ |++|++|+.|+.|++||+.+ +... ..+.+|.+.|.+++|+|++++|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 344556677789999999999999999 69999999999999999987 5444 678889999999999999999999
Q ss_pred ecCCCeEEEEeCCccceeeeecccCcCeEEEEE--CCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEE
Q 016187 167 GSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDF--TPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTI 244 (394)
Q Consensus 167 ~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~ 244 (394)
++.|+.|++|++.+++.+. +.+|...|.+++| +|++++|++++.||.|++||+++++.+..+..+ ..+.++.+
T Consensus 104 ~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~ 178 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP----ERCYCADV 178 (368)
T ss_dssp EETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS----SCEEEEEE
T ss_pred EcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC----CCceEEEe
Confidence 9999999999999887665 5679999999999 899999999999999999999999888777643 24555555
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEe--ccCCCCEEEEEECCCCCe----EEEEeCCCcEEEEeCCCCCc----ce
Q 016187 245 SADSTLALSGSKDGSVHMVNITTGKVVSSL--VSHTDSIECIGFSRSSPW----AATGSMDQKLIIWDLQHSLP----RS 314 (394)
Q Consensus 245 ~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~--~~h~~~i~~v~~~~~~~~----l~s~s~dg~i~iwd~~~~~~----~~ 314 (394)
. ...+++++.++.+++|++......... ..+...+.++.+.++... +++++.|+.|++|++..... ..
T Consensus 179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred c--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 5 458889999999999999876543332 224455667776665554 99999999999999976532 12
Q ss_pred eccCCC------------CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCC
Q 016187 315 TCDHED------------GVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLD 382 (394)
Q Consensus 315 ~~~~~~------------~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d 382 (394)
...|.. .|++++|+|++++|++|+.||.|++||+.+++++..+.+|..+|++++|+|++++|++++.|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 223333 69999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecc
Q 016187 383 GTARVFEIA 391 (394)
Q Consensus 383 g~i~iw~~~ 391 (394)
+..+.|++-
T Consensus 337 ~~~~~~~~~ 345 (368)
T 3mmy_A 337 DWSKGHEFY 345 (368)
T ss_dssp CSTTCGGGC
T ss_pred ccccccccc
Confidence 876666543
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.2e-40 Score=309.91 Aligned_cols=291 Identities=26% Similarity=0.500 Sum_probs=242.2
Q ss_pred eeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 016187 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (394)
Q Consensus 60 ~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~ 139 (394)
..+|...|+++++ ++.+|++|+.|++|++||+.+++....+.+|...|.+++| ++++|++|+.||+|++||+.++
T Consensus 129 ~~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 129 RSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred ccCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 3467788999887 3568999999999999999999999999999999999998 7889999999999999999999
Q ss_pred ceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcccee---eeecccCcCeEEEEECCCCCeEEEEeCCCcEE
Q 016187 140 NLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL---NMFSGHGSSVTCGDFTPDGKTICTGSDDATLR 216 (394)
Q Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 216 (394)
+....+.+|...|.+++|++ ..+++|+.|+.|++||+.++... ..+.+|...|.+++| ++++|++|+.||.|+
T Consensus 204 ~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 279 (435)
T ss_dssp CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEE
T ss_pred cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEE
Confidence 99999999999999999974 58999999999999999877654 667899999999999 788999999999999
Q ss_pred EEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEE
Q 016187 217 VWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATG 296 (394)
Q Consensus 217 vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~ 296 (394)
+||+++++.+..+.+ |...+.++.+ ++.++++|+.||.|++||+++++++..+..|...|.+++| ++.+|++|
T Consensus 280 vwd~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 280 VWNTSTCEFVRTLNG---HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp EEETTTCCEEEEEEC---CSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred EEECCcCcEEEEEcC---CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 999999998888775 4567888888 4689999999999999999999999999999999999999 67899999
Q ss_pred eCCCcEEEEeCCCCC----------cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeE
Q 016187 297 SMDQKLIIWDLQHSL----------PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQA 366 (394)
Q Consensus 297 s~dg~i~iwd~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 366 (394)
+.||.|++||+.... ......|...|.+++| ++.+|++|+.||.|++||+.+......... ..+...
T Consensus 353 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~~~~ 429 (435)
T 1p22_A 353 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP-RSPSRT 429 (435)
T ss_dssp ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------------------
T ss_pred eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCC-CCCccc
Confidence 999999999985432 2334578889999999 788999999999999999987765543332 223444
Q ss_pred EEE
Q 016187 367 ISV 369 (394)
Q Consensus 367 l~~ 369 (394)
+.|
T Consensus 430 ~~~ 432 (435)
T 1p22_A 430 YTY 432 (435)
T ss_dssp ---
T ss_pred eee
Confidence 444
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.8e-40 Score=311.11 Aligned_cols=276 Identities=27% Similarity=0.473 Sum_probs=243.7
Q ss_pred ecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc
Q 016187 103 IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA 182 (394)
Q Consensus 103 ~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~ 182 (394)
..+|...|.+++| ++++|++|+.|+.|++||+.+++....+.+|.+.|.+++| +++++++|+.||.|++||+.+++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence 3457788998876 7899999999999999999999999999999999999998 78899999999999999999999
Q ss_pred eeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 016187 183 YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHM 262 (394)
Q Consensus 183 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i 262 (394)
.+..+.+|...|.+++|++ .++++|+.||.|++||+.+++..........|...+.++.+ ++.++++|+.||.|++
T Consensus 205 ~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 205 MLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 9999999999999999974 59999999999999999988765322222336678999888 7889999999999999
Q ss_pred EECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEEEEEeCCC
Q 016187 263 VNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYVVTGCVDG 341 (394)
Q Consensus 263 ~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~sg~~dg 341 (394)
||+++++.+..+..|...|.++.++ +.++++|+.||.|++||+++..... ...|...|.++.| ++.+|++|+.||
T Consensus 281 wd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg 356 (435)
T 1p22_A 281 WNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDG 356 (435)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS
T ss_pred EECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCC
Confidence 9999999999999999999999994 6799999999999999998765443 4468889999988 788999999999
Q ss_pred eEEEEECCCCe---------EEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 342 KVRVWDSLSGD---------CVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 342 ~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
.|++||+.+++ ++..+.+|.+.|++++| ++++|++|+.||+|++|++.+
T Consensus 357 ~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 357 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred cEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 99999987666 88899999999999999 788999999999999999865
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.1e-39 Score=306.01 Aligned_cols=282 Identities=28% Similarity=0.549 Sum_probs=250.6
Q ss_pred CCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEE
Q 016187 96 QGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWM 175 (394)
Q Consensus 96 ~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~i 175 (394)
..+....+.+|.+.|.. +++++|++|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+ +.++++|+.|+.|++
T Consensus 107 ~~~~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 107 ELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKV 183 (445)
T ss_dssp CCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred CcceeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEE
Confidence 33445678999987533 355578999999999999999999999999999999999999998 569999999999999
Q ss_pred EeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe
Q 016187 176 WNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS 255 (394)
Q Consensus 176 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~ 255 (394)
|++.+++.+..+.+|...|.+++|+ ++.+++|+.||+|++||+.+++.+..+.+ |...+.++.+ ++.++++|+
T Consensus 184 wd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~~~~v~~~~~--~~~~l~~~~ 256 (445)
T 2ovr_B 184 WNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMG---HVAAVRCVQY--DGRRVVSGA 256 (445)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEEC---CSSCEEEEEE--CSSCEEEEE
T ss_pred EECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcC---CcccEEEEEE--CCCEEEEEc
Confidence 9999999999999999999999995 57899999999999999999998888765 4667999988 788999999
Q ss_pred CCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEE
Q 016187 256 KDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYV 334 (394)
Q Consensus 256 ~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l 334 (394)
.||.|++||+++++.+..+..|...|.++.| ++.++++++.|+.|++||+.+..... ...|...+.++.+. ++++
T Consensus 257 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l 332 (445)
T 2ovr_B 257 YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNIL 332 (445)
T ss_dssp TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEE
T ss_pred CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEE
Confidence 9999999999999999999999999999999 78899999999999999998765443 34677788888774 5799
Q ss_pred EEEeCCCeEEEEECCCCeEEEEeec---ccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 335 VTGCVDGKVRVWDSLSGDCVRTFSG---HRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 335 ~sg~~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
++|+.||.|++||+.+++++..+.+ |...|.+++|+ +++|++|+.||.|++|++.+.
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 9999999999999999999999986 88999999995 589999999999999998764
No 95
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-41 Score=321.35 Aligned_cols=286 Identities=12% Similarity=0.093 Sum_probs=225.5
Q ss_pred eeeeccCCcEEEEEEcCC-----CCcEEEEecCCCeEEEEEcCCCee-----------eEeecCcccCEEEEEEcCCCCE
Q 016187 58 HIFSGHSDEVYSVACSPT-----DATLVATGGGDDKGFFWRINQGDW-----------ASEIQGHKDSVSSLAFSMDGQL 121 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~-----~~~~lasg~~d~~v~~w~~~~~~~-----------~~~~~~h~~~V~~v~~s~~g~~ 121 (394)
..+.+|.+.|++|+|+|. ++.+||||+.|++|++|++..++. ...+.+|...|++++|+|++ +
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 346788999999999995 246999999999999999976532 23678999999999999864 8
Q ss_pred EEEEeCCCcEEEEeCCCCc-eEEEEecCCCCEEEE--EEcCCC-CEEEEecCCCeEEEEeCCccceeeeecccCc--CeE
Q 016187 122 LASGGLDGLVQIWDPSSGN-LKCTLEGPGGGVEWV--SWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMFSGHGS--SVT 195 (394)
Q Consensus 122 l~t~s~d~~i~vwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~--~v~ 195 (394)
|++|+.||+|++||+.++. ....+.+|...|.++ +|+|++ ++|++|+.|++|++||+++++....+.+|.. .|.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 9999999999999998774 445688999999999 567887 8999999999999999998887777777753 578
Q ss_pred EEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 016187 196 CGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (394)
Q Consensus 196 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 275 (394)
+++|+|+++.+++++.|++|++||++++.++..+.+ |...|++++|+|+++++++|+.|++|++||+..+ .+..+.
T Consensus 360 ~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g---H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~ 435 (524)
T 2j04_B 360 PVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS---RETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIK 435 (524)
T ss_dssp CEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE---CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC-
T ss_pred ceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec---CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccc
Confidence 999999999999999999999999999888777765 5678999999999999999999999999998653 221111
Q ss_pred c-----CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCC---EEEEEeCCCeEEEEE
Q 016187 276 S-----HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSK---YVVTGCVDGKVRVWD 347 (394)
Q Consensus 276 ~-----h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~sg~~dg~i~iwd 347 (394)
. +...+.+++|+|++..+. ...+-.+..|+..........+|...|.+++|+|+++ .|++|+.+|.|+||+
T Consensus 436 ~~~~~~~~~~v~~v~~sp~g~~~~-~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 436 NSSATQKSLRLWKWDYSIKDDKYR-IDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp -----CCCCEEEECBCCSSSCEEE-ECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred cCccceeeeEEEEeccCCCCCeEE-ccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 1 122477899999998542 2222222223322334445567899999999999964 999999999999999
Q ss_pred CC
Q 016187 348 SL 349 (394)
Q Consensus 348 ~~ 349 (394)
+.
T Consensus 515 l~ 516 (524)
T 2j04_B 515 LS 516 (524)
T ss_dssp CS
T ss_pred cc
Confidence 75
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=286.18 Aligned_cols=295 Identities=20% Similarity=0.322 Sum_probs=242.2
Q ss_pred CCCCCceeeeec--cCC--cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEee--cCcccCEEEEEEcCCCCEEEE
Q 016187 51 EQPDDSTHIFSG--HSD--EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLAS 124 (394)
Q Consensus 51 ~~~~~~~~~~~~--h~~--~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~--~~h~~~V~~v~~s~~g~~l~t 124 (394)
..|..+.+++.+ ..+ ..++|+|+|+ .+||+| .|++|+|||+.+++.+..+ .+|...|++++|+|+|++|++
T Consensus 8 ~~p~~p~rvldap~~~~d~y~~~l~WS~~--~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 8 YIPSLPDRILDAPEIRNDYYLNLVDWSSG--NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp CCCSSCSEEEECTTCCCCTTCBCEEECTT--SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred ccCCCCCEEeeCCCCcccccceEEEECCC--CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 345556666653 222 2467999985 377775 5999999999999988766 468889999999999999999
Q ss_pred EeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc-ceeeeecccCcCeEEEEECCCC
Q 016187 125 GGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTPDG 203 (394)
Q Consensus 125 ~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~~~ 203 (394)
|+.|++|++|++.+++.+..+.+|...+.++. +++..+++++.++.+++|+.... ..+..+.+|...+.++.+.+++
T Consensus 85 gs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 85 GTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EECCCcEEEeecCCceeEEEecCccceEEEee--cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 99999999999999999999999998887655 45679999999999999998765 4556788999999999999999
Q ss_pred CeEEEEeCCCcEEEEcCCCCceEEE-EcCCCCcccCeEEEEEcCCCCEE---EEEeCCCcEEEEECCCCcEEEEeccCCC
Q 016187 204 KTICTGSDDATLRVWNPKSGENIHV-IRGHPYHTEGLTCLTISADSTLA---LSGSKDGSVHMVNITTGKVVSSLVSHTD 279 (394)
Q Consensus 204 ~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l---~~g~~dg~i~i~d~~~~~~~~~~~~h~~ 279 (394)
++|++++.|++|++||+++++.... ......+...+.++.++|.+..+ ++++.+++|++||.......... .+..
T Consensus 163 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~ 241 (318)
T 4ggc_A 163 RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHS 241 (318)
T ss_dssp SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSS
T ss_pred CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-ccee
Confidence 9999999999999999987653211 11112355678999999976533 45678899999999988776554 4677
Q ss_pred CEEEEEECCCCCeEEEEe--CCCcEEEEeCCCCCcce-eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Q 016187 280 SIECIGFSRSSPWAATGS--MDQKLIIWDLQHSLPRS-TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSG 351 (394)
Q Consensus 280 ~i~~v~~~~~~~~l~s~s--~dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~ 351 (394)
.+..+.|+|.+..+++++ .|++|++||+.+..... ..+|...|++++|+|++++|++|+.||+|+|||+...
T Consensus 242 ~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 242 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 899999999999887654 79999999998765543 4579999999999999999999999999999998654
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-39 Score=296.13 Aligned_cols=294 Identities=17% Similarity=0.230 Sum_probs=245.4
Q ss_pred CCCCCceeeeeccCCcEEEEEEcCCC--CcEEEEecCCCeEEEEEcCC-Ceee-EeecCcccCEEEEEEcCCCCEEEEEe
Q 016187 51 EQPDDSTHIFSGHSDEVYSVACSPTD--ATLVATGGGDDKGFFWRINQ-GDWA-SEIQGHKDSVSSLAFSMDGQLLASGG 126 (394)
Q Consensus 51 ~~~~~~~~~~~~h~~~v~~~~~~p~~--~~~lasg~~d~~v~~w~~~~-~~~~-~~~~~h~~~V~~v~~s~~g~~l~t~s 126 (394)
..|......+.+|.+.|++++|+|++ +.+|++|+.|+.+++|++.+ +..+ ..+.+|...|++++|+|++++|++++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 35666788899999999999999975 68999999999999999986 4444 78899999999999999999999999
Q ss_pred CCCcEEEEeCCCCceEEEEecCCCCEEEEEE--cCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCC
Q 016187 127 LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSW--HPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (394)
Q Consensus 127 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 204 (394)
.|+.|++||+.+++... +..|...|.+++| +|++++|++++.|+.|++||+.+++.+..+..+. .+.++.+. ..
T Consensus 106 ~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~ 181 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YP 181 (368)
T ss_dssp TTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TT
T ss_pred CCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CC
Confidence 99999999999988765 5668899999999 8899999999999999999999988888887665 55566665 45
Q ss_pred eEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCE----EEEEeCCCcEEEEECCCC---cEEEEeccC
Q 016187 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTL----ALSGSKDGSVHMVNITTG---KVVSSLVSH 277 (394)
Q Consensus 205 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----l~~g~~dg~i~i~d~~~~---~~~~~~~~h 277 (394)
.+++++.++.+++|++........... ........++.+.++... +++++.|+.|++|++... +.+..+..|
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 260 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIE-SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 260 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECC-CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECS
T ss_pred eeEEEeCCCcEEEEEeccccchhhhcc-ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeee
Confidence 888999999999999987654433322 123345666666665544 999999999999999887 556667777
Q ss_pred CC------------CEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcc-eeccCCCCEEEEEEeCCCCEEEEEeCCCeEE
Q 016187 278 TD------------SIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPR-STCDHEDGVTCLMWLGTSKYVVTGCVDGKVR 344 (394)
Q Consensus 278 ~~------------~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~ 344 (394)
.. +|.+++|+|++.+|++++.||.|++||+.+.... ....|...|.+++|+|++++|++|+.|+..+
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTT
T ss_pred ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccc
Confidence 65 7999999999999999999999999999876443 3346788999999999999999999998666
Q ss_pred EEECC
Q 016187 345 VWDSL 349 (394)
Q Consensus 345 iwd~~ 349 (394)
.|+..
T Consensus 341 ~~~~~ 345 (368)
T 3mmy_A 341 GHEFY 345 (368)
T ss_dssp CGGGC
T ss_pred ccccc
Confidence 55543
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.1e-39 Score=294.72 Aligned_cols=280 Identities=13% Similarity=0.096 Sum_probs=240.7
Q ss_pred eeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe---eeEeecCcccCEEEEEEcCCCC-EEEEEeCCCcEEE
Q 016187 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQI 133 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~---~~~~~~~h~~~V~~v~~s~~g~-~l~t~s~d~~i~v 133 (394)
.+..+|.+.|++++|+|+ +.+|++|+.|+.+++|++.+++ ....+.+|...|.+++|+|+++ +|++|+.|+.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~-~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPS-KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp ECSSCCSSCEEEEEEEGG-GTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ecccCCCCcEEEEEEcCC-CCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 345689999999999995 5688999999999999998876 3445668999999999999999 9999999999999
Q ss_pred EeC-CCCceEEEEec--CCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCc---------cceeeeecccCcCeEEEEECC
Q 016187 134 WDP-SSGNLKCTLEG--PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR---------AAYLNMFSGHGSSVTCGDFTP 201 (394)
Q Consensus 134 wd~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~---------~~~~~~~~~h~~~v~~~~~~~ 201 (394)
||+ .+++. ..+.. |...|.+++|+| +.++++++.|+.|++|++.+ .+.+..+. |...+.+++|+|
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 999 77755 66777 999999999999 99999999999999999987 77666666 889999999999
Q ss_pred CCCeEEEEeCCCcEEEEcCCC-CceE-EEEcCCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC------cEEE
Q 016187 202 DGKTICTGSDDATLRVWNPKS-GENI-HVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTG------KVVS 272 (394)
Q Consensus 202 ~~~~l~s~~~dg~i~vwd~~~-~~~~-~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~dg~i~i~d~~~~------~~~~ 272 (394)
++ +++++.|+.|++||+++ +... .... ..+...+.+++++| ++.++++++.||.|++|++... +...
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEE--SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEE--CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeee--cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 87 99999999999999988 5432 2121 12456799999999 9999999999999999999876 6777
Q ss_pred EeccCCC---------CEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-eccC-CCCEEEEEEeCCCCEEEEEeCCC
Q 016187 273 SLVSHTD---------SIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS-TCDH-EDGVTCLMWLGTSKYVVTGCVDG 341 (394)
Q Consensus 273 ~~~~h~~---------~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~sg~~dg 341 (394)
.+..|.. .|.+++|+|++.+|++++.||.|++||+.+..... ...| ...|.+++ |++++|++|+.||
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 7777765 99999999999999999999999999998765443 3456 88899998 9999999999999
Q ss_pred e-EEEEE
Q 016187 342 K-VRVWD 347 (394)
Q Consensus 342 ~-i~iwd 347 (394)
. .+.|.
T Consensus 315 ~~~~~~~ 321 (342)
T 1yfq_A 315 TFKTNAA 321 (342)
T ss_dssp HHHHCSS
T ss_pred ccccccc
Confidence 8 55444
No 99
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-40 Score=311.09 Aligned_cols=293 Identities=12% Similarity=0.040 Sum_probs=236.1
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEE
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC 143 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~ 143 (394)
...|.+|+|+| +++++||++.|++|+ +...+ ..+.+|...|++++|+|+| .++.+.+|+.... ...
T Consensus 15 ~~~v~sv~~Sp-DG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~ 80 (588)
T 2j04_A 15 EDWKNNLTWAR-DGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GLL 80 (588)
T ss_dssp SSSSCCEEECT-TSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CSS
T ss_pred hccEEEEEECC-CCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eEe
Confidence 46889999999 578999999999999 64444 4568999999999999999 4666666654322 222
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCc-----CeEEEEECCCCCeEEEEeCCCcEEEE
Q 016187 144 TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS-----SVTCGDFTPDGKTICTGSDDATLRVW 218 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~dg~i~vw 218 (394)
++ .+.+.|.+++|+|+|..|++++.||.+++|+.+. ++..+. |.. .+.+++|+|+|++||+|+.||+|++|
T Consensus 81 ~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 81 NS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp TT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred ec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 22 3478899999999999999999999999999655 556666 665 49999999999999999999999999
Q ss_pred cCCCCce-------EEEEcCC-CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE---EEEe-ccCCCCEEEEEE
Q 016187 219 NPKSGEN-------IHVIRGH-PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV---VSSL-VSHTDSIECIGF 286 (394)
Q Consensus 219 d~~~~~~-------~~~~~~~-~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~---~~~~-~~h~~~i~~v~~ 286 (394)
|+.++.. +..++.+ ..|...|.+++|+|++ +++++.|+++++|++..++. ..++ ..|...|.+++|
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 9998752 4555322 2366789999999999 78899999999999988773 3556 478899999999
Q ss_pred CCCCCeEEEEeCCCcEEEEeCCCCCc-ceeccCCCCEEEEEE--eCCCCEEEEEeCCCeEEEEECCC-------------
Q 016187 287 SRSSPWAATGSMDQKLIIWDLQHSLP-RSTCDHEDGVTCLMW--LGTSKYVVTGCVDGKVRVWDSLS------------- 350 (394)
Q Consensus 287 ~~~~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~~~~v~~~~~--~~~~~~l~sg~~dg~i~iwd~~~------------- 350 (394)
+ +.++|+++ +++|++||+..... ....+|...+..++| +|++..|++++.+|+ ++|....
T Consensus 235 s--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~ 310 (588)
T 2j04_A 235 V--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYL 310 (588)
T ss_dssp E--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHH
T ss_pred E--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEc
Confidence 9 58999987 69999999987766 444489999999999 999999999999999 9997531
Q ss_pred ----------CeEEEEeecccCceeEEEEccCCCEEEEEeC
Q 016187 351 ----------GDCVRTFSGHRDAIQAISVSAHQDFLVSVSL 381 (394)
Q Consensus 351 ----------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~ 381 (394)
+..+..+.+ ...|.+++|+|||+.+|+++.
T Consensus 311 d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 311 EKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp HHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred CCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 111222222 445899999999999998874
No 100
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-39 Score=296.03 Aligned_cols=250 Identities=21% Similarity=0.338 Sum_probs=218.1
Q ss_pred eeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCceEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeE
Q 016187 98 DWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS--SGNLKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTV 173 (394)
Q Consensus 98 ~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i 173 (394)
+++..+.+|.+.|++++|+|++++|++|+.|+.|++|++. +++....+.+|.+.|.+++|+|+ +.+|++++.|+.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 4567789999999999999999999999999999999997 55667788899999999999987 8999999999999
Q ss_pred EEEeCCccc--eeeeecccCcCeEEEEECCC--CCeEEEEeCCCcEEEEcCCCCceE--EEEcCCCCcccCeEEEEEcC-
Q 016187 174 WMWNADRAA--YLNMFSGHGSSVTCGDFTPD--GKTICTGSDDATLRVWNPKSGENI--HVIRGHPYHTEGLTCLTISA- 246 (394)
Q Consensus 174 ~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~i~~~~~~~- 246 (394)
++|++.+++ .+..+.+|...|.+++|+|+ +++|++++.|+.|++||+.++... ..+.. |...+.++.|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~---~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA---HAIGVNSASWAPA 158 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC---CTTCEEEEEECCC
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC---CCCceEEEEEcCc
Confidence 999998876 67778889999999999999 999999999999999999887432 23332 567899999999
Q ss_pred ------------CCCEEEEEeCCCcEEEEECCCCc----EEEEeccCCCCEEEEEECCC---CCeEEEEeCCCcEEEEeC
Q 016187 247 ------------DSTLALSGSKDGSVHMVNITTGK----VVSSLVSHTDSIECIGFSRS---SPWAATGSMDQKLIIWDL 307 (394)
Q Consensus 247 ------------~~~~l~~g~~dg~i~i~d~~~~~----~~~~~~~h~~~i~~v~~~~~---~~~l~s~s~dg~i~iwd~ 307 (394)
++.++++++.|+.|++||+++++ .+..+..|...|.+++|+|+ +.+|++++.||.|++||+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 69999999999999999998764 55678889999999999999 899999999999999999
Q ss_pred CCCCc---c---eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Q 016187 308 QHSLP---R---STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS 350 (394)
Q Consensus 308 ~~~~~---~---~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~ 350 (394)
..... . ....|...|.+++|+|++++|++++.||.|++|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 76521 1 1223778899999999999999999999999999763
No 101
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.8e-39 Score=301.10 Aligned_cols=284 Identities=18% Similarity=0.307 Sum_probs=241.0
Q ss_pred EEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe----eeEeecCcccCEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCC--
Q 016187 67 VYSVACSPTDATLVATGGGDDKGFFWRINQGD----WASEIQGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDPSSG-- 139 (394)
Q Consensus 67 v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~----~~~~~~~h~~~V~~v~~s~-~g~~l~t~s~d~~i~vwd~~~~-- 139 (394)
...++++|....++++|+.|+.|+||++.... ....+.+|.+.|++++|+| ++++|++|+.|++|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 34578898766677788999999999986542 3456789999999999999 9999999999999999999987
Q ss_pred -----ceEEEEecCCCCEEEEEEcCCC-CEEEEecCCCeEEEEeCCccceeeee--cccCcCeEEEEECCCCCeEEEEeC
Q 016187 140 -----NLKCTLEGPGGGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMF--SGHGSSVTCGDFTPDGKTICTGSD 211 (394)
Q Consensus 140 -----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d~~i~iw~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~~~ 211 (394)
+....+.+|...|.+++|+|++ ++|++++.|+.|++||+.+++.+..+ .+|...|.+++|+|++++|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 5677889999999999999998 69999999999999999999888888 889999999999999999999999
Q ss_pred CCcEEEEcCCCCceEEEE-cCCCCcccCeEEEEEcCCCCEEEEE---eCCCcEEEEECCCCcE-EEE-eccCCCCEEEEE
Q 016187 212 DATLRVWNPKSGENIHVI-RGHPYHTEGLTCLTISADSTLALSG---SKDGSVHMVNITTGKV-VSS-LVSHTDSIECIG 285 (394)
Q Consensus 212 dg~i~vwd~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~g---~~dg~i~i~d~~~~~~-~~~-~~~h~~~i~~v~ 285 (394)
||.|++||+++++.+..+ ..+. ...+.++.|+|++.++++| +.|+.|++||+++++. +.. ...|...+.+++
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHE--GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSC--SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCC--CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 999999999999888777 4432 2237889999999999999 7999999999988653 222 235778899999
Q ss_pred ECCCCCeEE-EEeCCCcEEEEeCCCCCc--cee--ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE
Q 016187 286 FSRSSPWAA-TGSMDQKLIIWDLQHSLP--RST--CDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV 354 (394)
Q Consensus 286 ~~~~~~~l~-s~s~dg~i~iwd~~~~~~--~~~--~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 354 (394)
|+|++.+|+ +++.|+.|++||+..... ... ..|...+.+++|+|++.++++ .++.+++|++.++++.
T Consensus 275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCE 346 (402)
T ss_dssp EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEE
T ss_pred EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEE
Confidence 999999986 455799999999987652 222 235688999999999998875 5679999998887653
No 102
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.2e-37 Score=290.76 Aligned_cols=324 Identities=15% Similarity=0.123 Sum_probs=263.5
Q ss_pred cCCcEEEEE---EcCCCCcEEE-------------EecCCC--eEEEEEcCCC--eeeEeecCcccCEEEEEEcCCCCEE
Q 016187 63 HSDEVYSVA---CSPTDATLVA-------------TGGGDD--KGFFWRINQG--DWASEIQGHKDSVSSLAFSMDGQLL 122 (394)
Q Consensus 63 h~~~v~~~~---~~p~~~~~la-------------sg~~d~--~v~~w~~~~~--~~~~~~~~h~~~V~~v~~s~~g~~l 122 (394)
....++.++ |+|.+..++. +++.++ .++.|+..++ +.+..+..+. .+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEE
Confidence 344566677 7775443332 223334 3444444334 5555666554 45699999977788
Q ss_pred EEEeCCCcEEEEeCCCCceEEE-----EecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEE
Q 016187 123 ASGGLDGLVQIWDPSSGNLKCT-----LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCG 197 (394)
Q Consensus 123 ~t~s~d~~i~vwd~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~ 197 (394)
++++.++.|++||+.+++.... +.+|.+.+.+++|+|++.++++++.|+.|++|++.+++.+..+..|...+.++
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~ 217 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKIL 217 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEE
Confidence 8888899999999999988763 34678899999999999999999999999999999988888888899999999
Q ss_pred EECCCCCeEE-EEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe--------CCCcEEEEECCCC
Q 016187 198 DFTPDGKTIC-TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS--------KDGSVHMVNITTG 268 (394)
Q Consensus 198 ~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~--------~dg~i~i~d~~~~ 268 (394)
+|+|++++++ +++.|+.|++||+++++.+..+.. ...+.+++++|+++++++++ .|+.|++||+.++
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK----IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC----CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC----CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 9999999885 555899999999999887766553 23488999999999998887 5889999999999
Q ss_pred cEEEEeccCCCCEEEEEECCCCCe-EEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeC--------
Q 016187 269 KVVSSLVSHTDSIECIGFSRSSPW-AATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCV-------- 339 (394)
Q Consensus 269 ~~~~~~~~h~~~i~~v~~~~~~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~-------- 339 (394)
+.+..+ .|...+.+++|+|++++ +++++.++.|++||+.+........+...+.+++|+|++++|++++.
T Consensus 294 ~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 294 KLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp EEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred cEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 877665 45668899999999975 56678999999999987766666667788999999999999988876
Q ss_pred -------CCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeC-CCcEEEEeccCC
Q 016187 340 -------DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSL-DGTARVFEIADF 393 (394)
Q Consensus 340 -------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~-dg~i~iw~~~~~ 393 (394)
||.|++||..+++.+..+..+ ..+.+++|+|++++|++++. |+.|++|+++.|
T Consensus 373 ~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~~ 433 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDGF 433 (433)
T ss_dssp TTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEETTC
T ss_pred cccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEecCC
Confidence 579999999999999988874 57899999999999998875 999999999865
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-38 Score=290.28 Aligned_cols=253 Identities=19% Similarity=0.271 Sum_probs=218.7
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcC--CCeeeEeecCcccCEEEEEEcCC--CCEEEEEeCCCcE
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGLV 131 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~--~~~~~~~~~~h~~~V~~v~~s~~--g~~l~t~s~d~~i 131 (394)
...++.+|.+.|++++|+|+ +.+||+|+.|+.|++|++. +.+.+..+.+|...|++++|+|+ +++|++|+.|+.|
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp --CCEEECCCCEEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccEEecCCcccEEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 45678999999999999995 6689999999999999998 55677889999999999999987 9999999999999
Q ss_pred EEEeCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEEEeCCccc--eeeeecccCcCeEEEEECC----
Q 016187 132 QIWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTP---- 201 (394)
Q Consensus 132 ~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~---- 201 (394)
++||+.+++ ....+..|...|.+++|+|+ +.++++++.|+.|++|++.... ....+.+|...|.+++|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999999987 66677889999999999999 8999999999999999998763 3445678999999999999
Q ss_pred ---------CCCeEEEEeCCCcEEEEcCCCCceEEE-EcCCCCcccCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCC
Q 016187 202 ---------DGKTICTGSDDATLRVWNPKSGENIHV-IRGHPYHTEGLTCLTISAD---STLALSGSKDGSVHMVNITTG 268 (394)
Q Consensus 202 ---------~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~---~~~l~~g~~dg~i~i~d~~~~ 268 (394)
++++|++++.||.|++||+++++.... ......|...+.+++|+|+ +.++++++.||.|++||+.++
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 699999999999999999987653321 1122236778999999999 899999999999999999886
Q ss_pred c---EEE--EeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCC
Q 016187 269 K---VVS--SLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 269 ~---~~~--~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~ 309 (394)
. ... ....|...|.+++|+|++.+|++++.||.|++|++..
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 242 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 4 222 2334888999999999999999999999999999864
No 104
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-38 Score=297.02 Aligned_cols=280 Identities=18% Similarity=0.273 Sum_probs=237.9
Q ss_pred EEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCc----eEEEEecCCCCEEEEEEcC-CCCEEEEecCCCeEEEEeCCcc--
Q 016187 110 VSSLAFSMDGQL-LASGGLDGLVQIWDPSSGN----LKCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRA-- 181 (394)
Q Consensus 110 V~~v~~s~~g~~-l~t~s~d~~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d~~i~iw~~~~~-- 181 (394)
...++++|+... +++++.||.|+||++.... ....+.+|.+.|.+++|+| ++.+|++|+.|+.|++|++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 345888988754 4467899999999986542 3345678999999999999 8999999999999999999876
Q ss_pred -----ceeeeecccCcCeEEEEECCCC-CeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe
Q 016187 182 -----AYLNMFSGHGSSVTCGDFTPDG-KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS 255 (394)
Q Consensus 182 -----~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~ 255 (394)
..+..+.+|...|.+++|+|++ ++|++++.||+|++||+.+++.+..+.. ..|...+.+++|+|++.++++++
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-DVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-TTCCSCEEEEEECTTSSCEEEEE
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-CCCCCceEEEEECCCCCEEEEEe
Confidence 5677888999999999999998 6999999999999999999988877721 12567899999999999999999
Q ss_pred CCCcEEEEECCCCcEEEEe-ccCCCC-EEEEEECCCCCeEEEE---eCCCcEEEEeCCCCCc---ceeccCCCCEEEEEE
Q 016187 256 KDGSVHMVNITTGKVVSSL-VSHTDS-IECIGFSRSSPWAATG---SMDQKLIIWDLQHSLP---RSTCDHEDGVTCLMW 327 (394)
Q Consensus 256 ~dg~i~i~d~~~~~~~~~~-~~h~~~-i~~v~~~~~~~~l~s~---s~dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~ 327 (394)
.|+.|++||+++++.+..+ ..|... +.++.|+|++.+|+++ +.|+.|++||++.... .....+...+.+++|
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 9999999999999999888 788776 8999999999999999 7999999999986533 233457788999999
Q ss_pred eCCCCEEE-EEeCCCeEEEEECCCCeE-EEEeec--ccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 328 LGTSKYVV-TGCVDGKVRVWDSLSGDC-VRTFSG--HRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 328 ~~~~~~l~-sg~~dg~i~iwd~~~~~~-~~~~~~--h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
+|++++|+ +|+.||.|++|++.+++. +..+.. |..+|.+++|+|++.++++ .++.+++|++..
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 99999986 555799999999998874 555554 4589999999999998864 567999999864
No 105
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.7e-36 Score=280.93 Aligned_cols=308 Identities=15% Similarity=0.141 Sum_probs=255.0
Q ss_pred CcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceEEEEecCCCCEEEE
Q 016187 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWV 155 (394)
Q Consensus 77 ~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l-~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~ 155 (394)
..++++++.|+.|++||+.+++.+..+.+|. .+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..+. .+.++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 3578999999999999999999999888775 48999999999977 677799999999999999888877655 89999
Q ss_pred EEcCCCCEE-EEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeE-EEEeCCCcEEEEcCCCCceEEEEcCCC
Q 016187 156 SWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI-CTGSDDATLRVWNPKSGENIHVIRGHP 233 (394)
Q Consensus 156 ~~~~~~~~l-~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~ 233 (394)
+|+|+++++ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++| ++++.++.|++||+.+++.+..+..+
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~- 157 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG- 157 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-
Confidence 999999977 45667799999999998887777654 467899999999977 68888999999999999887776642
Q ss_pred CcccCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEe---CCCcEEEEeCCC
Q 016187 234 YHTEGLTCLTISADSTLA-LSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGS---MDQKLIIWDLQH 309 (394)
Q Consensus 234 ~~~~~i~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s---~dg~i~iwd~~~ 309 (394)
..+.+++++|+++.+ ++++.++.|++||+++++.+..+. +...+.+++|+|++.++++++ .++.|++||+.+
T Consensus 158 ---~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 158 ---RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp ---SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred ---CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 457899999999877 677889999999999998877665 566889999999999998887 689999999987
Q ss_pred CCcceeccCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCeEEEEeecccCcee---EEE------------EccCC
Q 016187 310 SLPRSTCDHEDGVTCLMWLGTSKYV-VTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQ---AIS------------VSAHQ 373 (394)
Q Consensus 310 ~~~~~~~~~~~~v~~~~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~---~l~------------~~~~~ 373 (394)
............+.+++|+|++++| ++++.|+.|++||+.+++.+..+..|..+.. .+. |+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~ 313 (391)
T 1l0q_A 234 NKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNI 313 (391)
T ss_dssp TEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESC
T ss_pred CeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccccccccc
Confidence 6555555445568899999999987 6778899999999999999999887765431 122 22221
Q ss_pred ----------CEEEEEeCCCcEEEEeccC
Q 016187 374 ----------DFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 374 ----------~~l~s~s~dg~i~iw~~~~ 392 (394)
-.+.+.+.|.++++|++.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 342 (391)
T 1l0q_A 314 TSGYIFLSEPVQFTDLSKDATEWKWDFGD 342 (391)
T ss_dssp CSSEEETTCCEEEEECCBSCSEEEEECSS
T ss_pred ccccccccceEEEEeCCCCceEEEEECCC
Confidence 2466677899999999864
No 106
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-39 Score=304.12 Aligned_cols=279 Identities=16% Similarity=0.280 Sum_probs=229.3
Q ss_pred EcCCCCcEEEEecCCCeEEEEEcCCCeeeEee-cCcccCEEEEEEcC-CCCEEEEEeCCCcEEEEeCCC---Cc---eEE
Q 016187 72 CSPTDATLVATGGGDDKGFFWRINQGDWASEI-QGHKDSVSSLAFSM-DGQLLASGGLDGLVQIWDPSS---GN---LKC 143 (394)
Q Consensus 72 ~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~-~~h~~~V~~v~~s~-~g~~l~t~s~d~~i~vwd~~~---~~---~~~ 143 (394)
|+|. +..+++++ .|+ .+++.+..+ .+|.+.|++++|+| ++++|++|+.|++|+|||+.+ +. ...
T Consensus 35 f~~~-~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 106 (437)
T 3gre_A 35 FGPI-QEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL 106 (437)
T ss_dssp GCCC-CCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE
T ss_pred cCCc-cccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee
Confidence 5564 34455443 487 456778888 89999999999999 999999999999999999876 33 233
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCC---ccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcC
Q 016187 144 TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD---RAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNP 220 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~ 220 (394)
.+ .|.+.|.+++|+|++++|++++.|+.|++|++. .++....+.+| .+..+.|+|++
T Consensus 107 ~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~----------------- 166 (437)
T 3gre_A 107 TY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE--CIRKINLKNFG----------------- 166 (437)
T ss_dssp EE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE--EEEEEEGGGGS-----------------
T ss_pred ec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc--eeEEEEccCcc-----------------
Confidence 33 488999999999999999999999999999985 55555555555 56666666643
Q ss_pred CCCceEEEEcCCCCcccCeEEEE--EcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc--CCCCEEEEEECCCCCeEEEE
Q 016187 221 KSGENIHVIRGHPYHTEGLTCLT--ISADSTLALSGSKDGSVHMVNITTGKVVSSLVS--HTDSIECIGFSRSSPWAATG 296 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--h~~~i~~v~~~~~~~~l~s~ 296 (394)
+...+.++. +++++.++++|+.|+.|++||+++++.+..+.. |...|.+++|+|++.+|+++
T Consensus 167 --------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 232 (437)
T 3gre_A 167 --------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILG 232 (437)
T ss_dssp --------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEE
T ss_pred --------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEE
Confidence 112344444 678999999999999999999999999999988 89999999999999999999
Q ss_pred eCCCcEEEEeCCCCCcceec--cCCCCEEEEEEeC----CCCEEEEEeCCCeEEEEECCCCeEEEEeec-----------
Q 016187 297 SMDQKLIIWDLQHSLPRSTC--DHEDGVTCLMWLG----TSKYVVTGCVDGKVRVWDSLSGDCVRTFSG----------- 359 (394)
Q Consensus 297 s~dg~i~iwd~~~~~~~~~~--~~~~~v~~~~~~~----~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~----------- 359 (394)
+.||+|++||++........ .|...|.+++|+| ++.+|++|+.||.|++||+.+++++..+.+
T Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 312 (437)
T 3gre_A 233 TTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFL 312 (437)
T ss_dssp ETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGS
T ss_pred cCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceec
Confidence 99999999999876554432 6777899996664 577999999999999999999999888875
Q ss_pred ---------------ccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 360 ---------------HRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 360 ---------------h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
|...|++++|+ ++++|++|+.||.|++|++.+.
T Consensus 313 ~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 313 PIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp CBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred ccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 44568889998 7799999999999999998753
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.4e-37 Score=284.82 Aligned_cols=287 Identities=12% Similarity=0.097 Sum_probs=215.8
Q ss_pred EEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEE-EEecC
Q 016187 91 FWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIV-LAGSE 169 (394)
Q Consensus 91 ~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s~ 169 (394)
+|++.+.+.+..+.+|...|++++|+|||++|++|+.++ +++|++.+++....... ..+..+++.++++.+ ++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC
Confidence 567777777777899999999999999999999998775 78999988766554432 247788899988876 67888
Q ss_pred CCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCC-ceEEEEcCCCCcccCeEEEEEcCCC
Q 016187 170 DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG-ENIHVIRGHPYHTEGLTCLTISADS 248 (394)
Q Consensus 170 d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 248 (394)
|++|++||..+++.+..+. +...|.+++|+++. ++.+ .|+.|++||+.++ +.+..+.. ....+++++
T Consensus 80 d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~------~~~~~~~s~-- 147 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR------FGGVCEFSN-- 147 (355)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE------EEEEEEEET--
T ss_pred ccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc------CCceEEEEc--
Confidence 8999999999998888776 66789999998764 3333 4789999999887 54433322 233456666
Q ss_pred CEEEE--EeCCCcEEEEECCCCc---------------E-EEEeccCCCCEEEEEECCCCCeEEEEeCCCc-EEEEeCCC
Q 016187 249 TLALS--GSKDGSVHMVNITTGK---------------V-VSSLVSHTDSIECIGFSRSSPWAATGSMDQK-LIIWDLQH 309 (394)
Q Consensus 249 ~~l~~--g~~dg~i~i~d~~~~~---------------~-~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~-i~iwd~~~ 309 (394)
.++++ |+.||.|++||+.+++ + +..+.+|..+|.+++|+|++.+||+++.|++ |++||+++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 55555 6899999999999865 1 6778899999999999999999999999998 99999987
Q ss_pred CCcceec--c-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE--EEee---------------------cccCc
Q 016187 310 SLPRSTC--D-HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV--RTFS---------------------GHRDA 363 (394)
Q Consensus 310 ~~~~~~~--~-~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~--~~~~---------------------~h~~~ 363 (394)
....... + |...|.+++|+|++++|++|+.|++|++||+..+... ..+. .+...
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVR 307 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCC
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCC
Confidence 7655544 3 8899999999999999999999999999998765321 1111 11223
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 364 IQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 364 v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
...++|++++++|++++.||.+++|++..
T Consensus 308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 308 GCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp CCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 46799999999999999999999998753
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-37 Score=290.46 Aligned_cols=282 Identities=12% Similarity=0.089 Sum_probs=232.6
Q ss_pred ccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---eEEEEecC-----------------------------------
Q 016187 107 KDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN---LKCTLEGP----------------------------------- 148 (394)
Q Consensus 107 ~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~---~~~~~~~~----------------------------------- 148 (394)
..++.+++|+|+|++|+++ .++.|++||+.+|+ .+..+..+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999977665 57899999999998 55555432
Q ss_pred -------------------CCCEEEEEEcCCCCEE-EEecCCCeEEEEeCC--ccceeeeec--ccCcCeEEEEECCCCC
Q 016187 149 -------------------GGGVEWVSWHPRGHIV-LAGSEDSTVWMWNAD--RAAYLNMFS--GHGSSVTCGDFTPDGK 204 (394)
Q Consensus 149 -------------------~~~v~~~~~~~~~~~l-~~~s~d~~i~iw~~~--~~~~~~~~~--~h~~~v~~~~~~~~~~ 204 (394)
.+.|.+++|+|++++| ++++.|+.|++|++. +++.+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 2369999999999986 899999999999998 777777776 5678999999999999
Q ss_pred eEEEEeCCCcEEEEcCCCCceEE-EEcCCCCcccCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCcEEEE-eccCCC
Q 016187 205 TICTGSDDATLRVWNPKSGENIH-VIRGHPYHTEGLTCLTISAD---STLALSGSKDGSVHMVNITTGKVVSS-LVSHTD 279 (394)
Q Consensus 205 ~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~i~~~~~~~~---~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~h~~ 279 (394)
+|++|+.+|.|++|++.+++... .......|...|++++|+|+ ++++++|+.|++|++||+.+++.+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998776432 11112235678999999999 99999999999999999999988877 568999
Q ss_pred CEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec--------------------------cCCCCEEEEEEeCCCCE
Q 016187 280 SIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC--------------------------DHEDGVTCLMWLGTSKY 333 (394)
Q Consensus 280 ~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~--------------------------~~~~~v~~~~~~~~~~~ 333 (394)
.|.+++|+ ++.+|++++.|++|++||+.+....... .....|.+++|+|++++
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 99999999 9999999999999999999876533222 12356899999999999
Q ss_pred EEEEe-CCCeEEEEEC--CCC---eEEEEeecccCceeEEEEccCCCEEEEEeC------CCcEEEEecc
Q 016187 334 VVTGC-VDGKVRVWDS--LSG---DCVRTFSGHRDAIQAISVSAHQDFLVSVSL------DGTARVFEIA 391 (394)
Q Consensus 334 l~sg~-~dg~i~iwd~--~~~---~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~------dg~i~iw~~~ 391 (394)
|++++ .++.|++|++ .++ +.+..+.+| +.|.+++|+|++.+++.++. +..|++|.+.
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 99999 8999999999 666 777888888 78999999996444444343 5668999865
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-38 Score=295.91 Aligned_cols=264 Identities=13% Similarity=0.113 Sum_probs=217.6
Q ss_pred CcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcccee
Q 016187 105 GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYL 184 (394)
Q Consensus 105 ~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~ 184 (394)
.-...|.+++|||||+++||++.|++|+ |...++. +.+|...|..++|+|+| .++.+.+|+.+....
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~---l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~- 79 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD---INCNSKNLFHVKEFPLE-------FENKLDFELAQQNGL- 79 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC---CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCS-
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccce---ecCCCccEEEEEECCCC-------CcceEEEEeCCCceE-
Confidence 3457899999999999999999999999 7555543 47899999999999998 456655665443322
Q ss_pred eeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCC--cccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 016187 185 NMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY--HTEGLTCLTISADSTLALSGSKDGSVHM 262 (394)
Q Consensus 185 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~g~~dg~i~i 262 (394)
..+ +|...|.+++|+|+|++||+++.||.|++||... .+..+. +.. ....+.+++|+|+|++|++|+.||+|++
T Consensus 80 ~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 80 LNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp STT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred eec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 222 5688899999999999999999999999999543 444444 321 1346999999999999999999999999
Q ss_pred EECCCCc-------EEEEe----ccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcc----ee-ccCCCCEEEEE
Q 016187 263 VNITTGK-------VVSSL----VSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPR----ST-CDHEDGVTCLM 326 (394)
Q Consensus 263 ~d~~~~~-------~~~~~----~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~----~~-~~~~~~v~~~~ 326 (394)
||+.+++ .+.++ .+|..+|.+++|+|++ +++++.|+++++||+...... .. ..|...|.+++
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 9999885 36676 6678899999999999 888899999999999876532 12 36778899999
Q ss_pred EeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEE--ccCCCEEEEEeCCCcEEEEecc
Q 016187 327 WLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISV--SAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 327 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
|+ +++||+++ ++.|++||+.+++......+|...|..++| +|++..+++++.||+ ++|.++
T Consensus 234 Fs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 234 IV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99 58999987 699999999988875444489999999999 999999999999999 999864
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.7e-37 Score=290.31 Aligned_cols=250 Identities=20% Similarity=0.351 Sum_probs=220.6
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCC----------CeeeEeecCcccCEEEEEEcCCCC-EEEEE
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----------GDWASEIQGHKDSVSSLAFSMDGQ-LLASG 125 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~----------~~~~~~~~~h~~~V~~v~~s~~g~-~l~t~ 125 (394)
.....+|.+.|++++|+|+++.+||+|+.|+.|++|++.. .+....+.+|...|++++|+|++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 4556789999999999997678999999999999999976 567778899999999999999998 99999
Q ss_pred eCCCcEEEEeCCCCce-------EEEEecCCCCEEEEEEcC-CCCEEEEecCCCeEEEEeCCcc---ceeeeecccCcCe
Q 016187 126 GLDGLVQIWDPSSGNL-------KCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRA---AYLNMFSGHGSSV 194 (394)
Q Consensus 126 s~d~~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d~~i~iw~~~~~---~~~~~~~~h~~~v 194 (394)
+.||+|++|++.++.. ...+..|...|.+++|+| ++.++++++.|+.|++||+++. +.+..+..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987422 356678899999999999 6789999999999999999876 5666778999999
Q ss_pred EEEEECCCCC-eEEEEeCCCcEEEEcCCC-CceEEEEcCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCC----
Q 016187 195 TCGDFTPDGK-TICTGSDDATLRVWNPKS-GENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITT---- 267 (394)
Q Consensus 195 ~~~~~~~~~~-~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~dg~i~i~d~~~---- 267 (394)
++++|+|+++ +|++|+.||.|++||+++ .+.+..+.. |...++++.|+|++. ++++++.|+.|++||+..
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 9999999887 688999999999999987 445666654 567899999999985 789999999999999986
Q ss_pred ----------CcEEEEeccCCCCEEEEEECCCCC-eEEEEeCCCcEEEEeCCC
Q 016187 268 ----------GKVVSSLVSHTDSIECIGFSRSSP-WAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 268 ----------~~~~~~~~~h~~~i~~v~~~~~~~-~l~s~s~dg~i~iwd~~~ 309 (394)
.+.+..+.+|...|.+++|+|+++ ++++++.||.|++|++..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 367788889999999999999999 899999999999999864
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-37 Score=282.56 Aligned_cols=269 Identities=12% Similarity=0.088 Sum_probs=216.0
Q ss_pred CCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEE
Q 016187 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWV 155 (394)
Q Consensus 76 ~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~ 155 (394)
++.+|+||+.|++|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+...
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~----------------- 104 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN----------------- 104 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT-----------------
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC-----------------
Confidence 45688999999999999998888877776 567888888887 88999999999998653
Q ss_pred EEcCCCCEEEEecCCCeEEEEeCCccceeeeec-ccCcCeEEEEECC--CCCeEEEEeCCCcEEEEcCCCCceEEEEcCC
Q 016187 156 SWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTP--DGKTICTGSDDATLRVWNPKSGENIHVIRGH 232 (394)
Q Consensus 156 ~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 232 (394)
.+.+|+..+++.++.+. +|..+|.+++|+| ++++|++++.||+|++||+++++.......+
T Consensus 105 ----------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 168 (343)
T 3lrv_A 105 ----------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK 168 (343)
T ss_dssp ----------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC
T ss_pred ----------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC
Confidence 34567777666554443 6778999999999 9999999999999999999999886555432
Q ss_pred CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE-EEecc-CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC
Q 016187 233 PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVV-SSLVS-HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHS 310 (394)
Q Consensus 233 ~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~-~~~~~-h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~ 310 (394)
+...+++++|+|++.++++|+.||.|++||+++++.+ ..+.. |..+|.+++|+|++.+|++++ |++|++||+++.
T Consensus 169 --~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 169 --SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp --SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSS
T ss_pred --CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC
Confidence 4456999999999999999999999999999999877 77887 999999999999999999999 559999999876
Q ss_pred Ccceecc----CCCCE--EEEEEeCCCCEEEEEeC-CCeEEEEECCCCeEEEEeecccCceeEEEEcc---CCCEEEEEe
Q 016187 311 LPRSTCD----HEDGV--TCLMWLGTSKYVVTGCV-DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSA---HQDFLVSVS 380 (394)
Q Consensus 311 ~~~~~~~----~~~~v--~~~~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~---~~~~l~s~s 380 (394)
....... |...+ .+++|+|++++|++++. |+.|++|+.......... .++..+.|++ +.+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~ 321 (343)
T 3lrv_A 246 VGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVC 321 (343)
T ss_dssp TTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEE
T ss_pred CcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEe
Confidence 4432211 22333 46999999999999998 999999998655433222 4677888888 888899999
Q ss_pred CCCcEEEEe
Q 016187 381 LDGTARVFE 389 (394)
Q Consensus 381 ~dg~i~iw~ 389 (394)
.||.++++-
T Consensus 322 ~d~~~~~~~ 330 (343)
T 3lrv_A 322 GDGGIAAIL 330 (343)
T ss_dssp ETTEEEEEE
T ss_pred cCCceEEEE
Confidence 999888774
No 112
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-38 Score=293.39 Aligned_cols=242 Identities=13% Similarity=0.106 Sum_probs=204.0
Q ss_pred ecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc--ceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCC
Q 016187 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA--AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG 223 (394)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 223 (394)
..+.++|++++|+|++++|++|+.|+.|++|++.++ +.+..+.+|...|.+++|+|++++|++++.|++|++||+.++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 445678999999999999999999999999999887 677888999999999999999999999999999999999887
Q ss_pred c---eEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc---EEEEecc-CCCCEEEEEECCCCCeEEEE
Q 016187 224 E---NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK---VVSSLVS-HTDSIECIGFSRSSPWAATG 296 (394)
Q Consensus 224 ~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~---~~~~~~~-h~~~i~~v~~~~~~~~l~s~ 296 (394)
+ ....+.. |...+.+++|+|+++++++++.|+.|++||+.+++ ....+.. |...|.+++|+|++.+|+++
T Consensus 88 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 88 GTWKQTLVLLR---LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp -CCCCEEECCC---CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CceeeeeEecc---cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 6 3333333 67789999999999999999999999999999887 3677777 99999999999999999999
Q ss_pred eCCCcEEEEeCCCC------------------CcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeE----E
Q 016187 297 SMDQKLIIWDLQHS------------------LPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDC----V 354 (394)
Q Consensus 297 s~dg~i~iwd~~~~------------------~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~----~ 354 (394)
+.|++|++||+... .......|...|.+++|+|++++|++|+.||.|++||+.++++ +
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 99999999998521 1112227888999999999999999999999999999999987 7
Q ss_pred EEeecccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 355 RTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 355 ~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
..+.+|..+|.+++|+|++++|++++.++.+ +|+..
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 8899999999999999999999999877766 66543
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-38 Score=314.34 Aligned_cols=250 Identities=19% Similarity=0.287 Sum_probs=215.3
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcC--CCeeeEeecCcccCEEEEEEcCC--CCEEEEEeCCCcEE
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFSMD--GQLLASGGLDGLVQ 132 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~--~~~~~~~~~~h~~~V~~v~~s~~--g~~l~t~s~d~~i~ 132 (394)
..++.+|.+.|++++|+|+ +.+|++|+.|++|++|++. +++....+.+|.++|++++|+|+ +++|++|+.||+|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~d-g~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp ------CCCCEEEECCCSS-SCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eeecccCcceeEEEEECCC-CCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 3568899999999999996 5678999999999999998 55677889999999999999998 99999999999999
Q ss_pred EEeCCCCc--eEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEEEeCCcc--ceeeeecccCcCeEEEEECC-----
Q 016187 133 IWDPSSGN--LKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWMWNADRA--AYLNMFSGHGSSVTCGDFTP----- 201 (394)
Q Consensus 133 vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~----- 201 (394)
+||+.+++ ....+..|...|.+++|+|+ ++++++|+.|+.|++||+.+. .....+.+|...|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99999887 56677889999999999999 999999999999999999876 33455678999999999999
Q ss_pred --------CCCeEEEEeCCCcEEEEcCCCCce----EEEEcCCCCcccCeEEEEEcCC---CCEEEEEeCCCcEEEEECC
Q 016187 202 --------DGKTICTGSDDATLRVWNPKSGEN----IHVIRGHPYHTEGLTCLTISAD---STLALSGSKDGSVHMVNIT 266 (394)
Q Consensus 202 --------~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~~~~i~~~~~~~~---~~~l~~g~~dg~i~i~d~~ 266 (394)
++++|++|+.||+|++||++++.. ...+. .|...|++++|+|+ +.++++|+.||.|++||+.
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~---~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec---CCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 589999999999999999987743 33333 36778999999999 8999999999999999998
Q ss_pred CCc-----EEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC
Q 016187 267 TGK-----VVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHS 310 (394)
Q Consensus 267 ~~~-----~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~ 310 (394)
+++ .+.....|...|.+++|+|++.++++++.||.|++|++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 864 23334458889999999999999999999999999998753
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.8e-37 Score=287.90 Aligned_cols=258 Identities=10% Similarity=0.038 Sum_probs=186.8
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceEE-----EEecCCCCEEEEEEcC--------CCCEEEEecCCCeEEEEeC
Q 016187 112 SLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC-----TLEGPGGGVEWVSWHP--------RGHIVLAGSEDSTVWMWNA 178 (394)
Q Consensus 112 ~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~l~~~s~d~~i~iw~~ 178 (394)
...+++++.+|++|+.|++|+|||..+++... .+.+|.+.|++++|+| ++++|++|+.|++|++||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 33444566789999999999999998886532 3568999999999998 7889999999999999999
Q ss_pred CccceeeeecccCcCeEEEEECCCCC-eEEEEeCCCcEEEEcCCCCceEEEEcC----------------------CCCc
Q 016187 179 DRAAYLNMFSGHGSSVTCGDFTPDGK-TICTGSDDATLRVWNPKSGENIHVIRG----------------------HPYH 235 (394)
Q Consensus 179 ~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~vwd~~~~~~~~~~~~----------------------~~~~ 235 (394)
.++..+..+.+|..++.+++|+|++. +|++|+.|++|++||+++++....... ...|
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 88877777888999999999999874 799999999999999988765432211 1124
Q ss_pred ccCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce
Q 016187 236 TEGLTCLTIS-ADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS 314 (394)
Q Consensus 236 ~~~i~~~~~~-~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 314 (394)
...+.++.++ |+++.+++++.|+++++||+..++....+..|...+..+.+.|+...+...
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------------ 315 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF------------------ 315 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS------------------
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc------------------
Confidence 4567778876 799999999999999999999998888888888888887777764322111
Q ss_pred eccCCCCEEEEEEeC--CCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 315 TCDHEDGVTCLMWLG--TSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 315 ~~~~~~~v~~~~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
...+.+ .|++ ++.++++|+.||.|++||+.+++++..+.+|..+|++|+|+|||++||+++.+| +.+|++..
T Consensus 316 ----~~~~~~-~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 316 ----PSLLGA-CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp ----CCSSCC-EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred ----CcceeE-EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 111112 2333 445778889999999999999999999999999999999999999999999776 66676654
Q ss_pred C
Q 016187 393 F 393 (394)
Q Consensus 393 ~ 393 (394)
|
T Consensus 390 f 390 (393)
T 4gq1_A 390 F 390 (393)
T ss_dssp G
T ss_pred c
Confidence 4
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.1e-36 Score=273.02 Aligned_cols=277 Identities=10% Similarity=0.103 Sum_probs=215.9
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEE-EEEeCCCcEEEEe
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWD 135 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l-~t~s~d~~i~vwd 135 (394)
...+.+|.+.|++++|+|+ +.+||+|+.+ .+++|+...++...... ...+..+++.++++.+ ++++.|++|++||
T Consensus 12 ~~~~~~h~~~V~~v~fs~d-g~~la~g~~~-~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQD-QSCLILSTLK-SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -------CCCCCEEEECTT-SSEEEEECSS-EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccccCCCceEEEEECCC-CCEEEEEcCC-EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 3456789999999999995 5688888766 57899998876655433 2358889999998887 5677889999999
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc-ceeeeecccCcCeEEEEECCCCCeEEE--EeCC
Q 016187 136 PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA-AYLNMFSGHGSSVTCGDFTPDGKTICT--GSDD 212 (394)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s--~~~d 212 (394)
..+++.+..+. +...|.+++|+++. ++++ .++.+++|++.+. +.+..+.. +...+++++ .+++. |+.|
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~ 158 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNL 158 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCT
T ss_pred CCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcC
Confidence 99999988877 55689999999874 3333 4789999999887 66665554 444556777 56665 6899
Q ss_pred CcEEEEcCCCCc----------------eEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCc-EEEEECCCCcEEEEec
Q 016187 213 ATLRVWNPKSGE----------------NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS-VHMVNITTGKVVSSLV 275 (394)
Q Consensus 213 g~i~vwd~~~~~----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~-i~i~d~~~~~~~~~~~ 275 (394)
|.|++||+.+++ .+..+.+ |...|++++|+|+++++++|+.|++ |++||+++++++..+.
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~---h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA---HTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp TCEEEEECCC------------------CCEEECC---CSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEc---cCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 999999998765 1344443 6788999999999999999999999 9999999999999998
Q ss_pred -c-CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce--ec----------------------cCCCCEEEEEEeC
Q 016187 276 -S-HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS--TC----------------------DHEDGVTCLMWLG 329 (394)
Q Consensus 276 -~-h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~--~~----------------------~~~~~v~~~~~~~ 329 (394)
+ |...|.+++|+|++.+|++++.|++|++||+....... .. ........++|++
T Consensus 236 ~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 315 (355)
T 3vu4_A 236 RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS 315 (355)
T ss_dssp CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESS
T ss_pred cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeC
Confidence 5 99999999999999999999999999999986532110 00 0112236789999
Q ss_pred CCCEEEEEeCCCeEEEEECC
Q 016187 330 TSKYVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 330 ~~~~l~sg~~dg~i~iwd~~ 349 (394)
++++|++++.||.+++|++.
T Consensus 316 d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 316 ESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp SSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEEE
Confidence 99999999999999999864
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-36 Score=281.47 Aligned_cols=280 Identities=15% Similarity=0.076 Sum_probs=228.8
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe---eeEeecC------------------------------------
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGD---WASEIQG------------------------------------ 105 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~---~~~~~~~------------------------------------ 105 (394)
.++.+++|+|++. +|+++ .++.|++|++.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~-~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGS-LVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSS-EEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCC-EEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4788999999755 66554 57899999998888 5555443
Q ss_pred ------------------cccCEEEEEEcCCCCEE-EEEeCCCcEEEEeCC--CCceEEEEe--cCCCCEEEEEEcCCCC
Q 016187 106 ------------------HKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPS--SGNLKCTLE--GPGGGVEWVSWHPRGH 162 (394)
Q Consensus 106 ------------------h~~~V~~v~~s~~g~~l-~t~s~d~~i~vwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~ 162 (394)
|.+.|++++|+|+|++| ++++.|+.|++||+. +++.+..+. .+...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 34479999999999996 899999999999998 888877775 5678899999999999
Q ss_pred EEEEecCCCeEEEEeCCccceee----eecccCcCeEEEEECCC---CCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCc
Q 016187 163 IVLAGSEDSTVWMWNADRAAYLN----MFSGHGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGENIHVIRGHPYH 235 (394)
Q Consensus 163 ~l~~~s~d~~i~iw~~~~~~~~~----~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 235 (394)
+|++|+.++.+++|++.+..... .+.+|...|.+++|+|+ +++|++|+.|++|++||+.+++.+..+. ..|
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~--~~h 240 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL--FGH 240 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC--CCC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee--cCC
Confidence 99999999999999998766544 77889999999999999 9999999999999999999988776633 125
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc-------------------------CCCCEEEEEECCCC
Q 016187 236 TEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS-------------------------HTDSIECIGFSRSS 290 (394)
Q Consensus 236 ~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~-------------------------h~~~i~~v~~~~~~ 290 (394)
...|++++|+ ++.++++|+.|++|++||+.+++++..+.. ....|.+++|+|++
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 6789999999 999999999999999999999998887753 23568999999999
Q ss_pred CeEEEEe-CCCcEEEEeC--CCC---CcceeccCCCCEEEEEEeCCCCEEEEEeC------CCeEEEEECC
Q 016187 291 PWAATGS-MDQKLIIWDL--QHS---LPRSTCDHEDGVTCLMWLGTSKYVVTGCV------DGKVRVWDSL 349 (394)
Q Consensus 291 ~~l~s~s-~dg~i~iwd~--~~~---~~~~~~~~~~~v~~~~~~~~~~~l~sg~~------dg~i~iwd~~ 349 (394)
+++++++ .++.|++|++ ... ...........+.+++|+|++.++++++. +..|.+|.+.
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 9999998 8999999999 333 22222222378999999996444444343 4557888643
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.1e-36 Score=282.25 Aligned_cols=246 Identities=21% Similarity=0.334 Sum_probs=213.8
Q ss_pred EEEecCCCCEEEEEEcCC-CCEEEEecCCCeEEEEeCCc----------cceeeeecccCcCeEEEEECCCCC-eEEEEe
Q 016187 143 CTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADR----------AAYLNMFSGHGSSVTCGDFTPDGK-TICTGS 210 (394)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~-~~~l~~~s~d~~i~iw~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 210 (394)
.....|.+.|++++|+|+ +.++++++.+|.|++|++.. ...+..+.+|...+.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344568889999999997 67999999999999999976 566777889999999999999988 999999
Q ss_pred CCCcEEEEcCCCCce-------EEEEcCCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC---cEEEEeccCCC
Q 016187 211 DDATLRVWNPKSGEN-------IHVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITTG---KVVSSLVSHTD 279 (394)
Q Consensus 211 ~dg~i~vwd~~~~~~-------~~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~dg~i~i~d~~~~---~~~~~~~~h~~ 279 (394)
.||+|++||+.++.. ...+. .|...|.+++|+| ++.++++++.|+.|++||++++ +.+..+..|..
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFT---GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEEC---CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred CCCeEEEEeCCCCCCCCceeccceeec---CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 999999999987432 12232 3667899999999 7789999999999999999987 56777788999
Q ss_pred CEEEEEECCCCC-eEEEEeCCCcEEEEeCCCC-C-cceeccCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC-----
Q 016187 280 SIECIGFSRSSP-WAATGSMDQKLIIWDLQHS-L-PRSTCDHEDGVTCLMWLGTSK-YVVTGCVDGKVRVWDSLS----- 350 (394)
Q Consensus 280 ~i~~v~~~~~~~-~l~s~s~dg~i~iwd~~~~-~-~~~~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~iwd~~~----- 350 (394)
.|++++|+|+++ ++++++.||+|++||++.. . ......|...|.++.|+|+++ +|++++.||.|++||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 999999999987 6899999999999999863 2 334456889999999999985 699999999999999876
Q ss_pred ---------CeEEEEeecccCceeEEEEccCCC-EEEEEeCCCcEEEEecc
Q 016187 351 ---------GDCVRTFSGHRDAIQAISVSAHQD-FLVSVSLDGTARVFEIA 391 (394)
Q Consensus 351 ---------~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iw~~~ 391 (394)
.+++..+.+|...|++++|+|+++ +|++++.||.|++|++.
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 367788889999999999999999 99999999999999975
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=304.17 Aligned_cols=248 Identities=21% Similarity=0.329 Sum_probs=215.1
Q ss_pred eEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCceEEEEecCCCCEEEEEEcCC--CCEEEEecCCCeEEE
Q 016187 100 ASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS--SGNLKCTLEGPGGGVEWVSWHPR--GHIVLAGSEDSTVWM 175 (394)
Q Consensus 100 ~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~s~d~~i~i 175 (394)
...+.+|.++|++++|+|+|++|++|+.||+|+|||+. +++....+.+|.++|.+++|+|+ ++++++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 34678999999999999999999999999999999987 45667788899999999999988 899999999999999
Q ss_pred EeCCccc--eeeeecccCcCeEEEEECCC--CCeEEEEeCCCcEEEEcCCCCce--EEEEcCCCCcccCeEEEEEcC---
Q 016187 176 WNADRAA--YLNMFSGHGSSVTCGDFTPD--GKTICTGSDDATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISA--- 246 (394)
Q Consensus 176 w~~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~--- 246 (394)
|++.+++ ....+.+|...|++++|+|+ ++++++|+.||+|++||++++.. ...+.. |...+.++.++|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~---~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA---HAIGVNSASWAPATI 158 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC---CSSCEEEEEECCCC-
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec---CCCceEEEEecCccc
Confidence 9998875 66778889999999999999 99999999999999999987733 223333 567899999999
Q ss_pred ----------CCCEEEEEeCCCcEEEEECCCC----cEEEEeccCCCCEEEEEECCC---CCeEEEEeCCCcEEEEeCCC
Q 016187 247 ----------DSTLALSGSKDGSVHMVNITTG----KVVSSLVSHTDSIECIGFSRS---SPWAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 247 ----------~~~~l~~g~~dg~i~i~d~~~~----~~~~~~~~h~~~i~~v~~~~~---~~~l~s~s~dg~i~iwd~~~ 309 (394)
++.++++|+.||+|++||++++ .....+..|..+|.+++|+|+ +.++++++.||+|++||+..
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 5899999999999999999877 566778899999999999999 89999999999999999976
Q ss_pred CC------cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Q 016187 310 SL------PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS 350 (394)
Q Consensus 310 ~~------~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~ 350 (394)
.. ......|...|++++|+|++++|++|+.||.|++|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 52 222335778899999999999999999999999999874
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.8e-35 Score=273.10 Aligned_cols=278 Identities=14% Similarity=0.117 Sum_probs=240.1
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeE-----eecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-----EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~-----~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~ 139 (394)
..+.+++|+| ++.++++++.|+.+++||+.+++... .+.+|...|.+++|+|+++++++++.|+.|++||+.++
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 4456899999 78899999999999999999988877 45689999999999999999999999999999999999
Q ss_pred ceEEEEecCCCCEEEEEEcCCCCEE-EEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEe--------
Q 016187 140 NLKCTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-------- 210 (394)
Q Consensus 140 ~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------- 210 (394)
+....+..+...+.+++|+|+++.+ ++++.++.|++||+.+++.+..+..+. .+.+++|+|++++|++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEEEcCCCCEEEEEECCCCcccc
Confidence 9988888888899999999999877 556689999999999888877776554 588999999999999888
Q ss_pred CCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCC
Q 016187 211 DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (394)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~ 289 (394)
.|+.|++||+.+++.+..+. +...+.+++++|+++ ++++++.++.|++||+.+++.+..+. +...+.+++|+|+
T Consensus 281 ~dg~i~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~d 355 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTIG----PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPD 355 (433)
T ss_dssp CCEEEEEEETTTTEEEEEEE----EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTT
T ss_pred CCCeEEEEECCCCcEEeecc----CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCC
Confidence 58899999999887766553 344688999999997 45667899999999999998887775 6788999999999
Q ss_pred CCeEEEEeC---------------CCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeC-CCeEEEEECC
Q 016187 290 SPWAATGSM---------------DQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCV-DGKVRVWDSL 349 (394)
Q Consensus 290 ~~~l~s~s~---------------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~-dg~i~iwd~~ 349 (394)
++++++++. ||.|++||+.+............+.+++|+|++++|++++. |+.|++|++.
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 998888876 57999999987765555555677999999999999998875 9999999875
No 120
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.6e-36 Score=283.08 Aligned_cols=254 Identities=16% Similarity=0.179 Sum_probs=204.7
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecC--cccCEEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG--HKDSVSSLAFSMDGQLLASGGLDGLVQIW 134 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~--h~~~V~~v~~s~~g~~l~t~s~d~~i~vw 134 (394)
...+.+|.+.|++|+|+|.++.+|+||+.|++|++||++++........ +...+.+++|+|++++|++|+.|+.|++|
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 3446789999999999998788999999999999999987655443333 44568899999999999999999999999
Q ss_pred eCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCcccee---eeecccCcCeEEEEECCCCCeEEEEe
Q 016187 135 DPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYL---NMFSGHGSSVTCGDFTPDGKTICTGS 210 (394)
Q Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~s~~ 210 (394)
|+. ++.+..+.+|...|.+++|+|++. ++++|+.|+.|++||+.+.+.. ....+|...|++++|+|+|++|++++
T Consensus 237 d~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 237 NMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp ESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred ccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence 986 455667788999999999999876 7889999999999999876543 33467999999999999999999999
Q ss_pred CCCcEEEEcCCCCceEEEEcCCCCcc---cCeEEEEEcCCCCEEEEEe------------CCCcEEEEECCCCcEEEEec
Q 016187 211 DDATLRVWNPKSGENIHVIRGHPYHT---EGLTCLTISADSTLALSGS------------KDGSVHMVNITTGKVVSSLV 275 (394)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~g~------------~dg~i~i~d~~~~~~~~~~~ 275 (394)
.||+|++||+.+++....+..+.... ..+....++|++.+++++. .++.|++||..+++++..+.
T Consensus 316 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 316 QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 99999999999988777665443211 1223345666666666553 34679999999999988865
Q ss_pred -cCCCCEEEE-EECCCCCeEEEEeCCCcEEEEeCCCCCc
Q 016187 276 -SHTDSIECI-GFSRSSPWAATGSMDQKLIIWDLQHSLP 312 (394)
Q Consensus 276 -~h~~~i~~v-~~~~~~~~l~s~s~dg~i~iwd~~~~~~ 312 (394)
.|...|.++ +|+|++.+|++|+ |++|+||+++....
T Consensus 396 ~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 396 DPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred CCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 678888887 6999999999876 88999999987644
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=6.7e-35 Score=257.24 Aligned_cols=290 Identities=13% Similarity=0.063 Sum_probs=188.4
Q ss_pred cEEEEEEcCCCC-c-EEEEecCCCeEEEEEcCCC---eeeEeecCcccCEEEEEEcCCCC-EEEEEeCCCcEE-EEeCC-
Q 016187 66 EVYSVACSPTDA-T-LVATGGGDDKGFFWRINQG---DWASEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQ-IWDPS- 137 (394)
Q Consensus 66 ~v~~~~~~p~~~-~-~lasg~~d~~v~~w~~~~~---~~~~~~~~h~~~V~~v~~s~~g~-~l~t~s~d~~i~-vwd~~- 137 (394)
.|.++.|-..+. . -+++++ ..+|++|+...+ +.+.++.+|..+|..+.|.||-. ++..+-.+-.++ ++-+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 456666655433 2 244444 589999999988 78888888888777777777432 222222111111 11110
Q ss_pred -CC----ceEEEEecCCCCEEEEEEcCCCCEEEEec--CCCeEEEEeC-CccceeeeecccCcCeEEEEECC---CCCeE
Q 016187 138 -SG----NLKCTLEGPGGGVEWVSWHPRGHIVLAGS--EDSTVWMWNA-DRAAYLNMFSGHGSSVTCGDFTP---DGKTI 206 (394)
Q Consensus 138 -~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~s--~d~~i~iw~~-~~~~~~~~~~~h~~~v~~~~~~~---~~~~l 206 (394)
.. .......++...+..+ ++++++.+++ .|+.|++|++ .+++.+..+.+|...++.++|+| ++.+|
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred CCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 00 0000011122122222 4555555533 5888999998 44777778889999999999999 77999
Q ss_pred EEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEE
Q 016187 207 CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGF 286 (394)
Q Consensus 207 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~ 286 (394)
++++.|++|||||+++++.++.+.++..+...+.+++|+|++.++++++.+.. +|
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w----------------------- 251 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KE----------------------- 251 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------------------------
T ss_pred EEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cc-----------------------
Confidence 99999999999999999999999866545567888999999998866554221 11
Q ss_pred CCCCCeEEEEeCCCcEEEEeCCCCCccee------ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecc
Q 016187 287 SRSSPWAATGSMDQKLIIWDLQHSLPRST------CDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGH 360 (394)
Q Consensus 287 ~~~~~~l~s~s~dg~i~iwd~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h 360 (394)
.+++|+.|++|++||..+...... .+|...+.+..++ +.++++|+.|++|+|||+.+++++++|++|
T Consensus 252 -----~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH 324 (356)
T 2w18_A 252 -----SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPV 324 (356)
T ss_dssp -----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred -----eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCC
Confidence 245566666666666654432211 1333333333333 778999999999999999999999999999
Q ss_pred cCcee-EEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 361 RDAIQ-AISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 361 ~~~v~-~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
...+. .++|+||+++|+||+.|++||||++.
T Consensus 325 ~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 325 SDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp --CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 87665 58999999999999999999999963
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=7e-34 Score=263.33 Aligned_cols=266 Identities=15% Similarity=0.137 Sum_probs=229.5
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEE-EEecCCCeEEEEeCCccceeeeecccCcCeEEEE
Q 016187 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGD 198 (394)
Q Consensus 120 ~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~ 198 (394)
.++++++.|+.|++||+.+++.+..+..+. .+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 467889999999999999999888887664 58999999999876 677799999999999998888777665 899999
Q ss_pred ECCCCCeEE-EEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCcEEEEecc
Q 016187 199 FTPDGKTIC-TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLA-LSGSKDGSVHMVNITTGKVVSSLVS 276 (394)
Q Consensus 199 ~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~~~ 276 (394)
|+|++++|+ +++.++.|++||+.+++.+..+.. ...+.+++++|+++.+ ++++.++.|++||+.+++.+..+..
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT----GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC----CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec
Confidence 999999875 555679999999999988777663 3468899999999977 6888899999999999998888776
Q ss_pred CCCCEEEEEECCCCCeE-EEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEe---CCCeEEEEECCCCe
Q 016187 277 HTDSIECIGFSRSSPWA-ATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGC---VDGKVRVWDSLSGD 352 (394)
Q Consensus 277 h~~~i~~v~~~~~~~~l-~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~---~dg~i~iwd~~~~~ 352 (394)
+ ..+.+++|+|++.++ ++++.++.|++||++.........+...+.+++|+|++++|++++ .++.|++||+.+++
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 5 456999999999887 677889999999998876666666777899999999999999888 68999999999999
Q ss_pred EEEEeecccCceeEEEEccCCCEE-EEEeCCCcEEEEeccCC
Q 016187 353 CVRTFSGHRDAIQAISVSAHQDFL-VSVSLDGTARVFEIADF 393 (394)
Q Consensus 353 ~~~~~~~h~~~v~~l~~~~~~~~l-~s~s~dg~i~iw~~~~~ 393 (394)
.+..+..|.. +.+++|+|++++| ++++.|+.|++|++...
T Consensus 236 ~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 236 ITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 9999987664 7899999999977 67789999999998753
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.9e-34 Score=267.62 Aligned_cols=243 Identities=14% Similarity=0.121 Sum_probs=180.9
Q ss_pred ccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeee-----EeecCcccCEEEEEEcC--------CCCEEEEEeCC
Q 016187 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA-----SEIQGHKDSVSSLAFSM--------DGQLLASGGLD 128 (394)
Q Consensus 62 ~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~-----~~~~~h~~~V~~v~~s~--------~g~~l~t~s~d 128 (394)
.|...+....+.| +..+||+|+.|++++||+...++.. ..+.||.+.|++|+|+| ||++|||||.|
T Consensus 87 ~~~~~~~~~~~~~-~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 87 LHDGDGNVNSSPV-YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ----------CCE-EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred ccCCCcceeecCC-CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 3444444444444 5678999999999999999887643 35789999999999998 89999999999
Q ss_pred CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceee----------------------
Q 016187 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLN---------------------- 185 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~---------------------- 185 (394)
++|+|||+.++.....+..+..++.+++|+|++. +|++++.|++|++||+.+++...
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 9999999998888888888999999999999874 89999999999999987654321
Q ss_pred ---eecccCcCeEEEEEC-CCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCC----------------cccCeEEEEEc
Q 016187 186 ---MFSGHGSSVTCGDFT-PDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY----------------HTEGLTCLTIS 245 (394)
Q Consensus 186 ---~~~~h~~~v~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----------------~~~~i~~~~~~ 245 (394)
...+|...+.++.|. |+++.|++++.|+++++||+..++....+..+.. +...+. ..++
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 324 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG-ACPH 324 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSC-CEEC
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCccee-EEEc
Confidence 124677888899986 7999999999999999999987765444432210 011111 2233
Q ss_pred C--CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeC
Q 016187 246 A--DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDL 307 (394)
Q Consensus 246 ~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~ 307 (394)
| ++.++++|+.||+|++||+.+++.+..+..|..+|.+++|+|++++||+++.+| +.+|.+
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 3 445677888999999999999988888888999999999999999999998776 556654
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=1.9e-33 Score=262.55 Aligned_cols=302 Identities=15% Similarity=0.068 Sum_probs=244.9
Q ss_pred CCcEEEEEEcCCCCcEEEEec----CCC----eEEEEEc--CCCeee--EeecCcccCEEEEEEcC--------------
Q 016187 64 SDEVYSVACSPTDATLVATGG----GDD----KGFFWRI--NQGDWA--SEIQGHKDSVSSLAFSM-------------- 117 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~----~d~----~v~~w~~--~~~~~~--~~~~~h~~~V~~v~~s~-------------- 117 (394)
...++..+|.+.+..++++|+ .|+ +++|||+ .+++.+ ..+.+|...++.+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 356777889888888888886 567 8999999 888876 45889999888888775
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCC---eEEEEeCCccceeeeec
Q 016187 118 DGQLLASGGLD------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS---TVWMWNADRAAYLNMFS 188 (394)
Q Consensus 118 ~g~~l~t~s~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~---~i~iw~~~~~~~~~~~~ 188 (394)
.+..++.++.+ +.|++||+.. .....+..+...+.+++|+|+++.|++++.++ .|++||+.+++.. .+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 26667666654 7999999974 44566777888999999999999999998875 9999999988764 456
Q ss_pred ccCcCeEEEEECCCCCeEE-EEeCCCc--EEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC-CC--cEEE
Q 016187 189 GHGSSVTCGDFTPDGKTIC-TGSDDAT--LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK-DG--SVHM 262 (394)
Q Consensus 189 ~h~~~v~~~~~~~~~~~l~-s~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~-dg--~i~i 262 (394)
.|...+.+++|+|+|++|+ +++.++. |++||+.+++. ..+.. +...+.+++|+|+++.+++++. ++ .|.+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~---~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD---GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC---CSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC---CCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 7888899999999999887 6666655 99999988765 33433 4467899999999998888776 44 6888
Q ss_pred EECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCC---CcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeC
Q 016187 263 VNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMD---QKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCV 339 (394)
Q Consensus 263 ~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~ 339 (394)
||+.+++. ..+..+...+.+++|+|++++|++++.+ ..|.+||+.+........+. .+.+++|+|++++|++++.
T Consensus 296 ~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 296 VNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp EETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred EECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 89988764 4455677789999999999999988764 58999999877655544443 7899999999999999888
Q ss_pred CC---eEEEEECCCCeEEEEeecccCceeEEEEccCCC
Q 016187 340 DG---KVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD 374 (394)
Q Consensus 340 dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~ 374 (394)
++ .|++||+. +..++.+.+|.+.|.+++|+|...
T Consensus 374 ~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 374 QGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp ETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 77 89999986 666788999999999999999654
No 125
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=2e-32 Score=263.45 Aligned_cols=315 Identities=11% Similarity=0.022 Sum_probs=252.1
Q ss_pred EcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeC--CCCceEEEEecCC
Q 016187 72 CSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP--SSGNLKCTLEGPG 149 (394)
Q Consensus 72 ~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~--~~~~~~~~~~~~~ 149 (394)
++|+ +.++++++.|++|.+||..+++.+.++..+.. +.+++|+|+|++|++++.|++|++||+ .+++.+.++.. .
T Consensus 145 ~~p~-~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 145 LDLP-NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCGG-GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred cCCC-CEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 6784 57889999999999999999999999884333 899999999999999999999999999 88888888774 4
Q ss_pred CCEEEEEEcC----CCCEEEEec-CCCeEEEEeCCccceeeeeccc----------C-cCeEEEEECCCCC-eEEEEeCC
Q 016187 150 GGVEWVSWHP----RGHIVLAGS-EDSTVWMWNADRAAYLNMFSGH----------G-SSVTCGDFTPDGK-TICTGSDD 212 (394)
Q Consensus 150 ~~v~~~~~~~----~~~~l~~~s-~d~~i~iw~~~~~~~~~~~~~h----------~-~~v~~~~~~~~~~-~l~s~~~d 212 (394)
..+..++|+| +++++++++ .+++|.+||..+.+.++.+..+ . ..+..+.++|++. ++++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 5678999999 999998887 4899999999998888776542 2 2688899999765 45677889
Q ss_pred CcEEEEcCCCCceEE--EEcCCCCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCcEEEEecc----CCCCEEEEE
Q 016187 213 ATLRVWNPKSGENIH--VIRGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITTGKVVSSLVS----HTDSIECIG 285 (394)
Q Consensus 213 g~i~vwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~g-~~dg~i~i~d~~~~~~~~~~~~----h~~~i~~v~ 285 (394)
++|.+||+.+.+.+. .+. +...+..+.|+|++++++++ ..+++|.+||+.+++++..+.. |......+
T Consensus 302 g~i~vvd~~~~~~l~~~~i~----~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~- 376 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIG----AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF- 376 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEE----CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-
T ss_pred CeEEEEEecCCCcceeEEec----cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-
Confidence 999999998876544 332 23346678999999977655 5689999999999998888764 54433333
Q ss_pred ECCC-CCeEEEEe-CCCcEEEEeCCC-------CCcc-eeccCCCCEEEEEEeCCCCEEEEEe-------CCCeEEEEEC
Q 016187 286 FSRS-SPWAATGS-MDQKLIIWDLQH-------SLPR-STCDHEDGVTCLMWLGTSKYVVTGC-------VDGKVRVWDS 348 (394)
Q Consensus 286 ~~~~-~~~l~s~s-~dg~i~iwd~~~-------~~~~-~~~~~~~~v~~~~~~~~~~~l~sg~-------~dg~i~iwd~ 348 (394)
++|+ +++++++. .|++|.+||+.+ .... ....|...+..+.++|++++|++++ .+++|.+||+
T Consensus 377 ~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 377 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence 4676 66777776 589999999976 3322 2334666778899999999999987 2779999999
Q ss_pred CCCeEE-EEe--------ecccCceeEEEEccCCCEEEEE-----eCCCcEEEEeccCCC
Q 016187 349 LSGDCV-RTF--------SGHRDAIQAISVSAHQDFLVSV-----SLDGTARVFEIADFK 394 (394)
Q Consensus 349 ~~~~~~-~~~--------~~h~~~v~~l~~~~~~~~l~s~-----s~dg~i~iw~~~~~~ 394 (394)
.+++.. ..+ ..+...+..+.|+|+|+.|+.+ +.|+.|.+||.++.|
T Consensus 457 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 457 KNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp TCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 999877 554 3567889999999999998865 247999999988753
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-34 Score=259.63 Aligned_cols=237 Identities=9% Similarity=0.085 Sum_probs=192.6
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcC
Q 016187 114 AFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSS 193 (394)
Q Consensus 114 ~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~ 193 (394)
.+.+++.+|++|+.|++|++||+.+++.+..+. ...|..+.|+|. +++++.|+++++|+...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------- 104 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------- 104 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT-------------
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC-------------
Confidence 345678899999999999999999988877765 345667778887 88888899998888653
Q ss_pred eEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCcEE
Q 016187 194 VTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVV 271 (394)
Q Consensus 194 v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~g~~dg~i~i~d~~~~~~~ 271 (394)
.+.+|++.+++.+..... .|...|.+++++| ++.++++++.||+|++||+++++.+
T Consensus 105 --------------------~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~ 162 (343)
T 3lrv_A 105 --------------------QITILDSKTNKVLREIEV--DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQY 162 (343)
T ss_dssp --------------------EEEEEETTTCCEEEEEEC--CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEE
T ss_pred --------------------ceEEeecCCcceeEEeec--CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 456778777775555442 2456799999999 9999999999999999999999987
Q ss_pred EEecc-CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcc--eecc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Q 016187 272 SSLVS-HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPR--STCD-HEDGVTCLMWLGTSKYVVTGCVDGKVRVWD 347 (394)
Q Consensus 272 ~~~~~-h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd 347 (394)
..... |...+.+++|+|++.+|++|+.||.|++||+++.... .... |...|++++|+|++.+|++++ ++.|++||
T Consensus 163 ~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd 241 (343)
T 3lrv_A 163 IVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFD 241 (343)
T ss_dssp EEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEE
T ss_pred EEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEE
Confidence 66643 5568999999999999999999999999999876544 3444 899999999999999999999 55999999
Q ss_pred CCCCeEEEEeec---ccCcee--EEEEccCCCEEEEEeC-CCcEEEEecc
Q 016187 348 SLSGDCVRTFSG---HRDAIQ--AISVSAHQDFLVSVSL-DGTARVFEIA 391 (394)
Q Consensus 348 ~~~~~~~~~~~~---h~~~v~--~l~~~~~~~~l~s~s~-dg~i~iw~~~ 391 (394)
+++++++..+.. |...+. +++|+|++++|++++. |+.|++|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 242 LRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp TTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 999877655443 555555 5999999999999998 9999999874
No 127
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.5e-32 Score=246.70 Aligned_cols=253 Identities=14% Similarity=0.227 Sum_probs=192.3
Q ss_pred CceeeeeccCCcEEEEEEcCC-CCcEEEEecCCCeEEEEEcCCC---------eeeEeecCcccCEEEEEEcCC--CCEE
Q 016187 55 DSTHIFSGHSDEVYSVACSPT-DATLVATGGGDDKGFFWRINQG---------DWASEIQGHKDSVSSLAFSMD--GQLL 122 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~-~~~~lasg~~d~~v~~w~~~~~---------~~~~~~~~h~~~V~~v~~s~~--g~~l 122 (394)
.....+.+|...|++++|+|. ++.+|++|+.|+++++|++..+ +....+.+|...|.+++|+|+ +.+|
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 346677899999999999995 4678999999999999999876 567788999999999999999 9999
Q ss_pred EEEeCCCcEEEEeCCCCceEEEEe-------------cCCCCEEEEEEcCC---CCEEEEecCCCeEEEEeCCccce--e
Q 016187 123 ASGGLDGLVQIWDPSSGNLKCTLE-------------GPGGGVEWVSWHPR---GHIVLAGSEDSTVWMWNADRAAY--L 184 (394)
Q Consensus 123 ~t~s~d~~i~vwd~~~~~~~~~~~-------------~~~~~v~~~~~~~~---~~~l~~~s~d~~i~iw~~~~~~~--~ 184 (394)
++++.|+.|++||+.+++....+. .+...+.+++|+|+ +.++++++.++.+.+|+...++. +
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 207 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee
Confidence 999999999999998876432221 46778999999997 88999999999998888776654 6
Q ss_pred eeecccCcCeEEEEECCCC----CeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEE----EeC
Q 016187 185 NMFSGHGSSVTCGDFTPDG----KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALS----GSK 256 (394)
Q Consensus 185 ~~~~~h~~~v~~~~~~~~~----~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~----g~~ 256 (394)
..+.+|...|++++|+|++ ++|++|+.||.|++||++.+........ ..........++....+.. +..
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEE---SLTNSNMFDNSADVDMDAQGRSDSNT 284 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCC---cccceeccCCCccccccccccccccc
Confidence 6788999999999999998 8999999999999999987654332221 1112222233333333333 334
Q ss_pred CCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC
Q 016187 257 DGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHS 310 (394)
Q Consensus 257 dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~ 310 (394)
...+.+|+....+.+..+.+|...|.+++|+|++++|++++.||.|++|++...
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 285 EEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp ------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred ceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 455666776677888889999999999999999999999999999999998764
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=8.6e-32 Score=237.47 Aligned_cols=248 Identities=15% Similarity=0.126 Sum_probs=182.7
Q ss_pred CceeeeeccCCcEEEEEEcCCCCcEEEEecCCC-eEEEEEcCC--C----eeeEeecCcccCEEEEEEcCCCCEEEEEe-
Q 016187 55 DSTHIFSGHSDEVYSVACSPTDATLVATGGGDD-KGFFWRINQ--G----DWASEIQGHKDSVSSLAFSMDGQLLASGG- 126 (394)
Q Consensus 55 ~~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~-~v~~w~~~~--~----~~~~~~~~h~~~V~~v~~s~~g~~l~t~s- 126 (394)
...+.+.+|..+|..|++.|+..+++..+=+.- .-.++.+.- . .....-.+|...|..+ ++|+++.+++
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~ 153 (356)
T 2w18_A 77 EKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGT 153 (356)
T ss_dssp EEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESS
T ss_pred eeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEeccc
Confidence 567778889989999999886555544332222 222333211 1 1111124566556554 5666666644
Q ss_pred -CCCcEEEEeC-CCCceEEEEecCCCCEEEEEEcC---CCCEEEEecCCCeEEEEeCCccceeeeecccC---cCeEEEE
Q 016187 127 -LDGLVQIWDP-SSGNLKCTLEGPGGGVEWVSWHP---RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG---SSVTCGD 198 (394)
Q Consensus 127 -~d~~i~vwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~---~~v~~~~ 198 (394)
.|+.|++|++ .+|+.+..+..|...++.++|+| ++.+|++++.|++|++||+.++++++.+.+|. ..+.+++
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~va 233 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKA 233 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEE
T ss_pred CCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEE
Confidence 5899999998 45888888888999999999999 67899999999999999999999999998754 3567789
Q ss_pred ECCCCCeE------------EEEeCCCcEEEEcCCCCceEEEEcC--CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 016187 199 FTPDGKTI------------CTGSDDATLRVWNPKSGENIHVIRG--HPYHTEGLTCLTISADSTLALSGSKDGSVHMVN 264 (394)
Q Consensus 199 ~~~~~~~l------------~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d 264 (394)
|+|+|+++ ++|+.|++|++||+.+++.+..+.. ...|...+.+. +.++.++++|+.|++|+|||
T Consensus 234 fSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg--~~sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 234 YSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG--DVKDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE--EEETTEEEEEETTSCEEEEE
T ss_pred ECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcc--ccCCCEEEEEcCCCcEEEEE
Confidence 99999876 6688999999999999987765421 11233333333 33478899999999999999
Q ss_pred CCCCcEEEEeccCCCCEE-EEEECCCCCeEEEEeCCCcEEEEeC
Q 016187 265 ITTGKVVSSLVSHTDSIE-CIGFSRSSPWAATGSMDQKLIIWDL 307 (394)
Q Consensus 265 ~~~~~~~~~~~~h~~~i~-~v~~~~~~~~l~s~s~dg~i~iwd~ 307 (394)
+.+++++.++.+|...+. +++|+|++++|++|+.|++|+|||+
T Consensus 312 l~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999999987655 6899999999999999999999985
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=4.3e-31 Score=264.75 Aligned_cols=320 Identities=12% Similarity=0.093 Sum_probs=245.7
Q ss_pred CCcEEEEEEcCCCCcEEEEecC-CC-----eEEEEEcCCCeeeEeecCccc------------------------CEEEE
Q 016187 64 SDEVYSVACSPTDATLVATGGG-DD-----KGFFWRINQGDWASEIQGHKD------------------------SVSSL 113 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~-d~-----~v~~w~~~~~~~~~~~~~h~~------------------------~V~~v 113 (394)
...|.+++|+|+ +.+||+++. |+ .+++|++.+++....+..|.. .|.++
T Consensus 36 ~~~~~~~~~Spd-G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPD-GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTT-SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecC-CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 446899999995 567777777 88 899999999987777665543 38899
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCc--eEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccC
Q 016187 114 AFSMDGQLLASGGLDGLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG 191 (394)
Q Consensus 114 ~~s~~g~~l~t~s~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~ 191 (394)
+|||||++|++++. +.|++||+.++. ....+..+...+..++|+|+|++|+.++ ++.|++|++.+++..+....+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 99999999999886 899999999882 3334566777899999999999998887 4699999998877655544443
Q ss_pred cC----------------eEEEEECCCCCeEEEEeCCC---------------------------------cEEEEcCCC
Q 016187 192 SS----------------VTCGDFTPDGKTICTGSDDA---------------------------------TLRVWNPKS 222 (394)
Q Consensus 192 ~~----------------v~~~~~~~~~~~l~s~~~dg---------------------------------~i~vwd~~~ 222 (394)
.. +..++|+|||++|++++.|+ .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 36789999999999988776 789999988
Q ss_pred -CceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCcEEEEeccCCC----CEEEEEECCCCCe
Q 016187 223 -GENIHVIRGHPYHTEGLTCLTISADSTLALSGSK-----DGSVHMVNITTGKVVSSLVSHTD----SIECIGFSRSSPW 292 (394)
Q Consensus 223 -~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~-----dg~i~i~d~~~~~~~~~~~~h~~----~i~~v~~~~~~~~ 292 (394)
++....... ..+...+..++| |+|+.+++++. +..|++||+.+++....+..+.. .+..++|+|++++
T Consensus 273 ~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~ 350 (741)
T 2ecf_A 273 QAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSI 350 (741)
T ss_dssp TCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCE
T ss_pred CCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeE
Confidence 765433221 124566889999 99999887653 56899999999987766655443 4568899999999
Q ss_pred EEEEeCCCcEEEEeCC--CCCcceeccCCCCEEEE-EEeCCCCEEEE-EeCCC--eEEEEECCC-CeEEEEeecccCcee
Q 016187 293 AATGSMDQKLIIWDLQ--HSLPRSTCDHEDGVTCL-MWLGTSKYVVT-GCVDG--KVRVWDSLS-GDCVRTFSGHRDAIQ 365 (394)
Q Consensus 293 l~s~s~dg~i~iwd~~--~~~~~~~~~~~~~v~~~-~~~~~~~~l~s-g~~dg--~i~iwd~~~-~~~~~~~~~h~~~v~ 365 (394)
+++++.||.++||.+. .. ......+...+..+ .|+|++++|+. ++.++ .+++|++.. +..+..+.. ...+.
T Consensus 351 ~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~ 428 (741)
T 2ecf_A 351 LWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMH 428 (741)
T ss_dssp EEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEE
T ss_pred EEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCce
Confidence 9999999988887654 33 34444566678776 59999987754 55555 899998764 666777776 66788
Q ss_pred EEEEccCCCEEEEEeCC----CcEEEEec
Q 016187 366 AISVSAHQDFLVSVSLD----GTARVFEI 390 (394)
Q Consensus 366 ~l~~~~~~~~l~s~s~d----g~i~iw~~ 390 (394)
.++|+||+++|+....+ ..+.+|+.
T Consensus 429 ~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 429 SASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp EEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred EEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 99999999988865443 45777764
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=3.3e-30 Score=267.28 Aligned_cols=327 Identities=13% Similarity=0.108 Sum_probs=256.7
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecC------CCeEEEEEcCCCeeeEeecCcccCE-------EEEEEcCCCCEEE
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGG------DDKGFFWRINQGDWASEIQGHKDSV-------SSLAFSMDGQLLA 123 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~------d~~v~~w~~~~~~~~~~~~~h~~~V-------~~v~~s~~g~~l~ 123 (394)
...+.+|...|.+++|||+ ++.||+++. +..+++|++.+++ ...+..|...+ .+++|||||++++
T Consensus 45 ~~~lt~~~~~v~~~~~SPD-G~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~ 122 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPD-GRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLII 122 (1045)
T ss_dssp EEEEECSSSEEEEEEECTT-SSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred EEEeeeCCCcccCeEECCC-CCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEE
Confidence 4567889999999999996 556666543 3479999998877 56788898888 9999999999888
Q ss_pred EEeCC------CcEEEEeCCCCceE-------------------------------------------------EEEecC
Q 016187 124 SGGLD------GLVQIWDPSSGNLK-------------------------------------------------CTLEGP 148 (394)
Q Consensus 124 t~s~d------~~i~vwd~~~~~~~-------------------------------------------------~~~~~~ 148 (394)
+++.+ ..|.+|++.+++.. ..+.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~ 202 (1045)
T 1k32_A 123 STDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDM 202 (1045)
T ss_dssp EECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECC
T ss_pred EECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCC
Confidence 88754 35777876555422 122345
Q ss_pred CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCc-cceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEE
Q 016187 149 GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-AAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIH 227 (394)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 227 (394)
...+.++.|+++ .++++++.++.+.+|.+.. +.....+..|. .+...+|+|+|++|+.+ .++.|.+||+.. ..+.
T Consensus 203 ~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~-~~l~ 278 (1045)
T 1k32_A 203 STHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDT-EKIE 278 (1045)
T ss_dssp SSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTT-CCEE
T ss_pred CCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCc-eEee
Confidence 667778888887 6677788888888887643 33344455554 35567999999999887 489999999844 3343
Q ss_pred EEcCCC--------CcccCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC-CEEEEEECCCCCeEEEEe
Q 016187 228 VIRGHP--------YHTEGLTCLTIS-ADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTD-SIECIGFSRSSPWAATGS 297 (394)
Q Consensus 228 ~~~~~~--------~~~~~i~~~~~~-~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~-~i~~v~~~~~~~~l~s~s 297 (394)
.+.... .+...+..++|+ |+|+.+++++ ++.|.+|++..++.. .+..|.. .+..++|+ +++.+++++
T Consensus 279 ~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s 355 (1045)
T 1k32_A 279 KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGT 355 (1045)
T ss_dssp ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEE
T ss_pred eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEE
Confidence 433211 022357889999 9999988887 789999999887754 4666777 89999999 999999999
Q ss_pred CCCcEE-EEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEE
Q 016187 298 MDQKLI-IWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFL 376 (394)
Q Consensus 298 ~dg~i~-iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 376 (394)
.++.+. +|++..........|...+..++|+|++++|++++.++.|++||+.+++....+.+|.+.+..++|+||+++|
T Consensus 356 ~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~l 435 (1045)
T 1k32_A 356 REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFI 435 (1045)
T ss_dssp TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEE
T ss_pred CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeE
Confidence 888888 9998876555555677789999999999999999999999999999999888888999999999999999999
Q ss_pred EEEeCCC----------cEEEEeccC
Q 016187 377 VSVSLDG----------TARVFEIAD 392 (394)
Q Consensus 377 ~s~s~dg----------~i~iw~~~~ 392 (394)
++++.++ .|++|++..
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EEEecCccccccCCCCCeEEEEECCC
Confidence 9887754 899999864
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=7e-29 Score=238.79 Aligned_cols=299 Identities=13% Similarity=0.094 Sum_probs=237.5
Q ss_pred eeeee-ccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEc--CCCeeeEeecCcccCEEEEEEcC----CCCEEEEEeC-C
Q 016187 57 THIFS-GHSDEVYSVACSPTDATLVATGGGDDKGFFWRI--NQGDWASEIQGHKDSVSSLAFSM----DGQLLASGGL-D 128 (394)
Q Consensus 57 ~~~~~-~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~--~~~~~~~~~~~h~~~V~~v~~s~----~g~~l~t~s~-d 128 (394)
...+. +|. +..++|+|+ +++|++++.|++|++||+ .+++.+.++.. ...+..++|+| +|++|++++. +
T Consensus 172 ~~~i~~g~~--~~~v~~spd-g~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 172 VKVIDTGYA--VHISRMSAS-GRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp EEEEECSTT--EEEEEECTT-SCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred EEEEecCcc--cceEEECCC-CCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 44444 443 899999995 567778888999999999 88888888884 45679999999 9999998884 8
Q ss_pred CcEEEEeCCCCceEEEEecC-----------CCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceee--eecccCcCe
Q 016187 129 GLVQIWDPSSGNLKCTLEGP-----------GGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLN--MFSGHGSSV 194 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~--~~~~h~~~v 194 (394)
++|.+||..+++.+..+..+ ...+..+.++|++. ++++...++.|.+||..+.+.+. .+ .+...+
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~ 326 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFL 326 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSC
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCc
Confidence 99999999999988877642 23688999999776 56777889999999998765433 33 355667
Q ss_pred EEEEECCCCCeEEEE-eCCCcEEEEcCCCCceEEEEcCCC-CcccCeEEEEEcCC-CCEEEEEe-CCCcEEEEECCC---
Q 016187 195 TCGDFTPDGKTICTG-SDDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISAD-STLALSGS-KDGSVHMVNITT--- 267 (394)
Q Consensus 195 ~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~-~~~l~~g~-~dg~i~i~d~~~--- 267 (394)
..++|+|+|++|+++ ..+++|.+||+.+++.+..+.... .|......+ ++|+ +.+++++. .|++|.+||+.+
T Consensus 327 ~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 327 HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred cCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 789999999987655 568999999999999887776321 132222233 4676 66667765 689999999988
Q ss_pred ----CcEEEEeccCCCCEEEEEECCCCCeEEEEe-------CCCcEEEEeCCCCCcc-ee---------ccCCCCEEEEE
Q 016187 268 ----GKVVSSLVSHTDSIECIGFSRSSPWAATGS-------MDQKLIIWDLQHSLPR-ST---------CDHEDGVTCLM 326 (394)
Q Consensus 268 ----~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s-------~dg~i~iwd~~~~~~~-~~---------~~~~~~v~~~~ 326 (394)
.+++.++..|...+..++++|++++|++++ .+++|.+||+.+.... .. ..+...+..+.
T Consensus 406 ~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 485 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPE 485 (543)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEE
T ss_pred chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEecc
Confidence 899999999988889999999999999987 2779999999876544 22 13467799999
Q ss_pred EeCCCCEEEEEe-----CCCeEEEEECCCCeEEEEeeccc
Q 016187 327 WLGTSKYVVTGC-----VDGKVRVWDSLSGDCVRTFSGHR 361 (394)
Q Consensus 327 ~~~~~~~l~sg~-----~dg~i~iwd~~~~~~~~~~~~h~ 361 (394)
|+|+|++|..+. .++.|.|||..|++++++++...
T Consensus 486 ~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 486 YNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp ECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred CCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCC
Confidence 999999998763 47999999999999999998644
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.98 E-value=1.7e-30 Score=242.48 Aligned_cols=277 Identities=13% Similarity=0.105 Sum_probs=221.1
Q ss_pred ccCEEEEEEcCCCC-EEEEEe----CCC----cEEEEeC--CCCceE--EEEecCCCCEEEEEEcC--------------
Q 016187 107 KDSVSSLAFSMDGQ-LLASGG----LDG----LVQIWDP--SSGNLK--CTLEGPGGGVEWVSWHP-------------- 159 (394)
Q Consensus 107 ~~~V~~v~~s~~g~-~l~t~s----~d~----~i~vwd~--~~~~~~--~~~~~~~~~v~~~~~~~-------------- 159 (394)
...|....|++.|. ++++|+ .+| ++++||+ .+++.+ ..+.++...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 35677888988885 666876 467 8999999 888876 44777777676666654
Q ss_pred CCCEEEEecCC------CeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCC---cEEEEcCCCCceEEEEc
Q 016187 160 RGHIVLAGSED------STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA---TLRVWNPKSGENIHVIR 230 (394)
Q Consensus 160 ~~~~l~~~s~d------~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~ 230 (394)
.+..++.++.+ +.|++||.... ..+.+.+|...+.+++|+|+|++|++++.++ .|++||+.+++... +.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-ee
Confidence 14555555543 79999999754 4567778999999999999999999999885 99999999887653 33
Q ss_pred CCCCcccCeEEEEEcCCCCEEE-EEeCCCc--EEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeC-CC--cEEE
Q 016187 231 GHPYHTEGLTCLTISADSTLAL-SGSKDGS--VHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSM-DQ--KLII 304 (394)
Q Consensus 231 ~~~~~~~~i~~~~~~~~~~~l~-~g~~dg~--i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~-dg--~i~i 304 (394)
. +...+.+++|+|+++.++ +++.++. |++||+.+++. ..+..|...+.+++|+|++++|++++. ++ .|.+
T Consensus 220 ~---~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 220 S---FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp C---CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred c---CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 3 345789999999999777 6666655 99999998876 567788889999999999999988876 44 6777
Q ss_pred EeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeC
Q 016187 305 WDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVD---GKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSL 381 (394)
Q Consensus 305 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~ 381 (394)
||+..........+...+.+++|+|++++|++++.+ +.|++||+.+++.. .+..|. .+.+++|+|++++|++++.
T Consensus 296 ~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 296 VNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp EETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEE
T ss_pred EECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEc
Confidence 898876655555566778899999999999988764 58999999988774 566665 8899999999999999988
Q ss_pred CC---cEEEEecc
Q 016187 382 DG---TARVFEIA 391 (394)
Q Consensus 382 dg---~i~iw~~~ 391 (394)
++ .|++|++.
T Consensus 374 ~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 374 QGMGSVLNLVSTD 386 (415)
T ss_dssp ETTEEEEEEEETT
T ss_pred CCCccEEEEEECC
Confidence 77 79999875
No 133
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=1e-28 Score=256.21 Aligned_cols=322 Identities=14% Similarity=0.124 Sum_probs=254.5
Q ss_pred eeeeeccCCcE-------EEEEEcCCCCcEEEEecCC------CeEEEEEcCCCeee-----------------------
Q 016187 57 THIFSGHSDEV-------YSVACSPTDATLVATGGGD------DKGFFWRINQGDWA----------------------- 100 (394)
Q Consensus 57 ~~~~~~h~~~v-------~~~~~~p~~~~~lasg~~d------~~v~~w~~~~~~~~----------------------- 100 (394)
...+.+|...+ ..++|+|++. ++++++.+ ..+++|++.+++..
T Consensus 92 ~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~ 170 (1045)
T 1k32_A 92 IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNT 170 (1045)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESC
T ss_pred eEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccC
Confidence 55677888888 9999999765 77887754 45777877554422
Q ss_pred --------------------------EeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CceEEEEecCCCCEE
Q 016187 101 --------------------------SEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGPGGGVE 153 (394)
Q Consensus 101 --------------------------~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~-~~~~~~~~~~~~~v~ 153 (394)
..+.+|...+.++.|+++ .++++++.++.++||.+.. +.....+..+. .+.
T Consensus 171 ~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~ 248 (1045)
T 1k32_A 171 FELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYY 248 (1045)
T ss_dssp SCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSC
T ss_pred CCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Ccc
Confidence 123467788889999988 6777888889999997643 33344454444 456
Q ss_pred EEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecc-----------cCcCeEEEEEC-CCCCeEEEEeCCCcEEEEcCC
Q 016187 154 WVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG-----------HGSSVTCGDFT-PDGKTICTGSDDATLRVWNPK 221 (394)
Q Consensus 154 ~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~-----------h~~~v~~~~~~-~~~~~l~s~~~dg~i~vwd~~ 221 (394)
..+|+|+++.++.+ .++.|++|++...+. ..+.+ |...+.+++|+ |+|++|++++ ++.|.+|++.
T Consensus 249 ~~~~SpDG~~la~~-~~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~ 325 (1045)
T 1k32_A 249 PRHLNTDGRRILFS-KGGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS 325 (1045)
T ss_dssp EEEEEESSSCEEEE-ETTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT
T ss_pred eeeEcCCCCEEEEE-eCCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC
Confidence 67999999988877 589999999854433 34443 34468899999 9999999888 7899999998
Q ss_pred CCceEEEEcCCCCccc-CeEEEEEcCCCCEEEEEeCCCcEE-EEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCC
Q 016187 222 SGENIHVIRGHPYHTE-GLTCLTISADSTLALSGSKDGSVH-MVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMD 299 (394)
Q Consensus 222 ~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~g~~dg~i~-i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~d 299 (394)
+++... +.. +.. .+..+.|+ +++.++.++.++.+. +|++.+++.. .+..|...+..++|+|++++|++++.+
T Consensus 326 ~~~~~~-~~~---~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~ 399 (1045)
T 1k32_A 326 GTYVLK-VPE---PLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDR 399 (1045)
T ss_dssp SSBEEE-CSC---CSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETT
T ss_pred CCceEE-ccC---CCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCC
Confidence 776433 332 334 68889999 999999988888898 9999887654 444788899999999999999999999
Q ss_pred CcEEEEeCCCCCcceec-cCCCCEEEEEEeCCCCEEEEEeCCC----------eEEEEECCCCeEEEEeecccCceeEEE
Q 016187 300 QKLIIWDLQHSLPRSTC-DHEDGVTCLMWLGTSKYVVTGCVDG----------KVRVWDSLSGDCVRTFSGHRDAIQAIS 368 (394)
Q Consensus 300 g~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg----------~i~iwd~~~~~~~~~~~~h~~~v~~l~ 368 (394)
+.|++||+.+....... .|...+.+++|+|++++|++++.++ .|++||+.+++ +..+..|...+..++
T Consensus 400 ~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~ 478 (1045)
T 1k32_A 400 FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPA 478 (1045)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEE
T ss_pred CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCce
Confidence 99999999877655554 6777889999999999999887654 89999999887 677888988899999
Q ss_pred EccCCCEEEEEeCCCcEEEEecc
Q 016187 369 VSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 369 ~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
|+|||++|+.++.++..++|+..
T Consensus 479 ~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 479 FDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp ECTTSCEEEEEESCCCCCEECSS
T ss_pred EcCCCCEEEEEecccCCcCcchh
Confidence 99999999999998888888753
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=1.4e-29 Score=253.07 Aligned_cols=311 Identities=12% Similarity=0.090 Sum_probs=229.5
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCccc---CEEEEEEcCCCCEEEEEeCC---------CcEEE
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGGLD---------GLVQI 133 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~---~V~~v~~s~~g~~l~t~s~d---------~~i~v 133 (394)
.+.+++|+|++ .++++ +.|+++++||+.+++....+.+|.. .|.+++|||||++|++++.+ +.+.+
T Consensus 18 ~~~~~~~spdg-~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDT-EFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSS-CBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCC-cEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 35678999965 46665 7899999999999988888887765 49999999999999999875 77889
Q ss_pred EeCCCCceEEEEe---cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCe----------------
Q 016187 134 WDPSSGNLKCTLE---GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSV---------------- 194 (394)
Q Consensus 134 wd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v---------------- 194 (394)
||+.+++. ..+. .+...+..++|+|+|+.|+.++. +.|++|++.+++..+....+...+
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 99998876 2333 23334788999999999988876 799999998877666555443333
Q ss_pred --EEEEECCCCCeEEEEeCCC----------------------------------cEEEEcCCCCceEEEEcCCC---Cc
Q 016187 195 --TCGDFTPDGKTICTGSDDA----------------------------------TLRVWNPKSGENIHVIRGHP---YH 235 (394)
Q Consensus 195 --~~~~~~~~~~~l~s~~~dg----------------------------------~i~vwd~~~~~~~~~~~~~~---~~ 235 (394)
.+++|+|||++|++++.|+ .|++||+.+++....+..+. .+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 7899999999999887653 79999998887544444321 12
Q ss_pred ccCeEEEEEcCCCCEEEEEeC----CCcEEEEECCCCcEEEEecc-CCCCEE----EEEECCCCCeEEE--EeCCC----
Q 016187 236 TEGLTCLTISADSTLALSGSK----DGSVHMVNITTGKVVSSLVS-HTDSIE----CIGFSRSSPWAAT--GSMDQ---- 300 (394)
Q Consensus 236 ~~~i~~~~~~~~~~~l~~g~~----dg~i~i~d~~~~~~~~~~~~-h~~~i~----~v~~~~~~~~l~s--~s~dg---- 300 (394)
...+..++|+|||+++++... +..|++||+.+++....+.. +...+. .++|+|++++|+. +..++
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 333 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGK 333 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSC
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcc
Confidence 446889999999998876643 35799999999987665543 334443 7899999997765 45677
Q ss_pred --cEEEEe-CCCCC---cceeccCCCCEEE-EEEeCCCCEEEEEeCC---CeEEEEECCCC--eEEEEeec---ccCcee
Q 016187 301 --KLIIWD-LQHSL---PRSTCDHEDGVTC-LMWLGTSKYVVTGCVD---GKVRVWDSLSG--DCVRTFSG---HRDAIQ 365 (394)
Q Consensus 301 --~i~iwd-~~~~~---~~~~~~~~~~v~~-~~~~~~~~~l~sg~~d---g~i~iwd~~~~--~~~~~~~~---h~~~v~ 365 (394)
.|.+|| ..... ..........+.. +.|+|++++|+..+.+ +.+++|++... .....+.. |...+.
T Consensus 334 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~ 413 (723)
T 1xfd_A 334 FYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYF 413 (723)
T ss_dssp EEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCC
T ss_pred eeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeE
Confidence 577777 34433 3333323334544 6899999999766655 78999987543 23444554 677789
Q ss_pred EEEEccCCCEEEEEe
Q 016187 366 AISVSAHQDFLVSVS 380 (394)
Q Consensus 366 ~l~~~~~~~~l~s~s 380 (394)
.++|+||+++|+...
T Consensus 414 ~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 414 SASFSHSMDFFLLKC 428 (723)
T ss_dssp EEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEc
Confidence 999999999887643
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=4.5e-27 Score=212.52 Aligned_cols=275 Identities=13% Similarity=0.084 Sum_probs=206.3
Q ss_pred EEEcCCCCE-EEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEec-CCCeEEEEeCCccce-eeeecc
Q 016187 113 LAFSMDGQL-LASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNADRAAY-LNMFSG 189 (394)
Q Consensus 113 v~~s~~g~~-l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s-~d~~i~iw~~~~~~~-~~~~~~ 189 (394)
..|.+++.+ +++++.++.|++||+.+++....+..+...+ .++|+|+++++++++ .++.|++||..+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 356666655 6788889999999999999888777666667 999999999665555 489999999998887 666666
Q ss_pred cCcCeEEEEECCCCCeEEEEeCCC---cEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEE-EEeCCCc-EEEEE
Q 016187 190 HGSSVTCGDFTPDGKTICTGSDDA---TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDGS-VHMVN 264 (394)
Q Consensus 190 h~~~v~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~g~~dg~-i~i~d 264 (394)
+..+..+++|+|+|++|+++..++ .|++||+.+++.+..+.. ......++++|++++++ ++..++. |.+|+
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI----PYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC----CTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC----CCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 666665599999999999655553 899999999887776653 23468999999998554 4556688 99999
Q ss_pred CCCCcEE----EEeccCCCCEEEEEECCCCCeEE-EEeCCCcEEEEeCCCCCc---ceeccCCCCEEEEEEeCCCCEEEE
Q 016187 265 ITTGKVV----SSLVSHTDSIECIGFSRSSPWAA-TGSMDQKLIIWDLQHSLP---RSTCDHEDGVTCLMWLGTSKYVVT 336 (394)
Q Consensus 265 ~~~~~~~----~~~~~h~~~i~~v~~~~~~~~l~-s~s~dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~s 336 (394)
+.....+ .........+..++|+|++++++ ++..++.|.+||+.+... .........+..++|+|++++|++
T Consensus 158 ~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 237 (331)
T 3u4y_A 158 IDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYV 237 (331)
T ss_dssp ECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEE
T ss_pred ECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEE
Confidence 8754322 12223445689999999999655 455689999999987665 444445566788999999997776
Q ss_pred Ee-CCCeEEEEECCCCeE--EEEeecc----cCc---eeEEEEccCCCEEEEEe-CCCcEEEEeccC
Q 016187 337 GC-VDGKVRVWDSLSGDC--VRTFSGH----RDA---IQAISVSAHQDFLVSVS-LDGTARVFEIAD 392 (394)
Q Consensus 337 g~-~dg~i~iwd~~~~~~--~~~~~~h----~~~---v~~l~~~~~~~~l~s~s-~dg~i~iw~~~~ 392 (394)
++ .++.|.+||..+++. +..+..+ ... ...++|+|++++|+.++ .++.|++|++..
T Consensus 238 ~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 238 LTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp ECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred EEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 65 578899999999887 4444432 222 35589999999886554 567999999875
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=3.3e-27 Score=213.41 Aligned_cols=279 Identities=8% Similarity=0.011 Sum_probs=208.1
Q ss_pred EEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCce-EEEEecC
Q 016187 71 ACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL-DGLVQIWDPSSGNL-KCTLEGP 148 (394)
Q Consensus 71 ~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~-d~~i~vwd~~~~~~-~~~~~~~ 148 (394)
.|.+....++++.+.++.|++||..+++....+..+...+ +++|+|+|++|++++. ++.|.+||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 3556667788999999999999999999888887777777 9999999997766665 88999999999987 6666666
Q ss_pred CCCEEEEEEcCCCCEEEEecCCC---eEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCc-EEEEcCCCC
Q 016187 149 GGGVEWVSWHPRGHIVLAGSEDS---TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDAT-LRVWNPKSG 223 (394)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~s~d~---~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~-i~vwd~~~~ 223 (394)
..+...++|+|++++++++..++ .|++|++.+++.+..+..+ ..+.+++|+|+|++|+++ ..++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 66655599999999988665553 8999999988877776544 456899999999866544 55688 999998754
Q ss_pred ceEEEEc-CCCCcccCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCcE---EEEeccCCCCEEEEEECCCCCeEEEEe-
Q 016187 224 ENIHVIR-GHPYHTEGLTCLTISADSTLA-LSGSKDGSVHMVNITTGKV---VSSLVSHTDSIECIGFSRSSPWAATGS- 297 (394)
Q Consensus 224 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~l-~~g~~dg~i~i~d~~~~~~---~~~~~~h~~~i~~v~~~~~~~~l~s~s- 297 (394)
..+.... ...........++++|+++++ +++..++.|.+||+.+++. +..+.. ...+..++|+|++++++.++
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEc
Confidence 4332111 000123457899999999855 4555789999999998887 766654 36678899999999776554
Q ss_pred CCCcEEEEeCCCCCccee--c-----cCC---CCEEEEEEeCCCCEEEEEeC-CCeEEEEECCCCe
Q 016187 298 MDQKLIIWDLQHSLPRST--C-----DHE---DGVTCLMWLGTSKYVVTGCV-DGKVRVWDSLSGD 352 (394)
Q Consensus 298 ~dg~i~iwd~~~~~~~~~--~-----~~~---~~v~~~~~~~~~~~l~sg~~-dg~i~iwd~~~~~ 352 (394)
.++.|.+||+.+...... . .+. .....++|+|++++|++++. ++.|++||+....
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 578899999986543111 0 011 12356899999998866554 6799999987654
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.97 E-value=6.5e-28 Score=240.44 Aligned_cols=314 Identities=12% Similarity=0.109 Sum_probs=224.9
Q ss_pred EEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeee-EeecCcc-----------------cCEEEEEEcCCCCEEEEEeCC
Q 016187 67 VYSVACSPTDATLVATGGGDDKGFFWRINQGDWA-SEIQGHK-----------------DSVSSLAFSMDGQLLASGGLD 128 (394)
Q Consensus 67 v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~-~~~~~h~-----------------~~V~~v~~s~~g~~l~t~s~d 128 (394)
++.+.|. +.. +++++.|+ | +||+.+++.+ ..+..|. ..|.+++|||| ++++.+ .+
T Consensus 28 ~~~~~w~--g~~-~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~ 100 (706)
T 2z3z_A 28 VVGLQWM--GDN-YVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQ 100 (706)
T ss_dssp CTTCEEE--TTE-EEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ET
T ss_pred CCCCcCc--CCe-EEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-EC
Confidence 3446676 344 44555666 7 9999998873 4444443 56999999999 665555 35
Q ss_pred CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCc-----cceeeeecccCcC----------
Q 016187 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-----AAYLNMFSGHGSS---------- 193 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~-----~~~~~~~~~h~~~---------- 193 (394)
+.|++||+.+++... +..+...+..++|+|+|+.|+++ .++.|++|++.+ ++..+....+...
T Consensus 101 ~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~e 178 (706)
T 2z3z_A 101 GGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQR 178 (706)
T ss_dssp TEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGG
T ss_pred CEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhh
Confidence 999999999887654 34456678889999999998885 679999999987 7655544444332
Q ss_pred ----eEEEEECCCCCeEEEEe---------------------------------CCCcEEEEcCCCCceEEEEcCCCCcc
Q 016187 194 ----VTCGDFTPDGKTICTGS---------------------------------DDATLRVWNPKSGENIHVIRGHPYHT 236 (394)
Q Consensus 194 ----v~~~~~~~~~~~l~s~~---------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~ 236 (394)
+.+++|+|||++|++++ .+..|++||+.+++...... ...+.
T Consensus 179 e~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-~~~~~ 257 (706)
T 2z3z_A 179 EFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-GEPKE 257 (706)
T ss_dssp CTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC-CSCTT
T ss_pred hcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc-CCCCc
Confidence 47889999999999987 44679999998877543322 11244
Q ss_pred cCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCcEEEEec--cCCC---CEEEEEECC--CCCeEEEEeCCCcEEE
Q 016187 237 EGLTCLTISADSTLALSGSKDG-----SVHMVNITTGKVVSSLV--SHTD---SIECIGFSR--SSPWAATGSMDQKLII 304 (394)
Q Consensus 237 ~~i~~~~~~~~~~~l~~g~~dg-----~i~i~d~~~~~~~~~~~--~h~~---~i~~v~~~~--~~~~l~s~s~dg~i~i 304 (394)
..+.+++|+|+++.+++++.++ .|++||+.+++....+. .+.. .+.++.|+| +++++++++.|+.++|
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l 337 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHL 337 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEE
Confidence 5689999999999999887765 89999999984433332 1222 346789999 9999999999999999
Q ss_pred EeCC--CCCcceeccCCCCEEE-EEEeCCCCEEEEEeC-CC----eEEEEECCCCeEEEEeecccCceeEEEEccCCCEE
Q 016187 305 WDLQ--HSLPRSTCDHEDGVTC-LMWLGTSKYVVTGCV-DG----KVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFL 376 (394)
Q Consensus 305 wd~~--~~~~~~~~~~~~~v~~-~~~~~~~~~l~sg~~-dg----~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l 376 (394)
|.+. .........+...+.. ++|+|+++.|+.++. ++ .|+.||..+++ +..+. |...+..++|+||+++|
T Consensus 338 ~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l 415 (706)
T 2z3z_A 338 YLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAI 415 (706)
T ss_dssp EEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEE
T ss_pred EEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEE
Confidence 9764 2223333455566766 799999988766554 44 67778887766 44454 67779999999999988
Q ss_pred EEEeCC----CcEEEEeccC
Q 016187 377 VSVSLD----GTARVFEIAD 392 (394)
Q Consensus 377 ~s~s~d----g~i~iw~~~~ 392 (394)
+..+.+ +.|++|++..
T Consensus 416 ~~~~~~~~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 416 IDIFQSPTVPRKVTVTNIGK 435 (706)
T ss_dssp EEEEECSSCSCEEEEEESSS
T ss_pred EEEecCCCCCcEEEEEECCC
Confidence 876443 5699999764
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=2.2e-27 Score=215.16 Aligned_cols=293 Identities=15% Similarity=0.202 Sum_probs=207.6
Q ss_pred CCcEEEEecCCCeEEEEEcC-CCe--eeEeecCcccCEEEEEEcCCCCEEEEEeCC-CcEEEEeCC--CCce--EEEEec
Q 016187 76 DATLVATGGGDDKGFFWRIN-QGD--WASEIQGHKDSVSSLAFSMDGQLLASGGLD-GLVQIWDPS--SGNL--KCTLEG 147 (394)
Q Consensus 76 ~~~~lasg~~d~~v~~w~~~-~~~--~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d-~~i~vwd~~--~~~~--~~~~~~ 147 (394)
...++++++.|+.+++|++. +++ .+.. ..|...+.+++|+|+|++|++++.+ +.|++|++. +++. +..+..
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 34567777889999999985 332 2333 3477789999999999999988876 999999987 5553 334444
Q ss_pred CCCCEEEEEEcCCCCEEEEec-CCCeEEEEeC---CccceeeeecccCcCeEEEEECCCCCeEEEEe-CCCcEEEEcCCC
Q 016187 148 PGGGVEWVSWHPRGHIVLAGS-EDSTVWMWNA---DRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKS 222 (394)
Q Consensus 148 ~~~~v~~~~~~~~~~~l~~~s-~d~~i~iw~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~ 222 (394)
+. .+..++|+|+++++++++ .++.|.+|++ ...+....+..+ ..+.+++|+|++++|++++ .++.|++||+.+
T Consensus 83 ~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 83 PG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp SS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 33 778899999999776555 5889999999 444445555444 3578899999999888777 899999999987
Q ss_pred -CceEE----EEcCCCCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEECCC--CcE--EEEec---cC---CCCEEEEEE
Q 016187 223 -GENIH----VIRGHPYHTEGLTCLTISADSTLALSG-SKDGSVHMVNITT--GKV--VSSLV---SH---TDSIECIGF 286 (394)
Q Consensus 223 -~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~g-~~dg~i~i~d~~~--~~~--~~~~~---~h---~~~i~~v~~ 286 (394)
++... .+... ....+..++++|++++++++ ..++.|.+|++.. ++. ...+. .. ...+..++|
T Consensus 161 ~~~~~~~~~~~~~~~--~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTV--EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI 238 (343)
T ss_dssp TSCEEEEEEEEEECS--TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE
T ss_pred CCceeeecccccccC--CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEE
Confidence 54322 12211 23468889999999976554 5889999999953 432 22222 11 235678999
Q ss_pred CCCCCeEE-EEeCCCcEEEEeCCC--CC--cceeccCCCCEEEEEEeCCCCEEEEEe-CCCeEEEE--ECCCCeE--EEE
Q 016187 287 SRSSPWAA-TGSMDQKLIIWDLQH--SL--PRSTCDHEDGVTCLMWLGTSKYVVTGC-VDGKVRVW--DSLSGDC--VRT 356 (394)
Q Consensus 287 ~~~~~~l~-s~s~dg~i~iwd~~~--~~--~~~~~~~~~~v~~~~~~~~~~~l~sg~-~dg~i~iw--d~~~~~~--~~~ 356 (394)
+|++++|+ ++..++.|.+|++.. .. ..........+..++|+|++++|++++ .++.|.+| |..+++. +..
T Consensus 239 s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 239 TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccc
Confidence 99998877 455789999999973 21 111222223478899999999988887 58999999 5556643 445
Q ss_pred eecccCceeEEEEccCCC
Q 016187 357 FSGHRDAIQAISVSAHQD 374 (394)
Q Consensus 357 ~~~h~~~v~~l~~~~~~~ 374 (394)
+... ....+++|.++.+
T Consensus 319 ~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 319 YAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp EECS-SSCCEEEEEEEC-
T ss_pred cccC-CCCeeEEEEcccC
Confidence 5543 3456788887644
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=1.8e-27 Score=237.31 Aligned_cols=282 Identities=13% Similarity=0.112 Sum_probs=216.1
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----C
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-----G 139 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~-----~ 139 (394)
..|.+++|+|+ +.++++. ++.+++||+.+++... +..+...+.+++|||||++|+.+ .++.|++|++.+ +
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 56999999997 6666653 5999999998887654 44567789999999999999985 689999999998 7
Q ss_pred ceEEEEecCCCC--------------EEEEEEcCCCCEEEEec---------------------------------CCCe
Q 016187 140 NLKCTLEGPGGG--------------VEWVSWHPRGHIVLAGS---------------------------------EDST 172 (394)
Q Consensus 140 ~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~s---------------------------------~d~~ 172 (394)
+.......+... +..++|+|++++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 765433333332 47899999999999887 4568
Q ss_pred EEEEeCCccceeeeec--ccCcCeEEEEECCCCCeEEEEeCCC-----cEEEEcCCCCceEEEEcC--CCCcccCeEEEE
Q 016187 173 VWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGSDDA-----TLRVWNPKSGENIHVIRG--HPYHTEGLTCLT 243 (394)
Q Consensus 173 i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~--~~~~~~~i~~~~ 243 (394)
|++||+.+++...... .|...+.+++|+|+|++|++++.++ .|++||+.+++....+.. .......+..+.
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce
Confidence 9999998877544432 4667789999999999999988776 899999998844333321 111111235678
Q ss_pred EcC--CCCEEEEEeCCCcEEEEECC-CCcEEEEeccCCCCEEE-EEECCCCCeEEEEeCC-C----cEEEEeCCCCCcce
Q 016187 244 ISA--DSTLALSGSKDGSVHMVNIT-TGKVVSSLVSHTDSIEC-IGFSRSSPWAATGSMD-Q----KLIIWDLQHSLPRS 314 (394)
Q Consensus 244 ~~~--~~~~l~~g~~dg~i~i~d~~-~~~~~~~~~~h~~~i~~-v~~~~~~~~l~s~s~d-g----~i~iwd~~~~~~~~ 314 (394)
|+| +++++++++.++.+++|.+. +++.+..+..|...+.. ++|+|+++.|+.++.+ + .|..||+.+... .
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~ 395 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT-K 395 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC-E
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc-e
Confidence 999 99999999999999999876 67777888888888876 7999999887665544 4 566677766543 3
Q ss_pred eccCCCCEEEEEEeCCCCEEEEEeCC----CeEEEEECCCCe
Q 016187 315 TCDHEDGVTCLMWLGTSKYVVTGCVD----GKVRVWDSLSGD 352 (394)
Q Consensus 315 ~~~~~~~v~~~~~~~~~~~l~sg~~d----g~i~iwd~~~~~ 352 (394)
...+...+.+++|+|++++++..+.+ +.|++||+.+++
T Consensus 396 ~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 396 DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 34467779999999999998876544 569999998887
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=4.1e-27 Score=212.84 Aligned_cols=275 Identities=11% Similarity=0.063 Sum_probs=215.0
Q ss_pred cEEEEecCCCeEEEEEcCCCeeeEeecCcc-c-CEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceEEEEecCC-----
Q 016187 78 TLVATGGGDDKGFFWRINQGDWASEIQGHK-D-SVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLKCTLEGPG----- 149 (394)
Q Consensus 78 ~~lasg~~d~~v~~w~~~~~~~~~~~~~h~-~-~V~~v~~s~~g~~l-~t~s~d~~i~vwd~~~~~~~~~~~~~~----- 149 (394)
.++++++.++.+++||+.+++.+..+.... . .+..++|+|+|+++ ++++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 468889999999999999999888776322 2 47899999999876 455667899999999998877665322
Q ss_pred CCEEEEEEcCCCCEEEEec------------CCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEE
Q 016187 150 GGVEWVSWHPRGHIVLAGS------------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (394)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~s------------~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~v 217 (394)
..+..++|+|+++++++++ .++.|++||+.+++.+..+.. ...+.+++|+|++++|+++ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 1466789999999888876 579999999998877766654 4456788999999988888 689999
Q ss_pred EcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC------------------------cEEEEECCCCcEE-E
Q 016187 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG------------------------SVHMVNITTGKVV-S 272 (394)
Q Consensus 218 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg------------------------~i~i~d~~~~~~~-~ 272 (394)
||+.+++....+..... ..+ +.++|++..++..+..+ .|.+||+.+++.. .
T Consensus 159 ~d~~~~~~~~~~~~~~~-~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSW-EAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp EETTTTEEEEEECSTTT-TTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred EECCCCcEeeeeecccc-CCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 99999887766654321 112 25788887665544332 4689999998764 2
Q ss_pred EeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCe
Q 016187 273 SLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGD 352 (394)
Q Consensus 273 ~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~ 352 (394)
.+..+...+.+++|+|++.+++++ ++.|.+||+.+............+.+++|+|++++|++++.++.|++||+.+++
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 344566778899999999999888 799999999876554444445567899999999999999999999999999999
Q ss_pred EEEEeeccc
Q 016187 353 CVRTFSGHR 361 (394)
Q Consensus 353 ~~~~~~~h~ 361 (394)
.+..+..+.
T Consensus 313 ~~~~~~~~~ 321 (337)
T 1pby_B 313 KKGQVDLPG 321 (337)
T ss_dssp EEEEEECGG
T ss_pred EEEEEEcCC
Confidence 998887554
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=4.8e-28 Score=242.62 Aligned_cols=281 Identities=10% Similarity=0.135 Sum_probs=218.1
Q ss_pred ccCEEEEEEcCCCCEEEEEeC-CC-----cEEEEeCCCCceEEEEecCCC------------------------CEEEEE
Q 016187 107 KDSVSSLAFSMDGQLLASGGL-DG-----LVQIWDPSSGNLKCTLEGPGG------------------------GVEWVS 156 (394)
Q Consensus 107 ~~~V~~v~~s~~g~~l~t~s~-d~-----~i~vwd~~~~~~~~~~~~~~~------------------------~v~~~~ 156 (394)
...|.+++|||||++|++++. |+ .|++||+.+++....+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456999999999999999998 88 899999999987766654332 277899
Q ss_pred EcCCCCEEEEecCCCeEEEEeCCccc--eeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCC
Q 016187 157 WHPRGHIVLAGSEDSTVWMWNADRAA--YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY 234 (394)
Q Consensus 157 ~~~~~~~l~~~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 234 (394)
|+|++++|++++. +.|++|++.++. ....+..|...+.+++|+|||++|+.++ ++.|++||+.+++..........
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999988886 999999998872 3455667888899999999999999887 46899999988765443222110
Q ss_pred c-------------ccCeEEEEEcCCCCEEEEEeCCC---------------------------------cEEEEECCC-
Q 016187 235 H-------------TEGLTCLTISADSTLALSGSKDG---------------------------------SVHMVNITT- 267 (394)
Q Consensus 235 ~-------------~~~i~~~~~~~~~~~l~~g~~dg---------------------------------~i~i~d~~~- 267 (394)
. ...+..+.|+|||++|++++.|+ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 0 00146789999999999987765 789999988
Q ss_pred CcEEEEec--cCCCCEEEEEECCCCCeEEEEeC-----CCcEEEEeCCCCCcceecc-CCC----CEEEEEEeCCCCEEE
Q 016187 268 GKVVSSLV--SHTDSIECIGFSRSSPWAATGSM-----DQKLIIWDLQHSLPRSTCD-HED----GVTCLMWLGTSKYVV 335 (394)
Q Consensus 268 ~~~~~~~~--~h~~~i~~v~~~~~~~~l~s~s~-----dg~i~iwd~~~~~~~~~~~-~~~----~v~~~~~~~~~~~l~ 335 (394)
++...... .|...+..++| |++++|+.++. +..|.+||+.+........ +.. .+..++|+|++++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 352 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILW 352 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEE
Confidence 77554332 47778999999 99999987654 5679999998765544332 221 345789999999999
Q ss_pred EEeCCCeEEEEECC-CCeEEEEeecccCceeEE-EEccCCCEEE-EEeCCC--cEEEEecc
Q 016187 336 TGCVDGKVRVWDSL-SGDCVRTFSGHRDAIQAI-SVSAHQDFLV-SVSLDG--TARVFEIA 391 (394)
Q Consensus 336 sg~~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l-~~~~~~~~l~-s~s~dg--~i~iw~~~ 391 (394)
+++.+|.++||.+. +++ ...+..|...|..+ .|+|+++.|+ +++.++ .+++|++.
T Consensus 353 ~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 353 SSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp EECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred EecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 99999988887654 455 77888888889887 5999999775 455555 89999875
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=3.7e-26 Score=208.13 Aligned_cols=276 Identities=12% Similarity=0.092 Sum_probs=217.8
Q ss_pred cCCcEEEEEEcCCCCcEEEEecC------CCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEE-EEeCCCcEEEEe
Q 016187 63 HSDEVYSVACSPTDATLVATGGG------DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWD 135 (394)
Q Consensus 63 h~~~v~~~~~~p~~~~~lasg~~------d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~-t~s~d~~i~vwd 135 (394)
....++.++++|++..++++... ++.+.+||..+++.+..+.. ...+..++|+|+|++++ +...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 34578899999976665555433 67899999999988887764 34478899999999655 555679999999
Q ss_pred CCCCceEEEEecCCCC---------EEEEEEcCCCCEEEEec--CCCeEEEEeCCccceeeeecccCcCeEEEEECCCCC
Q 016187 136 PSSGNLKCTLEGPGGG---------VEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (394)
Q Consensus 136 ~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~s--~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 204 (394)
..+++.+..+..+... +..++|+|+++.+++++ .++.|++||..+++.+..+..+...+.+++|+|+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 9999988777654322 68899999999776665 578999999999888887775666678899999999
Q ss_pred eEEEEeCCCcEEEEcCCCCceEEEEcCCC-CcccCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCcEEEEeccCCCCEE
Q 016187 205 TICTGSDDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISADSTLALSGSK-DGSVHMVNITTGKVVSSLVSHTDSIE 282 (394)
Q Consensus 205 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~h~~~i~ 282 (394)
+|++++.++.|.+||+.+++....+.... .+...+..++++|+++++++++. ++.|.+||+.+++.+..+.... ..
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~ 275 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SL 275 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CC
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--Cc
Confidence 99999999999999999998777665422 13445788999999997766654 5999999999999887776543 25
Q ss_pred EEEECCCCCeEEEEe-CCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCC
Q 016187 283 CIGFSRSSPWAATGS-MDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDG 341 (394)
Q Consensus 283 ~v~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg 341 (394)
.++|+|++.+++.++ .++.|.+||+.+............+.+++|+|++++|+.+..++
T Consensus 276 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred eEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 689999999655554 68999999998776555555556789999999999887776554
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=9.5e-26 Score=205.40 Aligned_cols=271 Identities=13% Similarity=0.084 Sum_probs=214.5
Q ss_pred cccCEEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEE-EEecCCCeEEEEe
Q 016187 106 HKDSVSSLAFSMDGQLLASGGL-------DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWN 177 (394)
Q Consensus 106 h~~~V~~v~~s~~g~~l~t~s~-------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~s~d~~i~iw~ 177 (394)
....+..++|+|+|+++++++. ++.|.+||..+++....+... ..+..++|+|+++.+ ++...++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456889999999999888874 568999999999988777643 346778999999854 5566689999999
Q ss_pred CCccceeeeecccCcC---------eEEEEECCCCCeEEEEe--CCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC
Q 016187 178 ADRAAYLNMFSGHGSS---------VTCGDFTPDGKTICTGS--DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA 246 (394)
Q Consensus 178 ~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (394)
..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++....+... ...+..+.++|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~s~ 194 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT---GKMSTGLALDS 194 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC---CTTCCCCEEET
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC---CCccceEEECC
Confidence 9998877776654322 68899999999887765 4789999999999887776522 23466789999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEecc----CCCCEEEEEECCCCCeEEEEeC-CCcEEEEeCCCCCcceeccCCCC
Q 016187 247 DSTLALSGSKDGSVHMVNITTGKVVSSLVS----HTDSIECIGFSRSSPWAATGSM-DQKLIIWDLQHSLPRSTCDHEDG 321 (394)
Q Consensus 247 ~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~----h~~~i~~v~~~~~~~~l~s~s~-dg~i~iwd~~~~~~~~~~~~~~~ 321 (394)
+++++++++.++.|.+||+.+++.+..+.. +...+..++|+|++.+++.++. ++.|.+||+.+............
T Consensus 195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 274 (353)
T 3vgz_A 195 EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES 274 (353)
T ss_dssp TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 999999999999999999999998877654 4556888999999997766655 59999999987654443332222
Q ss_pred EEEEEEeCCCCEEEEEe-CCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCC
Q 016187 322 VTCLMWLGTSKYVVTGC-VDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLD 382 (394)
Q Consensus 322 v~~~~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d 382 (394)
..++|+|+++++++++ .++.|.+||..+++.+..+.... .+..++|+|++++|+.+..+
T Consensus 275 -~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 275 -LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEEC
T ss_pred -ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEcc
Confidence 5689999999766555 68999999999999998887644 67899999999976665554
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=5.6e-27 Score=207.57 Aligned_cols=253 Identities=13% Similarity=0.097 Sum_probs=195.5
Q ss_pred EEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCC-CceEEEEecC-CCCEEEEEEc
Q 016187 81 ATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSS-GNLKCTLEGP-GGGVEWVSWH 158 (394)
Q Consensus 81 asg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~-~~~~~~~~~~-~~~v~~~~~~ 158 (394)
.+++.|+++++||+.+++.. .+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......+ ...+.+++|+
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp --CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 45678999999999988866 4556899999999999999999887 78999999998 8776655555 3677889999
Q ss_pred CCCCEEEEec--CC--CeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEE-EEeCCCcEEEEcC--CCCceEEEEcC
Q 016187 159 PRGHIVLAGS--ED--STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTIC-TGSDDATLRVWNP--KSGENIHVIRG 231 (394)
Q Consensus 159 ~~~~~l~~~s--~d--~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~--~~~~~~~~~~~ 231 (394)
|++++|++++ .+ ..|+.|+..+++ ...+..+. .+.+++|+|++++|+ +++.++.+++|++ .+++ ...+..
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 170 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTH 170 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCC
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEccc
Confidence 9999999888 33 445555555554 33333333 488899999999887 7888999999985 3333 333332
Q ss_pred CCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEECC-CCcEEEEeccCCCCEEEEEECCCCCeEEEEeCC----------
Q 016187 232 HPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNIT-TGKVVSSLVSHTDSIECIGFSRSSPWAATGSMD---------- 299 (394)
Q Consensus 232 ~~~~~~~i~~~~~~~~~~~l~~g~-~dg~i~i~d~~-~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~d---------- 299 (394)
+...+.++.|+|+++.++.++ .++.+++|++. .+..+..+..|...+.+++|+|++.+|++++.+
T Consensus 171 ---~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 171 ---GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp ---SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred ---CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 445789999999999877665 58999999886 455667777888889999999999999888766
Q ss_pred -CcEEEEeCCCCCcceec---cCCCCEEEEEEeCCCCEEEEEeCCC
Q 016187 300 -QKLIIWDLQHSLPRSTC---DHEDGVTCLMWLGTSKYVVTGCVDG 341 (394)
Q Consensus 300 -g~i~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~sg~~dg 341 (394)
+.|.+||+......... .|...+.++.|+|++++|++++.+.
T Consensus 248 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 248 DVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 56999999876543322 5677888999999999998887653
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=6.8e-26 Score=204.77 Aligned_cols=264 Identities=9% Similarity=0.029 Sum_probs=206.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecCCC--CEEEEEEcCCCCEE-EEecCCCeEEEEeCCccceeeeecc-c----C
Q 016187 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGPGG--GVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSG-H----G 191 (394)
Q Consensus 120 ~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~s~d~~i~iw~~~~~~~~~~~~~-h----~ 191 (394)
++|++++.++.|++||+.+++.+..+..... .+..++|+|+++.+ ++++.++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999988877764332 47789999999755 5666789999999998877665542 2 2
Q ss_pred cCeEEEEECCCCCeEEEEe------------CCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCc
Q 016187 192 SSVTCGDFTPDGKTICTGS------------DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGS 259 (394)
Q Consensus 192 ~~v~~~~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~ 259 (394)
..+.+++|+|+|++|++++ .++.|.+||+.+++.+..+.. ...+..+.++|++++++++ ++.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~--~~~ 155 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA----PRQITMLAWARDGSKLYGL--GRD 155 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC----CSSCCCEEECTTSSCEEEE--SSS
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC----CCCcceeEECCCCCEEEEe--CCe
Confidence 2567889999999998886 579999999998887766653 2346678899999988887 689
Q ss_pred EEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCC------------------------cEEEEeCCCCCcce-
Q 016187 260 VHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQ------------------------KLIIWDLQHSLPRS- 314 (394)
Q Consensus 260 i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg------------------------~i~iwd~~~~~~~~- 314 (394)
|.+||+.+++.+..+..+... ..+.|+|++.+++..+..+ .|.+||+.+.....
T Consensus 156 i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp EEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred EEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 999999999888777654311 1237899988665544332 46899988765431
Q ss_pred -eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 315 -TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 315 -~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
...+...+.+++|+|++++|+++ ++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++.++.|++|++...
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 12345568889999999999988 799999999999988887754 45789999999999999999999999998764
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=8.1e-26 Score=204.81 Aligned_cols=264 Identities=14% Similarity=0.203 Sum_probs=191.1
Q ss_pred EEEEEeCCCcEEEEeCC-CCce--EEEEecCCCCEEEEEEcCCCCEEEEecCC-CeEEEEeCC--ccc--eeeeecccCc
Q 016187 121 LLASGGLDGLVQIWDPS-SGNL--KCTLEGPGGGVEWVSWHPRGHIVLAGSED-STVWMWNAD--RAA--YLNMFSGHGS 192 (394)
Q Consensus 121 ~l~t~s~d~~i~vwd~~-~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~s~d-~~i~iw~~~--~~~--~~~~~~~h~~ 192 (394)
.+++++.|+.|++|++. +++. ... ..+...+..++|+|++++|++++.+ +.+.+|++. +++ .+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-
Confidence 34455789999999985 3432 222 3456678889999999988887776 999999987 443 333444444
Q ss_pred CeEEEEECCCCCeEEEEeC-CCcEEEEcCCCC---ceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEECCC
Q 016187 193 SVTCGDFTPDGKTICTGSD-DATLRVWNPKSG---ENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITT 267 (394)
Q Consensus 193 ~v~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-~dg~i~i~d~~~ 267 (394)
.+..++|+|++++|++++. ++.|++||+..+ +....+.. ...+.+++|+|+++++++++ .++.|++||+.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 160 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG----LDGCHSANISPDNRTLWVPALKQDRICLFTVSD 160 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC----CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC----CCCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence 7788999999998876654 889999999433 33333332 23477889999999888777 899999999987
Q ss_pred -CcEEE----Eecc-CCCCEEEEEECCCCCeEEEE-eCCCcEEEEeCCC--CCcc--e-ec----c--CCCCEEEEEEeC
Q 016187 268 -GKVVS----SLVS-HTDSIECIGFSRSSPWAATG-SMDQKLIIWDLQH--SLPR--S-TC----D--HEDGVTCLMWLG 329 (394)
Q Consensus 268 -~~~~~----~~~~-h~~~i~~v~~~~~~~~l~s~-s~dg~i~iwd~~~--~~~~--~-~~----~--~~~~v~~~~~~~ 329 (394)
++... .+.. ....+..++|+|++.+++.+ ..++.+.+|++.. .... . .. . ....+..++|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP 240 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC
Confidence 65432 2222 34578899999999977555 4889999999853 2111 1 11 1 123567899999
Q ss_pred CCCEEEE-EeCCCeEEEEECC--C--CeEEEEeecccCceeEEEEccCCCEEEEEe-CCCcEEEEecc
Q 016187 330 TSKYVVT-GCVDGKVRVWDSL--S--GDCVRTFSGHRDAIQAISVSAHQDFLVSVS-LDGTARVFEIA 391 (394)
Q Consensus 330 ~~~~l~s-g~~dg~i~iwd~~--~--~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~i~iw~~~ 391 (394)
++++|++ +..++.|++|++. + .+.+..+..+.. +..++|+|++++|++++ .++.|++|+++
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9998875 4579999999987 3 345556665554 88999999999888877 68999999664
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.6e-26 Score=204.63 Aligned_cols=252 Identities=15% Similarity=0.177 Sum_probs=196.4
Q ss_pred EEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCc-cceeeeeccc-CcCeEEEEECC
Q 016187 124 SGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR-AAYLNMFSGH-GSSVTCGDFTP 201 (394)
Q Consensus 124 t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~-~~~~~~~~~h-~~~v~~~~~~~ 201 (394)
+++.|++|++||+.+++... +..+...+.+++|+|++++|++++ ++.|++|++.+ ++......++ ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 44678999999999887664 445778899999999999998876 78999999998 7776666666 36788899999
Q ss_pred CCCeEEEEe--CCCcEEEE--cCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEE-EEeCCCcEEEEEC--CCCcEEEEe
Q 016187 202 DGKTICTGS--DDATLRVW--NPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKDGSVHMVNI--TTGKVVSSL 274 (394)
Q Consensus 202 ~~~~l~s~~--~dg~i~vw--d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~g~~dg~i~i~d~--~~~~~~~~~ 274 (394)
++++|++++ .++..+|| +..+++ ...+.. ...+..+.|+|+++.++ +++.++.+++|++ .+++ ...+
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~----~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~ 168 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK----NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRL 168 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS----SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEEC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec----CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEc
Confidence 999999998 33455555 445444 233332 23488899999999877 7888999999985 3444 4566
Q ss_pred ccCCCCEEEEEECCCCCeEEEEe-CCCcEEEEeCC--CCCcceeccCCCCEEEEEEeCCCCEEEEEeCC-----------
Q 016187 275 VSHTDSIECIGFSRSSPWAATGS-MDQKLIIWDLQ--HSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVD----------- 340 (394)
Q Consensus 275 ~~h~~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d----------- 340 (394)
..+...+.++.|+|++++++.++ .++.+++|++. .........+...+.++.|+|++++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 67888999999999999887766 58999999874 33333444566678899999999999988866
Q ss_pred CeEEEEECCCCeE--EEEeecccCceeEEEEccCCCEEEEEeCCC
Q 016187 341 GKVRVWDSLSGDC--VRTFSGHRDAIQAISVSAHQDFLVSVSLDG 383 (394)
Q Consensus 341 g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg 383 (394)
+.|++||+.+++. +..+.+|...+..++|+|++++|++++.+.
T Consensus 249 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred eEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988865 445558888999999999999999887664
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=2.6e-27 Score=236.65 Aligned_cols=281 Identities=10% Similarity=0.087 Sum_probs=209.4
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCC---CEEEEEEcCCCCEEEEecCC---------CeEEEE
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGG---GVEWVSWHPRGHIVLAGSED---------STVWMW 176 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~s~d---------~~i~iw 176 (394)
.+.+++|+|||+++++ +.|++|++||+.+++....+..+.. .+..++|+|++++|++++.+ +.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4678999999998876 7899999999999988777776654 48999999999999988764 788899
Q ss_pred eCCccce--eeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCc---------------ccCe
Q 016187 177 NADRAAY--LNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYH---------------TEGL 239 (394)
Q Consensus 177 ~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~---------------~~~i 239 (394)
|+.+++. +....+|...+..++|+|||++|+.++. +.|++||+.+++.......+... ...+
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9988765 2222345555788999999999999886 79999999988766554432110 0123
Q ss_pred EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEECCCCcEEEEeccC------CC
Q 016187 240 TCLTISADSTLALSGSKDG----------------------------------SVHMVNITTGKVVSSLVSH------TD 279 (394)
Q Consensus 240 ~~~~~~~~~~~l~~g~~dg----------------------------------~i~i~d~~~~~~~~~~~~h------~~ 279 (394)
.++.|+|||+.|++++.++ .|++||+.+++....+..+ ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 7899999999999887543 7999999988765556544 56
Q ss_pred CEEEEEECCCCCeEEEEeC----CCcEEEEeCCCCCcceec--cCCCCE----EEEEEeCCCCEEEE--EeCCC------
Q 016187 280 SIECIGFSRSSPWAATGSM----DQKLIIWDLQHSLPRSTC--DHEDGV----TCLMWLGTSKYVVT--GCVDG------ 341 (394)
Q Consensus 280 ~i~~v~~~~~~~~l~s~s~----dg~i~iwd~~~~~~~~~~--~~~~~v----~~~~~~~~~~~l~s--g~~dg------ 341 (394)
.+..++|+|+++++++.+. +..|.+||+.+....... .+...+ ..++|+|++++|+. +..++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 335 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY 335 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCccee
Confidence 7899999999998877643 357999999876544332 222323 37799999997775 45667
Q ss_pred eEEEEE-CCCCe--EEEEeecccCceeE-EEEccCCCEEEEEeCC---CcEEEEecc
Q 016187 342 KVRVWD-SLSGD--CVRTFSGHRDAIQA-ISVSAHQDFLVSVSLD---GTARVFEIA 391 (394)
Q Consensus 342 ~i~iwd-~~~~~--~~~~~~~h~~~v~~-l~~~~~~~~l~s~s~d---g~i~iw~~~ 391 (394)
.|++|| ..+++ +...+..+...+.. ++|+||++.|+..+.+ +.+++|++.
T Consensus 336 ~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 336 HITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp EEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred EEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 577788 34444 15566644444544 6999999999866655 889999875
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=231.14 Aligned_cols=319 Identities=11% Similarity=0.076 Sum_probs=224.8
Q ss_pred EEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCccc---CEEEEEEcCCCCEEEEEeC---------CCcEEEEeC
Q 016187 69 SVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKD---SVSSLAFSMDGQLLASGGL---------DGLVQIWDP 136 (394)
Q Consensus 69 ~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~---~V~~v~~s~~g~~l~t~s~---------d~~i~vwd~ 136 (394)
.++|+|++ .+++++ .|+++++|++.+++....+.+|.. .|.+++|||||++|+.++. ++.|++||+
T Consensus 20 ~~~~s~dg-~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQ-EYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSS-EEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCC-eEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 56899965 666654 699999999999988777776654 4899999999999998876 789999999
Q ss_pred CCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee-cccCcCe-----------------EEEE
Q 016187 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF-SGHGSSV-----------------TCGD 198 (394)
Q Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~-~~h~~~v-----------------~~~~ 198 (394)
.+++.+.... ....+..++|+|+|+.|+.++ ++.|++|++.+++..+.. .++...+ .+++
T Consensus 98 ~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 98 SNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 9887621011 124578899999999988875 789999999877654432 2332222 4789
Q ss_pred ECCCCCeEEEEeCCC----------------------------------cEEEEcCCCCceE--EEEcC---CCCcccCe
Q 016187 199 FTPDGKTICTGSDDA----------------------------------TLRVWNPKSGENI--HVIRG---HPYHTEGL 239 (394)
Q Consensus 199 ~~~~~~~l~s~~~dg----------------------------------~i~vwd~~~~~~~--~~~~~---~~~~~~~i 239 (394)
|+|||++|++++.|. .|++||+.+++.. ..+.. ...+...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999999999987652 7889999877642 11111 01244568
Q ss_pred EEEEEcCCCCEEEEEeCC----CcEEEEE----CCCCcEEEEe----ccCCCCEE-----EEEECCCCCeEEE--EeCCC
Q 016187 240 TCLTISADSTLALSGSKD----GSVHMVN----ITTGKVVSSL----VSHTDSIE-----CIGFSRSSPWAAT--GSMDQ 300 (394)
Q Consensus 240 ~~~~~~~~~~~l~~g~~d----g~i~i~d----~~~~~~~~~~----~~h~~~i~-----~v~~~~~~~~l~s--~s~dg 300 (394)
..++|+||++++++.... ..|.+|| +.+++....+ ..|...+. .+.|+|+++.++. ...+|
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g 335 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG 335 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS
T ss_pred EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC
Confidence 899999998877774432 2488899 7777654333 35666676 7899999996554 44555
Q ss_pred --cEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCC--Ce-EEEEee----cccCceeE
Q 016187 301 --KLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVD-----GKVRVWDSLS--GD-CVRTFS----GHRDAIQA 366 (394)
Q Consensus 301 --~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~iwd~~~--~~-~~~~~~----~h~~~v~~ 366 (394)
.|.+||+..........+...+..+.++ +++.|+..+.+ +.+++|.+.. +. ....+. +|...+..
T Consensus 336 ~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 414 (719)
T 1z68_A 336 YKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYT 414 (719)
T ss_dssp CEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEE
T ss_pred ceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEE
Confidence 4667787665544444455567777777 77777766654 7888887643 42 233443 36677889
Q ss_pred EEEccCCCEEEE-EeCC--CcEEEEeccC
Q 016187 367 ISVSAHQDFLVS-VSLD--GTARVFEIAD 392 (394)
Q Consensus 367 l~~~~~~~~l~s-~s~d--g~i~iw~~~~ 392 (394)
+.|+|++++++. ++.. ..+.+|++.+
T Consensus 415 ~~~s~dg~~l~~~~s~~~~p~~~l~d~~~ 443 (719)
T 1z68_A 415 ASFSDYAKYYALVCYGPGIPISTLHDGRT 443 (719)
T ss_dssp EEECGGGSSEEEEECCBSSCEEEEECSSS
T ss_pred EEECCCCCEEEEEcCCCCCCeEEEEECCC
Confidence 999999987774 4443 4677887643
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=1.5e-24 Score=197.02 Aligned_cols=284 Identities=10% Similarity=0.013 Sum_probs=200.3
Q ss_pred EEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcc-cCEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCceEEEEec
Q 016187 70 VACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHK-DSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKCTLEG 147 (394)
Q Consensus 70 ~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~-~~V~~v~~s~~g~~l~-t~s~d~~i~vwd~~~~~~~~~~~~ 147 (394)
+++++ ++.++++++.+++|++||..+++.+..+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++....+..
T Consensus 5 ~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 5 PALKA-GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCT-TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred ccccC-CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45666 56788999999999999999999888776543 2578999999998665 555789999999999988776664
Q ss_pred CC------CCEEEEEEcCCCCEEEEecCC------------CeEEEEeCCccce---eeeecccCcCeEEEEECCCCCeE
Q 016187 148 PG------GGVEWVSWHPRGHIVLAGSED------------STVWMWNADRAAY---LNMFSGHGSSVTCGDFTPDGKTI 206 (394)
Q Consensus 148 ~~------~~v~~~~~~~~~~~l~~~s~d------------~~i~iw~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~l 206 (394)
.. ..+..++|+|+++++++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+|+ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-E
Confidence 32 226779999999999888865 8999999987543 23333 334578899999999 5
Q ss_pred EEEeCCCcEEEEcCCCCceEEEEcCCCCcc-----------------c----CeEEEEEcCCCCEEEEEeC-CCcEEEEE
Q 016187 207 CTGSDDATLRVWNPKSGENIHVIRGHPYHT-----------------E----GLTCLTISADSTLALSGSK-DGSVHMVN 264 (394)
Q Consensus 207 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----------------~----~i~~~~~~~~~~~l~~g~~-dg~i~i~d 264 (394)
+.++. .|.+||+.+++....+....... . ....+.+++++........ ...+..++
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 55543 49999999988776664321000 0 2234555554321100000 01122244
Q ss_pred CCCCcEE-EEeccCCCCEEEEEECC-CCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCe
Q 016187 265 ITTGKVV-SSLVSHTDSIECIGFSR-SSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGK 342 (394)
Q Consensus 265 ~~~~~~~-~~~~~h~~~i~~v~~~~-~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~ 342 (394)
+.+++.. ..+..+...+..++++| ++.+++++ ++.|.+||+.+............+.+++|+|++++|++++.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSE
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCe
Confidence 4444321 11223556788999999 99999888 88999999987655444444455778999999999999988999
Q ss_pred EEEEECCCCeEEEEeecc
Q 016187 343 VRVWDSLSGDCVRTFSGH 360 (394)
Q Consensus 343 i~iwd~~~~~~~~~~~~h 360 (394)
|++||..+++.+..+...
T Consensus 318 v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 318 LAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEETTTTEEEEEEECS
T ss_pred EEEEeccccceeeeeecC
Confidence 999999999999888754
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=2e-25 Score=217.61 Aligned_cols=270 Identities=13% Similarity=0.068 Sum_probs=201.3
Q ss_pred CCcEEEEEEcCCCCcEEEEecC-CCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeC---CCcEEEEeCCC-
Q 016187 64 SDEVYSVACSPTDATLVATGGG-DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL---DGLVQIWDPSS- 138 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~-d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~---d~~i~vwd~~~- 138 (394)
..+|++++|+|+ ++.||+++. |++++||++..++.......+...|.+++|||| +++++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~D-G~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVD-GDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCC-CCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 558999999995 556777766 999999999777765544444468999999999 78887775 45566655432
Q ss_pred --CceEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCC---
Q 016187 139 --GNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD--- 212 (394)
Q Consensus 139 --~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d--- 212 (394)
+... .+.. ...+...+|+|+++ .+++.+.++.+.+|++.+++..+....+. .+++|+|||++|++++.+
T Consensus 99 ~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 99 RPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp STTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT
T ss_pred CCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC
Confidence 3222 3332 23455678899886 33444444555599998877655444333 688999999999988877
Q ss_pred -CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCcEEEEeccCCCCEEEEE----
Q 016187 213 -ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG--SVHMVNITTGKVVSSLVSHTDSIECIG---- 285 (394)
Q Consensus 213 -g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg--~i~i~d~~~~~~~~~~~~h~~~i~~v~---- 285 (394)
+.|++||+.+++.. .+.. +...+..++|+|||+.++++..++ .|++||+.+++.. .+..|...+..+.
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~---~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDS---GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEEEEEETTTCCCE-EECC---SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred CeEEEEEcCCCCCce-Eeec---CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 78999999887754 4443 345578999999999999888888 8999999998877 7777777777777
Q ss_pred ----ECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCe---EEEEECCC
Q 016187 286 ----FSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGK---VRVWDSLS 350 (394)
Q Consensus 286 ----~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~---i~iwd~~~ 350 (394)
|+|++.++++++.++++++|++ ..... .....+.+++|+ +++++++++.+.. +++|+...
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 9999999999999999999999 22211 334568899999 9999998887754 77777643
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=2.7e-24 Score=195.35 Aligned_cols=264 Identities=11% Similarity=0.085 Sum_probs=197.4
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-CCEEEEEEcCCCCEE-EEecCCCeEEEEeCCccceeeeecc
Q 016187 112 SLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPG-GGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSG 189 (394)
Q Consensus 112 ~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~s~d~~i~iw~~~~~~~~~~~~~ 189 (394)
.+++++++.++++++.+++|++||+.+++.+..+..+. ..+..++|+|+++.+ ++...++.|++||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45788889999999999999999999998887776543 256789999999855 5666789999999998877665543
Q ss_pred c------CcCeEEEEECCCCCeEEEEeCC------------CcEEEEcCCCCce---EEEEcCCCCcccCeEEEEEcCCC
Q 016187 190 H------GSSVTCGDFTPDGKTICTGSDD------------ATLRVWNPKSGEN---IHVIRGHPYHTEGLTCLTISADS 248 (394)
Q Consensus 190 h------~~~v~~~~~~~~~~~l~s~~~d------------g~i~vwd~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~ 248 (394)
+ ...+..++|+|+|++|++++.+ +.|.+||+.+++. +..... ...+.+++++|++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~s~dg 159 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM----PRQVYLMRAADDG 159 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC----CSSCCCEEECTTS
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC----CCcccceeECCCC
Confidence 2 2236788999999999988865 8999999987543 223222 2357788999999
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEeccCCC------------------------CEEEEEECCCCC-----------eE
Q 016187 249 TLALSGSKDGSVHMVNITTGKVVSSLVSHTD------------------------SIECIGFSRSSP-----------WA 293 (394)
Q Consensus 249 ~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~------------------------~i~~v~~~~~~~-----------~l 293 (394)
+ +++++. .|.+||+.+++.+..+..+.. ....+++++++. ++
T Consensus 160 ~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 160 S-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp C-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred c-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 9 555543 499999999988877654320 234566665432 12
Q ss_pred EEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccC
Q 016187 294 ATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLG-TSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAH 372 (394)
Q Consensus 294 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~ 372 (394)
.....++++++|++. .+...+..++++| ++++++++ ++.|++||+.+++.++.+... ..+.+++|+|+
T Consensus 237 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~d 305 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFA--------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKK 305 (349)
T ss_dssp EEETTTCCEEEEEEE--------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSS
T ss_pred EEeccCCcEEecccc--------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCC
Confidence 233344555555542 1345678899999 99999988 899999999999998887743 35789999999
Q ss_pred CCEEEEEeCCCcEEEEeccCC
Q 016187 373 QDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 373 ~~~l~s~s~dg~i~iw~~~~~ 393 (394)
+++|++++.++.|++|++.+.
T Consensus 306 g~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 306 GDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp SSCEEEESBSSEEEEEETTTT
T ss_pred CCEEEEecCCCeEEEEecccc
Confidence 999888888999999998764
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.94 E-value=2.2e-25 Score=217.23 Aligned_cols=266 Identities=13% Similarity=0.082 Sum_probs=197.9
Q ss_pred cccCEEEEEEcCCCCEEEEEeC-CCcEEEEeCCCCceEEEEecCC-CCEEEEEEcCCCCEEEEecC---CCeEEEE--eC
Q 016187 106 HKDSVSSLAFSMDGQLLASGGL-DGLVQIWDPSSGNLKCTLEGPG-GGVEWVSWHPRGHIVLAGSE---DSTVWMW--NA 178 (394)
Q Consensus 106 h~~~V~~v~~s~~g~~l~t~s~-d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~---d~~i~iw--~~ 178 (394)
+..+|++++|+|||++||.++. |++++||++.+++.. .+..+. ..+..++|+|+ +++++++. +....+| +.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 3568999999999999999887 999999998666554 444444 57899999999 77777664 4545555 44
Q ss_pred --CccceeeeecccCcCeEEEEECCCCCe--EEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEE
Q 016187 179 --DRAAYLNMFSGHGSSVTCGDFTPDGKT--ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (394)
Q Consensus 179 --~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g 254 (394)
.... . .+.... .....+|+|+|+. +++++. +.+.+||+.+++........ . .++.++|||++++++
T Consensus 98 ~~~g~~-~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~~~~----~--~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 98 SRPGEE-Q-RLEAVK-PMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELARLP----G--FGFVSDIRGDLIAGL 167 (582)
T ss_dssp TSTTCC-E-ECTTSC-SBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEEEES----S--CEEEEEEETTEEEEE
T ss_pred cCCCcc-c-cccCCC-CceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEeecCC----C--ceEEECCCCCEEEEE
Confidence 3222 2 222221 2335578888753 444444 44559999888654443321 1 678999999999988
Q ss_pred eCC----CcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCC--cEEEEeCCCCCcceeccCCCCEEEEE--
Q 016187 255 SKD----GSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQ--KLIIWDLQHSLPRSTCDHEDGVTCLM-- 326 (394)
Q Consensus 255 ~~d----g~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~-- 326 (394)
+.+ +.|++||+.+++.. .+..|...+..++|+|++++|++++.++ +|++||+.+........|...+..++
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPT 246 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCS
T ss_pred EEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhc
Confidence 777 78999999888754 6778888999999999999999888898 89999998776553344555555556
Q ss_pred ------EeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCc---EEEEec
Q 016187 327 ------WLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGT---ARVFEI 390 (394)
Q Consensus 327 ------~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~---i~iw~~ 390 (394)
|+|++.++++++.+|.+++|++ ++++. ...+.|.+++|+ +++++++++.+.+ +.+|+.
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 9999999999999999999999 76654 334678999999 9999999887754 555554
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=1e-23 Score=191.89 Aligned_cols=263 Identities=11% Similarity=0.155 Sum_probs=184.9
Q ss_pred CCcEEEEe--CCCCceEE-EEecCCCCEEEEEEcCCCCEEEEecC---CCeEEEEeCCccc--eeeeecccCcCeEEEEE
Q 016187 128 DGLVQIWD--PSSGNLKC-TLEGPGGGVEWVSWHPRGHIVLAGSE---DSTVWMWNADRAA--YLNMFSGHGSSVTCGDF 199 (394)
Q Consensus 128 d~~i~vwd--~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~---d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~ 199 (394)
++.|.+|. ..+++... ....+...+.+++|+|+++ |++++. ++.|++|++.++. .+..+..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 45566665 45565533 2233445677899999999 555443 6899999996554 34444557778889999
Q ss_pred CCCCCeEEEEe-CCCcEEEEcCCCCce---EEEEcCCC------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CC
Q 016187 200 TPDGKTICTGS-DDATLRVWNPKSGEN---IHVIRGHP------YHTEGLTCLTISADSTLALSGSKDGSVHMVNIT-TG 268 (394)
Q Consensus 200 ~~~~~~l~s~~-~dg~i~vwd~~~~~~---~~~~~~~~------~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~-~~ 268 (394)
+|+|++|++++ .++.|++|++..... +..+.... .....+.+++++|++++++++..++.|++|++. ++
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 99999888887 789999999863222 22222110 012347889999999977777788999999998 55
Q ss_pred cEE--EEeccC-CCCEEEEEECCCCCeEEE-EeCCCcEEEEeCCC--CCcc---eeccCC------CCEEEEEEeCCCCE
Q 016187 269 KVV--SSLVSH-TDSIECIGFSRSSPWAAT-GSMDQKLIIWDLQH--SLPR---STCDHE------DGVTCLMWLGTSKY 333 (394)
Q Consensus 269 ~~~--~~~~~h-~~~i~~v~~~~~~~~l~s-~s~dg~i~iwd~~~--~~~~---~~~~~~------~~v~~~~~~~~~~~ 333 (394)
+.. ..+..+ ...+..++|+|+++++++ ...++.+.+|++.. .... ...... ..+..++|+|++++
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 432 222222 336788999999996655 56788999999864 2111 111111 34788999999998
Q ss_pred E-EEEeCCCeEEEEECC---CCeEEEEeecccCceeEEEEccCCCEEEEEeCC-CcEEEEecc
Q 016187 334 V-VTGCVDGKVRVWDSL---SGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLD-GTARVFEIA 391 (394)
Q Consensus 334 l-~sg~~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-g~i~iw~~~ 391 (394)
| ++...++.|.+|++. +.+.+..+..+...+..++|+||+++|++++.+ +.|.+|+++
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 7 455678999999986 235566677777778999999999988887754 899999654
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.93 E-value=3.2e-23 Score=188.59 Aligned_cols=271 Identities=15% Similarity=0.156 Sum_probs=186.8
Q ss_pred cCCCeEEEEEcC--CCeeeE-eecCcccCEEEEEEcCCCCEEEEEeC---CCcEEEEeCCCCce--EEEEecCCCCEEEE
Q 016187 84 GGDDKGFFWRIN--QGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGL---DGLVQIWDPSSGNL--KCTLEGPGGGVEWV 155 (394)
Q Consensus 84 ~~d~~v~~w~~~--~~~~~~-~~~~h~~~V~~v~~s~~g~~l~t~s~---d~~i~vwd~~~~~~--~~~~~~~~~~v~~~ 155 (394)
+.++.+.+|.+. ++++.. ....+...+..++|+|+|+ |++++. ++.|++|++.+++. +..+..+...+..+
T Consensus 13 ~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp SSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEE
T ss_pred CCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEE
Confidence 345667777654 555443 3344567788899999999 555544 68999999977763 33444456678899
Q ss_pred EEcCCCCEEEEec-CCCeEEEEeCCc-c--ceeeeecc---------cCcCeEEEEECCCCCeEEEEeCCCcEEEEcCC-
Q 016187 156 SWHPRGHIVLAGS-EDSTVWMWNADR-A--AYLNMFSG---------HGSSVTCGDFTPDGKTICTGSDDATLRVWNPK- 221 (394)
Q Consensus 156 ~~~~~~~~l~~~s-~d~~i~iw~~~~-~--~~~~~~~~---------h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~- 221 (394)
+|+|++++|++++ .++.+.+|++.. + ..+..+.. +...+.+++|+|+|+++++...++.|++|++.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 9999999887777 789999999862 2 22222221 12347889999999966777778999999998
Q ss_pred CCceEEEEcCCCCcccCeEEEEEcCCCCEEEE-EeCCCcEEEEECCC--CcE--EEEeccCC------CCEEEEEECCCC
Q 016187 222 SGENIHVIRGHPYHTEGLTCLTISADSTLALS-GSKDGSVHMVNITT--GKV--VSSLVSHT------DSIECIGFSRSS 290 (394)
Q Consensus 222 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-g~~dg~i~i~d~~~--~~~--~~~~~~h~------~~i~~v~~~~~~ 290 (394)
+++.................++|+|+++++++ +..++.|.+|++.. ++. +..+.... ..+..++|+|++
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 44322211111112235788999999995555 56788999999874 543 22332222 358899999999
Q ss_pred CeE-EEEeCCCcEEEEeCCCC-C--cc-eeccCCCCEEEEEEeCCCCEEEEEeCC-CeEEEE--ECCCCeEEE
Q 016187 291 PWA-ATGSMDQKLIIWDLQHS-L--PR-STCDHEDGVTCLMWLGTSKYVVTGCVD-GKVRVW--DSLSGDCVR 355 (394)
Q Consensus 291 ~~l-~s~s~dg~i~iwd~~~~-~--~~-~~~~~~~~v~~~~~~~~~~~l~sg~~d-g~i~iw--d~~~~~~~~ 355 (394)
++| ++...++.|.+|++... . .. ....+...+..++|+|++++|++++.+ +.|.+| |..++++..
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 977 55667899999998632 1 11 112234557899999999998888765 899999 666776653
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=9e-23 Score=186.70 Aligned_cols=283 Identities=14% Similarity=0.188 Sum_probs=193.1
Q ss_pred cCCCeEEEEEc--CCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCC----CcEEEEeCCC--CceE--EEEecCCCCEE
Q 016187 84 GGDDKGFFWRI--NQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD----GLVQIWDPSS--GNLK--CTLEGPGGGVE 153 (394)
Q Consensus 84 ~~d~~v~~w~~--~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d----~~i~vwd~~~--~~~~--~~~~~~~~~v~ 153 (394)
+.++.+.+|.+ .++++......|...+..++|+|+|++|++++.+ +.|.+|++.. ++.. .....+.....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 45778888876 4455433222277788899999999999999886 7999998765 5432 33343455677
Q ss_pred EEEEcCCCCEEEEec-CCCeEEEEeCCccceeeee------cc--------cCcCeEEEEECCCCCeEEEEe-CCCcEEE
Q 016187 154 WVSWHPRGHIVLAGS-EDSTVWMWNADRAAYLNMF------SG--------HGSSVTCGDFTPDGKTICTGS-DDATLRV 217 (394)
Q Consensus 154 ~~~~~~~~~~l~~~s-~d~~i~iw~~~~~~~~~~~------~~--------h~~~v~~~~~~~~~~~l~s~~-~dg~i~v 217 (394)
.+++ ++++|++++ .++.+.+|++.....+..+ .+ +...+.+++|+|+|++|++++ .++.|++
T Consensus 104 ~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v 181 (361)
T 3scy_A 104 YLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHK 181 (361)
T ss_dssp EEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEE
Confidence 7787 777665555 6889999998753322211 11 123357899999999765554 5889999
Q ss_pred EcCCCCce------E------EEEcCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCcE--EEEe---ccCCC
Q 016187 218 WNPKSGEN------I------HVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKV--VSSL---VSHTD 279 (394)
Q Consensus 218 wd~~~~~~------~------~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-~dg~i~i~d~~~~~~--~~~~---~~h~~ 279 (394)
|++..... + ..... ........++|+|+++++++++ .++.|.+|++.+++. +..+ ..+..
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~ 259 (361)
T 3scy_A 182 FNINPNANADNKEKFLTKGTPEAFKV--APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ 259 (361)
T ss_dssp EEECTTCCTTTCCCCEEEEEEEEEEC--CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCC
T ss_pred EEEcCCCCcccccceeecccccceec--CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCC
Confidence 98764431 1 11111 1234678999999999877766 689999999987754 2333 22335
Q ss_pred CEEEEEECCCCCeEEEEeCC--CcEEEEeCCC--CCcc--eeccCCCCEEEEEEeCCCCEEEEEe-CCCeEEEE--ECCC
Q 016187 280 SIECIGFSRSSPWAATGSMD--QKLIIWDLQH--SLPR--STCDHEDGVTCLMWLGTSKYVVTGC-VDGKVRVW--DSLS 350 (394)
Q Consensus 280 ~i~~v~~~~~~~~l~s~s~d--g~i~iwd~~~--~~~~--~~~~~~~~v~~~~~~~~~~~l~sg~-~dg~i~iw--d~~~ 350 (394)
....++|+|++++|+++..+ ++|.+|++.. .... ........+..++|+|++++|++++ .++.|.+| |..+
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 57899999999998776654 8999999852 2211 1112234577899999999988887 67899996 5567
Q ss_pred CeEEEEe-ecccCceeEEEEc
Q 016187 351 GDCVRTF-SGHRDAIQAISVS 370 (394)
Q Consensus 351 ~~~~~~~-~~h~~~v~~l~~~ 370 (394)
+++.... ..+...+.+++|.
T Consensus 340 g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 340 GLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CCEEECSCCEECSSEEEEEEE
T ss_pred CcEeecceeeeCCCCeEEEEc
Confidence 7765433 2344567888885
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.93 E-value=3e-23 Score=191.57 Aligned_cols=295 Identities=13% Similarity=0.084 Sum_probs=211.0
Q ss_pred EEEcCCCeeeEeecCcccCEEE-----EEEcCCCCEEEEEeC-CC--cEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC
Q 016187 91 FWRINQGDWASEIQGHKDSVSS-----LAFSMDGQLLASGGL-DG--LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH 162 (394)
Q Consensus 91 ~w~~~~~~~~~~~~~h~~~V~~-----v~~s~~g~~l~t~s~-d~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (394)
.++..++..+..+..|...+.. .+|||||++|+.++. ++ .|.+||+.+++......++...+..+.|+|+++
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDD 93 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSS
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCC
Confidence 3566677777788888776666 889999999998887 66 488889998887665555555554678999999
Q ss_pred EEEEecCCCeEEEEeCCccceeeeecccCcCeEEEE--ECCCCCeEEEE----------------------eCCCcEEEE
Q 016187 163 IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGD--FTPDGKTICTG----------------------SDDATLRVW 218 (394)
Q Consensus 163 ~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~l~s~----------------------~~dg~i~vw 218 (394)
.|+.++.++.+++|++.+++....+..+...+.... ++|++++++.. ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 999999999999999998877666665655444333 48999988743 244679999
Q ss_pred cCCCCceEEEEcCCCCcccCeEEEEEcC-CCCEEEEEeCC------CcEEEEECCCCcEEEEeccCC--CCEEEEEECCC
Q 016187 219 NPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKD------GSVHMVNITTGKVVSSLVSHT--DSIECIGFSRS 289 (394)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~d------g~i~i~d~~~~~~~~~~~~h~--~~i~~v~~~~~ 289 (394)
|+.+++...... +...+..+.|+| +++.++....+ ..|.++|+..++. ..+..+. ..+..+.|+|+
T Consensus 174 d~~~g~~~~l~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 174 DLKTGESTVILQ----ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp ETTTCCEEEEEE----ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTT
T ss_pred ECCCCceEEeec----CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCC
Confidence 999886544332 234578899999 99988776653 3788888876543 3444444 35778899999
Q ss_pred CCeEEEEeCC-C----cEEEEeCCCCCcceeccCCCC------EEEEEEeCCCCEEEEE---------eCCCeEEEEECC
Q 016187 290 SPWAATGSMD-Q----KLIIWDLQHSLPRSTCDHEDG------VTCLMWLGTSKYVVTG---------CVDGKVRVWDSL 349 (394)
Q Consensus 290 ~~~l~s~s~d-g----~i~iwd~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~sg---------~~dg~i~iwd~~ 349 (394)
++.|+..+.. + .|.+||+.+............ .....|+|++++|+.. ..+..|++||+.
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 9977654432 2 399999987654332221110 1112689999887754 456789999998
Q ss_pred CCeEEEEeecccC-----------ceeEEEEccCCCEEEEEe-CCCcEEEEecc
Q 016187 350 SGDCVRTFSGHRD-----------AIQAISVSAHQDFLVSVS-LDGTARVFEIA 391 (394)
Q Consensus 350 ~~~~~~~~~~h~~-----------~v~~l~~~~~~~~l~s~s-~dg~i~iw~~~ 391 (394)
+++. ..+..|.. .+..++|+||++.|+..+ .+|...||.+.
T Consensus 329 ~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 329 NGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp TTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 8765 45666665 578899999999888666 57888888654
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=1.2e-22 Score=203.42 Aligned_cols=320 Identities=13% Similarity=0.117 Sum_probs=216.5
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccC-----EEEEEEcCCCCEEEEEeCC---------CcE
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDS-----VSSLAFSMDGQLLASGGLD---------GLV 131 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~-----V~~v~~s~~g~~l~t~s~d---------~~i 131 (394)
..++++|+|+ +.+++++ |+++++|++.+++....+.+|... ...++|||||++|+.++.+ +.+
T Consensus 18 ~~~~~~w~~d-g~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISD-HEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSS-SEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECCC-CcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 4567899995 5788876 899999999999988888887643 2347899999999998876 566
Q ss_pred EEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeee-ecccCcCe----------------
Q 016187 132 QIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSV---------------- 194 (394)
Q Consensus 132 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~-~~~h~~~v---------------- 194 (394)
.+||+.+++.. .+..+.+.+..++|+|+|+.|+.+ .++.|++|++.++...+. ..++...+
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 79999998754 355667789999999999988887 468999999987764432 22332222
Q ss_pred -EEEEECCCCCeEEEEeCCC------------------------------------cEEEEcCCC---Cc--eEEEEcCC
Q 016187 195 -TCGDFTPDGKTICTGSDDA------------------------------------TLRVWNPKS---GE--NIHVIRGH 232 (394)
Q Consensus 195 -~~~~~~~~~~~l~s~~~dg------------------------------------~i~vwd~~~---~~--~~~~~~~~ 232 (394)
..+.|||||++||.++.|. +|++||+.+ ++ ....+...
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 3478999999999875332 478888887 63 22233211
Q ss_pred C---CcccCeEEEEEcCCCCEEEEEe----CCCcEEEEECCCCc----EE--EEe--ccCCCCEE-----EEEECCCCCe
Q 016187 233 P---YHTEGLTCLTISADSTLALSGS----KDGSVHMVNITTGK----VV--SSL--VSHTDSIE-----CIGFSRSSPW 292 (394)
Q Consensus 233 ~---~~~~~i~~~~~~~~~~~l~~g~----~dg~i~i~d~~~~~----~~--~~~--~~h~~~i~-----~v~~~~~~~~ 292 (394)
. .+...+..++|+||++.++... .+..|.+||+.+++ +. ..+ ..|...+. .+.|+|+++.
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~ 332 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNS 332 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSE
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCE
Confidence 0 1445688999999999666543 23479999998886 22 111 34555554 6889999998
Q ss_pred EE-EEeC-CC--cEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEE-EEeC----CC--eEEEEECCCCeEEEEeec--
Q 016187 293 AA-TGSM-DQ--KLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVV-TGCV----DG--KVRVWDSLSGDCVRTFSG-- 359 (394)
Q Consensus 293 l~-s~s~-dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-sg~~----dg--~i~iwd~~~~~~~~~~~~-- 359 (394)
++ ..+. +| .|.+||+..............+..+.+ ++++.|+ ++.. .+ .|+..++..++....++.
T Consensus 333 l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~ 411 (740)
T 4a5s_A 333 FYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCEL 411 (740)
T ss_dssp EEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTT
T ss_pred EEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeecccc
Confidence 77 6653 33 588888877665554444455665543 3355554 4443 23 455555554443334542
Q ss_pred --ccCceeEEEEccCCCEEEEEeCC---CcEEEEecc
Q 016187 360 --HRDAIQAISVSAHQDFLVSVSLD---GTARVFEIA 391 (394)
Q Consensus 360 --h~~~v~~l~~~~~~~~l~s~s~d---g~i~iw~~~ 391 (394)
....+..+.|+|++++++..... ..+.+++..
T Consensus 412 ~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~ 448 (740)
T 4a5s_A 412 NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSV 448 (740)
T ss_dssp STTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETT
T ss_pred CCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECC
Confidence 24567899999999987644332 345555543
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.92 E-value=5.2e-24 Score=212.69 Aligned_cols=271 Identities=11% Similarity=0.086 Sum_probs=198.6
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCC---CEEEEEEcCCCCEEEEecC---------CCeEEEEeCC
Q 016187 112 SLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGG---GVEWVSWHPRGHIVLAGSE---------DSTVWMWNAD 179 (394)
Q Consensus 112 ~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~s~---------d~~i~iw~~~ 179 (394)
+++|+|+|+++++ +.|++|++||+.+++....+..+.. .+..++|+|+|++|++++. ++.|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6899999965554 5699999999999987766654432 4889999999999988876 7899999998
Q ss_pred cccee--eeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCccc-----------------CeE
Q 016187 180 RAAYL--NMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTE-----------------GLT 240 (394)
Q Consensus 180 ~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-----------------~i~ 240 (394)
+++.+ ..+ ...+..++|+|||+.|+.+. ++.|++||+.+++........ +.. ...
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~--~~~~v~~g~~~~v~~ee~~~~~~ 172 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNG--RENKIFNGIPDWVYEEEMLATKY 172 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCC--BTTTEEESSCCHHHHHHTTCSSC
T ss_pred CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCC--CcCCeEcccccceeeeecccCcc
Confidence 88762 222 24577899999999999886 789999999887764322111 111 124
Q ss_pred EEEEcCCCCEEEEEeCCC----------------------------------cEEEEECCCCcEE---E-----EeccCC
Q 016187 241 CLTISADSTLALSGSKDG----------------------------------SVHMVNITTGKVV---S-----SLVSHT 278 (394)
Q Consensus 241 ~~~~~~~~~~l~~g~~dg----------------------------------~i~i~d~~~~~~~---~-----~~~~h~ 278 (394)
+++|+|||+.|++++.|. .|++||+.+++.. . .+..|.
T Consensus 173 ~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 173 ALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp CEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSC
T ss_pred cEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCc
Confidence 799999999999887552 7889999887642 1 123577
Q ss_pred CCEEEEEECCCCCeEEEEeCC----CcEEEEe----CCCCCcceec-----cCCCCEE-----EEEEeCCCCEEEE--Ee
Q 016187 279 DSIECIGFSRSSPWAATGSMD----QKLIIWD----LQHSLPRSTC-----DHEDGVT-----CLMWLGTSKYVVT--GC 338 (394)
Q Consensus 279 ~~i~~v~~~~~~~~l~s~s~d----g~i~iwd----~~~~~~~~~~-----~~~~~v~-----~~~~~~~~~~l~s--g~ 338 (394)
..+..++|+|+++++++.... ..|.+|| +.+....... .|...+. .+.|+|+++.++. ..
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 889999999998877774432 2488899 6654333332 4555555 7889999996554 44
Q ss_pred CCC--eEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCC-----CcEEEEecc
Q 016187 339 VDG--KVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLD-----GTARVFEIA 391 (394)
Q Consensus 339 ~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~d-----g~i~iw~~~ 391 (394)
.+| .|++|++.+++ ...+..+...|..+.+. +++.|+..+.+ +.+++|.+.
T Consensus 333 ~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 333 KDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp TTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred cCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 555 57778887766 55677777778888887 88877766654 889999865
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=2.6e-23 Score=194.70 Aligned_cols=201 Identities=19% Similarity=0.241 Sum_probs=154.8
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC-----------eeeE----eecCcccCEEEEEEcCCCCEEE----EE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQG-----------DWAS----EIQGHKDSVSSLAFSMDGQLLA----SG 125 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~-----------~~~~----~~~~h~~~V~~v~~s~~g~~l~----t~ 125 (394)
..++.++++|.. .++++|+.|+ +++|+.... .... ....|...|++++|+|+|++|+ +|
T Consensus 37 ~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 357888999964 5677777777 888874311 1110 0123567899999999999999 78
Q ss_pred eCCCcEEEEeCCCC--------ce---EEEEecCCCCEEEEEEcCC-CCEEEEecCCCeEEEEeCCccceeeeecccCcC
Q 016187 126 GLDGLVQIWDPSSG--------NL---KCTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSS 193 (394)
Q Consensus 126 s~d~~i~vwd~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~ 193 (394)
+.|++|+|||+.++ +. ...+.+|...|.+++|+|+ +++|++++.|++|++||++++.......+|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 89999999998654 22 3345568889999999998 789999999999999999988766666788999
Q ss_pred eEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCC----cccCeEEEEEcCCCCEEEE-EeCCC------cEEE
Q 016187 194 VTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY----HTEGLTCLTISADSTLALS-GSKDG------SVHM 262 (394)
Q Consensus 194 v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~-g~~dg------~i~i 262 (394)
|.+++|+|+|++|++|+.||+|++||++ ++....+..+.. |...+.++.|++++.++++ +..+| .+++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 555555544322 2236899999998877755 33443 3899
Q ss_pred EECCCC
Q 016187 263 VNITTG 268 (394)
Q Consensus 263 ~d~~~~ 268 (394)
|++++.
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 999764
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=2.8e-21 Score=176.76 Aligned_cols=270 Identities=14% Similarity=0.147 Sum_probs=185.6
Q ss_pred CCEEEEEe----CCCcEEEEeC--CCCceEEEEecCCCCEEEEEEcCCCCEEEEecCC----CeEEEEeCCc--cc--ee
Q 016187 119 GQLLASGG----LDGLVQIWDP--SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADR--AA--YL 184 (394)
Q Consensus 119 g~~l~t~s----~d~~i~vwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d----~~i~iw~~~~--~~--~~ 184 (394)
..+++.|+ .++.|.+|.+ .+++.......+...+..++|+|++++|++++.+ +.+.+|++.. ++ .+
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 34556664 3567888865 5665543222255667789999999999888875 7999998754 33 23
Q ss_pred eeecccCcCeEEEEECCCCCeEEEEe-CCCcEEEEcCCCCceEEEE------cCC-----CCcccCeEEEEEcCCCCEEE
Q 016187 185 NMFSGHGSSVTCGDFTPDGKTICTGS-DDATLRVWNPKSGENIHVI------RGH-----PYHTEGLTCLTISADSTLAL 252 (394)
Q Consensus 185 ~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~------~~~-----~~~~~~i~~~~~~~~~~~l~ 252 (394)
.....+...+..+++ ++++|++++ .++.|.+|++.....+..+ .+. ..+...+.+++++|++++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 334445556677777 788777665 6889999998754322111 110 01123467899999999665
Q ss_pred EE-eCCCcEEEEECCCCc-------E------EEEeccCCCCEEEEEECCCCCeEEEEe-CCCcEEEEeCCCCCccee--
Q 016187 253 SG-SKDGSVHMVNITTGK-------V------VSSLVSHTDSIECIGFSRSSPWAATGS-MDQKLIIWDLQHSLPRST-- 315 (394)
Q Consensus 253 ~g-~~dg~i~i~d~~~~~-------~------~~~~~~h~~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~-- 315 (394)
++ ..++.|++|++.... + ......+...+..++|+|+++++++++ .+++|.+|++........
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 54 458899999886433 1 111233455678999999999887776 689999999875422111
Q ss_pred ----ccCCCCEEEEEEeCCCCEEEEEeCC--CeEEEEECC--CCe--EEEEeecccCceeEEEEccCCCEEEEEe-CCCc
Q 016187 316 ----CDHEDGVTCLMWLGTSKYVVTGCVD--GKVRVWDSL--SGD--CVRTFSGHRDAIQAISVSAHQDFLVSVS-LDGT 384 (394)
Q Consensus 316 ----~~~~~~v~~~~~~~~~~~l~sg~~d--g~i~iwd~~--~~~--~~~~~~~h~~~v~~l~~~~~~~~l~s~s-~dg~ 384 (394)
..+......++|+|++++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+|++++|++++ .++.
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCC
Confidence 1233457899999999998776654 899999985 455 4445555 56688999999999888887 6799
Q ss_pred EEEEecc
Q 016187 385 ARVFEIA 391 (394)
Q Consensus 385 i~iw~~~ 391 (394)
|.+|+++
T Consensus 330 v~v~~~d 336 (361)
T 3scy_A 330 IQIFERD 336 (361)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9998764
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.91 E-value=5.3e-22 Score=196.27 Aligned_cols=298 Identities=14% Similarity=0.072 Sum_probs=206.3
Q ss_pred eeeeccCCcEEEEEEcCCCCcEEEEe--cCCCeEEEEEcCCCeeeEeecCcccCEE---------EEEEc--CCCCE-EE
Q 016187 58 HIFSGHSDEVYSVACSPTDATLVATG--GGDDKGFFWRINQGDWASEIQGHKDSVS---------SLAFS--MDGQL-LA 123 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~~~~~lasg--~~d~~v~~w~~~~~~~~~~~~~h~~~V~---------~v~~s--~~g~~-l~ 123 (394)
..+.+|...+..++++|+ ..++++. +.+++..||....+.....+..|...+. ...|+ |||++ |+
T Consensus 17 ~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGD-EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHHTCSCCEEEEEETT-EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHHhhcCCccceeEEcCC-eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 456789999999999984 5566776 6688999999655555666777776666 66666 99998 76
Q ss_pred EEeC-CCcEEEEeCC--C-CceEEEEec-----CCCCEEEEEEcCCCCEEEEecCC----------CeEEEEeCCc----
Q 016187 124 SGGL-DGLVQIWDPS--S-GNLKCTLEG-----PGGGVEWVSWHPRGHIVLAGSED----------STVWMWNADR---- 180 (394)
Q Consensus 124 t~s~-d~~i~vwd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~s~d----------~~i~iw~~~~---- 180 (394)
.++. +..|.+|++. . ++ ...+.. +...+..++|+|+|+.|++++.+ ..|++|++.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 5543 5667777765 3 43 334444 45568899999999999988876 5899999987
Q ss_pred --cceeeeec-ccCcCeEEEEECCCCCeEEEEeCCC--------cEEEEcCC-CCc--eEEEEcCCCCcccCeEEEEEcC
Q 016187 181 --AAYLNMFS-GHGSSVTCGDFTPDGKTICTGSDDA--------TLRVWNPK-SGE--NIHVIRGHPYHTEGLTCLTISA 246 (394)
Q Consensus 181 --~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg--------~i~vwd~~-~~~--~~~~~~~~~~~~~~i~~~~~~~ 246 (394)
+.. ..+. .+...+..++|+|||++|+.++.++ .|++||+. +++ ....+.. .+...+..+.|+|
T Consensus 175 ~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~--~~~~~~~~~~~sp 251 (662)
T 3azo_A 175 DRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG--GPEEAIAQAEWAP 251 (662)
T ss_dssp CGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE--ETTBCEEEEEECT
T ss_pred cCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC--CCCceEcceEECC
Confidence 554 3444 4556777889999999999877553 79999998 561 2333322 1245688999999
Q ss_pred CCCEEEEEeCCC--cEEEEECCCCcEEEEeccCCCC--------EEEEEECCCCCeEEEEeCCCcEEEE--eCCCCCcce
Q 016187 247 DSTLALSGSKDG--SVHMVNITTGKVVSSLVSHTDS--------IECIGFSRSSPWAATGSMDQKLIIW--DLQHSLPRS 314 (394)
Q Consensus 247 ~~~~l~~g~~dg--~i~i~d~~~~~~~~~~~~h~~~--------i~~v~~~~~~~~l~s~s~dg~i~iw--d~~~~~~~~ 314 (394)
+|++++++..++ .|.+||+.+++.......+... +..++|+|++.++++++. +.++|| |+.......
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~~ 330 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELVD 330 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEEE
Confidence 999888888888 6677777677654333322222 567899999999999998 999999 555444444
Q ss_pred eccCCCCEEEE-EEeCCCCEEEEEeCCC--eEEEEECCCCeEEEEeeccc
Q 016187 315 TCDHEDGVTCL-MWLGTSKYVVTGCVDG--KVRVWDSLSGDCVRTFSGHR 361 (394)
Q Consensus 315 ~~~~~~~v~~~-~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~h~ 361 (394)
...+...+..+ .+.++.-++++++.+. .|++||+.+++.......|.
T Consensus 331 l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~ 380 (662)
T 3azo_A 331 AAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHT 380 (662)
T ss_dssp CCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCC
T ss_pred ecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCc
Confidence 44555566666 4444433444555554 46666777777554334443
No 163
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.2e-22 Score=190.20 Aligned_cols=215 Identities=13% Similarity=0.148 Sum_probs=162.3
Q ss_pred CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc----------eee-----eecccCcC
Q 016187 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA----------YLN-----MFSGHGSS 193 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~----------~~~-----~~~~h~~~ 193 (394)
+.+++|+.. .. .+...++.+++++++.++++++.++ +++|+..... .+. ....+...
T Consensus 23 ~~vri~~~~-~~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSP-EE------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCC-SS------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCc-cc------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 468887643 11 1334578899999999999998887 8888753211 000 11134567
Q ss_pred eEEEEECCCCCeEE----EEeCCCcEEEEcCCCC--------ceEEEEcCCCCcccCeEEEEEcCC-CCEEEEEeCCCcE
Q 016187 194 VTCGDFTPDGKTIC----TGSDDATLRVWNPKSG--------ENIHVIRGHPYHTEGLTCLTISAD-STLALSGSKDGSV 260 (394)
Q Consensus 194 v~~~~~~~~~~~l~----s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~g~~dg~i 260 (394)
|.+++|+|+|++|+ +|+.|++|++||+.++ +.+..+.....|...|++++|+|+ +.++++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 8899999999998654 222333333346788999999998 8899999999999
Q ss_pred EEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-------cCCCCEEEEEEeCCCCE
Q 016187 261 HMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-------DHEDGVTCLMWLGTSKY 333 (394)
Q Consensus 261 ~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~~~~~v~~~~~~~~~~~ 333 (394)
++||++++..+.....|...|.+++|+|++.+|++|+.||+|++||++........ .|...+.++.|++++.+
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~ 254 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVF 254 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEE
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceE
Confidence 99999998777777778999999999999999999999999999999832211111 12337899999998888
Q ss_pred EEEE-eCCC------eEEEEECCCC
Q 016187 334 VVTG-CVDG------KVRVWDSLSG 351 (394)
Q Consensus 334 l~sg-~~dg------~i~iwd~~~~ 351 (394)
+++. +.+| .+++|+++..
T Consensus 255 l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 255 AIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEccCCCccCCCCceEEEEeccC
Confidence 7654 3443 3899998764
No 164
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=4.2e-22 Score=183.84 Aligned_cols=287 Identities=11% Similarity=0.060 Sum_probs=199.3
Q ss_pred eeeeeccCCcEEE-----EEEcCCCCcEEEEecC-CC--eEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCC
Q 016187 57 THIFSGHSDEVYS-----VACSPTDATLVATGGG-DD--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD 128 (394)
Q Consensus 57 ~~~~~~h~~~v~~-----~~~~p~~~~~lasg~~-d~--~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d 128 (394)
...+..|...+.. .+|+|++. .||.++. ++ .+++|++.+++......+|...+..+.|||||++|+.++.+
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGS-KLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSC-EEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred eEEecCCcccccchhhcCccCCCCCC-EEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 4456666666666 78999655 4555554 66 48888999998888777787777678899999999999999
Q ss_pred CcEEEEeCCCCceEEEEecCCCCEEEEE--EcCCCCEEEE----------------------ecCCCeEEEEeCCcccee
Q 016187 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVS--WHPRGHIVLA----------------------GSEDSTVWMWNADRAAYL 184 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~----------------------~s~d~~i~iw~~~~~~~~ 184 (394)
+.|++||+.+++.......+...+.... ++|++.+++. ...+..|++||+.+++..
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~ 181 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST 181 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence 9999999999987766666665554444 4889988764 234578999999887654
Q ss_pred eeecccCcCeEEEEECC-CCCeEEEEeCC------CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC-
Q 016187 185 NMFSGHGSSVTCGDFTP-DGKTICTGSDD------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK- 256 (394)
Q Consensus 185 ~~~~~h~~~v~~~~~~~-~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~- 256 (394)
. +..+...+..++|+| +|+.|+.++.+ ..|.++|+..++. ..+.... ....+....|+|+|+.|+..+.
T Consensus 182 ~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~-~~~~~~~~~~spdg~~l~~~~~~ 258 (388)
T 3pe7_A 182 V-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHA-EGESCTHEFWVPDGSALVYVSYL 258 (388)
T ss_dssp E-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCC-TTEEEEEEEECTTSSCEEEEEEE
T ss_pred E-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCC-CCcccccceECCCCCEEEEEecC
Confidence 3 445666788999999 99998877653 3788888765543 3333211 1124677899999997655332
Q ss_pred CC----cEEEEECCCCcE--EEEeccCCCC---EEEEEECCCCCeEEEE---------eCCCcEEEEeCCCCCcceeccC
Q 016187 257 DG----SVHMVNITTGKV--VSSLVSHTDS---IECIGFSRSSPWAATG---------SMDQKLIIWDLQHSLPRSTCDH 318 (394)
Q Consensus 257 dg----~i~i~d~~~~~~--~~~~~~h~~~---i~~v~~~~~~~~l~s~---------s~dg~i~iwd~~~~~~~~~~~~ 318 (394)
++ .|++||+.+++. +..+..+... ...+.|+|++++|+.. ..+..|.+||+..........+
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~ 338 (388)
T 3pe7_A 259 KGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARH 338 (388)
T ss_dssp TTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEEC
T ss_pred CCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccc
Confidence 22 399999998874 3333321000 1123689999887754 4566899999987655544445
Q ss_pred CC-----------CEEEEEEeCCCCEEEEEe-CCCeEEEEE
Q 016187 319 ED-----------GVTCLMWLGTSKYVVTGC-VDGKVRVWD 347 (394)
Q Consensus 319 ~~-----------~v~~~~~~~~~~~l~sg~-~dg~i~iwd 347 (394)
.. .+.+++|+|++++|+..+ .+|...||.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 44 467889999999888665 466666664
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.90 E-value=2e-22 Score=186.28 Aligned_cols=293 Identities=11% Similarity=-0.000 Sum_probs=201.8
Q ss_pred EEEcCCCeeeEeecCcccC-----EEEEEEcCCCCEEEEEeCC---CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC
Q 016187 91 FWRINQGDWASEIQGHKDS-----VSSLAFSMDGQLLASGGLD---GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH 162 (394)
Q Consensus 91 ~w~~~~~~~~~~~~~h~~~-----V~~v~~s~~g~~l~t~s~d---~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (394)
+.|..+++.+..+..+... +..++|||||++|+.++.. ..|.+||+.+++..............+.|+|+++
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 4466777666666655433 7788999999998776543 4688899988875433232222222378999999
Q ss_pred EEEEecCCCeEEEEeCCccceeeeecccCcCeEE-------------------EEECCCCCeEEEE-----eCCCcEEEE
Q 016187 163 IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTC-------------------GDFTPDGKTICTG-----SDDATLRVW 218 (394)
Q Consensus 163 ~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~l~s~-----~~dg~i~vw 218 (394)
.|+.++.++.+++|++.+++.......+...... ..|+|+++.++.+ ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 9999999999999999887765555444332222 3467888776654 356789999
Q ss_pred cCCCCceEEEEcCCCCcccCeEEEEEcC-CCCEEEEEeCC------CcEEEEECCCCcEEEEeccC--CCCEEEEEECCC
Q 016187 219 NPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKD------GSVHMVNITTGKVVSSLVSH--TDSIECIGFSRS 289 (394)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~d------g~i~i~d~~~~~~~~~~~~h--~~~i~~v~~~~~ 289 (394)
|+.+++...... +...+..+.|+| ++..++..+.+ ..|.+|++..++.. .+..+ ...+..++|+|+
T Consensus 174 d~~~g~~~~~~~----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spd 248 (396)
T 3c5m_A 174 DIETGELEVIHQ----DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPD 248 (396)
T ss_dssp ETTTCCEEEEEE----ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTT
T ss_pred ECCCCcEEeecc----CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCC
Confidence 998877554432 344678899999 78766665543 46889998766533 33333 235788999999
Q ss_pred CCeEEEEeCC-----CcEEEEeCCCCCcceeccCCCCEEEEEEeC-CCCEEEEEe----------------CCCeEEEEE
Q 016187 290 SPWAATGSMD-----QKLIIWDLQHSLPRSTCDHEDGVTCLMWLG-TSKYVVTGC----------------VDGKVRVWD 347 (394)
Q Consensus 290 ~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~----------------~dg~i~iwd 347 (394)
+++|+.++.+ +.|.+||+.+.......... ... +.|+| +++++++++ .++.|++||
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 249 GSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp SSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEE
T ss_pred CCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 9988777544 44999999766543332222 233 88999 999888765 347899999
Q ss_pred CCCCeEEEEeecccC-----------ceeEEEEccCCCEEEEEeC-CCcEEEEecc
Q 016187 348 SLSGDCVRTFSGHRD-----------AIQAISVSAHQDFLVSVSL-DGTARVFEIA 391 (394)
Q Consensus 348 ~~~~~~~~~~~~h~~-----------~v~~l~~~~~~~~l~s~s~-dg~i~iw~~~ 391 (394)
+.+++.. .+..+.. .+..++|+|+++.|+.++. ++...+|.+.
T Consensus 327 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 327 TKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp TTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 9887753 4555554 2567899999998887764 5777777653
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.90 E-value=1.2e-20 Score=172.52 Aligned_cols=283 Identities=13% Similarity=0.136 Sum_probs=205.8
Q ss_pred CCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCceEEEEecC------
Q 016187 85 GDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKCTLEGP------ 148 (394)
Q Consensus 85 ~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s----------~d~~i~vwd~~~~~~~~~~~~~------ 148 (394)
.|+++++||..+++.+..+..+..+ .++|+|||++|+++. .+++|.+||..+++...++...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999988888877666 899999999999886 3678999999998888777533
Q ss_pred CCCEEEEEEcCCCCEEEEecC--CCeEEEEeCCccceeee-ecccCcCeEEEEECCCC-CeEEEEeCCCcEEEEcCCC-C
Q 016187 149 GGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDG-KTICTGSDDATLRVWNPKS-G 223 (394)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~s~--d~~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~vwd~~~-~ 223 (394)
......++++|++++|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.||.+.+|+... +
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 234567899999999988763 68999999999887776 54322 2235577765 6778889999999998865 4
Q ss_pred ceEEEEc---CCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEecc------CC----CCEEEEEECC
Q 016187 224 ENIHVIR---GHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK--VVSSLVS------HT----DSIECIGFSR 288 (394)
Q Consensus 224 ~~~~~~~---~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~------h~----~~i~~v~~~~ 288 (394)
+...... .......+ ..+..++++..++..+.++.+.++|+.... .+..+.. +. .....++|+|
T Consensus 185 ~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~ 263 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHR 263 (361)
T ss_dssp SEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEET
T ss_pred cEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEec
Confidence 4332211 00011111 122335667777777788999999987553 2222211 00 1111268999
Q ss_pred CCCeEEEEeC-----------CCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--eEEE
Q 016187 289 SSPWAATGSM-----------DQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSG--DCVR 355 (394)
Q Consensus 289 ~~~~l~s~s~-----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~--~~~~ 355 (394)
++..++.+.. .++|.+||+.+.+......-.. +.+++|+|++++|++++. +.|.+||..++ +.++
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLR 341 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeE
Confidence 9887766543 3589999998876554443333 889999999999999887 99999999999 9999
Q ss_pred EeecccCceeEEEEccCCC
Q 016187 356 TFSGHRDAIQAISVSAHQD 374 (394)
Q Consensus 356 ~~~~h~~~v~~l~~~~~~~ 374 (394)
++..+...-..++++|+|.
T Consensus 342 ~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 342 TIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EETTSCSSEEEEEECCCSC
T ss_pred EeccCCCCcEEEEecCCCC
Confidence 9877777778999999885
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=7.8e-21 Score=174.20 Aligned_cols=269 Identities=10% Similarity=0.111 Sum_probs=184.8
Q ss_pred EEEEEeCC--CcEEEEe--CCCCceEEE--Ee-cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCC-ccceeeeec--cc
Q 016187 121 LLASGGLD--GLVQIWD--PSSGNLKCT--LE-GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD-RAAYLNMFS--GH 190 (394)
Q Consensus 121 ~l~t~s~d--~~i~vwd--~~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~-~~~~~~~~~--~h 190 (394)
+|+.|+.. +.|.+|+ ..++++... .. .....+..++|+|++++|++++.+ .+.+|++. +++...... .+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35556543 4577665 456654322 11 233467789999999999888887 99999986 555443222 11
Q ss_pred CcCeEEEEECCCCCe--EEEEe-------------CCCcEEEEcCC-CCceEEEEcCCC-CcccCeEEEEEcCCCCEEEE
Q 016187 191 GSSVTCGDFTPDGKT--ICTGS-------------DDATLRVWNPK-SGENIHVIRGHP-YHTEGLTCLTISADSTLALS 253 (394)
Q Consensus 191 ~~~v~~~~~~~~~~~--l~s~~-------------~dg~i~vwd~~-~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~ 253 (394)
. .+.+++|+|+|++ ++++. .++++++|++. .++....+.... .+...+.+++++|+|+++++
T Consensus 83 g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 83 G-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp S-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred C-CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 2 3456789999994 55553 68999999987 455433332110 12346889999999998877
Q ss_pred Ee-CCCcEEEEECC-CCcEE--EEec--cCCCCEEEEEECCCCCeEEEEeC-CCcEEEEeCC--CCCcc------eec--
Q 016187 254 GS-KDGSVHMVNIT-TGKVV--SSLV--SHTDSIECIGFSRSSPWAATGSM-DQKLIIWDLQ--HSLPR------STC-- 316 (394)
Q Consensus 254 g~-~dg~i~i~d~~-~~~~~--~~~~--~h~~~i~~v~~~~~~~~l~s~s~-dg~i~iwd~~--~~~~~------~~~-- 316 (394)
+. .++.|++|++. +++.. ..+. .|...+..++|+|+++++++++. ++++.+|++. +.... ...
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 65 46899999998 67643 3333 24567899999999999887765 7899999764 22211 111
Q ss_pred ---cCCC------CEEEEE-EeCCCCEEEEEeCCC------eEEEEECC-CCeEEE---EeecccCceeEEEEcc---CC
Q 016187 317 ---DHED------GVTCLM-WLGTSKYVVTGCVDG------KVRVWDSL-SGDCVR---TFSGHRDAIQAISVSA---HQ 373 (394)
Q Consensus 317 ---~~~~------~v~~~~-~~~~~~~l~sg~~dg------~i~iwd~~-~~~~~~---~~~~h~~~v~~l~~~~---~~ 373 (394)
++.. .+..++ |+|++++|+++..+. .|.+|++. +++... ....+...+..++|+| |+
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 1121 478899 999999988776432 89999985 666543 2334555677899999 89
Q ss_pred CEEEEEeCC-CcEEEEecc
Q 016187 374 DFLVSVSLD-GTARVFEIA 391 (394)
Q Consensus 374 ~~l~s~s~d-g~i~iw~~~ 391 (394)
++|++++.+ ++|++|+++
T Consensus 322 ~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp TEEEEECSSSCEEEEEEEE
T ss_pred CEEEEEEcCCCeEEEEEEc
Confidence 999998865 999999875
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=1.2e-20 Score=173.03 Aligned_cols=263 Identities=9% Similarity=0.032 Sum_probs=180.8
Q ss_pred CeEEEEEc--CCCeeeEe--ec-CcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCC-CCceEEEEec-CCCCEEEEEEcC
Q 016187 87 DKGFFWRI--NQGDWASE--IQ-GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS-SGNLKCTLEG-PGGGVEWVSWHP 159 (394)
Q Consensus 87 ~~v~~w~~--~~~~~~~~--~~-~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~-~~~~~~~~~~-~~~~v~~~~~~~ 159 (394)
+.|.+|++ .++++... .. +....+..++|+|+|++|++++.+ .|.+|++. +++....... ..+.+..++|+|
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp 92 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT 92 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC
Confidence 46776664 45554321 11 234468899999999999999888 99999987 7766433221 112355688999
Q ss_pred CCCE--EEEec-------------CCCeEEEEeCC-ccceeeeec----ccCcCeEEEEECCCCCeEEEEeC-CCcEEEE
Q 016187 160 RGHI--VLAGS-------------EDSTVWMWNAD-RAAYLNMFS----GHGSSVTCGDFTPDGKTICTGSD-DATLRVW 218 (394)
Q Consensus 160 ~~~~--l~~~s-------------~d~~i~iw~~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~-dg~i~vw 218 (394)
+++. ++++. .++.+.+|++. .++....+. .+...+.+++|+|+|++|+++.. ++.|++|
T Consensus 93 dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEE
Confidence 9994 45554 68999999986 354433332 24567889999999998887654 6799999
Q ss_pred cCC-CCceEE--EEcCCCCcccCeEEEEEcCCCCEEEEEeC-CCcEEEEECC--CCcEE---EEec---c----CCC---
Q 016187 219 NPK-SGENIH--VIRGHPYHTEGLTCLTISADSTLALSGSK-DGSVHMVNIT--TGKVV---SSLV---S----HTD--- 279 (394)
Q Consensus 219 d~~-~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~g~~-dg~i~i~d~~--~~~~~---~~~~---~----h~~--- 279 (394)
|+. +++... .+.. +.+...+..++|+|+++++++++. ++.|.+|++. +++.. ..+. . |..
T Consensus 173 ~~~~~g~~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 251 (365)
T 1jof_A 173 RKLASGEVELVGSVDA-PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETG 251 (365)
T ss_dssp EECTTSCEEEEEEEEC-SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTS
T ss_pred EECCCCCEEEeeeEec-CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccc
Confidence 998 665422 2221 112456889999999998887764 7899999765 56542 1221 1 122
Q ss_pred ---CEEEEE-ECCCCCeEEEEeCCC------cEEEEeCC-CCCcce---ec-cCCCCEEEEEEeC---CCCEEEEEeCC-
Q 016187 280 ---SIECIG-FSRSSPWAATGSMDQ------KLIIWDLQ-HSLPRS---TC-DHEDGVTCLMWLG---TSKYVVTGCVD- 340 (394)
Q Consensus 280 ---~i~~v~-~~~~~~~l~s~s~dg------~i~iwd~~-~~~~~~---~~-~~~~~v~~~~~~~---~~~~l~sg~~d- 340 (394)
.+..++ |+|++++|++++.+. +|.+|++. ...... .. .+...+..++|+| ++++|++++.+
T Consensus 252 ~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~ 331 (365)
T 1jof_A 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE 331 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS
T ss_pred cccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCC
Confidence 588999 999999887766432 89999985 333222 11 2334456788999 89999998865
Q ss_pred CeEEEEECCCC
Q 016187 341 GKVRVWDSLSG 351 (394)
Q Consensus 341 g~i~iwd~~~~ 351 (394)
+.|++|++...
T Consensus 332 ~~v~v~~~~~~ 342 (365)
T 1jof_A 332 GWLEIYRWKDE 342 (365)
T ss_dssp CEEEEEEEETT
T ss_pred CeEEEEEEchh
Confidence 89999987655
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=5e-21 Score=176.88 Aligned_cols=281 Identities=11% Similarity=0.040 Sum_probs=187.5
Q ss_pred EEEEEEcCCCCcEEEEecC--CCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEE
Q 016187 67 VYSVACSPTDATLVATGGG--DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (394)
Q Consensus 67 v~~~~~~p~~~~~lasg~~--d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~ 144 (394)
+..++|+|++..++.+... +..+++|++.+++......++......+.|+|||++|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 5667899976554444433 34788889988876555444433334478999999999999999999999998876655
Q ss_pred EecCCCCEEE-------------------EEEcCCCCEEEEe-----cCCCeEEEEeCCccceeeeecccCcCeEEEEEC
Q 016187 145 LEGPGGGVEW-------------------VSWHPRGHIVLAG-----SEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFT 200 (394)
Q Consensus 145 ~~~~~~~v~~-------------------~~~~~~~~~l~~~-----s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~ 200 (394)
...+.+.... +.|+|+++.++.+ ..+..|++|++.+++..... .+...+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceEC
Confidence 5544432222 2456666655443 35678999999887654443 466778899999
Q ss_pred C-CCCeEEEEeCC------CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCC
Q 016187 201 P-DGKTICTGSDD------ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTG 268 (394)
Q Consensus 201 ~-~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~ 268 (394)
| +++.|+..+.+ ..|.+||+..++. ..+... .....+..+.|+|+++.++..+.+ +.|++||+.++
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEH-AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCC-CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeecc-CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC
Confidence 9 78877766543 3688888865543 222221 012247788999999977766543 44999999888
Q ss_pred cEEEEeccCCCCEEEEEECC-CCCeEEEEe----------------CCCcEEEEeCCCCCcceeccCCC-----------
Q 016187 269 KVVSSLVSHTDSIECIGFSR-SSPWAATGS----------------MDQKLIIWDLQHSLPRSTCDHED----------- 320 (394)
Q Consensus 269 ~~~~~~~~h~~~i~~v~~~~-~~~~l~s~s----------------~dg~i~iwd~~~~~~~~~~~~~~----------- 320 (394)
+...... .. ... +.|+| +++++++++ .+..|.+||+..........+..
T Consensus 275 ~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~ 351 (396)
T 3c5m_A 275 ENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQI 351 (396)
T ss_dssp CEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSST
T ss_pred CeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccC
Confidence 6543221 11 233 88999 999888765 34789999997765544444443
Q ss_pred CEEEEEEeCCCCEEEEEeC-CCe--EEEEECCCCeE
Q 016187 321 GVTCLMWLGTSKYVVTGCV-DGK--VRVWDSLSGDC 353 (394)
Q Consensus 321 ~v~~~~~~~~~~~l~sg~~-dg~--i~iwd~~~~~~ 353 (394)
.+..+.|+|++++|+.++. ++. |+..++.+++.
T Consensus 352 ~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 352 THPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp TCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred CCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 2456789999998887764 454 44445555544
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=3.9e-20 Score=169.10 Aligned_cols=265 Identities=15% Similarity=0.169 Sum_probs=191.9
Q ss_pred CCCEEEEEe------CCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEec----------CCCeEEEEeCCcc
Q 016187 118 DGQLLASGG------LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMWNADRA 181 (394)
Q Consensus 118 ~g~~l~t~s------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s----------~d~~i~iw~~~~~ 181 (394)
+++++++.. .|+.|.+||..+++.+..+.....+ .++|+|++++++++. .++.|.+||..+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 556665543 3679999999999988877765444 899999999888875 3678999999888
Q ss_pred ceeeeeccc------CcCeEEEEECCCCCeEEEEeC--CCcEEEEcCCCCceEEE-EcCCCCcccCeEEEEEcCCC-CEE
Q 016187 182 AYLNMFSGH------GSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHV-IRGHPYHTEGLTCLTISADS-TLA 251 (394)
Q Consensus 182 ~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~-~~l 251 (394)
+.+..+... ......++|+|+|++|+++.. +++|.+||+.+++.+.. +.. .....+.+.|++ ..+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-----~~~~~v~~~p~~~~~~ 166 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-----AGCWSVIPQPNRPRSF 166 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-----TTEEEEEECTTSSSEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-----CCcceeEEcCCCCeeE
Confidence 777666432 234567899999999988864 68999999999887665 432 122234567765 677
Q ss_pred EEEeCCCcEEEEECCC-CcEEEEe------ccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec--------
Q 016187 252 LSGSKDGSVHMVNITT-GKVVSSL------VSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-------- 316 (394)
Q Consensus 252 ~~g~~dg~i~i~d~~~-~~~~~~~------~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------- 316 (394)
++.+.||++.+|++.. ++..... ..+..++ .+.+++++..++..+.++++.++|+.........
T Consensus 167 ~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 167 MTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp EEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred EEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence 8888999999999865 5554221 1122222 2234566667777788999999998643221100
Q ss_pred -cC----CCCEEEEEEeCCCCEEEEEeC-----------CCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEe
Q 016187 317 -DH----EDGVTCLMWLGTSKYVVTGCV-----------DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 317 -~~----~~~v~~~~~~~~~~~l~sg~~-----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s 380 (394)
.+ ......++++|++++++++.. .+.|.+||+.+++.++++..+. ..+++|+||+++|++++
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEEC
T ss_pred ccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeC
Confidence 00 011112688999888777643 3489999999999999999877 89999999999999888
Q ss_pred CCCcEEEEeccCC
Q 016187 381 LDGTARVFEIADF 393 (394)
Q Consensus 381 ~dg~i~iw~~~~~ 393 (394)
. ++|.+||.++.
T Consensus 324 ~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 324 G-GNVNVYDISQP 335 (361)
T ss_dssp S-SCEEEEECSSS
T ss_pred C-CeEEEEECCCC
Confidence 7 99999998765
No 171
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=1.4e-20 Score=188.28 Aligned_cols=276 Identities=12% Similarity=0.100 Sum_probs=191.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCC-----EEEEEEcCCCCEEEEecCC---------CeEE
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-----VEWVSWHPRGHIVLAGSED---------STVW 174 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~s~d---------~~i~ 174 (394)
...+++|+|||++++++ |++|++||+.+++....+.++... ...++|+|++++|+.++.+ +.++
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45689999999999886 999999999999887777766532 2447899999999988876 5677
Q ss_pred EEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEc-CCCCc--------------ccCe
Q 016187 175 MWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIR-GHPYH--------------TEGL 239 (394)
Q Consensus 175 iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~--------------~~~i 239 (394)
+||+.+++... +..|...+...+|||||+.||.+. ++.|++|++.+++...... +.... -...
T Consensus 96 ~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEEE-cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 99999887543 566777899999999999999885 6899999998876543211 11000 0112
Q ss_pred EEEEEcCCCCEEEEEeCCC------------------------------------cEEEEECCC---Cc--EEEEec---
Q 016187 240 TCLTISADSTLALSGSKDG------------------------------------SVHMVNITT---GK--VVSSLV--- 275 (394)
Q Consensus 240 ~~~~~~~~~~~l~~g~~dg------------------------------------~i~i~d~~~---~~--~~~~~~--- 275 (394)
..+.|||||+.|+.++.|. +|++||+.+ ++ ....+.
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 3478999999988875321 588899988 72 223343
Q ss_pred ---cCCCCEEEEEECCCCCeEEEEeC----CCcEEEEeCCCCC-------ccee--ccCCCCEE-----EEEEeCCCCEE
Q 016187 276 ---SHTDSIECIGFSRSSPWAATGSM----DQKLIIWDLQHSL-------PRST--CDHEDGVT-----CLMWLGTSKYV 334 (394)
Q Consensus 276 ---~h~~~i~~v~~~~~~~~l~s~s~----dg~i~iwd~~~~~-------~~~~--~~~~~~v~-----~~~~~~~~~~l 334 (394)
.|...+..++|+|++++++.... +..|.+||+.+.. .... ..+...+. ...|+|+++.+
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 37778999999999997665432 3379999987655 1211 22443333 67899999987
Q ss_pred E-EEeC-C--CeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEE-EEeC----CCcEEEEec
Q 016187 335 V-TGCV-D--GKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLV-SVSL----DGTARVFEI 390 (394)
Q Consensus 335 ~-sg~~-d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~s~----dg~i~iw~~ 390 (394)
+ ..+. + ..|++||+.+++.. .++.....|..+.. +|++.|+ ++.. .+...||.+
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 7 6653 3 46888998776554 45544555665542 4455544 4443 244566654
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.87 E-value=1.6e-20 Score=185.58 Aligned_cols=282 Identities=13% Similarity=0.087 Sum_probs=199.6
Q ss_pred eecCcccCEEEEEEcCCCCEEEEE--eCCCcEEEEeCCCCceEEEEecCCCCEE---------EEEEc--CCCCE-EEEe
Q 016187 102 EIQGHKDSVSSLAFSMDGQLLASG--GLDGLVQIWDPSSGNLKCTLEGPGGGVE---------WVSWH--PRGHI-VLAG 167 (394)
Q Consensus 102 ~~~~h~~~V~~v~~s~~g~~l~t~--s~d~~i~vwd~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~ 167 (394)
.+.+|...|..++|++++-++++. +.++...||....+.....+..+...+. ...|+ |+++. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 467799999999999887777777 5688899998544444555655555554 45565 99987 6655
Q ss_pred c-CCCeEEEEeCC--c-cceeeeecc-----cCcCeEEEEECCCCCeEEEEeCC----------CcEEEEcCCC------
Q 016187 168 S-EDSTVWMWNAD--R-AAYLNMFSG-----HGSSVTCGDFTPDGKTICTGSDD----------ATLRVWNPKS------ 222 (394)
Q Consensus 168 s-~d~~i~iw~~~--~-~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d----------g~i~vwd~~~------ 222 (394)
+ .+..|+++++. . +. ...+.. |...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 4 36778888876 3 33 333444 66778899999999999998877 5899999987
Q ss_pred CceEEEEc-CCCCcccCeEEEEEcCCCCEEEEEeCC--------CcEEEEECC-CC---cEEEEeccCCCCEEEEEECCC
Q 016187 223 GENIHVIR-GHPYHTEGLTCLTISADSTLALSGSKD--------GSVHMVNIT-TG---KVVSSLVSHTDSIECIGFSRS 289 (394)
Q Consensus 223 ~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~g~~d--------g~i~i~d~~-~~---~~~~~~~~h~~~i~~v~~~~~ 289 (394)
++. ..+. . +...+..++|+|||+.|+.++.+ ..|++||+. ++ +.......|...+..+.|+|+
T Consensus 177 ~~~-~~l~~~---~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd 252 (662)
T 3azo_A 177 SAV-RELSDD---AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD 252 (662)
T ss_dssp GGS-EESSCS---CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT
T ss_pred Cce-eEEEec---CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC
Confidence 443 3333 2 22346678899999999877754 379999998 56 333333445788999999999
Q ss_pred CCeEEEEeCCC--cEEEEeCCCCCcceeccCCCC---------EEEEEEeCCCCEEEEEeCCCeEEEE--ECCCCeEEEE
Q 016187 290 SPWAATGSMDQ--KLIIWDLQHSLPRSTCDHEDG---------VTCLMWLGTSKYVVTGCVDGKVRVW--DSLSGDCVRT 356 (394)
Q Consensus 290 ~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~sg~~dg~i~iw--d~~~~~~~~~ 356 (394)
++++++++.++ .|.+||+..........+... +..++|+++++++++++. +.++|| |..+++ ++.
T Consensus 253 g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~ 330 (662)
T 3azo_A 253 GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVD 330 (662)
T ss_dssp SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEE
T ss_pred CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEE
Confidence 99888888888 566666644433332222111 456888999999999998 999999 655555 678
Q ss_pred eecccCceeEE-EEccCCCEEEEEeCCCcEEEEec
Q 016187 357 FSGHRDAIQAI-SVSAHQDFLVSVSLDGTARVFEI 390 (394)
Q Consensus 357 ~~~h~~~v~~l-~~~~~~~~l~s~s~dg~i~iw~~ 390 (394)
+..|...+..+ ++..+.-++++++.+....+|.+
T Consensus 331 l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 331 AAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp CCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred ecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEE
Confidence 88888888877 55444445556666766666644
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=4.3e-19 Score=160.20 Aligned_cols=242 Identities=14% Similarity=0.128 Sum_probs=188.0
Q ss_pred CCcEEEEEEcCCCCcEEEEecCC------------------------CeEEEEEcCCCeeeEeec-CcccCEEEEEEcCC
Q 016187 64 SDEVYSVACSPTDATLVATGGGD------------------------DKGFFWRINQGDWASEIQ-GHKDSVSSLAFSMD 118 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d------------------------~~v~~w~~~~~~~~~~~~-~h~~~V~~v~~s~~ 118 (394)
-+.+.+|+++|+ ++++++...+ +++.+||..+++....+. ++......++++|+
T Consensus 23 l~~v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 357999999996 5677777776 479999998888876654 45568999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCc-eEEEEe---------cCCCCEEEEEEcC-CCCEEEEec-CCCeEEEEeCCccceeee
Q 016187 119 GQLLASGGLDGLVQIWDPSSGN-LKCTLE---------GPGGGVEWVSWHP-RGHIVLAGS-EDSTVWMWNADRAAYLNM 186 (394)
Q Consensus 119 g~~l~t~s~d~~i~vwd~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~s-~d~~i~iw~~~~~~~~~~ 186 (394)
|+++++...++.|++|+..... .+..+. .+......++++| ++.++++.+ .++.|++|+. .+..+..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEE
Confidence 9999988889999999976442 444442 2334688999999 788888886 6899999994 4555555
Q ss_pred ecc----------cCcCeEEEEECCC-CCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEE--
Q 016187 187 FSG----------HGSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALS-- 253 (394)
Q Consensus 187 ~~~----------h~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-- 253 (394)
+.. +-..+..++++|+ ++++++...++.|++||..+++.+..+... .+...+..++++| +..+.+
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~p-g~~~~~~g 258 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA-SFGRNVFAISYIP-GFLFAVNG 258 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-TTTTCEEEEEEET-TEEEEEEC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-ccCCCcceeeecC-CEEEEeCC
Confidence 432 2234789999998 777788888999999999888888777543 2345688899999 433333
Q ss_pred -----EeCCCcEEEEECCCCcEEEEec---cCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCC
Q 016187 254 -----GSKDGSVHMVNITTGKVVSSLV---SHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 254 -----g~~dg~i~i~d~~~~~~~~~~~---~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~ 309 (394)
...+.+|++|++.+++.+..+. .+...+..++++|++.++++...+++|++|++..
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3345589999999999988873 5667799999999998888888999999999754
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=9.3e-19 Score=157.97 Aligned_cols=249 Identities=15% Similarity=0.137 Sum_probs=189.9
Q ss_pred ccCEEEEEEcCCCCEEEEEeCC------------------------CcEEEEeCCCCceEEEEe-cCCCCEEEEEEcCCC
Q 016187 107 KDSVSSLAFSMDGQLLASGGLD------------------------GLVQIWDPSSGNLKCTLE-GPGGGVEWVSWHPRG 161 (394)
Q Consensus 107 ~~~V~~v~~s~~g~~l~t~s~d------------------------~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 161 (394)
...|.+|+++|+|+++++.+.+ ++|.+||..+++....+. .+......++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888877 479999999898876554 334578899999999
Q ss_pred CEEEEecCCCeEEEEeCCccc-eeeee---------cccCcCeEEEEECC-CCCeEEEEe-CCCcEEEEcCCCCceEEEE
Q 016187 162 HIVLAGSEDSTVWMWNADRAA-YLNMF---------SGHGSSVTCGDFTP-DGKTICTGS-DDATLRVWNPKSGENIHVI 229 (394)
Q Consensus 162 ~~l~~~s~d~~i~iw~~~~~~-~~~~~---------~~h~~~v~~~~~~~-~~~~l~s~~-~dg~i~vwd~~~~~~~~~~ 229 (394)
+++++...++.|++|+..... .+..+ .++-..+..++|+| +++++++.+ .++.|++|+ .+++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 999999999999999986542 33333 23445688999999 788888886 699999999 456666555
Q ss_pred cCC-------CCcccCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEec--cCCCCEEEEEECCCCCeEEEEeCC
Q 016187 230 RGH-------PYHTEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSSLV--SHTDSIECIGFSRSSPWAATGSMD 299 (394)
Q Consensus 230 ~~~-------~~~~~~i~~~~~~~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~--~h~~~i~~v~~~~~~~~l~s~s~d 299 (394)
... +.+......++++|+ +.++++...++.|++|+..+++.+..+. .+...+.+++++| +..+++
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~---- 256 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAV---- 256 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEE----
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEe----
Confidence 321 112234788999998 7888888889999999998888887773 3445667777776 222211
Q ss_pred CcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEee---cccCceeEEEEccCCCEE
Q 016187 300 QKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFS---GHRDAIQAISVSAHQDFL 376 (394)
Q Consensus 300 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l 376 (394)
+++..++...+..|++|+..+++.+..+. ++......|+++|++.++
T Consensus 257 ------------------------------~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ly 306 (329)
T 3fvz_A 257 ------------------------------NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVY 306 (329)
T ss_dssp ------------------------------ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEE
T ss_pred ------------------------------CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEE
Confidence 12222333456789999999999998873 667778999999999999
Q ss_pred EEEeCCCcEEEEecc
Q 016187 377 VSVSLDGTARVFEIA 391 (394)
Q Consensus 377 ~s~s~dg~i~iw~~~ 391 (394)
++...+++|++|++.
T Consensus 307 vad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 307 IGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEESSSCCEEEEEEE
T ss_pred EEECCCCEEEEEeCC
Confidence 999999999999975
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=2.6e-18 Score=151.68 Aligned_cols=237 Identities=8% Similarity=0.127 Sum_probs=181.1
Q ss_pred CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeec------ccCcCeEEEEE-CCCCCeEEEEeC-CCcEEEEcC
Q 016187 149 GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS------GHGSSVTCGDF-TPDGKTICTGSD-DATLRVWNP 220 (394)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~------~h~~~v~~~~~-~~~~~~l~s~~~-dg~i~vwd~ 220 (394)
...+..++++++++++++.+.++.|.+|+.. ++.+..+. ++...+..+++ .++++++++... ++.|++||
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN- 106 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-
T ss_pred cCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-
Confidence 3567889999999988888889999999987 44444442 24456889999 567776666643 89999999
Q ss_pred CCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec--cCCCCEEEEEECCCCCeEEEEeC
Q 016187 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV--SHTDSIECIGFSRSSPWAATGSM 298 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~--~h~~~i~~v~~~~~~~~l~s~s~ 298 (394)
.+++.+..+... +...+..++++|+++++++...++.|.+||.. ++.+..+. .+...+..+++++++.++++...
T Consensus 107 ~~g~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 107 QYGQFVRKFGAT--ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp TTSCEEEEECTT--TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCCcEEEEecCc--cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 566666555422 23467899999999988888889999999964 55555553 34457899999999998888888
Q ss_pred CCcEEEEeCCCCCcceecc--CCCCEEEEEEeCCCCEEEEEeCCC-eEEEEECCCCeEEEEeecccC--ceeEEEEccCC
Q 016187 299 DQKLIIWDLQHSLPRSTCD--HEDGVTCLMWLGTSKYVVTGCVDG-KVRVWDSLSGDCVRTFSGHRD--AIQAISVSAHQ 373 (394)
Q Consensus 299 dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~~~ 373 (394)
++.|++||........... +...+..++++++++++++...++ .|++|+. +++.+..+..+.. .+.+++++|++
T Consensus 184 ~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCC
Confidence 9999999986543322222 225688999999999888888776 9999995 6777777766543 36799999999
Q ss_pred CEEEEEeCCCcEEEEeccC
Q 016187 374 DFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 374 ~~l~s~s~dg~i~iw~~~~ 392 (394)
+++++ +.|++|++|++..
T Consensus 263 ~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 263 SVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEE-ETTTEEEEEECSC
T ss_pred cEEEE-CCCCeEEEEEccc
Confidence 88877 6799999999754
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=4.4e-19 Score=161.05 Aligned_cols=253 Identities=11% Similarity=0.099 Sum_probs=177.2
Q ss_pred CCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCC---C--cEEEEeCCCCceEEEEecCCCCEEEEEEcCC
Q 016187 86 DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD---G--LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPR 160 (394)
Q Consensus 86 d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d---~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 160 (394)
+..+++|++.+++... + ..+..++|||||++|+.++.+ + .|.+|++.+++.......+ . +..++|+|+
T Consensus 42 ~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspd 114 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNED 114 (347)
T ss_dssp EEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTT
T ss_pred cceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCC
Confidence 6778999998876543 3 568899999999999887754 2 4888898888765544433 3 899999999
Q ss_pred CCEEEEecC---------------------------CCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCC
Q 016187 161 GHIVLAGSE---------------------------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA 213 (394)
Q Consensus 161 ~~~l~~~s~---------------------------d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 213 (394)
++.|+.++. ...|++|++.+++.++.+.. . .+..++|+|+| +++++..++
T Consensus 115 g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~ 191 (347)
T 2gop_A 115 SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHRE 191 (347)
T ss_dssp SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCC
T ss_pred CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEeccc
Confidence 998877763 25789999988776344444 3 77889999999 777776542
Q ss_pred -------cEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC--------CcEEEEECCCCcEEEEeccCC
Q 016187 214 -------TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD--------GSVHMVNITTGKVVSSLVSHT 278 (394)
Q Consensus 214 -------~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d--------g~i~i~d~~~~~~~~~~~~h~ 278 (394)
...||.+.+++ ...+.. + ..+..+ +|+|+.++.++.+ ..|.+|| +++.......+.
T Consensus 192 ~~~~~~~~~~l~~~d~~~-~~~l~~---~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~ 262 (347)
T 2gop_A 192 IIPQYFKFWDIYIWEDGK-EEKMFE---K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD 262 (347)
T ss_dssp SSCCSSCCEEEEEEETTE-EEEEEE---E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC
T ss_pred ccccccccccEEEeCCCc-eEEecc---C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCC
Confidence 34444433444 333332 1 234443 8999988777644 3688888 565544444566
Q ss_pred CCEEE-EEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeE-EEEECCCCeEEEE
Q 016187 279 DSIEC-IGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKV-RVWDSLSGDCVRT 356 (394)
Q Consensus 279 ~~i~~-v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i-~iwd~~~~~~~~~ 356 (394)
..+.. +.|+ ++ ++++++.++.++|| +..........+...|.++.|+| .++++++.++.. .+|.+. ++ ...
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~ 335 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQ 335 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEE
T ss_pred cccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEE
Confidence 77886 8999 88 99999999999999 87443334444566789999999 677777777654 677655 54 556
Q ss_pred eecccCce
Q 016187 357 FSGHRDAI 364 (394)
Q Consensus 357 ~~~h~~~v 364 (394)
++.|+..+
T Consensus 336 lt~~n~~~ 343 (347)
T 2gop_A 336 LTDYNDPI 343 (347)
T ss_dssp CCCTTSTT
T ss_pred eccccHhH
Confidence 77766543
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.85 E-value=6.4e-19 Score=160.00 Aligned_cols=256 Identities=12% Similarity=0.126 Sum_probs=180.5
Q ss_pred cCEEEEEEcCCCCEEEEEe---------CCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCC---C--eE
Q 016187 108 DSVSSLAFSMDGQLLASGG---------LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED---S--TV 173 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s---------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d---~--~i 173 (394)
..+..+++ ||++++... .++.|.+||+.+++... + ..+..++|+|+|+.|+.++.+ + .|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence 45677777 888876542 25689999999887543 3 457889999999988877643 2 48
Q ss_pred EEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCC---------------------------CcEEEEcCCCCceE
Q 016187 174 WMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD---------------------------ATLRVWNPKSGENI 226 (394)
Q Consensus 174 ~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---------------------------g~i~vwd~~~~~~~ 226 (394)
++|++.+++.......+ . +..++|+|+|+.|+.++.+ ..|.+||+.+++.+
T Consensus 88 ~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 88 WVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 88888877655544433 3 8899999999998887642 56899999888763
Q ss_pred EEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC-------cEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCC
Q 016187 227 HVIRGHPYHTEGLTCLTISADSTLALSGSKDG-------SVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMD 299 (394)
Q Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg-------~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~d 299 (394)
..+.. . .+..+.|+|++ +++++..++ ...+|.+.+++ ...+..+ ..+..+ +|++++|+.++.+
T Consensus 166 ~~l~~----~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 166 EEFEK----P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp EEEEE----E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred eeecC----C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCCEEEEEEcc
Confidence 44443 1 56788999999 877776542 33444433444 3444444 455544 9999998887754
Q ss_pred --------CcEEEEeCCCCCccee-ccCCCCEEE-EEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEE
Q 016187 300 --------QKLIIWDLQHSLPRST-CDHEDGVTC-LMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISV 369 (394)
Q Consensus 300 --------g~i~iwd~~~~~~~~~-~~~~~~v~~-~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 369 (394)
..|.+|| ....... ..+...+.. +.|+ ++ ++++++.++.+++| +.+++.. .+..+.+.|.+++|
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~ 309 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDV 309 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEE
T ss_pred ccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeee
Confidence 3688888 3322222 234556775 8898 88 89999999999999 8766654 44445778999999
Q ss_pred ccCCCEEEEEeCCCcE-EEEec
Q 016187 370 SAHQDFLVSVSLDGTA-RVFEI 390 (394)
Q Consensus 370 ~~~~~~l~s~s~dg~i-~iw~~ 390 (394)
+| .++++++.++.. ++|.+
T Consensus 310 s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 310 DE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp SS--SEEEEEECSSSCCEEEEE
T ss_pred eC--cEEEEEcCCCChHHheEe
Confidence 99 777888777765 78865
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=6e-18 Score=149.34 Aligned_cols=242 Identities=12% Similarity=0.184 Sum_probs=181.8
Q ss_pred cCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEec------CCCCEEEEEE-cCCCCEEEEecC-CCeEEE
Q 016187 104 QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG------PGGGVEWVSW-HPRGHIVLAGSE-DSTVWM 175 (394)
Q Consensus 104 ~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~------~~~~v~~~~~-~~~~~~l~~~s~-d~~i~i 175 (394)
.+|-..+.+++++++|+++++.+.++.|++||.. ++....+.. +...+..+++ .+++.++++... ++.|++
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 4566789999999999998888889999999987 665555532 2346788999 567777766643 899999
Q ss_pred EeCCccceeeeec-ccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEE
Q 016187 176 WNADRAAYLNMFS-GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSG 254 (394)
Q Consensus 176 w~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g 254 (394)
|+. +++.+..+. .+...+.+++++|+|+++++...++.|.+||.. ++.+..+... .+...+..++++++++++++.
T Consensus 105 ~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 105 YNQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS-KHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp ECT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT-TTCSSEEEEEECSSSEEEEEE
T ss_pred ECC-CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCC-CccCCcEEEEECCCCCEEEEE
Confidence 994 455555443 344578899999999988888888999999964 5555554321 123458899999999988888
Q ss_pred eCCCcEEEEECCCCcEEEEeccC--CCCEEEEEECCCCCeEEEEeCCC-cEEEEeCCCCCcceeccC--CCCEEEEEEeC
Q 016187 255 SKDGSVHMVNITTGKVVSSLVSH--TDSIECIGFSRSSPWAATGSMDQ-KLIIWDLQHSLPRSTCDH--EDGVTCLMWLG 329 (394)
Q Consensus 255 ~~dg~i~i~d~~~~~~~~~~~~h--~~~i~~v~~~~~~~~l~s~s~dg-~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~ 329 (394)
..++.|++||. .++.+..+..+ ...+..+++++++.++++...++ .|.+|+...........+ ...+.++++.|
T Consensus 182 ~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 182 NRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMD 260 (286)
T ss_dssp GGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEET
T ss_pred CCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECC
Confidence 88999999997 45666666443 36789999999999888888776 999999764433332222 23477899999
Q ss_pred CCCEEEEEeCCCeEEEEECCCC
Q 016187 330 TSKYVVTGCVDGKVRVWDSLSG 351 (394)
Q Consensus 330 ~~~~l~sg~~dg~i~iwd~~~~ 351 (394)
+++++++ +.+++|++|+....
T Consensus 261 ~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 261 DGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTEEEEE-ETTTEEEEEECSCC
T ss_pred CCcEEEE-CCCCeEEEEEcccc
Confidence 9987777 67999999987543
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=1.5e-18 Score=156.71 Aligned_cols=269 Identities=12% Similarity=0.102 Sum_probs=198.4
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee
Q 016187 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~ 187 (394)
..|.++.|++++..++..+.++.++.| .++....+..+...+..++|+|++++++++..++.|++|+..+++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 346788899988888777888999999 35556666667777899999999998888889999999999887765544
Q ss_pred cccCcCeEEEEECCCCCeEEEEeCC----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC------C
Q 016187 188 SGHGSSVTCGDFTPDGKTICTGSDD----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK------D 257 (394)
Q Consensus 188 ~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~------d 257 (394)
..+...+.+++++|+|+++++...+ +.|.+||..+++....+... .....+..+.++|+++++++... .
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-STAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-SSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-ccCCcccceEECCCCCEEEEeccccccCCC
Confidence 4566789999999999988877766 68999999877654333321 13356889999999998887654 3
Q ss_pred CcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeE-EEEeCCCcEEEEeCCCC-Ccce------eccC--CCCEEEEEE
Q 016187 258 GSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWA-ATGSMDQKLIIWDLQHS-LPRS------TCDH--EDGVTCLMW 327 (394)
Q Consensus 258 g~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l-~s~s~dg~i~iwd~~~~-~~~~------~~~~--~~~v~~~~~ 327 (394)
+.|..++..+++... +..+...+..++|+|++.++ ++.+.++.|.+|++... .... .... ...+..+++
T Consensus 162 ~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCI 240 (333)
T ss_dssp EEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEE
T ss_pred ceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEE
Confidence 567777776655432 22333457899999999855 45556789999998532 1110 1111 135778999
Q ss_pred eCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccC------ceeEEEEccCCCEEEEEeCC
Q 016187 328 LGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRD------AIQAISVSAHQDFLVSVSLD 382 (394)
Q Consensus 328 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~------~v~~l~~~~~~~~l~s~s~d 382 (394)
.++++++++...++.|.+||. .++.+..+..+.. .+.+++|+++++.|+.++.+
T Consensus 241 d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 241 DSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp BTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 999998888888899999998 5777777765433 68999999998776655544
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=2.2e-18 Score=155.65 Aligned_cols=267 Identities=10% Similarity=0.092 Sum_probs=191.1
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEE
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~ 145 (394)
.|.+++|+|. ...+++.+.++.++.| .++....+..+...+.+++|+|+|++++++..++.|.+||..+++.....
T Consensus 7 ~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 7 DLPTLFYSGK-SNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCBCCSCGG-GGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred ccceeeecCC-ccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 4667788884 4455566778888888 34556667777788899999999998888888999999999988766544
Q ss_pred ecCCCCEEEEEEcCCCCEEEEecCC----CeEEEEeCCccceeeeec--ccCcCeEEEEECCCCCeEEEEeC------CC
Q 016187 146 EGPGGGVEWVSWHPRGHIVLAGSED----STVWMWNADRAAYLNMFS--GHGSSVTCGDFTPDGKTICTGSD------DA 213 (394)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~s~d----~~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~------dg 213 (394)
..+...+..++++|+++++++...+ +.|.+|+..++.....+. .+...+.+++++|+|+++++... .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 4556789999999999988887766 789999988766543332 24457889999999988777654 35
Q ss_pred cEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEE-EEEeCCCcEEEEECCC-CcEEEE--------eccCCCCEEE
Q 016187 214 TLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLA-LSGSKDGSVHMVNITT-GKVVSS--------LVSHTDSIEC 283 (394)
Q Consensus 214 ~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~g~~dg~i~i~d~~~-~~~~~~--------~~~h~~~i~~ 283 (394)
.|..+|..+++...... ....+..++++|+++.+ ++.+.++.|.+|++.+ ++.+.. +..+ ..+..
T Consensus 163 ~l~~~~~~~~~~~~~~~----~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 237 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPIIQ----NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDS 237 (333)
T ss_dssp EEEEECTTSCCEEEEEE----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEE
T ss_pred eEEEEeCCCCEEEEeec----CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCc
Confidence 67777766554332221 12346789999999855 5556688999999863 332211 1122 46788
Q ss_pred EEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCC------CCEEEEEEeCCCCEEEEEeCCC
Q 016187 284 IGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHE------DGVTCLMWLGTSKYVVTGCVDG 341 (394)
Q Consensus 284 v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~sg~~dg 341 (394)
+++++++.+.++...++.|.+||...........+. ..+.+++|+++++.|+.++.++
T Consensus 238 i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 238 CCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred eEECCCCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 999999998888888899999998543222221221 1578899999987777666553
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.84 E-value=3.2e-17 Score=157.44 Aligned_cols=313 Identities=12% Similarity=0.036 Sum_probs=222.1
Q ss_pred CcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCC--CCceEEEEecCCCCEEE
Q 016187 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS--SGNLKCTLEGPGGGVEW 154 (394)
Q Consensus 77 ~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~--~~~~~~~~~~~~~~v~~ 154 (394)
..++++...+++|.++|..+++.+..+... ..+..+.|||||+++++++.|+.|.+||+. +++.+..+... .....
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ 244 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARS 244 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCce
Confidence 457788889999999999999988888643 357799999999999999999999999996 77777777643 34678
Q ss_pred EEEc----CCCCEEEEec-CCCeEEEEeCCccceeeeecc----------cCc-CeEEEEECCCCCe-EEEEeCCCcEEE
Q 016187 155 VSWH----PRGHIVLAGS-EDSTVWMWNADRAAYLNMFSG----------HGS-SVTCGDFTPDGKT-ICTGSDDATLRV 217 (394)
Q Consensus 155 ~~~~----~~~~~l~~~s-~d~~i~iw~~~~~~~~~~~~~----------h~~-~v~~~~~~~~~~~-l~s~~~dg~i~v 217 (394)
++|+ |++++++++. .++++.++|..+.+.++.+.. |.. .+..+.+++++.. +++...+|.|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 6999877665 468999999988887766542 212 5677888887654 556667799999
Q ss_pred EcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCcEEEEecc-----CCCCEEEEEECCC-C
Q 016187 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVVSSLVS-----HTDSIECIGFSRS-S 290 (394)
Q Consensus 218 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~-----h~~~i~~v~~~~~-~ 290 (394)
+|....+.+...... .......+.|+|++++++++. .+++|.++|+.+++++..+.. |.+.-.. -++|+ +
T Consensus 325 vd~~~~~~~~v~~i~--~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g 401 (567)
T 1qks_A 325 VDYTDLNNLKTTEIS--AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPTFG 401 (567)
T ss_dssp EETTCSSEEEEEEEE--CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETTTE
T ss_pred EecCCCccceeeeee--ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCCCC
Confidence 998876543322110 123456788999999887655 678999999999988776643 3221111 25787 4
Q ss_pred CeEEEEe-CCCcEEEEeCCCC-------Ccceecc-CCCCEEEEEEeCCCCEEEEEeC-------CCeEEEEECCCC---
Q 016187 291 PWAATGS-MDQKLIIWDLQHS-------LPRSTCD-HEDGVTCLMWLGTSKYVVTGCV-------DGKVRVWDSLSG--- 351 (394)
Q Consensus 291 ~~l~s~s-~dg~i~iwd~~~~-------~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~-------dg~i~iwd~~~~--- 351 (394)
+..+++. .+++|.++|.... ....... ....-.-+..+|++++|.+... ..+|.++|+.+.
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 481 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGD 481 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCS
T ss_pred cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccccc
Confidence 4555554 4689999998752 2212211 1222233567899999988663 459999998766
Q ss_pred --e-EEEEee--------cccCceeEEEEccCCCEEEEEe-----CCCcEEEEeccCCC
Q 016187 352 --D-CVRTFS--------GHRDAIQAISVSAHQDFLVSVS-----LDGTARVFEIADFK 394 (394)
Q Consensus 352 --~-~~~~~~--------~h~~~v~~l~~~~~~~~l~s~s-----~dg~i~iw~~~~~~ 394 (394)
. ....+. .-...+..+.|+++|+++.... .++.|.++|.+++|
T Consensus 482 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 482 GSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 2 223332 1245788999999998766542 37999999987654
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.83 E-value=2.3e-17 Score=146.39 Aligned_cols=244 Identities=11% Similarity=0.100 Sum_probs=181.2
Q ss_pred ceeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 016187 56 STHIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (394)
Q Consensus 56 ~~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd 135 (394)
....+..+.....+++|+|++..+++++..++.++.|+..++ ...+..+...+.+++++|+|+++++...++.|.+||
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 344455566678899999976558888899999999999877 566667788899999999999888877778999999
Q ss_pred CCCCceEEEEecC----CCCEEEEEEcCCCCEEEE----ec-------------CCCeEEEEeCCccceeeeecccCcCe
Q 016187 136 PSSGNLKCTLEGP----GGGVEWVSWHPRGHIVLA----GS-------------EDSTVWMWNADRAAYLNMFSGHGSSV 194 (394)
Q Consensus 136 ~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~s-------------~d~~i~iw~~~~~~~~~~~~~h~~~v 194 (394)
..+++........ ...+..+++.|+|+++++ |+ ..+.|+.++.. ++ ...+..+...+
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~ 174 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKP 174 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCC
Confidence 9888765433221 234567999999998887 33 13466666665 33 33444566677
Q ss_pred EEEEECCCCCeEEEEeCCCcEEEEcCC-CCce---EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Q 016187 195 TCGDFTPDGKTICTGSDDATLRVWNPK-SGEN---IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (394)
Q Consensus 195 ~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~ 270 (394)
..++|+|+++.+++.+.++.|.+|++. +++. ...+ . .....+..++++++|+++++. ++.|.+|+.. ++.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~--~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T--VEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C--CSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e--CCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 899999999998888888999999986 4443 2233 1 133446678999999977766 8899999986 777
Q ss_pred EEEeccCCCCEEEEEE-CCCCCeEEEEeCCCcEEEEeCCCCC
Q 016187 271 VSSLVSHTDSIECIGF-SRSSPWAATGSMDQKLIIWDLQHSL 311 (394)
Q Consensus 271 ~~~~~~h~~~i~~v~~-~~~~~~l~s~s~dg~i~iwd~~~~~ 311 (394)
+..+..+.. +.+++| +|++..|++++.++ +.-+++.+..
T Consensus 249 ~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 249 LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp EEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred EEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 777777777 899999 68988888888764 4445555443
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.83 E-value=8e-16 Score=136.17 Aligned_cols=280 Identities=8% Similarity=0.037 Sum_probs=203.3
Q ss_pred ecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEE-ecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCcc
Q 016187 103 IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL-EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRA 181 (394)
Q Consensus 103 ~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~ 181 (394)
+..+...+.+++++++|+++++...++.|.+||.. ++..... ......+..+++.+++.++++...++.|..|+....
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI 88 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence 44456789999999999988877668899999988 6544322 234567899999999998888887899999998632
Q ss_pred ceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEE
Q 016187 182 AYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVH 261 (394)
Q Consensus 182 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~ 261 (394)
............+.++++.++|+++++...++.|.+||. +++... +.. +.....+..+++++++.++++...++.|.
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YEL-PNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EEC-SSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecC-CCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 111122234557889999999988888777889999998 554332 221 11234688999999999888887789999
Q ss_pred EEECCCCcEEEE-eccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCccee--ccCCCCEEEEEEeCCCCEEEEEe
Q 016187 262 MVNITTGKVVSS-LVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRST--CDHEDGVTCLMWLGTSKYVVTGC 338 (394)
Q Consensus 262 i~d~~~~~~~~~-~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~sg~ 338 (394)
.||. +++.... +..+...+..+++++++.+.++...++.|.+||. ....... ..+...+.++++.++++..++..
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 9999 6665432 3334556889999999988777777889999998 4332221 12345688999999998777766
Q ss_pred CCCeEEEEECCCCeEEEEe--ecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 339 VDGKVRVWDSLSGDCVRTF--SGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 339 ~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
.++.|..||. +++. ..+ ..+...+.++++ +++.++++.+ .+.+..++.+.
T Consensus 244 ~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 244 GANKIGRLTS-NNII-EEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp TTTEEEEEET-TTEE-EEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC-
T ss_pred CCceEEEECC-CCce-EEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCc
Confidence 7899999998 4543 333 345567899999 8888887766 45566666543
No 184
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.82 E-value=2e-15 Score=133.61 Aligned_cols=281 Identities=12% Similarity=0.080 Sum_probs=200.3
Q ss_pred eccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEe-ecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 016187 61 SGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE-IQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (394)
Q Consensus 61 ~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~-~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~ 139 (394)
..+...+.++++.|+ +.++++...++.+.+|+.. ++.... +..+...+.+++++++|.++++...++.|..|+.. +
T Consensus 11 ~~~~~~~~~i~~d~~-g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 11 TNQDTGPYGITVSDK-GKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CSSSCCEEEEEECTT-SCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCcCCCccceEECCC-CCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 345568999999996 4566666667899999987 554432 23455789999999999988887778899999976 4
Q ss_pred ceEE-EEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceee-eecccCcCeEEEEECCCCCeEEEEeCCCcEEE
Q 016187 140 NLKC-TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN-MFSGHGSSVTCGDFTPDGKTICTGSDDATLRV 217 (394)
Q Consensus 140 ~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~v 217 (394)
+... .+......+..+++.+++.++++...++.|..|+. +++... ....+...+..+++.++|+..++...++.|..
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 4322 22224557889999999998888888899999998 443332 22334556889999999988887777889999
Q ss_pred EcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE-eccCCCCEEEEEECCCCCeEEEE
Q 016187 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS-LVSHTDSIECIGFSRSSPWAATG 296 (394)
Q Consensus 218 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~h~~~i~~v~~~~~~~~l~s~ 296 (394)
||. +++... +.. +.....+..+++++++.++++...++.|.+||. +++.... +..+...+.++++++++.+.++.
T Consensus 167 ~~~-~g~~~~-~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 167 ITE-SGDITE-FKI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp ECT-TCCEEE-EEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EcC-CCcEEE-eeC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEec
Confidence 998 665433 211 112345788999999998888777899999999 6664332 23345678999999999877776
Q ss_pred eCCCcEEEEeCCCCCccee-ccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Q 016187 297 SMDQKLIIWDLQHSLPRST-CDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSG 351 (394)
Q Consensus 297 s~dg~i~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~ 351 (394)
..++.|..||......... ..+...+.++++ +++.+.++.. .+.|..++..++
T Consensus 243 ~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 243 WGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp TTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred cCCceEEEECCCCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence 6788999999843211111 123456888988 8887766655 566777776554
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.82 E-value=6.6e-17 Score=145.70 Aligned_cols=274 Identities=9% Similarity=-0.019 Sum_probs=199.0
Q ss_pred CCCeEEEEEcCCCeeeEeec------CcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEc
Q 016187 85 GDDKGFFWRINQGDWASEIQ------GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWH 158 (394)
Q Consensus 85 ~d~~v~~w~~~~~~~~~~~~------~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (394)
.++.+.++|.++++....+. ........+.+. +++++++...++.|.+||..+++.+.++.. ......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence 48999999999998776542 122456778874 345556666689999999999999888753 4568889999
Q ss_pred CCCCEEEEecCCCeEEEEeCCccceeeeecccC-----cCeEEEEECCCCCeEEEEe--CCCcEEEEcCCCCceEEEEcC
Q 016187 159 PRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-----SSVTCGDFTPDGKTICTGS--DDATLRVWNPKSGENIHVIRG 231 (394)
Q Consensus 159 ~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~ 231 (394)
++++++++...++.|.+||..+++....+.... .....+++ ++..|+.+. .++.|.++|+.+++....+..
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 988655555588999999999888766554332 13456666 344554444 489999999999887776653
Q ss_pred CCCcccCeEEEEEcCCCCEEEEEeCC----------CcEEEEECCCCcEEEEeccC-CCCEEEEEECCCCCeEEEEeCCC
Q 016187 232 HPYHTEGLTCLTISADSTLALSGSKD----------GSVHMVNITTGKVVSSLVSH-TDSIECIGFSRSSPWAATGSMDQ 300 (394)
Q Consensus 232 ~~~~~~~i~~~~~~~~~~~l~~g~~d----------g~i~i~d~~~~~~~~~~~~h-~~~i~~v~~~~~~~~l~s~s~dg 300 (394)
. .....+.++|++++++++..+ +.|.++|..+++....+... ......++++|++.+|..+..
T Consensus 171 g----~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 171 G----IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp S----SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred C----CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 2 234567889999988777655 78999999999887766532 236889999999998887765
Q ss_pred cEEEEeCCCCCcce--eccC-CCCEEEEEEeCC-CCEEEEE----eCCCeEEEEECCCCeEEEEeecccCceeEEEEc
Q 016187 301 KLIIWDLQHSLPRS--TCDH-EDGVTCLMWLGT-SKYVVTG----CVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVS 370 (394)
Q Consensus 301 ~i~iwd~~~~~~~~--~~~~-~~~v~~~~~~~~-~~~l~sg----~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~ 370 (394)
.|.+||+.+..... .... ......++++|+ +...++. ..++.|.+||.. ++.+.++..-.. -..++|.
T Consensus 245 ~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~-P~~~~~~ 320 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGII-PGAFCWK 320 (328)
T ss_dssp SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEES-EEEEEEE
T ss_pred EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccC-cceEEEe
Confidence 89999987654321 1111 356889999994 5555555 578999999998 999988875333 3567764
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=5.1e-17 Score=144.20 Aligned_cols=236 Identities=12% Similarity=0.057 Sum_probs=175.6
Q ss_pred EEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcC
Q 016187 142 KCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNP 220 (394)
Q Consensus 142 ~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~ 220 (394)
+..+.........++|+|+++ +++++..++.|+.|+..++ ...+..+...+.+++++|+|+++++...++.|.+||.
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 344455556678899999998 7888888999999999877 5556667778899999999998888777899999999
Q ss_pred CCCceEEEEcCCC-CcccCeEEEEEcCCCCEEEEE----e-------------CCCcEEEEECCCCcEEEEeccCCCCEE
Q 016187 221 KSGENIHVIRGHP-YHTEGLTCLTISADSTLALSG----S-------------KDGSVHMVNITTGKVVSSLVSHTDSIE 282 (394)
Q Consensus 221 ~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g----~-------------~dg~i~i~d~~~~~~~~~~~~h~~~i~ 282 (394)
.+++......... .....+..++++|+|+++++. + ..+.|..++.. ++ +..+..+.....
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~ 175 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPN 175 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCc
Confidence 8877543322111 112245678999999988873 2 13466667665 44 334455667789
Q ss_pred EEEECCCCCeEEEEeCCCcEEEEeCC-CCCc---c-eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Q 016187 283 CIGFSRSSPWAATGSMDQKLIIWDLQ-HSLP---R-STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTF 357 (394)
Q Consensus 283 ~v~~~~~~~~l~s~s~dg~i~iwd~~-~~~~---~-~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 357 (394)
.++|+|++.++++.+.++.|.+|++. .... . ....+...+..+++.++++++++. ++.|.+|+.. ++.+..+
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence 99999999988777888999999986 2222 1 111233445678999999877666 8899999986 8888888
Q ss_pred ecccCceeEEEE-ccCCCEEEEEeCCCcE
Q 016187 358 SGHRDAIQAISV-SAHQDFLVSVSLDGTA 385 (394)
Q Consensus 358 ~~h~~~v~~l~~-~~~~~~l~s~s~dg~i 385 (394)
..+.. +++++| +++++.|+.++.++..
T Consensus 253 ~~~~~-~~~~~f~~~d~~~L~v~t~~~l~ 280 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEGRTLYMTVSTEFW 280 (296)
T ss_dssp ECSSC-CCEEEEESTTSCEEEEEETTEEE
T ss_pred ECCCC-ceeEEEECCCCCEEEEEcCCeEE
Confidence 88777 999999 5899988888877533
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.80 E-value=5.7e-17 Score=161.46 Aligned_cols=239 Identities=13% Similarity=0.112 Sum_probs=174.2
Q ss_pred CEEEEEEcCCCCEEEEecCCC-----eEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCc-----------
Q 016187 151 GVEWVSWHPRGHIVLAGSEDS-----TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT----------- 214 (394)
Q Consensus 151 ~v~~~~~~~~~~~l~~~s~d~-----~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~----------- 214 (394)
.+..++|+|+|++|+.++.++ .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 578899999999888665433 8999999988766532222 23567899999999999888766
Q ss_pred -----EEEEcCCCCce--EEEEcCCCCcccCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCC------Cc-EEEEec
Q 016187 215 -----LRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSK-----DGSVHMVNITT------GK-VVSSLV 275 (394)
Q Consensus 215 -----i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~-----dg~i~i~d~~~------~~-~~~~~~ 275 (394)
|++|++.+++. ...... ..+...+..+.++|+|++++.++. +..|++||+.+ +. ....+.
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECC-TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred CCCCEEEEEECCCCcccceEEecc-CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 99999988763 222222 123345778999999999887764 56899999976 43 355566
Q ss_pred cCCCCEEEEEECCCCCeEEEEeCC----CcEEEEeCCCCCc---ceeccCCC--CEEEEEEeCCCCEEEEEeCCCe--EE
Q 016187 276 SHTDSIECIGFSRSSPWAATGSMD----QKLIIWDLQHSLP---RSTCDHED--GVTCLMWLGTSKYVVTGCVDGK--VR 344 (394)
Q Consensus 276 ~h~~~i~~v~~~~~~~~l~s~s~d----g~i~iwd~~~~~~---~~~~~~~~--~v~~~~~~~~~~~l~sg~~dg~--i~ 344 (394)
.+...+.. .|+|++..|+..+.. ..|.+||+..... .....+.. .+..+.|++++.+++++..++. |+
T Consensus 284 ~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 284 DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 66666655 478888877766553 3699999876532 33344443 5778899988888888888885 66
Q ss_pred EEECCCCeEEEEeecccCceeEEEEccCCCEEE-EEe---CCCcEEEEeccC
Q 016187 345 VWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLV-SVS---LDGTARVFEIAD 392 (394)
Q Consensus 345 iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-s~s---~dg~i~iw~~~~ 392 (394)
+|+..+++.++.+..+.+.|..+.++|+++.++ +.+ ..++|..|++.+
T Consensus 363 ~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 363 LHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp EEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred EEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 678778888888888888889999999987655 333 357899998764
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.78 E-value=7.1e-18 Score=167.57 Aligned_cols=247 Identities=12% Similarity=0.059 Sum_probs=165.9
Q ss_pred CcccCEEEEEEcCCCCEEE-----EEeCCCcEEEEeCCCCceE-EEEecCCCCEEEEEEcCCCCEEEEecCCCe------
Q 016187 105 GHKDSVSSLAFSMDGQLLA-----SGGLDGLVQIWDPSSGNLK-CTLEGPGGGVEWVSWHPRGHIVLAGSEDST------ 172 (394)
Q Consensus 105 ~h~~~V~~v~~s~~g~~l~-----t~s~d~~i~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~------ 172 (394)
+|...+.+++|||||++|| .|+.+.+|++||+.+++.+ .. .........++|+|+++.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccc
Confidence 5666799999999999998 4444578999999998864 11 111111256899999999998888766
Q ss_pred -------EEEEeCCccc----eeeeecccCcCeEEEEECCCCCeEEEEeCCC----cEEEEcCCCCceEEEEcCCCCccc
Q 016187 173 -------VWMWNADRAA----YLNMFSGHGSSVTCGDFTPDGKTICTGSDDA----TLRVWNPKSGENIHVIRGHPYHTE 237 (394)
Q Consensus 173 -------i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~~ 237 (394)
|++|++.++. .+.....|...+..+.|+|+|++|+.++.++ .|.+|+..+++.. .+..+ ..
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~---~~ 272 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKG---VG 272 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEEC---SS
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecC---CC
Confidence 9999998765 2333334556788999999999998887666 6788876555433 33321 22
Q ss_pred CeEEEEEcCCCCEEEEEe---CCCcEEEEECCCCcE--EEEeccC--CCCEEEEEECCCCCeEEEEeCCCcEEEEeCC--
Q 016187 238 GLTCLTISADSTLALSGS---KDGSVHMVNITTGKV--VSSLVSH--TDSIECIGFSRSSPWAATGSMDQKLIIWDLQ-- 308 (394)
Q Consensus 238 ~i~~~~~~~~~~~l~~g~---~dg~i~i~d~~~~~~--~~~~~~h--~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~-- 308 (394)
......+ +++.+++.+. .++.|.+||+.++.. ...+..+ ...+..++++ ++.++++...|+..+||.+.
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 3444445 5556444444 358899999987642 2333333 4468888888 67788899999988887553
Q ss_pred CCCcceeccC-CCCEEEEEEeCCCCEEEEE----eCCCeEEEEECCCCeEEEEeec
Q 016187 309 HSLPRSTCDH-EDGVTCLMWLGTSKYVVTG----CVDGKVRVWDSLSGDCVRTFSG 359 (394)
Q Consensus 309 ~~~~~~~~~~-~~~v~~~~~~~~~~~l~sg----~~dg~i~iwd~~~~~~~~~~~~ 359 (394)
.........+ ...+..+.++|+++.++.. ...++|++||+.+++. ..++.
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~~ 405 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWAK 405 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEec
Confidence 2222222222 4456677788888777633 2347899999988763 33443
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.78 E-value=2.8e-16 Score=137.20 Aligned_cols=239 Identities=9% Similarity=-0.005 Sum_probs=172.7
Q ss_pred cEEEEEEcCCCCcEEE-EecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEE
Q 016187 66 EVYSVACSPTDATLVA-TGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (394)
Q Consensus 66 ~v~~~~~~p~~~~~la-sg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~ 144 (394)
...+++++|++ .+++ +.+.++.+.+|+..+.........+...+.+++++++|+++++.. ++.|.+||....... .
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-V 101 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-E
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-e
Confidence 67889999964 5666 557789999999766544332233445688999999999766665 889999998765443 2
Q ss_pred Ee-cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCC
Q 016187 145 LE-GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG 223 (394)
Q Consensus 145 ~~-~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 223 (394)
+. .....+..+++.++++++++...++.|.+|+..+.............+.+++++++|+++++...++.|.+||....
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 22 22356889999999998888788899999976554433222233345678999999997777777889999998766
Q ss_pred ceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEE
Q 016187 224 ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLI 303 (394)
Q Consensus 224 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~ 303 (394)
....... .....+..+++++++.++++...++.|.+|+............+...+.++++++++.++++...+++|+
T Consensus 182 ~~~~~~~---~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 182 NQVVLPF---TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp CEEECCC---SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred ceEeecc---cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 5432211 1225678999999998888888889999999876544332223346789999999999888889999999
Q ss_pred EEeCCCC
Q 016187 304 IWDLQHS 310 (394)
Q Consensus 304 iwd~~~~ 310 (394)
++++...
T Consensus 259 ~~~~~~~ 265 (270)
T 1rwi_B 259 KLTSLEH 265 (270)
T ss_dssp EECCCGG
T ss_pred EEcCCCc
Confidence 9987643
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.78 E-value=1.1e-14 Score=139.90 Aligned_cols=289 Identities=13% Similarity=0.079 Sum_probs=208.3
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcC--CCeeeEeecCcccCEEEEEEc----CCCCEEEEEeC-CCcEEEEeCCC
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRIN--QGDWASEIQGHKDSVSSLAFS----MDGQLLASGGL-DGLVQIWDPSS 138 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~--~~~~~~~~~~h~~~V~~v~~s----~~g~~l~t~s~-d~~i~vwd~~~ 138 (394)
.+..++++|++ +++..++.|+.|.+||+. +++.+..+..... ...++|+ |||++++++.. +++|.|+|..+
T Consensus 198 ~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 198 AVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp CEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 56789999965 455566789999999995 7777777765433 5789999 69998887764 58999999999
Q ss_pred CceEEEEecC-----------CCCEEEEEEcCCCCE-EEEecCCCeEEEEeCCccceee--eecccCcCeEEEEECCCCC
Q 016187 139 GNLKCTLEGP-----------GGGVEWVSWHPRGHI-VLAGSEDSTVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGK 204 (394)
Q Consensus 139 ~~~~~~~~~~-----------~~~v~~~~~~~~~~~-l~~~s~d~~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~ 204 (394)
.+.+..+... ...+..+..++++.. ++....+|.|.++|....+.+. .+ ........+.|+|+|+
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHR 354 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSC
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCC
Confidence 9888766421 225777888887664 4556677999999987643222 22 2334566789999999
Q ss_pred eEEEEe-CCCcEEEEcCCCCceEEEEcC-C-CCcc-cCeEEEEEcCCC-CEEEEEe-CCCcEEEEECCC-------CcEE
Q 016187 205 TICTGS-DDATLRVWNPKSGENIHVIRG-H-PYHT-EGLTCLTISADS-TLALSGS-KDGSVHMVNITT-------GKVV 271 (394)
Q Consensus 205 ~l~s~~-~dg~i~vwd~~~~~~~~~~~~-~-~~~~-~~i~~~~~~~~~-~~l~~g~-~dg~i~i~d~~~-------~~~~ 271 (394)
+|+++. .++.|.++|+.+++.+..+.. . ..|. .++. + ++|++ .+++++. .+++|.++|..+ .+.+
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-F-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-E-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-e-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEE
Confidence 886655 678899999999987766643 1 1232 2333 2 57874 4445554 568999999987 6778
Q ss_pred EEeccCCCCEEEEEECCCCCeEEEEeC-------CCcEEEEeCCCC-----Ccc-eec---------cCCCCEEEEEEeC
Q 016187 272 SSLVSHTDSIECIGFSRSSPWAATGSM-------DQKLIIWDLQHS-----LPR-STC---------DHEDGVTCLMWLG 329 (394)
Q Consensus 272 ~~~~~h~~~i~~v~~~~~~~~l~s~s~-------dg~i~iwd~~~~-----~~~-~~~---------~~~~~v~~~~~~~ 329 (394)
.++......-..+..+|+++++..... .++|.++|+.+. ... ... .-...+..+.|++
T Consensus 433 ~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (567)
T 1qks_A 433 DSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK 512 (567)
T ss_dssp EEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECT
T ss_pred EEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECC
Confidence 887655444345788999999888663 458999998755 211 111 0134688999999
Q ss_pred CCCEEEEEeC-----CCeEEEEECCCCeEEEEeec
Q 016187 330 TSKYVVTGCV-----DGKVRVWDSLSGDCVRTFSG 359 (394)
Q Consensus 330 ~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~ 359 (394)
+|+++..+.. ++.|.|+|..+++++++++.
T Consensus 513 ~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 513 DGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp TSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred CCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 9998877643 79999999999999988875
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.77 E-value=3e-16 Score=137.06 Aligned_cols=240 Identities=9% Similarity=-0.022 Sum_probs=173.8
Q ss_pred CEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee
Q 016187 109 SVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~-t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~ 187 (394)
...+++++++|++++ +.+.++.|.+|+..++............+..+++.++++++++.. ++.|.+|+..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678999999999777 547789999999766543322122334577899999999777766 889999998765433222
Q ss_pred cccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 016187 188 SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (394)
Q Consensus 188 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~ 267 (394)
......+..+++.|+|+.+++...++.|.+|+..+........ .....+..++++++++++++...++.|.+|+...
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF---TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC---CSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc---ccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 2233568899999999988887788999999866544322111 1123467789999999888887889999999987
Q ss_pred CcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Q 016187 268 GKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-DHEDGVTCLMWLGTSKYVVTGCVDGKVRVW 346 (394)
Q Consensus 268 ~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~iw 346 (394)
.........+...+..+++++++.++++...++.|.+|+.......... .+...+.++++.++++++++...+++|+++
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL 260 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEE
Confidence 7655443344467899999999987777777899999998765433222 223568899999999988888899999999
Q ss_pred ECCCCe
Q 016187 347 DSLSGD 352 (394)
Q Consensus 347 d~~~~~ 352 (394)
+....+
T Consensus 261 ~~~~~~ 266 (270)
T 1rwi_B 261 TSLEHH 266 (270)
T ss_dssp CCCGGG
T ss_pred cCCCcc
Confidence 876543
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.77 E-value=4.6e-16 Score=136.41 Aligned_cols=214 Identities=11% Similarity=0.046 Sum_probs=170.4
Q ss_pred CCCEEEEecCCCeEEEEeCCccceeeeecccC-cCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccC
Q 016187 160 RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG-SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEG 238 (394)
Q Consensus 160 ~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 238 (394)
.+++|++++.++.|.+||.++++.+..+..+. ..+.+++++|+|++++ +.++.|..||. +++.+..+... ....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~--~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP--AGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC--TTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC--CCcc
Confidence 35789999999999999999999888887765 4678899999999888 45788999999 78887777642 1234
Q ss_pred eEEEEEcCCCCEEEEEeC-CCcEEEEECCCCcEEEEecc------CCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCC
Q 016187 239 LTCLTISADSTLALSGSK-DGSVHMVNITTGKVVSSLVS------HTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSL 311 (394)
Q Consensus 239 i~~~~~~~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~------h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~ 311 (394)
+.++.+.++|+++++.+. ++.+..+|. +|+.+.++.. +......+.+.+++.++++...+++|..||.. ..
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 778899999999999887 888888886 6777766531 22345566789999999999999999999987 54
Q ss_pred cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc------CceeEEEEccCCCEEEEEe
Q 016187 312 PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHR------DAIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 312 ~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~------~~v~~l~~~~~~~~l~s~s 380 (394)
..........+.++...++++++++++.+++|..+|..+|+.+.++..+. ..+..++..++++++++..
T Consensus 157 ~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 157 LLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 44444434455667788999999999989999999999999999887542 2267888889999888874
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.77 E-value=3.9e-14 Score=125.29 Aligned_cols=279 Identities=11% Similarity=0.056 Sum_probs=200.6
Q ss_pred cCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEE-EecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc
Q 016187 104 QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT-LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA 182 (394)
Q Consensus 104 ~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~ 182 (394)
......+.+++++++|+++++...++.|.+||.. ++.... +......+..+++.+++.++++...++.|..|+.. ++
T Consensus 16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 3445678999999999988877778999999988 655432 22233678899999999988887778999999987 44
Q ss_pred eee-eecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEE
Q 016187 183 YLN-MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVH 261 (394)
Q Consensus 183 ~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~ 261 (394)
... ........+.++++.++|+++++...++.|..+|.. ++.. .+.. +.....+..+++.++++++++...++.|.
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDL-PNKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccC-CCCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 322 222234678899999999988887778899999987 5543 2221 11234688999999999877777788999
Q ss_pred EEECCCCcEEEE-eccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-cCCCCEEEEEEeCCCCEEEEEeC
Q 016187 262 MVNITTGKVVSS-LVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-DHEDGVTCLMWLGTSKYVVTGCV 339 (394)
Q Consensus 262 i~d~~~~~~~~~-~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~ 339 (394)
.++. +++.... ...+...+..+++++++.+.++....+.|..|+.......... .....+.++++.+++++.++...
T Consensus 171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred EECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 9998 5554432 2234456889999999987777777788999998433222111 23456889999999987777667
Q ss_pred CCeEEEEECCCCeEEE-EeecccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 340 DGKVRVWDSLSGDCVR-TFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 340 dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
++.|..|+. +++... .+......+.++++.++++++++.. . .|..++.+
T Consensus 250 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 250 ANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp TTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred CCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 799999998 454432 2333455688999999998777665 4 66666643
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=7.6e-16 Score=134.98 Aligned_cols=212 Identities=12% Similarity=0.081 Sum_probs=169.3
Q ss_pred CcEEEEecCCCeEEEEEcCCCeeeEeecCcc-cCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-CCEEE
Q 016187 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHK-DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPG-GGVEW 154 (394)
Q Consensus 77 ~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~-~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~-~~v~~ 154 (394)
+++|++++.|+.+++||.++++.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +|+.+..+..+. ..+..
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 4688999999999999999999999888776 5789999999999998 45788999999 899888887653 46888
Q ss_pred EEEcCCCCEEEEecC-CCeEEEEeCCccceeeeec------ccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEE
Q 016187 155 VSWHPRGHIVLAGSE-DSTVWMWNADRAAYLNMFS------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIH 227 (394)
Q Consensus 155 ~~~~~~~~~l~~~s~-d~~i~iw~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 227 (394)
+.+.++++++++.+. ++.+..++. +++.+..+. ++......+++.++|+++++...++.|..||.. |+.+.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w 159 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN 159 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE
Confidence 999999999998877 778888876 455444432 122234456789999999999999999999988 88877
Q ss_pred EEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCC------CCEEEEEECCCCCeEEEEe
Q 016187 228 VIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT------DSIECIGFSRSSPWAATGS 297 (394)
Q Consensus 228 ~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~------~~i~~v~~~~~~~~l~s~s 297 (394)
.+... .....+...+++.+++++..++.|..+|..+|+.+-++..+. ..+..++..+++.++++..
T Consensus 160 ~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 160 SVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 77642 234456778999999999989999999999999988875432 2367788888888777663
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.76 E-value=3.5e-16 Score=155.81 Aligned_cols=246 Identities=11% Similarity=0.040 Sum_probs=174.9
Q ss_pred ccCCcEEEEEEcCCCCcEEEEecCC-----CeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCc------
Q 016187 62 GHSDEVYSVACSPTDATLVATGGGD-----DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGL------ 130 (394)
Q Consensus 62 ~h~~~v~~~~~~p~~~~~lasg~~d-----~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~------ 130 (394)
+|+..+..++|||++ ++||.+..+ .++++||+.+++.......+. .+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg-~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 122 DGTVALRGYAFSEDG-EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp TSCEEEEEEEECTTS-SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred CCCEEEEEEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccc
Confidence 355568899999965 455544322 289999999998766433222 3678999999999999988766
Q ss_pred ----------EEEEeCCCCce--EEEEec--CCCCEEEEEEcCCCCEEEEecC-----CCeEEEEeCCc------cc-ee
Q 016187 131 ----------VQIWDPSSGNL--KCTLEG--PGGGVEWVSWHPRGHIVLAGSE-----DSTVWMWNADR------AA-YL 184 (394)
Q Consensus 131 ----------i~vwd~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~~~s~-----d~~i~iw~~~~------~~-~~ 184 (394)
|++|++.++.. ...+.. +...+..+.|+|++++|+..+. +..+++|++.+ +. ..
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 99999988763 223333 3445788999999998877654 67899999876 42 34
Q ss_pred eeecccCcCeEEEEECCCCCeEEEEeCC----CcEEEEcCCCCc--eEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC
Q 016187 185 NMFSGHGSSVTCGDFTPDGKTICTGSDD----ATLRVWNPKSGE--NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (394)
Q Consensus 185 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d----g~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg 258 (394)
..+..+...+.. .|+|+|+.|+..+.. +.|.+||+.+++ ....+..+. ....+..+.+++++.++++...++
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH-EKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC-SSCEEEEEEEETTTEEEEEEEETT
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC-CCCeEEEEEEEcCCEEEEEEEECC
Confidence 555566555544 588999887766543 369999998764 223333221 112477788888888888888888
Q ss_pred c--EEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEE-e---CCCcEEEEeCCCCC
Q 016187 259 S--VHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATG-S---MDQKLIIWDLQHSL 311 (394)
Q Consensus 259 ~--i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~-s---~dg~i~iwd~~~~~ 311 (394)
. |.+|++.+++.+..+..+...+..+.++|++..++.. + ..+++.+||+.+..
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4 6667887888778887787888999999998765533 2 35789999987654
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.76 E-value=2.7e-14 Score=130.56 Aligned_cols=262 Identities=12% Similarity=0.037 Sum_probs=183.5
Q ss_pred eEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCceEEEEecC-------CC
Q 016187 88 KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKCTLEGP-------GG 150 (394)
Q Consensus 88 ~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s----------~d~~i~vwd~~~~~~~~~~~~~-------~~ 150 (394)
+|.++|..+++.+..+..-..+ .++|||||++|+.+. .++.|.+||..+.+.+..+.-. ..
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 8899999999988888754444 899999999998875 3678999999988887766432 12
Q ss_pred CEEEEEEcCCCCEEEEecC--CCeEEEEeCCccceeee-ecccCcCeEEEEECCCC-CeEEEEeCCCcEEEEcCCCCceE
Q 016187 151 GVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPDG-KTICTGSDDATLRVWNPKSGENI 226 (394)
Q Consensus 151 ~v~~~~~~~~~~~l~~~s~--d~~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~ 226 (394)
....+.|+|++++|+++.. ++.|.++| .+++.+.. +.... |+.+.|++ +.+++.+.||.+.++|. +++..
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 3457899999999988764 57899999 98887766 54222 24555655 45667788999999999 77765
Q ss_pred EEEcCCC--CcccCe-EEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEeccC----------CCCEEEEEECCCCC
Q 016187 227 HVIRGHP--YHTEGL-TCLTISADSTLALSGSKDGSVHMVNITTGK--VVSSLVSH----------TDSIECIGFSRSSP 291 (394)
Q Consensus 227 ~~~~~~~--~~~~~i-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~h----------~~~i~~v~~~~~~~ 291 (394)
....... ....++ ....+.+++..++..+..+.+.++|+.++. .+..+... ......++++|++.
T Consensus 200 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~ 279 (373)
T 2mad_H 200 GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD 279 (373)
T ss_pred EEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCC
Confidence 3322100 011111 223445555444444467899999987652 22322111 12244578899988
Q ss_pred eEEEEeC----------CCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCC-EEEEEe-CCCeEEEEECCCCeEEEEe
Q 016187 292 WAATGSM----------DQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSK-YVVTGC-VDGKVRVWDSLSGDCVRTF 357 (394)
Q Consensus 292 ~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~-~dg~i~iwd~~~~~~~~~~ 357 (394)
.+..+.. ++.|.++|+.+........-.....+++|+|+++ +++++. .++.|.++|..+++.++++
T Consensus 280 ~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 280 GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 7766543 3579999998876655554445688999999999 777776 5899999999999999884
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.76 E-value=1.9e-16 Score=157.35 Aligned_cols=272 Identities=12% Similarity=0.023 Sum_probs=182.5
Q ss_pred cCCCCEEEEEeCCC---cEEEE--eCCCCceEEEEe------cCCCCEEEEEEcCCCCEEE-----EecCCCeEEEEeCC
Q 016187 116 SMDGQLLASGGLDG---LVQIW--DPSSGNLKCTLE------GPGGGVEWVSWHPRGHIVL-----AGSEDSTVWMWNAD 179 (394)
Q Consensus 116 s~~g~~l~t~s~d~---~i~vw--d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~-----~~s~d~~i~iw~~~ 179 (394)
+|+|++++-...++ .-.+| +...++....+. ++...+..++|+|+|++|+ .|+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37788777665443 23344 444444333322 2333688899999999888 45556799999999
Q ss_pred cccee-eeecccCcCeEEEEECCCCCeEEEEeCCCc-------------EEEEcCCCCce--EEEEcCCCCcccCeEEEE
Q 016187 180 RAAYL-NMFSGHGSSVTCGDFTPDGKTICTGSDDAT-------------LRVWNPKSGEN--IHVIRGHPYHTEGLTCLT 243 (394)
Q Consensus 180 ~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~-------------i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~ 243 (394)
+++.+ .... .......++|+|||+.|+.++.|.. |++|++.+++. ...... +.+...+..+.
T Consensus 156 tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER-TGDPTTFLQSD 233 (695)
T ss_dssp TCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-CCCTTCEEEEE
T ss_pred CCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-CCCCEEEEEEE
Confidence 88764 2111 1111256899999999999988776 99999988762 222222 22334678899
Q ss_pred EcCCCCEEEEEeCCC----cEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEe---CCCcEEEEeCCCCCc---c
Q 016187 244 ISADSTLALSGSKDG----SVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGS---MDQKLIIWDLQHSLP---R 313 (394)
Q Consensus 244 ~~~~~~~l~~g~~dg----~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s---~dg~i~iwd~~~~~~---~ 313 (394)
++|+|++++.++.++ .|.+++..+++ ...+..+...+....+ +++.++++.. .+++|.+||+.+... .
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWK 311 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCE
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCe
Confidence 999999988877666 67778765554 3344455556666666 4555555544 257899999876542 3
Q ss_pred eeccC--CCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCeEEEEeecc-cCceeEEEEccCCCEEE----EEeCCCcE
Q 016187 314 STCDH--EDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL-SGDCVRTFSGH-RDAIQAISVSAHQDFLV----SVSLDGTA 385 (394)
Q Consensus 314 ~~~~~--~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~-~~~~~~~~~~h-~~~v~~l~~~~~~~~l~----s~s~dg~i 385 (394)
....+ ...+..+.|+ ++.++++...|+..++|... +++.++.+..+ .+.|..++++|+++.++ +....++|
T Consensus 312 ~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v 390 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQI 390 (695)
T ss_dssp EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEE
T ss_pred EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 33333 3457778888 67788899999998888554 46667777765 66788889999988766 33345789
Q ss_pred EEEeccC
Q 016187 386 RVFEIAD 392 (394)
Q Consensus 386 ~iw~~~~ 392 (394)
++|++.+
T Consensus 391 ~~~d~~~ 397 (695)
T 2bkl_A 391 YKTSVST 397 (695)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999764
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.75 E-value=7.6e-16 Score=138.74 Aligned_cols=259 Identities=11% Similarity=0.029 Sum_probs=184.8
Q ss_pred CCCcEEEEeCCCCceEEEEe------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEEC
Q 016187 127 LDGLVQIWDPSSGNLKCTLE------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFT 200 (394)
Q Consensus 127 ~d~~i~vwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~ 200 (394)
.+++|.++|..+++....+. ........+.+. .++++++...++.|.+||..+++.+..+. ....+..++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 37899999999988754431 112345667774 45566777778999999999998887774 34567889999
Q ss_pred CCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCC--CcccCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCcEEEEeccC
Q 016187 201 PDGKTICTGSDDATLRVWNPKSGENIHVIRGHP--YHTEGLTCLTISADSTLALSGS-KDGSVHMVNITTGKVVSSLVSH 277 (394)
Q Consensus 201 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~g~-~dg~i~i~d~~~~~~~~~~~~h 277 (394)
++++..++...++.|.+||+.+++....+.... ........+++ .+++++++.. .++.|.++|+.+++.+..+...
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 988555555489999999999988766655322 00012334555 3444555544 4899999999999988777543
Q ss_pred CCCEEEEEECCCCCeEEEEeCC----------CcEEEEeCCCCCcceeccC--CCCEEEEEEeCCCCEEEEEeCCCeEEE
Q 016187 278 TDSIECIGFSRSSPWAATGSMD----------QKLIIWDLQHSLPRSTCDH--EDGVTCLMWLGTSKYVVTGCVDGKVRV 345 (394)
Q Consensus 278 ~~~i~~v~~~~~~~~l~s~s~d----------g~i~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~sg~~dg~i~i 345 (394)
.....+.++|++++++++..+ +.|.++|..+......... ......++++|++++|.++.. .|.+
T Consensus 172 -~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~ 248 (328)
T 3dsm_A 172 -IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWR 248 (328)
T ss_dssp -SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEE
T ss_pred -CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEE
Confidence 345678999999877776554 7899999887654433322 236789999999999888754 8999
Q ss_pred EECCCCeEEE-E-eecccCceeEEEEcc-CCCEEEEE----eCCCcEEEEecc
Q 016187 346 WDSLSGDCVR-T-FSGHRDAIQAISVSA-HQDFLVSV----SLDGTARVFEIA 391 (394)
Q Consensus 346 wd~~~~~~~~-~-~~~h~~~v~~l~~~~-~~~~l~s~----s~dg~i~iw~~~ 391 (394)
||..+++... . +..+......++++| ++.++++. ..++.|.+|+.+
T Consensus 249 ~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 249 MPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 9998887642 1 222245678999999 56677776 678999999865
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.75 E-value=8.2e-14 Score=123.17 Aligned_cols=276 Identities=12% Similarity=0.058 Sum_probs=197.0
Q ss_pred cCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeE-eecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 016187 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (394)
Q Consensus 63 h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~-~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~ 141 (394)
......++++.|+ +.+.++...++.+.+|+.. ++... .+..+...+.+++++++|+++++...++.|.++|.. ++.
T Consensus 18 ~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 18 PDSGPYGITSSED-GKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp TTCCEEEEEECTT-SCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCcceeeECCC-CCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 4557889999985 5566666678999999987 65543 233445679999999999988877778899999987 655
Q ss_pred EE-EEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceee-eecccCcCeEEEEECCCCCeEEEEeCCCcEEEEc
Q 016187 142 KC-TLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN-MFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWN 219 (394)
Q Consensus 142 ~~-~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd 219 (394)
.. .+......+..+++.++++++++...++.|..++.. ++... .+......+.++++.++++..++...++.|..+|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 32 222234678899999999988888778899999987 44332 2233455788999999999777776688999999
Q ss_pred CCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE-eccCCCCEEEEEECCCCCeEEEEeC
Q 016187 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS-LVSHTDSIECIGFSRSSPWAATGSM 298 (394)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~-~~~h~~~i~~v~~~~~~~~l~s~s~ 298 (394)
. +++... +.. +.....+..+++++++.++++....+.|.+++. +++.... +..+...+.++++++++.+.++...
T Consensus 174 ~-~g~~~~-~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 174 N-TGKLEE-YPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp T-TCCEEE-EEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred C-CCcEEE-eeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 8 555433 221 122346889999999988887777888999998 5554432 3334567889999999987777767
Q ss_pred CCcEEEEeCCCCCcceec-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Q 016187 299 DQKLIIWDLQHSLPRSTC-DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 299 dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~ 348 (394)
++.|..|+.......... .....+.+++..+++.+.++.. . .|..++.
T Consensus 250 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 250 ANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 789999998432221111 1234577888888887666554 4 6666654
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.74 E-value=4.1e-14 Score=129.34 Aligned_cols=269 Identities=13% Similarity=0.062 Sum_probs=186.4
Q ss_pred EEcCCCCEEEEEeC--CC---cEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEec----------CCCeEEEEeC
Q 016187 114 AFSMDGQLLASGGL--DG---LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMWNA 178 (394)
Q Consensus 114 ~~s~~g~~l~t~s~--d~---~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s----------~d~~i~iw~~ 178 (394)
...|++++++++.. .. +|.++|..+++.+..+.....+ .++++|+++.++.+. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 34577777766653 22 8899999999988777654444 899999999888775 3678999999
Q ss_pred Cccceeeeeccc-------CcCeEEEEECCCCCeEEEEeC--CCcEEEEcCCCCceEEE-EcCCCCcccCeEEEEEcCCC
Q 016187 179 DRAAYLNMFSGH-------GSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHV-IRGHPYHTEGLTCLTISADS 248 (394)
Q Consensus 179 ~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~ 248 (394)
.+.+.+..+... ......++|+|+|++|+.+.. +.+|.++| .+++.+.. +... .++.+.|++
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-------~~~~~~~~~ 176 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-------TCYHIHPGA 176 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-------ceEEEEeCC
Confidence 887766654321 123457899999999998874 57899999 99887665 4321 123444554
Q ss_pred -CEEEEEeCCCcEEEEECCCCcEEEEec-----cCCCCE-EEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce--ecc--
Q 016187 249 -TLALSGSKDGSVHMVNITTGKVVSSLV-----SHTDSI-ECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS--TCD-- 317 (394)
Q Consensus 249 -~~l~~g~~dg~i~i~d~~~~~~~~~~~-----~h~~~i-~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~--~~~-- 317 (394)
+.+++.+.||++.+++. +++...... ....++ ....+.+++..++..+..+.+.+.|+....... ...
T Consensus 177 ~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~ 255 (373)
T 2mad_H 177 PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDAL 255 (373)
T ss_pred CceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeec
Confidence 45667778999999999 887663321 111221 223455555544444467889988885432111 000
Q ss_pred ---------CCCCEEEEEEeCCCCEEEEEeC----------CCeEEEEECCCCeEEEEeecccCceeEEEEccCCC-EEE
Q 016187 318 ---------HEDGVTCLMWLGTSKYVVTGCV----------DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD-FLV 377 (394)
Q Consensus 318 ---------~~~~v~~~~~~~~~~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~ 377 (394)
.......+.++++++.+..+.. .+.|.++|..+++.++++.. ......++|+||++ +++
T Consensus 256 ~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 256 SGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLY 334 (373)
T ss_pred CCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEE
Confidence 1223444778999888777653 35799999999999999864 33578999999999 677
Q ss_pred EEe-CCCcEEEEeccCCC
Q 016187 378 SVS-LDGTARVFEIADFK 394 (394)
Q Consensus 378 s~s-~dg~i~iw~~~~~~ 394 (394)
++. .++.|.+||.++.|
T Consensus 335 v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 335 ALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EEcCCCCeEEEEECCCCC
Confidence 776 58999999988764
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.74 E-value=2.8e-15 Score=135.65 Aligned_cols=293 Identities=14% Similarity=0.143 Sum_probs=200.4
Q ss_pred EcCCCCcEEEEecC----CCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEe----------CCCcEEEEeCC
Q 016187 72 CSPTDATLVATGGG----DDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPS 137 (394)
Q Consensus 72 ~~p~~~~~lasg~~----d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s----------~d~~i~vwd~~ 137 (394)
..|++..++++-.. ++.+.+.|..+++.+..+..-..+ . +++||||++|++++ .++.|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 35655555554333 679999999999999888755555 4 99999999887765 36789999999
Q ss_pred CCceEEEEecCC-------CCEEEEEEcCCCCEEEEecC--CCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEE
Q 016187 138 SGNLKCTLEGPG-------GGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (394)
Q Consensus 138 ~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~s~--d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 208 (394)
+++.+.++.-.. .....+.|+|++++++++.. ++.|.++|+.+.+.+..+..... ...+....+.+++
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFM 194 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEE
Confidence 999888775332 23456899999998887753 68999999999988887753221 1223334567778
Q ss_pred EeCCCcEEEEcCCC-CceEEEEcCCCCc--ccCeE-EEEE-cCCCCEEEEEeCCCcEEEEECCCCc--EEEEec--c---
Q 016187 209 GSDDATLRVWNPKS-GENIHVIRGHPYH--TEGLT-CLTI-SADSTLALSGSKDGSVHMVNITTGK--VVSSLV--S--- 276 (394)
Q Consensus 209 ~~~dg~i~vwd~~~-~~~~~~~~~~~~~--~~~i~-~~~~-~~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~--~--- 276 (394)
.+.||++.+.++.+ ++...... ..+. ...+. ...| .++|++++ .+.+|.+.++|+.++. .+..+. .
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~-~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~ 272 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHT-EVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAE 272 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEEC-CCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeec-ceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccc
Confidence 88899998888876 44322211 1111 11221 1244 46776655 4558999999997654 332221 0
Q ss_pred -----CCCCEEEEEECCCCCeEEEEeC----------CCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCC-EEEEEe-C
Q 016187 277 -----HTDSIECIGFSRSSPWAATGSM----------DQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSK-YVVTGC-V 339 (394)
Q Consensus 277 -----h~~~i~~v~~~~~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~-~ 339 (394)
.......+++++++..++.... .++|.++|+.+........-...+..++++++++ +|++.. .
T Consensus 273 ~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~ 352 (386)
T 3sjl_D 273 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTG 352 (386)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETT
T ss_pred ccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCC
Confidence 1123345778898887766532 3579999998877665554445678899999996 666654 5
Q ss_pred CCeEEEEECCCCeEEEEeecccCceeEEEEccC
Q 016187 340 DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAH 372 (394)
Q Consensus 340 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~ 372 (394)
++.|.++|..+++.++++..-.. -+.|.+++|
T Consensus 353 ~~~VsViD~~t~k~~~~i~~~~~-p~~l~~s~d 384 (386)
T 3sjl_D 353 DKTLYIHDAESGEELRSVNQLGH-GPQVITTAD 384 (386)
T ss_dssp TTEEEEEETTTCCEEEEECCCCS-SCCEEEECC
T ss_pred CCeEEEEECCCCcEEEEecCCCC-CceeEECCc
Confidence 89999999999999999874322 245667765
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.71 E-value=1.6e-14 Score=130.62 Aligned_cols=273 Identities=14% Similarity=0.080 Sum_probs=191.8
Q ss_pred EEEEcCCCCEEEEEeC-----CCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEec----------CCCeEEEE
Q 016187 112 SLAFSMDGQLLASGGL-----DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMW 176 (394)
Q Consensus 112 ~v~~s~~g~~l~t~s~-----d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s----------~d~~i~iw 176 (394)
.....|+++.++.... ++.|.+.|..+++.+.++.....+ . ++++|++++++++. .++.|.+|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 3456799998887765 679999999999999888765555 4 99999999877765 36789999
Q ss_pred eCCccceeeeeccc-------CcCeEEEEECCCCCeEEEEeC--CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCC
Q 016187 177 NADRAAYLNMFSGH-------GSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISAD 247 (394)
Q Consensus 177 ~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (394)
|..+.+.+..+.-. ......++|+|||++++.+.. ++.|.++|+.+++.+..+... +. ...+...
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-----g~-~~~~P~g 188 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-----DC-YHIFPTA 188 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----SE-EEEEEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-----Cc-ceeecCC
Confidence 99998877765421 123456899999999888764 689999999999988777531 11 1223334
Q ss_pred CCEEEEEeCCCcEEEEECCC-CcEEEEeccC----CCCEE-EEEE-CCCCCeEEEEeCCCcEEEEeCCCCCccee--cc-
Q 016187 248 STLALSGSKDGSVHMVNITT-GKVVSSLVSH----TDSIE-CIGF-SRSSPWAATGSMDQKLIIWDLQHSLPRST--CD- 317 (394)
Q Consensus 248 ~~~l~~g~~dg~i~i~d~~~-~~~~~~~~~h----~~~i~-~v~~-~~~~~~l~s~s~dg~i~iwd~~~~~~~~~--~~- 317 (394)
.+.+++.+.||++.++++.+ ++.......+ ..++. ...| .++++++. .+.+|++.+.|+........ ..
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceec
Confidence 45667788899999999876 5643322111 12221 1344 35665444 56689999999865432110 00
Q ss_pred ----------CCCCEEEEEEeCCCCEEEEEeC----------CCeEEEEECCCCeEEEEeecccCceeEEEEccCCC-EE
Q 016187 318 ----------HEDGVTCLMWLGTSKYVVTGCV----------DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD-FL 376 (394)
Q Consensus 318 ----------~~~~v~~~~~~~~~~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l 376 (394)
.......++++++++.++.... ...|.+.|+.+++.++++.. ...++.|+|++|++ +|
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLL 346 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEE
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEE
Confidence 1122334677898888777642 25799999999999998874 23688999999996 66
Q ss_pred EEE-eCCCcEEEEeccCCC
Q 016187 377 VSV-SLDGTARVFEIADFK 394 (394)
Q Consensus 377 ~s~-s~dg~i~iw~~~~~~ 394 (394)
++. ..++.|.++|..+.|
T Consensus 347 y~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp EEEETTTTEEEEEETTTCC
T ss_pred EEEcCCCCeEEEEECCCCc
Confidence 554 558999999987754
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.70 E-value=1.7e-15 Score=151.57 Aligned_cols=241 Identities=13% Similarity=0.088 Sum_probs=158.9
Q ss_pred CcccCEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCe-------
Q 016187 105 GHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDST------- 172 (394)
Q Consensus 105 ~h~~~V~~v~~s~~g~~l~t~s~d-----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~------- 172 (394)
+|...+..++|||||++||.++.+ ..|++||+.+++.+.... +...+..++|+|+ +.|+.++.+..
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 344578899999999999877644 469999999998754311 1111246789999 88887776543
Q ss_pred -------EEEEeCCccce----eeeecccCcCeEEEEECCCCCeEEEEeCCC-----cEEEEcCCCC--ceEEEEcCCCC
Q 016187 173 -------VWMWNADRAAY----LNMFSGHGSSVTCGDFTPDGKTICTGSDDA-----TLRVWNPKSG--ENIHVIRGHPY 234 (394)
Q Consensus 173 -------i~iw~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~--~~~~~~~~~~~ 234 (394)
|++|++.++.. +.....+...+..+.|+|||++|+..+.++ .|.+||+.++ +....+...
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~-- 315 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD-- 315 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS--
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC--
Confidence 88999876542 222223334578899999999988777544 7999998776 313344332
Q ss_pred cccCeEEEEEcCCCCEEEEEeC----CCcEEEEECCCC--cEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCC
Q 016187 235 HTEGLTCLTISADSTLALSGSK----DGSVHMVNITTG--KVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQ 308 (394)
Q Consensus 235 ~~~~i~~~~~~~~~~~l~~g~~----dg~i~i~d~~~~--~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~ 308 (394)
....... ++|++..++..+. ++.|.+||+.++ +....+..+...+..+.++ ++.++++...|+..+||.+.
T Consensus 316 -~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 316 -LKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp -SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred -CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 2223333 3488888777765 345999999875 3333334445557777777 56678888889987777543
Q ss_pred --CCCcceecc-CCCCEEEEEEeCCCCEEEEE----eCCCeEEEEECCCCe
Q 016187 309 --HSLPRSTCD-HEDGVTCLMWLGTSKYVVTG----CVDGKVRVWDSLSGD 352 (394)
Q Consensus 309 --~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg----~~dg~i~iwd~~~~~ 352 (394)
......... ....+..+.++|+++.|+.. ...++|++||+.+++
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 322222222 34567888899988766532 234789999998876
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=1.6e-13 Score=122.31 Aligned_cols=237 Identities=11% Similarity=0.109 Sum_probs=165.6
Q ss_pred ccCEEEEEEcCCCCEEEE-------EeCCCcEEEEeCCCCceEEEEe----cCCCCEEEEEEcCC-CCEEEEecCCCeEE
Q 016187 107 KDSVSSLAFSMDGQLLAS-------GGLDGLVQIWDPSSGNLKCTLE----GPGGGVEWVSWHPR-GHIVLAGSEDSTVW 174 (394)
Q Consensus 107 ~~~V~~v~~s~~g~~l~t-------~s~d~~i~vwd~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~s~d~~i~ 174 (394)
.....+++|+++|+++++ +..++.|.+||..+++...... ++...+..++++++ ++++++.. ...|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEE
Confidence 345678999999998887 5778899999988887643222 13356889999999 76565554 44799
Q ss_pred EEeCCccceeee-ecc----cCcCeEEEEECCCCCeEEEEeCC---------------CcEEEEcCCCCceEEEEcCCCC
Q 016187 175 MWNADRAAYLNM-FSG----HGSSVTCGDFTPDGKTICTGSDD---------------ATLRVWNPKSGENIHVIRGHPY 234 (394)
Q Consensus 175 iw~~~~~~~~~~-~~~----h~~~v~~~~~~~~~~~l~s~~~d---------------g~i~vwd~~~~~~~~~~~~~~~ 234 (394)
+|+.. ++.... ... ....+.++++.++|++.++...+ +.|..||.. ++......
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~---- 169 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT---- 169 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE----
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc----
Confidence 99988 554332 211 12357899999999888777655 567788865 44332222
Q ss_pred cccCeEEEEEc----CCCCEE-EEEeCCCcEEEEECC-CCc-----EEEEeccCC-CCEEEEEECCCCCeEEEEeCCCcE
Q 016187 235 HTEGLTCLTIS----ADSTLA-LSGSKDGSVHMVNIT-TGK-----VVSSLVSHT-DSIECIGFSRSSPWAATGSMDQKL 302 (394)
Q Consensus 235 ~~~~i~~~~~~----~~~~~l-~~g~~dg~i~i~d~~-~~~-----~~~~~~~h~-~~i~~v~~~~~~~~l~s~s~dg~i 302 (394)
.......++++ |+++.+ ++...++.|.+|++. +++ ....+..+. ..+..+++++++.++++...++.|
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 12345778899 999655 445678999999986 454 223333343 567889999999988888888999
Q ss_pred EEEeCCCCC-cceeccCCCCEEEEEEeCCCCEEE-EEeCCCeEEEEECCC
Q 016187 303 IIWDLQHSL-PRSTCDHEDGVTCLMWLGTSKYVV-TGCVDGKVRVWDSLS 350 (394)
Q Consensus 303 ~iwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~-sg~~dg~i~iwd~~~ 350 (394)
.+||..+.. ......+...+.++++++++++|. +...++.|..|++..
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999987433 223333446789999999999554 445568899998764
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=8.2e-14 Score=124.23 Aligned_cols=244 Identities=9% Similarity=0.072 Sum_probs=169.7
Q ss_pred eccCCcEEEEEEcCCCCcEEEE-------ecCCCeEEEEEcCCCeeeEeec----CcccCEEEEEEcCC-CCEEEEEeCC
Q 016187 61 SGHSDEVYSVACSPTDATLVAT-------GGGDDKGFFWRINQGDWASEIQ----GHKDSVSSLAFSMD-GQLLASGGLD 128 (394)
Q Consensus 61 ~~h~~~v~~~~~~p~~~~~las-------g~~d~~v~~w~~~~~~~~~~~~----~h~~~V~~v~~s~~-g~~l~t~s~d 128 (394)
...-....+++|+|+ +.++++ +..++.+.+|+..+++...... ++...+.+++++++ |+++++.. .
T Consensus 14 ~~~~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~ 91 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKN-GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-R 91 (314)
T ss_dssp ECCCTTCEEEEECTT-SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-T
T ss_pred hccCCCccCceECCC-CCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-C
Confidence 333445678999975 466666 5678899999988877643322 35677999999999 76555444 4
Q ss_pred CcEEEEeCCCCceEEE-Eec----CCCCEEEEEEcCCCCEEEEecCC---------------CeEEEEeCCccceeeeec
Q 016187 129 GLVQIWDPSSGNLKCT-LEG----PGGGVEWVSWHPRGHIVLAGSED---------------STVWMWNADRAAYLNMFS 188 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~s~d---------------~~i~iw~~~~~~~~~~~~ 188 (394)
..|.+||.. ++.... ... +...+..+++.++++++++...+ +.|..|+.. ++... +.
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VD 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-ec
Confidence 479999988 765433 221 12347889999999988877655 567777765 44332 22
Q ss_pred ccCcCeEEEEEC----CCCCeEEE-EeCCCcEEEEcCC-CCceE--EEEcCCCCcc-cCeEEEEEcCCCCEEEEEeCCCc
Q 016187 189 GHGSSVTCGDFT----PDGKTICT-GSDDATLRVWNPK-SGENI--HVIRGHPYHT-EGLTCLTISADSTLALSGSKDGS 259 (394)
Q Consensus 189 ~h~~~v~~~~~~----~~~~~l~s-~~~dg~i~vwd~~-~~~~~--~~~~~~~~~~-~~i~~~~~~~~~~~l~~g~~dg~ 259 (394)
.+......++|+ |+++.|+. ...++.|.+||+. +++.. ..+...+.+. .....++++++|.++++...++.
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 333456788999 99976554 4567899999976 34311 1111111122 34678999999999888888899
Q ss_pred EEEEECCCCcEEEEeccCCCCEEEEEECCCCCeE-EEEeCCCcEEEEeCCC
Q 016187 260 VHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWA-ATGSMDQKLIIWDLQH 309 (394)
Q Consensus 260 i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l-~s~s~dg~i~iwd~~~ 309 (394)
|.+||..+++.+..+..+...+.+++++|++.+| ++...++.|..|++..
T Consensus 249 i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999998777666666666789999999999844 5555668899999764
No 206
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.67 E-value=4.3e-14 Score=130.14 Aligned_cols=275 Identities=12% Similarity=0.093 Sum_probs=189.6
Q ss_pred CcEEEEecCC----CeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCceE
Q 016187 77 ATLVATGGGD----DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLK 142 (394)
Q Consensus 77 ~~~lasg~~d----~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s----------~d~~i~vwd~~~~~~~ 142 (394)
.++.++...+ +.|.+.|..+.+.+..+..-..+ .++++|||++|+++. .++.|.++|..+++.+
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv 162 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPI 162 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEE
Confidence 3444444433 79999999999999888755555 799999999888776 3678999999999988
Q ss_pred EEEecC-------CCCEEEEEEcCCCCEEEEecC--CCeEEEEeCCccceeeeecccCcCeEEEEECCCC-CeEEEEeCC
Q 016187 143 CTLEGP-------GGGVEWVSWHPRGHIVLAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDG-KTICTGSDD 212 (394)
Q Consensus 143 ~~~~~~-------~~~v~~~~~~~~~~~l~~~s~--d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d 212 (394)
..+.-. ......+.|+|++++++++.. ++.|.+.|+.+.+.+..+.-... ....|++ +.+++.+.|
T Consensus 163 ~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 163 ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRD 238 (426)
T ss_dssp EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETT
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCC
Confidence 776532 123456899999999888764 57899999999888777653221 2334433 455666778
Q ss_pred CcEEEEcCCCCceEEEEc-CCCCcccCe-EEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE--EEecc----------CC
Q 016187 213 ATLRVWNPKSGENIHVIR-GHPYHTEGL-TCLTISADSTLALSGSKDGSVHMVNITTGKVV--SSLVS----------HT 278 (394)
Q Consensus 213 g~i~vwd~~~~~~~~~~~-~~~~~~~~i-~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~--~~~~~----------h~ 278 (394)
|++.+.+..+++...... .......++ ..+.+.+++..++..+..+.+.+.|+...... ..+.. ..
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 887777775554332211 000011111 12457888887777778899999998765422 11110 01
Q ss_pred CCEEEEEECCCCCeEEEEeC----------CCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCC-EEEEEe-CCCeEEEE
Q 016187 279 DSIECIGFSRSSPWAATGSM----------DQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSK-YVVTGC-VDGKVRVW 346 (394)
Q Consensus 279 ~~i~~v~~~~~~~~l~s~s~----------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~sg~-~dg~i~iw 346 (394)
.....++++|++..++.... ++.|.++|+.+........-......++|+|+++ ++++.. .++.|.++
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 11223689999887665532 3579999998876655443334577899999999 888888 59999999
Q ss_pred ECCCCeEEEEe
Q 016187 347 DSLSGDCVRTF 357 (394)
Q Consensus 347 d~~~~~~~~~~ 357 (394)
|+.+++.++++
T Consensus 399 D~~t~kvv~tI 409 (426)
T 3c75_H 399 DAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 99999999987
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.67 E-value=8.7e-15 Score=146.40 Aligned_cols=272 Identities=14% Similarity=0.068 Sum_probs=178.4
Q ss_pred cCCCCEEEEEeCCCc---EEEEe--CC---CCceEEEEe------cCCCCEEEEEEcCCCCEEEEecCC-----CeEEEE
Q 016187 116 SMDGQLLASGGLDGL---VQIWD--PS---SGNLKCTLE------GPGGGVEWVSWHPRGHIVLAGSED-----STVWMW 176 (394)
Q Consensus 116 s~~g~~l~t~s~d~~---i~vwd--~~---~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~s~d-----~~i~iw 176 (394)
+|+|++++-...++. -.+|- .. .++....+. ++...+..++|+|+|++|+.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 488988876654432 44554 33 343332221 122257789999999988776543 469999
Q ss_pred eCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCc--------------EEEEcCCCCce--EEEEcCCCCcccCeE
Q 016187 177 NADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT--------------LRVWNPKSGEN--IHVIRGHPYHTEGLT 240 (394)
Q Consensus 177 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~--------------i~vwd~~~~~~--~~~~~~~~~~~~~i~ 240 (394)
|+.+++.+.. ..+...+..++|+|| +.|+.++.++. |++|++.+++. ...... ..+...+.
T Consensus 195 dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~~~~~~~~ 271 (741)
T 1yr2_A 195 GVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-PELPKRGH 271 (741)
T ss_dssp ETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC-TTCTTCEE
T ss_pred ECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc-CCCCeEEE
Confidence 9998876543 112222346789999 99988877654 88999877652 222222 12223478
Q ss_pred EEEEcCCCCEEEEEeCCC-----cEEEEECCCC--cEEEEeccCCCCEEEEEECCCCCeEEEEeCC----CcEEEEeCCC
Q 016187 241 CLTISADSTLALSGSKDG-----SVHMVNITTG--KVVSSLVSHTDSIECIGFSRSSPWAATGSMD----QKLIIWDLQH 309 (394)
Q Consensus 241 ~~~~~~~~~~l~~g~~dg-----~i~i~d~~~~--~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~d----g~i~iwd~~~ 309 (394)
.+.++|+|++++..+.++ .|++||+.++ +....+..+...+.... +|++..|+..+.+ +.|.+||+..
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 899999999888776543 8999999876 31445555555555543 4888888877654 4599999876
Q ss_pred C--Ccceecc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC-CCeEEEEeec-ccCceeEEEEccCCCEEE-E---Ee
Q 016187 310 S--LPRSTCD-HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL-SGDCVRTFSG-HRDAIQAISVSAHQDFLV-S---VS 380 (394)
Q Consensus 310 ~--~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~-~~~~~~~~~~-h~~~v~~l~~~~~~~~l~-s---~s 380 (394)
. ....... +...+..+.++ ++.++++...|+..+||... +++.++.+.. +.+.|..+.++|+++.|+ + ..
T Consensus 351 ~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 351 STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 3 2222233 33446667777 56778888899987777543 5667777765 356788999999987655 2 23
Q ss_pred CCCcEEEEeccC
Q 016187 381 LDGTARVFEIAD 392 (394)
Q Consensus 381 ~dg~i~iw~~~~ 392 (394)
..++|.+|++..
T Consensus 430 ~P~~i~~~d~~t 441 (741)
T 1yr2_A 430 QPATVLALDPAT 441 (741)
T ss_dssp EEEEEEEEETTT
T ss_pred CCCEEEEEECCC
Confidence 457899998754
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.66 E-value=3.5e-13 Score=119.48 Aligned_cols=232 Identities=12% Similarity=0.058 Sum_probs=161.9
Q ss_pred eeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 016187 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (394)
Q Consensus 60 ~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~ 139 (394)
+..+..-..+..|+|.++.++.+....+.|+.|+..+++.. .+. ....+.+++++++|+++++ . +..|.+||..++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ 83 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC
Confidence 33334445678899977888888888999999999877653 232 4567999999999996554 3 568999999888
Q ss_pred ceEEEEecC----CCCEEEEEEcCCCCEEEEecC-----------CCeEEEEeCCccceeeeecccCcCeEEEEECCCCC
Q 016187 140 NLKCTLEGP----GGGVEWVSWHPRGHIVLAGSE-----------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGK 204 (394)
Q Consensus 140 ~~~~~~~~~----~~~v~~~~~~~~~~~l~~~s~-----------d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 204 (394)
+........ ...++.+++.|+++++++... .+.|+.++.. ++. ..+..+......++|+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~-~~~~~~~~~pngi~~spdg~ 161 (297)
T 3g4e_A 84 SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHV-KKYFDQVDISNGLDWSLDHK 161 (297)
T ss_dssp EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCE-EEEEEEESBEEEEEECTTSC
T ss_pred cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCE-EEEeeccccccceEEcCCCC
Confidence 764333221 234788999999997765422 2344444443 222 22233344567899999998
Q ss_pred eE-EEEeCCCcEEEEcC--CCCceE--EEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC
Q 016187 205 TI-CTGSDDATLRVWNP--KSGENI--HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTD 279 (394)
Q Consensus 205 ~l-~s~~~dg~i~vwd~--~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~ 279 (394)
.| ++.+.++.|.+|++ .++... ..+............++++++|++.++....+.|..||..+++.+..+..+..
T Consensus 162 ~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~ 241 (297)
T 3g4e_A 162 IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD 241 (297)
T ss_dssp EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS
T ss_pred EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC
Confidence 76 45566789999986 455421 11211111223567899999999888888888999999999999988887778
Q ss_pred CEEEEEEC-CCCCeEEEEe
Q 016187 280 SIECIGFS-RSSPWAATGS 297 (394)
Q Consensus 280 ~i~~v~~~-~~~~~l~s~s 297 (394)
.+++++|. |++..|...+
T Consensus 242 ~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp BEEEEEEESGGGCEEEEEE
T ss_pred CceEEEEeCCCCCEEEEEc
Confidence 89999998 7877655444
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=3e-13 Score=125.36 Aligned_cols=236 Identities=11% Similarity=0.033 Sum_probs=166.1
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCC--eEEEEeCCccceee
Q 016187 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS--TVWMWNADRAAYLN 185 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~--~i~iw~~~~~~~~~ 185 (394)
.....|+|+++|+++++...++.|++||..++........... .. ++|+|+++.|+++..++ .|++++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4678999999999888888889999999988877655544333 33 89999999888887765 78888877654333
Q ss_pred ee----cccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcC--CCCcccC--eEEEEEcCC-CCEEEEEeC
Q 016187 186 MF----SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRG--HPYHTEG--LTCLTISAD-STLALSGSK 256 (394)
Q Consensus 186 ~~----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~--i~~~~~~~~-~~~l~~g~~ 256 (394)
.+ ......+.+++++|++..|+.+..++.|+.||+.++... .+.. ....... ...++++|+ +.++++...
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 33 224456778999995555666777899999999876532 2211 0001111 128999994 667777778
Q ss_pred CCcEEEEECCCCcEEEEeccCC---------------CCEEEEEECCCCCeEEEEe-CCCcEEEEeCCCCCcceeccC--
Q 016187 257 DGSVHMVNITTGKVVSSLVSHT---------------DSIECIGFSRSSPWAATGS-MDQKLIIWDLQHSLPRSTCDH-- 318 (394)
Q Consensus 257 dg~i~i~d~~~~~~~~~~~~h~---------------~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~-- 318 (394)
++.|+.|+.... +..+.++. .....+++++++.++++-. ..++|+.|++.........++
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~ 365 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVD 365 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCC
Confidence 899999997643 22332221 3478999999999888877 889999999655443332222
Q ss_pred -------------CCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Q 016187 319 -------------EDGVTCLMWLGTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 319 -------------~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~ 348 (394)
-.....+++.+++.++++-..+++|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 134788999999888888888888887754
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.66 E-value=6.4e-14 Score=128.97 Aligned_cols=268 Identities=15% Similarity=0.087 Sum_probs=189.7
Q ss_pred CCCCEEEEEeCC-----CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEec----------CCCeEEEEeCCcc
Q 016187 117 MDGQLLASGGLD-----GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMWNADRA 181 (394)
Q Consensus 117 ~~g~~l~t~s~d-----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s----------~d~~i~iw~~~~~ 181 (394)
++++++++.... +.|.+.|+.+++.+.++.....+ .+.++|+++.++++. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 567766655542 69999999999999888765555 799999999887765 3678999999998
Q ss_pred ceeeeeccc-------CcCeEEEEECCCCCeEEEEeC--CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCC-CEE
Q 016187 182 AYLNMFSGH-------GSSVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLA 251 (394)
Q Consensus 182 ~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l 251 (394)
+.+..+.-. ......++|+|||++|+.+.. +++|.+.|+.+++.+..+... .. ....|++ ..+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~-----g~--~~~~p~g~~~~ 232 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP-----DC--YHIFPASPTVF 232 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-----SE--EEEEEEETTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC-----Cc--eeeccCCCcEE
Confidence 877765421 123456789999999998864 578999999999887776531 11 2233333 556
Q ss_pred EEEeCCCcEEEEECCCCcEEEEe----ccCCCCE-EEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce----ec------
Q 016187 252 LSGSKDGSVHMVNITTGKVVSSL----VSHTDSI-ECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS----TC------ 316 (394)
Q Consensus 252 ~~g~~dg~i~i~d~~~~~~~~~~----~~h~~~i-~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~----~~------ 316 (394)
++.+.||++.+.++.+++..... .....++ ..+.+.+++..++..+..+++.+.|+....... ..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 66777888888888666554321 1111221 234678888877777788999999985432110 00
Q ss_pred c---CCCCEEEEEEeCCCCEEEEEeC----------CCeEEEEECCCCeEEEEeecccCceeEEEEccCCC-EEEEEe-C
Q 016187 317 D---HEDGVTCLMWLGTSKYVVTGCV----------DGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD-FLVSVS-L 381 (394)
Q Consensus 317 ~---~~~~v~~~~~~~~~~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s-~ 381 (394)
. .......++++++++++++... .+.|.++|..+.+.++++.... ..+.++|+||++ ++++.. .
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETT
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCC
Confidence 0 0111223678999887776642 3579999999999999987433 478999999999 888877 5
Q ss_pred CCcEEEEeccCCC
Q 016187 382 DGTARVFEIADFK 394 (394)
Q Consensus 382 dg~i~iw~~~~~~ 394 (394)
++.|.++|..++|
T Consensus 392 s~~VsVID~~t~k 404 (426)
T 3c75_H 392 TQTLHIYDAATGE 404 (426)
T ss_dssp TTEEEEEETTTCC
T ss_pred CCeEEEEECCCCC
Confidence 9999999998765
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.64 E-value=3.7e-13 Score=124.69 Aligned_cols=238 Identities=11% Similarity=0.050 Sum_probs=169.7
Q ss_pred CCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCC--cEEEEcCCCCceEE
Q 016187 150 GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDA--TLRVWNPKSGENIH 227 (394)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~ 227 (394)
.....++|+++++++++...++.|+.|+..++.......... ... ++|+|+++.|+++..++ .|.+|+...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 357889999999988888888999999998776554443322 233 89999999998888766 78889887665444
Q ss_pred EEcCCCC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE----eccCCCCE--EEEEECCC-CCeEEEEeCC
Q 016187 228 VIRGHPY-HTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSS----LVSHTDSI--ECIGFSRS-SPWAATGSMD 299 (394)
Q Consensus 228 ~~~~~~~-~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~----~~~h~~~i--~~v~~~~~-~~~l~s~s~d 299 (394)
.+..... ....+.+++++|++..|+.+..++.|+.||+.++..... ...+...- ..++|+|+ +.++++....
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 4411111 234567789999555555577789999999987763322 12222222 38999995 5566666778
Q ss_pred CcEEEEeCCCCCcceeccC---------------CCCEEEEEEeCCCCEEEEEe-CCCeEEEEECCCCeEEEEeecc---
Q 016187 300 QKLIIWDLQHSLPRSTCDH---------------EDGVTCLMWLGTSKYVVTGC-VDGKVRVWDSLSGDCVRTFSGH--- 360 (394)
Q Consensus 300 g~i~iwd~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~h--- 360 (394)
++|+.|+.... .....++ -.....+++.++++++++-+ .++.|+.|+..+++. ..+.++
T Consensus 289 ~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~ 366 (409)
T 3hrp_A 289 SSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDV 366 (409)
T ss_dssp TEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTC
T ss_pred CEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCC
Confidence 89999987643 1122221 13478899999999888877 899999999877764 455554
Q ss_pred ------------cCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 361 ------------RDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 361 ------------~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
-.....|++++++.++++-..+++|+.+.++
T Consensus 367 ~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 367 ASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp BSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 1347899999999999999999999988763
No 212
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.63 E-value=2.9e-13 Score=133.34 Aligned_cols=296 Identities=14% Similarity=0.126 Sum_probs=197.0
Q ss_pred EEEecCCCeEEEEEcCCCeeeEeecCccc-----------CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC
Q 016187 80 VATGGGDDKGFFWRINQGDWASEIQGHKD-----------SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGP 148 (394)
Q Consensus 80 lasg~~d~~v~~w~~~~~~~~~~~~~h~~-----------~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~ 148 (394)
+..++.++.++-+|..+++.+-.+..... ....+++ ++..++.++.|+.|..+|..+|+.+-.+...
T Consensus 80 vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~ 157 (677)
T 1kb0_A 80 MYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQNTF 157 (677)
T ss_dssp EEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEETT
T ss_pred EEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeecCC
Confidence 33455678888899988887755543211 0122333 4668888999999999999999988777644
Q ss_pred -C----CCEEEEEEcCCCCEEEEecC------CCeEEEEeCCccceeeeecccC--------------------------
Q 016187 149 -G----GGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHG-------------------------- 191 (394)
Q Consensus 149 -~----~~v~~~~~~~~~~~l~~~s~------d~~i~iw~~~~~~~~~~~~~h~-------------------------- 191 (394)
. ..+...-.- .+..++.++. ++.|+.+|..+++.+-.+....
T Consensus 158 ~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~ 236 (677)
T 1kb0_A 158 EGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWW 236 (677)
T ss_dssp TTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHH
T ss_pred cCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCcee
Confidence 1 111110001 1334555443 7899999999888765443211
Q ss_pred ------cCeEEEEECCCCCeEEEEeCCC-------------------cEEEEcCCCCceEEEEcCCCCc------ccCeE
Q 016187 192 ------SSVTCGDFTPDGKTICTGSDDA-------------------TLRVWNPKSGENIHVIRGHPYH------TEGLT 240 (394)
Q Consensus 192 ------~~v~~~~~~~~~~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~~~------~~~i~ 240 (394)
.....+++.|++.+++.++.++ +|..+|..+|+.+..+...+.. .....
T Consensus 237 ~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~ 316 (677)
T 1kb0_A 237 EAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMI 316 (677)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCE
T ss_pred EeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcE
Confidence 1113467888888888887664 5999999999987665532110 11233
Q ss_pred EEEEcCCC---CEEEEEeCCCcEEEEECCCCcEEEEeccCC-----------CCE------------------------E
Q 016187 241 CLTISADS---TLALSGSKDGSVHMVNITTGKVVSSLVSHT-----------DSI------------------------E 282 (394)
Q Consensus 241 ~~~~~~~~---~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~-----------~~i------------------------~ 282 (394)
.+....+| ..++.++.+|.++++|..+|+++..+.... .++ .
T Consensus 317 l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~ 396 (677)
T 1kb0_A 317 LADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWH 396 (677)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSS
T ss_pred EEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCC
Confidence 33444467 688999999999999999999886654211 011 1
Q ss_pred EEEECCCCCeEEEEeC-------------------------------------------CCcEEEEeCCCCCcceeccCC
Q 016187 283 CIGFSRSSPWAATGSM-------------------------------------------DQKLIIWDLQHSLPRSTCDHE 319 (394)
Q Consensus 283 ~v~~~~~~~~l~s~s~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~ 319 (394)
.++++|+..++++... .|.|..||+.+........+.
T Consensus 397 ~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~ 476 (677)
T 1kb0_A 397 PMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV 476 (677)
T ss_dssp CCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES
T ss_pred CceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC
Confidence 4678888887776543 277999999887766655555
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc-CceeEEEEccCCCEEEE
Q 016187 320 DGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHR-DAIQAISVSAHQDFLVS 378 (394)
Q Consensus 320 ~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~l~s 378 (394)
..+....+...+..++.|+.||.+++||..+|+.+.++.... ..-.-+.+..+|+.++.
T Consensus 477 ~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 477 SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 444444556678889999999999999999999999987433 22345667788865443
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.62 E-value=1.5e-13 Score=135.54 Aligned_cols=298 Identities=15% Similarity=0.192 Sum_probs=194.4
Q ss_pred EEEEecCCCeEEEEEcCCCeeeEeecCccc----------CE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 016187 79 LVATGGGDDKGFFWRINQGDWASEIQGHKD----------SV-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (394)
Q Consensus 79 ~lasg~~d~~v~~w~~~~~~~~~~~~~h~~----------~V-~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 147 (394)
.+..++.++.++-+|..+++.+-.+..+.. .+ ..+++ .+..++.++.|+.|..+|..+|+.+-.+..
T Consensus 72 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 72 VMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp EEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeeecC
Confidence 344456688899999999987766543221 01 11222 356888899999999999999998876654
Q ss_pred C-C-CCEEEEEEcC---CCCEEEEec------CCCeEEEEeCCccceeeeecc---------------------------
Q 016187 148 P-G-GGVEWVSWHP---RGHIVLAGS------EDSTVWMWNADRAAYLNMFSG--------------------------- 189 (394)
Q Consensus 148 ~-~-~~v~~~~~~~---~~~~l~~~s------~d~~i~iw~~~~~~~~~~~~~--------------------------- 189 (394)
. . .....+...| ++. ++.++ .++.|+.||..+++.+-.+..
T Consensus 150 ~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~ 228 (689)
T 1yiq_A 150 RADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYV 228 (689)
T ss_dssp CSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHH
T ss_pred cCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceee
Confidence 2 1 1001111112 344 44443 368999999999887644321
Q ss_pred ----cCcCeEEEEECCCCCeEEEEeCCCc-------------------EEEEcCCCCceEEEEcCCCC------cccCeE
Q 016187 190 ----HGSSVTCGDFTPDGKTICTGSDDAT-------------------LRVWNPKSGENIHVIRGHPY------HTEGLT 240 (394)
Q Consensus 190 ----h~~~v~~~~~~~~~~~l~s~~~dg~-------------------i~vwd~~~~~~~~~~~~~~~------~~~~i~ 240 (394)
+......+++.|++.+++.++.++. |..||..+|+.+-.+...+. ......
T Consensus 229 ~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~ 308 (689)
T 1yiq_A 229 EQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMI 308 (689)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred ecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcE
Confidence 1111124678888889999888764 99999999998776653211 111222
Q ss_pred EEEEcCCCC---EEEEEeCCCcEEEEECCCCcEEEEeccCC-CC------------------------------------
Q 016187 241 CLTISADST---LALSGSKDGSVHMVNITTGKVVSSLVSHT-DS------------------------------------ 280 (394)
Q Consensus 241 ~~~~~~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~h~-~~------------------------------------ 280 (394)
......+|+ .++.++.+|.++++|..+|+++....... ..
T Consensus 309 l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg 388 (689)
T 1yiq_A 309 LAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA 388 (689)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS
T ss_pred EEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc
Confidence 233333554 78889999999999999999874432110 00
Q ss_pred --EEEEEECCCCCeEEEEeC---------------------------------------------CCcEEEEeCCCCCcc
Q 016187 281 --IECIGFSRSSPWAATGSM---------------------------------------------DQKLIIWDLQHSLPR 313 (394)
Q Consensus 281 --i~~v~~~~~~~~l~s~s~---------------------------------------------dg~i~iwd~~~~~~~ 313 (394)
-..++++|+..++++... +|.|..||+.+....
T Consensus 389 ~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~ 468 (689)
T 1yiq_A 389 HDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAA 468 (689)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEE
T ss_pred cCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeE
Confidence 012678888777766532 377999999887666
Q ss_pred eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCce-eEEEEccCCCE-EEEE
Q 016187 314 STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAI-QAISVSAHQDF-LVSV 379 (394)
Q Consensus 314 ~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~~-l~s~ 379 (394)
....+...+....+...+.+|+.|+.||.++.||.++|+.+.++....+.+ .-+.|..+|+. ++..
T Consensus 469 W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 469 WEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred eEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 555444444333556678899999999999999999999999887543322 45777788874 4433
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.61 E-value=1e-12 Score=116.97 Aligned_cols=235 Identities=12% Similarity=0.075 Sum_probs=161.9
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~ 136 (394)
...+..+.......+|+|++..++.++..++.++.|+. +++ ...+..+...+..++++++|+++++...++.|.+|+.
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 34444455667888999976668888889999999997 454 3445556677999999999997776666688999998
Q ss_pred CCCceEEEEecC----CCCEEEEEEcCCCCEEEE----ecC-------------CCeEEEEeCCccceeeeecccCcCeE
Q 016187 137 SSGNLKCTLEGP----GGGVEWVSWHPRGHIVLA----GSE-------------DSTVWMWNADRAAYLNMFSGHGSSVT 195 (394)
Q Consensus 137 ~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~s~-------------d~~i~iw~~~~~~~~~~~~~h~~~v~ 195 (394)
. ++........ ...++.+++.|+|+++++ |.. .+.|+.|+..+++..... ......
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~ 191 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPN 191 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCc
Confidence 6 6543222111 124567999999998886 432 256788887666544333 334567
Q ss_pred EEEECCCCCeEEEEeCC------CcEEEEcCCCCceEE---EEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 016187 196 CGDFTPDGKTICTGSDD------ATLRVWNPKSGENIH---VIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT 266 (394)
Q Consensus 196 ~~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~ 266 (394)
.++|+|+++.|+.+... +.|.+|++..+. +. .+.. ........+.++++|++.++. .+ .|.+|+.
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~--~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~- 265 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS--VPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS- 265 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC--CSSSCCCSEEECTTSCEEECC-SS-EEEEECT-
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE--CCCCCCCeEEECCCCCEEEec-CC-cEEEECC-
Confidence 89999999988777665 689999986543 21 1111 112234467889999955544 44 4999998
Q ss_pred CCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEE
Q 016187 267 TGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLI 303 (394)
Q Consensus 267 ~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~ 303 (394)
.++.+..+..+. .+.+++|++++..|..++.++..+
T Consensus 266 ~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 266 DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 577777766554 588899999988887777664333
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=1.3e-13 Score=124.89 Aligned_cols=260 Identities=12% Similarity=0.065 Sum_probs=171.3
Q ss_pred cCEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCceEEEEe-------cCCCCEEEEEEcCCCCEEEEecC-----CCeE
Q 016187 108 DSVSSLAFSMDGQLLASGG--LDGLVQIWDPSSGNLKCTLE-------GPGGGVEWVSWHPRGHIVLAGSE-----DSTV 173 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s--~d~~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~s~-----d~~i 173 (394)
..+..++++|+|+++++.. .++.++||.+.+++.. .+. .+...+..+++.++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999998864 2343555555455432 221 23357899999999887666543 5789
Q ss_pred EEEeCCccceeeeecc------cCcCeEEEEECCCCCeE-EEEe---CCCcEEEEcCCCCceEEEEcCCCCc-ccCeEEE
Q 016187 174 WMWNADRAAYLNMFSG------HGSSVTCGDFTPDGKTI-CTGS---DDATLRVWNPKSGENIHVIRGHPYH-TEGLTCL 242 (394)
Q Consensus 174 ~iw~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l-~s~~---~dg~i~vwd~~~~~~~~~~~~~~~~-~~~i~~~ 242 (394)
.+||+.+++.++.+.. +...+..+++++++..+ ++-. .++.|.+||+.+++....+..++.. ..+ .
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~---~ 172 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED---I 172 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS---C
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc---c
Confidence 9999988876655432 22346789999865444 5554 6789999999888766555432111 111 2
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCC-cEEEEeCC---CCC-c-----
Q 016187 243 TISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQ-KLIIWDLQ---HSL-P----- 312 (394)
Q Consensus 243 ~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg-~i~iwd~~---~~~-~----- 312 (394)
.+.+++..+.+.+.++.++.|. ..++.++++|++.+|+.+..++ ++..++.. ... .
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp CCEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred ceeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 2344666666677777775553 2457899999999888887766 44444421 100 0
Q ss_pred --ceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeec-ccCceeEEEEccCCCEEEEEeCCCcE
Q 016187 313 --RSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSG-HRDAIQAISVSAHQDFLVSVSLDGTA 385 (394)
Q Consensus 313 --~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~s~dg~i 385 (394)
....++......+++.+++.++++...++.|.+||..+++....... +.....+++|.+++.++++.+..+.+
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 01112233455688999999999999999999999866764433332 24457899999999988887755433
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=3.8e-12 Score=112.75 Aligned_cols=224 Identities=11% Similarity=0.069 Sum_probs=154.7
Q ss_pred CCEEEEEEcCCC-CEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEE
Q 016187 150 GGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHV 228 (394)
Q Consensus 150 ~~v~~~~~~~~~-~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 228 (394)
.-.....|+|++ .++++....+.|+.|+..+++.. .+ .....+.+++++|+|+++++ . +..|.+||..+++....
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEE
Confidence 345678899964 56677778899999999876542 22 24567889999999995554 3 56799999987764332
Q ss_pred EcCCC-CcccCeEEEEEcCCCCEEEEEeC-----------CCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeE-EE
Q 016187 229 IRGHP-YHTEGLTCLTISADSTLALSGSK-----------DGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWA-AT 295 (394)
Q Consensus 229 ~~~~~-~~~~~i~~~~~~~~~~~l~~g~~-----------dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l-~s 295 (394)
..... .....+..+.++|+|+++++... .+.|..++.. ++.. .+..+....+.++|+|+++.| ++
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcCCCCEEEEe
Confidence 22111 11234788999999997776532 2344444443 3332 233334557889999999866 45
Q ss_pred EeCCCcEEEEeCC--CCCcc---eec---cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEE
Q 016187 296 GSMDQKLIIWDLQ--HSLPR---STC---DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAI 367 (394)
Q Consensus 296 ~s~dg~i~iwd~~--~~~~~---~~~---~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 367 (394)
.+.+++|.+|++. ..... ... .+......+++.+++++.++....+.|.+||..+++.+..+..+...++++
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~ 246 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSC 246 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEE
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEE
Confidence 5667899999873 32211 111 123457788999999888888888899999999999999998877789999
Q ss_pred EEc-cCCCEEEEE
Q 016187 368 SVS-AHQDFLVSV 379 (394)
Q Consensus 368 ~~~-~~~~~l~s~ 379 (394)
+|. |+++.|..+
T Consensus 247 ~f~g~d~~~L~vt 259 (297)
T 3g4e_A 247 CFGGKNYSEMYVT 259 (297)
T ss_dssp EEESGGGCEEEEE
T ss_pred EEeCCCCCEEEEE
Confidence 998 887755433
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.59 E-value=7.8e-12 Score=112.31 Aligned_cols=225 Identities=15% Similarity=0.068 Sum_probs=156.0
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~ 144 (394)
.-..+.+|+|+++.++.+...++.+..|+..+++... +. +...+.+++|+|+|+++++. .+ .|.+||..+++....
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence 3456788999777888888888999999998876533 32 34679999999999877754 44 499999988876433
Q ss_pred EecC----CCCEEEEEEcCCCCEEEEecC------CCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEE-EeCCC
Q 016187 145 LEGP----GGGVEWVSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT-GSDDA 213 (394)
Q Consensus 145 ~~~~----~~~v~~~~~~~~~~~l~~~s~------d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~~~dg 213 (394)
.... ...+..++++|+++++++... .+.|+.++ +++.. .+..+......++|+|+++.|+. .+.++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence 2211 135788999999997765542 24566666 34332 22233345678999999987654 45578
Q ss_pred cEEEEcCC--CC-ce--EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEEC-
Q 016187 214 TLRVWNPK--SG-EN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFS- 287 (394)
Q Consensus 214 ~i~vwd~~--~~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~- 287 (394)
.|.+||+. ++ +. ...+............+.++++|.++++...++.|..|+. +++.+..+..+...+.+++|+
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEec
Confidence 99999975 55 21 1112111111234567899999998888777889999998 677777777677789999998
Q ss_pred CCCCeEEEEe
Q 016187 288 RSSPWAATGS 297 (394)
Q Consensus 288 ~~~~~l~s~s 297 (394)
+++..|+.++
T Consensus 281 ~d~~~L~vt~ 290 (326)
T 2ghs_A 281 PDASRLLVTS 290 (326)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEEe
Confidence 8877665443
No 218
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.58 E-value=6.5e-14 Score=127.22 Aligned_cols=174 Identities=12% Similarity=0.023 Sum_probs=131.9
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe---------eeE-eecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEe
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGD---------WAS-EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWD 135 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~---------~~~-~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd 135 (394)
.++.|+++|.. .++++|+.+ .+++|++...+ +.. ....+.. |+.|+| ++.+|+++ .++.|++||
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 58889999964 567777776 55569864332 111 1223556 999999 99999999 889999999
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcE
Q 016187 136 PSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (394)
Q Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 215 (394)
+.+.........+..++..+.+.+.. +++++.||.+.+|++.++.... +...|+|++|+|+| ++.|..||++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 98776655666677778888777653 8888999999999998776543 45689999999999 7889999999
Q ss_pred EEEcCCCCce--EEEEcCC------CCcccCeEEEEEcCCCCEEEE
Q 016187 216 RVWNPKSGEN--IHVIRGH------PYHTEGLTCLTISADSTLALS 253 (394)
Q Consensus 216 ~vwd~~~~~~--~~~~~~~------~~~~~~i~~~~~~~~~~~l~~ 253 (394)
++|++..++. ...+... ..+...+.++.|.+++.++++
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999877664 4455211 124466999999999988876
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.58 E-value=2.3e-11 Score=111.43 Aligned_cols=298 Identities=12% Similarity=0.071 Sum_probs=189.3
Q ss_pred EEEEecCCCeEEEEEcCCCeeeEeecCc---------ccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC
Q 016187 79 LVATGGGDDKGFFWRINQGDWASEIQGH---------KDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPG 149 (394)
Q Consensus 79 ~lasg~~d~~v~~w~~~~~~~~~~~~~h---------~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~ 149 (394)
.+..++.++.+..+|..+++.+-..... ...+.+. ...++..++.++.++.|..+|..+|+.+.......
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~ 133 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG 133 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred EEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC
Confidence 3445667889999999888876544332 1223222 22245677888899999999999999876665432
Q ss_pred CCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCe-----EEEEECCCCCeEEEEeCCCcEEEEcCCCCc
Q 016187 150 GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSV-----TCGDFTPDGKTICTGSDDATLRVWNPKSGE 224 (394)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 224 (394)
........ .+..++.++.++.+..+|..+++.+-.+....... ..... .+..++.++.++.|..+|..+++
T Consensus 134 ~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 134 EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCC
T ss_pred ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCc
Confidence 21111111 14477788899999999998887665544322110 11111 24578888889999999999998
Q ss_pred eEEEEcCCCCc-c---cCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeC
Q 016187 225 NIHVIRGHPYH-T---EGLTCLTISA--DSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSM 298 (394)
Q Consensus 225 ~~~~~~~~~~~-~---~~i~~~~~~~--~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~ 298 (394)
.+......... . ..+..+...| .+..++.++.++.+..+|..+++.+-.... .....+... +..+..++.
T Consensus 210 ~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~~ 285 (376)
T 3q7m_A 210 MIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIVD--GNRIYLVDQ 285 (376)
T ss_dssp EEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEEE--TTEEEEEET
T ss_pred EEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceEE--CCEEEEEcC
Confidence 76655421100 0 0000000111 246677788899999999999988765542 233444443 556777888
Q ss_pred CCcEEEEeCCCCCcceecc-C-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeE-EEEccCCCE
Q 016187 299 DQKLIIWDLQHSLPRSTCD-H-EDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQA-ISVSAHQDF 375 (394)
Q Consensus 299 dg~i~iwd~~~~~~~~~~~-~-~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~-l~~~~~~~~ 375 (394)
++.+..+|..+........ . ...+..... .+..|+.++.+|.|+++|..+++.+..+......+.. ... .+..
T Consensus 286 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~ 361 (376)
T 3q7m_A 286 NDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGK 361 (376)
T ss_dssp TCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTE
T ss_pred CCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCE
Confidence 9999999998765544332 1 111222222 2468888999999999999999998877754444432 222 2457
Q ss_pred EEEEeCCCcEEEEe
Q 016187 376 LVSVSLDGTARVFE 389 (394)
Q Consensus 376 l~s~s~dg~i~iw~ 389 (394)
|+.++.+|.|..|+
T Consensus 362 l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 362 LLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEEBTTSCEEEEE
T ss_pred EEEEeCCCEEEEEe
Confidence 77899999999886
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=2.6e-12 Score=114.23 Aligned_cols=234 Identities=10% Similarity=0.057 Sum_probs=159.0
Q ss_pred EEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCC
Q 016187 144 TLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKS 222 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 222 (394)
.+...........|+|+++ ++++...++.|..|+.. +. ...+..+...+..++++++|+++++...++.|.+|+..
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 3343445567889999998 66777788999999884 33 34444566678899999999977766667889999985
Q ss_pred CceEEEEcCCC-CcccCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEECCCCcEEEEeccCCCCEEEE
Q 016187 223 GENIHVIRGHP-YHTEGLTCLTISADSTLALS----GSK-------------DGSVHMVNITTGKVVSSLVSHTDSIECI 284 (394)
Q Consensus 223 ~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~----g~~-------------dg~i~i~d~~~~~~~~~~~~h~~~i~~v 284 (394)
++......... .....+..++++|+|+++++ |.. .+.|..+|..+++..... .....+.+
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl 193 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGL 193 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcce
Confidence 54322211110 11124567899999998886 332 356888888766543322 34567889
Q ss_pred EECCCCCeEEEEeCC------CcEEEEeCCCCCcc---eec-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE
Q 016187 285 GFSRSSPWAATGSMD------QKLIIWDLQHSLPR---STC-DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV 354 (394)
Q Consensus 285 ~~~~~~~~l~s~s~d------g~i~iwd~~~~~~~---~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 354 (394)
+|+|++..|+.+... +.|.+|++...... ... ........+++.+++++.++ +.+ .|.+|+. .++.+
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~ 270 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLL 270 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEE
Confidence 999999988777665 68999987643211 010 11223446788899985544 444 4999997 67788
Q ss_pred EEeecccCceeEEEEccCCCEEEEEeCCCcEE
Q 016187 355 RTFSGHRDAIQAISVSAHQDFLVSVSLDGTAR 386 (394)
Q Consensus 355 ~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~ 386 (394)
..+..+. .+..++|+++++.|..++.++..+
T Consensus 271 ~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 271 GHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 8777655 588999999998888887765443
No 221
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.55 E-value=4.4e-13 Score=120.37 Aligned_cols=291 Identities=16% Similarity=0.132 Sum_probs=189.3
Q ss_pred EEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcC
Q 016187 80 VATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP 159 (394)
Q Consensus 80 lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (394)
+..++.++.+..|| .+++.......+...+.++...++|.+++ ++.+ |..+|. +++....+.............
T Consensus 33 l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~- 106 (330)
T 3hxj_A 33 IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF- 106 (330)
T ss_dssp EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCEEEE-
T ss_pred EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCceEE-
Confidence 34456778888999 78887666655556678888888876544 4444 888886 565432222222112222222
Q ss_pred CCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCe
Q 016187 160 RGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGL 239 (394)
Q Consensus 160 ~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i 239 (394)
+..+..++.++.+..++.. ++.......+...+.++...+++. |+.++.++.|..+|.. ++........ ...+
T Consensus 107 -~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~---~~~~ 179 (330)
T 3hxj_A 107 -EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTN---DAIT 179 (330)
T ss_dssp -TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECS---SCCC
T ss_pred -CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecC---CCce
Confidence 4567778888999999988 655544444444455556666665 6667788999999998 7665554421 2335
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCC
Q 016187 240 TCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHE 319 (394)
Q Consensus 240 ~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 319 (394)
.++...+++.+++ ++ +.|..+| .+++.+.........+.++...+++.+ ..++.++.+..++.............
T Consensus 180 ~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~~g~~~~~~~~~~ 254 (330)
T 3hxj_A 180 SAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINPDGTEKWRFKTGK 254 (330)
T ss_dssp SCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECTTSCEEEEEECSS
T ss_pred eeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECCCCCEeEEeeCCC
Confidence 5566777777555 44 8899999 777777666655667888888888754 44666778888875433222211122
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 320 DGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 320 ~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
..+..+...++ ..|..++.+|.|..+|. +++.+..+......+.++...+++.++ .++.+|.+++...+
T Consensus 255 ~~~~~~~~~~~-g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 255 RIESSPVIGNT-DTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIY-FGTRNGKFYALFNL 323 (330)
T ss_dssp CCCSCCEECTT-SCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEE-EECTTSCEEEEEC-
T ss_pred CccccceEcCC-CeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEE-EEcCCCeEEEEecc
Confidence 22233444434 46777888989999996 788777776656677888887777654 58899999988754
No 222
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.54 E-value=2.1e-13 Score=123.81 Aligned_cols=170 Identities=12% Similarity=0.104 Sum_probs=134.7
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-----------eEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEe
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGN-----------LKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWN 177 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~ 177 (394)
+++.+++++...++++|+.++ +++|++...+ ...... ... |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999884 6679854332 112233 445 999999 88899888 889999999
Q ss_pred CCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC
Q 016187 178 ADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD 257 (394)
Q Consensus 178 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d 257 (394)
+.+.........|...+.++.+.+. .+++++.||.|.+||+.+++... +...++|++|+|+| ++.|..|
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSE--EEEEETT
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCc--eEEEEcC
Confidence 9876655556677778888777654 38999999999999999877543 23479999999999 6789999
Q ss_pred CcEEEEECCCCcE--EEEe------c---cCCCCEEEEEECCCCCeEEE
Q 016187 258 GSVHMVNITTGKV--VSSL------V---SHTDSIECIGFSRSSPWAAT 295 (394)
Q Consensus 258 g~i~i~d~~~~~~--~~~~------~---~h~~~i~~v~~~~~~~~l~s 295 (394)
|++++|+...+.. ..++ . +|...|.+|.|.++..++++
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9999999877765 4555 2 36788999999999998876
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.53 E-value=1.1e-12 Score=118.94 Aligned_cols=269 Identities=10% Similarity=0.037 Sum_probs=176.7
Q ss_pred eEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCCceEEEEecCC-------C
Q 016187 88 KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG----------LDGLVQIWDPSSGNLKCTLEGPG-------G 150 (394)
Q Consensus 88 ~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s----------~d~~i~vwd~~~~~~~~~~~~~~-------~ 150 (394)
++.+.|..+++.+.++..-..+ .+.|+|||++++++. .++.|.+||+.+++...++..+. .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999988755556 799999999888886 36889999999999998876431 2
Q ss_pred CEEEEEEcCCCCEEEEecC--CCeEEE--EeCCccceeeeecccCcCeEEEEECCCCC-eEEEEeCCCcEEEEcCCC---
Q 016187 151 GVEWVSWHPRGHIVLAGSE--DSTVWM--WNADRAAYLNMFSGHGSSVTCGDFTPDGK-TICTGSDDATLRVWNPKS--- 222 (394)
Q Consensus 151 ~v~~~~~~~~~~~l~~~s~--d~~i~i--w~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg~i~vwd~~~--- 222 (394)
....++++|++++++++.. +..+.+ +|..+ +..+..-. |..+.|+++ .+++.+.|+.+.+.|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~----~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS----CFHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS----CCCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC----ceEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 3456899999998888764 467888 88876 23332111 112234443 445566788887788765
Q ss_pred --CceEEEE-cCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC--cEEEEeccC----------CCCEEEEEEC
Q 016187 223 --GENIHVI-RGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG--KVVSSLVSH----------TDSIECIGFS 287 (394)
Q Consensus 223 --~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~--~~~~~~~~h----------~~~i~~v~~~ 287 (394)
++..... ........+. . .+++..++..+. +.+.+.|+.+. +.+..+... ......++++
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred cCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc
Confidence 2211000 0011112222 3 555555555555 99999998654 233322111 0111226899
Q ss_pred CCCCeEEEEeC---------CCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCE-EEEEe-CCCeEEEEECCCCeEEEE
Q 016187 288 RSSPWAATGSM---------DQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKY-VVTGC-VDGKVRVWDSLSGDCVRT 356 (394)
Q Consensus 288 ~~~~~l~s~s~---------dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~sg~-~dg~i~iwd~~~~~~~~~ 356 (394)
|++..++.+.. ++.+.++|+.+........-......++++|++++ +++.. .++.|.++|+.+++.+++
T Consensus 273 ~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 273 KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEE
Confidence 99987776532 23566999988765544433335788999999985 55555 599999999999999999
Q ss_pred eecccCceeEEEEcc
Q 016187 357 FSGHRDAIQAISVSA 371 (394)
Q Consensus 357 ~~~h~~~v~~l~~~~ 371 (394)
+.....+ +.+++.+
T Consensus 353 I~vg~~P-~~i~~~~ 366 (368)
T 1mda_H 353 VELDKGP-ESLSVQN 366 (368)
T ss_dssp CCCCSCC-CEEECCC
T ss_pred EECCCCC-CEEEeec
Confidence 9865543 5666654
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=7.1e-13 Score=120.04 Aligned_cols=264 Identities=9% Similarity=0.004 Sum_probs=174.5
Q ss_pred CcEEEEEEcCCCCcEEEEec--CCCeEEEEEcCCCeeeE------eecCcccCEEEEEEcCCCCEEEEEeC-----CCcE
Q 016187 65 DEVYSVACSPTDATLVATGG--GDDKGFFWRINQGDWAS------EIQGHKDSVSSLAFSMDGQLLASGGL-----DGLV 131 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~--~d~~v~~w~~~~~~~~~------~~~~h~~~V~~v~~s~~g~~l~t~s~-----d~~i 131 (394)
.....|+++|+ ++++++.. .++.++||.+.+++... ...+|...+.+++++++|+++++-.. +..|
T Consensus 17 ~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPD-GRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTT-SCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCC-CCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999995 56777743 23335677665555331 11235678999999999987665544 5789
Q ss_pred EEEeCCCCceEEEEecC------CCCEEEEEEcCCC-CEEEEec---CCCeEEEEeCCccceeeeecccCcCeE-EEEEC
Q 016187 132 QIWDPSSGNLKCTLEGP------GGGVEWVSWHPRG-HIVLAGS---EDSTVWMWNADRAAYLNMFSGHGSSVT-CGDFT 200 (394)
Q Consensus 132 ~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~s---~d~~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~ 200 (394)
.+||+.+++.+..+..+ ...+..+++.+++ ..+++-+ .++.|.+|+..+++..+.+.+|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999999877666532 2346789999864 4556655 678999999988877776655432110 13445
Q ss_pred CCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC-cEEEEECC---CCc-----EE
Q 016187 201 PDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-SVHMVNIT---TGK-----VV 271 (394)
Q Consensus 201 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg-~i~i~d~~---~~~-----~~ 271 (394)
++|..+.+.+.++.++.|.. .+..++++|+++.++.+...+ .|..++.. .+. ..
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~-----------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 238 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHL-----------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG 238 (343)
T ss_dssp ETTEECBEECTTSCEECCCC-----------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred ECCEEEEeccCCCceeceec-----------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence 57777777778888766631 356789999999888776665 55555431 111 00
Q ss_pred E--EeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceecc--CCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Q 016187 272 S--SLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCD--HEDGVTCLMWLGTSKYVVTGCVDGKVRVW 346 (394)
Q Consensus 272 ~--~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~sg~~dg~i~iw 346 (394)
. ...++......+++++++.++++...++.|.+||........... ....+.++++.+++.++++.+..+.+.+|
T Consensus 239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 0 111233456678999999999999899999999983332222221 23457889999988887777655555444
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.51 E-value=1.1e-12 Score=130.16 Aligned_cols=241 Identities=15% Similarity=0.129 Sum_probs=157.1
Q ss_pred cCcccCEEEEEEcCCCCEEEEE-----eCCCcEEEEeCCCCceEEE-EecCCCCEEEEEEcCCCCEEEEecCCC------
Q 016187 104 QGHKDSVSSLAFSMDGQLLASG-----GLDGLVQIWDPSSGNLKCT-LEGPGGGVEWVSWHPRGHIVLAGSEDS------ 171 (394)
Q Consensus 104 ~~h~~~V~~v~~s~~g~~l~t~-----s~d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~s~d~------ 171 (394)
.+|...+..++|||||++||-+ +....|++||+.+|+.+.. +... ....++|+ +++.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC----
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccccc
Confidence 3466679999999999988833 2335799999999986532 2211 12357899 999888877763
Q ss_pred -------eEEEEeCCccce----eeeecc-cCcCeEEEEECCCCCeEEEEeC----CCcEEEEcCCCCc-eEEEEcCCCC
Q 016187 172 -------TVWMWNADRAAY----LNMFSG-HGSSVTCGDFTPDGKTICTGSD----DATLRVWNPKSGE-NIHVIRGHPY 234 (394)
Q Consensus 172 -------~i~iw~~~~~~~----~~~~~~-h~~~v~~~~~~~~~~~l~s~~~----dg~i~vwd~~~~~-~~~~~~~~~~ 234 (394)
.|++|++.+... +..... |...+..+.|+|||++|+.... ...|.++|+.++. ....+...
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~-- 279 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD-- 279 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS--
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC--
Confidence 499999876542 222333 4455778899999998854332 3589999987763 33344332
Q ss_pred cccCeEEEEEcCCCCEE-EEEeCC---CcEEEEECCCCcE--EEEeccCCCCEEEEEECCCCCeEEEEeCCC---cEEEE
Q 016187 235 HTEGLTCLTISADSTLA-LSGSKD---GSVHMVNITTGKV--VSSLVSHTDSIECIGFSRSSPWAATGSMDQ---KLIIW 305 (394)
Q Consensus 235 ~~~~i~~~~~~~~~~~l-~~g~~d---g~i~i~d~~~~~~--~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg---~i~iw 305 (394)
....... +++++..+ +....+ +.|..+++.++.. ...+..|...+. .|++++.+|+....++ .|++|
T Consensus 280 -~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 280 -LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp -SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred -CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 2233333 55555544 444443 6799999987643 345556666654 8889888877665544 68899
Q ss_pred eCCCCCccee-ccCCCCEEEEEEeCCCCEEEEEeCC----CeEEEEECCCCeE
Q 016187 306 DLQHSLPRST-CDHEDGVTCLMWLGTSKYVVTGCVD----GKVRVWDSLSGDC 353 (394)
Q Consensus 306 d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~d----g~i~iwd~~~~~~ 353 (394)
++........ ......+..+.+++++..|+....+ +.|+.||+.+++.
T Consensus 356 d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 356 DYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 9875433322 2233346666777788776655544 8899999887753
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.51 E-value=1.3e-12 Score=118.26 Aligned_cols=247 Identities=10% Similarity=-0.020 Sum_probs=168.4
Q ss_pred cEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEec----------CCCeEEEEeCCccceeeeeccc-------Cc
Q 016187 130 LVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----------EDSTVWMWNADRAAYLNMFSGH-------GS 192 (394)
Q Consensus 130 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s----------~d~~i~iw~~~~~~~~~~~~~h-------~~ 192 (394)
+|.+.|..+++.+.++.....+ .+.++|+++.++++. .++.|.+||..+.+.+..+... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999999988766666 699999999887775 3688999999999988877543 12
Q ss_pred CeEEEEECCCCCeEEEEeC--CCcEEE--EcCCCCceEEEEcCCCCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEECCC
Q 016187 193 SVTCGDFTPDGKTICTGSD--DATLRV--WNPKSGENIHVIRGHPYHTEGLTCLTISADS-TLALSGSKDGSVHMVNITT 267 (394)
Q Consensus 193 ~v~~~~~~~~~~~l~s~~~--dg~i~v--wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~g~~dg~i~i~d~~~ 267 (394)
....++|+|||++++.+.. +..|.+ +|+.+ +..+... +. ..+.|++ ..+++.+.|+++.+.++.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-----~~--~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-----SC--FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-----SC--CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-----Cc--eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 3457899999999998864 467888 99876 3444311 01 1122333 3455667788888888876
Q ss_pred -----CcEEEE----eccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce--ecc-----------CCCCEEEE
Q 016187 268 -----GKVVSS----LVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS--TCD-----------HEDGVTCL 325 (394)
Q Consensus 268 -----~~~~~~----~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~--~~~-----------~~~~v~~~ 325 (394)
++.... +.....+. . .+++..++..+. +.+.+.|+....... ... .......+
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v 269 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV 269 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCE
T ss_pred ccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceee
Confidence 432211 11122333 3 555555555556 899999985421110 000 11112226
Q ss_pred EEeCCCCEEEEEeC-C--------CeEEEEECCCCeEEEEeecccCceeEEEEccCCC-EEEEEe-CCCcEEEEeccCCC
Q 016187 326 MWLGTSKYVVTGCV-D--------GKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQD-FLVSVS-LDGTARVFEIADFK 394 (394)
Q Consensus 326 ~~~~~~~~l~sg~~-d--------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-~l~s~s-~dg~i~iw~~~~~~ 394 (394)
++++++++++.+.. . +.+.++|+.+.+.++++.... ....|+|++|++ ++++.. .+++|.++|+.++|
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 79999988886543 2 356699999999999887544 578999999997 566666 59999999998764
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.50 E-value=1.3e-10 Score=104.20 Aligned_cols=220 Identities=10% Similarity=0.014 Sum_probs=147.9
Q ss_pred EEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeec
Q 016187 110 VSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS 188 (394)
Q Consensus 110 V~~v~~s~~g~-~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~ 188 (394)
..+..|+|++. ++++...++.|.+||..+++.. .+. ....+.+++|.|+++++++. ...|.+|+..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEEEee
Confidence 45788999754 5566667889999999887653 233 24578999999999877764 3459999987766433221
Q ss_pred c---c-CcCeEEEEECCCCCeEEEEeC------CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEE-EEeCC
Q 016187 189 G---H-GSSVTCGDFTPDGKTICTGSD------DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKD 257 (394)
Q Consensus 189 ~---h-~~~v~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~g~~d 257 (394)
. . ...+..++++|+|+++++... .+.|..++ +++. ..+.. .......++++|+++.++ +.+.+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~---~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFA---DISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEE---EESSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeC---CCcccCCeEEcCCCCEEEEEECCC
Confidence 1 1 235788999999997665542 24555555 4443 22211 123467889999998664 44567
Q ss_pred CcEEEEECC--CC-c-----EEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEe-
Q 016187 258 GSVHMVNIT--TG-K-----VVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWL- 328 (394)
Q Consensus 258 g~i~i~d~~--~~-~-----~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~- 328 (394)
+.|.+|++. ++ + .+..+......+..+.+++++.+.++...++.|..|+...........+...+++++|.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEES
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEEEec
Confidence 899999985 55 2 23333334456788999999988777767789999998543333333344568999998
Q ss_pred CCCCEEEEEeC
Q 016187 329 GTSKYVVTGCV 339 (394)
Q Consensus 329 ~~~~~l~sg~~ 339 (394)
++++.|+.++.
T Consensus 281 ~d~~~L~vt~~ 291 (326)
T 2ghs_A 281 PDASRLLVTSA 291 (326)
T ss_dssp TTSCEEEEEEB
T ss_pred CCCCEEEEEec
Confidence 88777655543
No 228
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.47 E-value=1.1e-11 Score=122.96 Aligned_cols=238 Identities=9% Similarity=0.061 Sum_probs=156.1
Q ss_pred ccCCcEEEEEEcCCCCcEEE-----EecCCCeEEEEEcCCCeeeEeecCcccCE--EEEEEcCCCCEEEEEeCCCc----
Q 016187 62 GHSDEVYSVACSPTDATLVA-----TGGGDDKGFFWRINQGDWASEIQGHKDSV--SSLAFSMDGQLLASGGLDGL---- 130 (394)
Q Consensus 62 ~h~~~v~~~~~~p~~~~~la-----sg~~d~~v~~w~~~~~~~~~~~~~h~~~V--~~v~~s~~g~~l~t~s~d~~---- 130 (394)
+|...+..++|||++ ++|| +|+...++++||+.+++.+.. +...+ ..++|+ ||+.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVESKQPLET---PLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTTCSEEEE---EEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCCCCCCcc---ccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 456678899999965 4555 234447899999999986543 22223 578999 9999998887743
Q ss_pred ---------EEEEeCCCCce--EEEEec---CCCCEEEEEEcCCCCEEEEec----CCCeEEEEeCCccc-eeeeecccC
Q 016187 131 ---------VQIWDPSSGNL--KCTLEG---PGGGVEWVSWHPRGHIVLAGS----EDSTVWMWNADRAA-YLNMFSGHG 191 (394)
Q Consensus 131 ---------i~vwd~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~l~~~s----~d~~i~iw~~~~~~-~~~~~~~h~ 191 (394)
|++|++.++.. ...+.. +...+..+.|+|++++|+... ..+.++++++.++. ....+..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 99999887653 233332 234567899999999775433 23589999987653 334455555
Q ss_pred cCeEEEEECCCCCeEE-EEeCC---CcEEEEcCCCCce--EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC---cEEE
Q 016187 192 SSVTCGDFTPDGKTIC-TGSDD---ATLRVWNPKSGEN--IHVIRGHPYHTEGLTCLTISADSTLALSGSKDG---SVHM 262 (394)
Q Consensus 192 ~~v~~~~~~~~~~~l~-s~~~d---g~i~vwd~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg---~i~i 262 (394)
...... ++++|..|+ .+..+ +.|..+|+.++.. ...+..+ ...+. .+++++..|+....++ .|++
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~---~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE---RQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC---CSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC---CCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 544443 666666554 44333 6799999987653 2333332 22233 7888888777665443 6899
Q ss_pred EECCCCcEEEEec-cCCCCEEEEEECCCCCeEEEEeCC----CcEEEEeCCCCC
Q 016187 263 VNITTGKVVSSLV-SHTDSIECIGFSRSSPWAATGSMD----QKLIIWDLQHSL 311 (394)
Q Consensus 263 ~d~~~~~~~~~~~-~h~~~i~~v~~~~~~~~l~s~s~d----g~i~iwd~~~~~ 311 (394)
|++..+. ...+. .....+..+.+++++..++....+ +++..||+.+..
T Consensus 355 ~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 355 FDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp ECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 9987543 44443 344567777888888766655444 789999986653
No 229
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.42 E-value=1.3e-10 Score=114.31 Aligned_cols=299 Identities=14% Similarity=0.194 Sum_probs=186.0
Q ss_pred EEEecCCCeEEEEEcCCCeeeEeecCccc----------CE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC
Q 016187 80 VATGGGDDKGFFWRINQGDWASEIQGHKD----------SV-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGP 148 (394)
Q Consensus 80 lasg~~d~~v~~w~~~~~~~~~~~~~h~~----------~V-~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~ 148 (394)
+..++.++.++-+|..+++.+-.+..... .+ ..+++ .+..++.++.|+.|..+|..+|+.+-.+...
T Consensus 69 vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~ 146 (668)
T 1kv9_A 69 IYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQTT 146 (668)
T ss_dssp EEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred EEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeeccC
Confidence 33445678888889888887655532211 01 11222 3567888889999999999999988766542
Q ss_pred CCC-EEEEEEcC--CCCEEEEecC------CCeEEEEeCCccceeeeeccc-----------------------------
Q 016187 149 GGG-VEWVSWHP--RGHIVLAGSE------DSTVWMWNADRAAYLNMFSGH----------------------------- 190 (394)
Q Consensus 149 ~~~-v~~~~~~~--~~~~l~~~s~------d~~i~iw~~~~~~~~~~~~~h----------------------------- 190 (394)
... ...+.-.| .+..++.+.. ++.|+.+|..+++.+-.+...
T Consensus 147 ~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~ 226 (668)
T 1kv9_A 147 DPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLG 226 (668)
T ss_dssp CTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHC
T ss_pred CCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeC
Confidence 110 00000011 1334444433 589999999988876544310
Q ss_pred --CcCeEEEEECCCCCeEEEEeCCC-------------------cEEEEcCCCCceEEEEcCCC--Cc----ccCeEEEE
Q 016187 191 --GSSVTCGDFTPDGKTICTGSDDA-------------------TLRVWNPKSGENIHVIRGHP--YH----TEGLTCLT 243 (394)
Q Consensus 191 --~~~v~~~~~~~~~~~l~s~~~dg-------------------~i~vwd~~~~~~~~~~~~~~--~~----~~~i~~~~ 243 (394)
.......++.|+..+++.++.++ .|..+|..+|+.+-.+...+ .. ..+.....
T Consensus 227 ~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d 306 (668)
T 1kv9_A 227 GGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAE 306 (668)
T ss_dssp EECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEE
T ss_pred CCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEE
Confidence 11112357888888888888776 39999999999876665321 10 12233333
Q ss_pred EcCCCC---EEEEEeCCCcEEEEECCCCcEEEEeccCC------------CCE------------------------EEE
Q 016187 244 ISADST---LALSGSKDGSVHMVNITTGKVVSSLVSHT------------DSI------------------------ECI 284 (394)
Q Consensus 244 ~~~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~h~------------~~i------------------------~~v 284 (394)
+..+++ .++.++.+|.++++|..+|+++....... .++ ..+
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~ 386 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSM 386 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCC
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcc
Confidence 334665 68889999999999999999885432211 000 015
Q ss_pred EECCCCCeEEEE------------------------------------eCCCcEEEEeCCCCCcceeccCCCCEEEEEEe
Q 016187 285 GFSRSSPWAATG------------------------------------SMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWL 328 (394)
Q Consensus 285 ~~~~~~~~l~s~------------------------------------s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~ 328 (394)
+++|+..++... ..+|.|..||+.+...................
T Consensus 387 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~ 466 (668)
T 1kv9_A 387 SFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLS 466 (668)
T ss_dssp EEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEE
T ss_pred eECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeE
Confidence 667765554431 13478999999887665544433333333344
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCce-eEEEEccCCC-EEEEEe
Q 016187 329 GTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAI-QAISVSAHQD-FLVSVS 380 (394)
Q Consensus 329 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~-~l~s~s 380 (394)
..+.+|+.|+.||.+++||..+|+.+.++....+.. .-+.+..+++ |++.++
T Consensus 467 t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 467 TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred eCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 567899999999999999999999999887543222 2344555666 455443
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.40 E-value=1e-10 Score=115.42 Aligned_cols=271 Identities=13% Similarity=0.116 Sum_probs=178.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCCC----------E-EEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee
Q 016187 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG----------V-EWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (394)
Q Consensus 119 g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~ 187 (394)
+..++.++.++.|..+|..+|+.+-.+...... + ..+.. .+..++.++.|+.++.+|..+++.+-.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 567777888899999999999988776533210 0 01111 3457888889999999999998876544
Q ss_pred ccc--CcCeEEEEECC---CCCeEEEEe------CCCcEEEEcCCCCceEEEEcCCCCc---------------------
Q 016187 188 SGH--GSSVTCGDFTP---DGKTICTGS------DDATLRVWNPKSGENIHVIRGHPYH--------------------- 235 (394)
Q Consensus 188 ~~h--~~~v~~~~~~~---~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~--------------------- 235 (394)
... ......+..+| ++ .++.++ .+|.|+.||..+|+.+-.+...+..
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 331 11001111122 44 444443 3789999999999987665421100
Q ss_pred -------ccCeEEEEEcCCCCEEEEEeCCCc-------------------EEEEECCCCcEEEEecc--CC-------CC
Q 016187 236 -------TEGLTCLTISADSTLALSGSKDGS-------------------VHMVNITTGKVVSSLVS--HT-------DS 280 (394)
Q Consensus 236 -------~~~i~~~~~~~~~~~l~~g~~dg~-------------------i~i~d~~~~~~~~~~~~--h~-------~~ 280 (394)
......++++|+..+++.+..++. |..+|..+|+.+-.++. |. .+
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence 001124678898899999888764 99999999998866543 21 12
Q ss_pred EEEEEECCCCC---eEEEEeCCCcEEEEeCCCCCcceeccC-----------------------------CC--------
Q 016187 281 IECIGFSRSSP---WAATGSMDQKLIIWDLQHSLPRSTCDH-----------------------------ED-------- 320 (394)
Q Consensus 281 i~~v~~~~~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~-----------------------------~~-------- 320 (394)
+.......++. .++.++.+|.+.++|..+......... ..
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~ 386 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFW 386 (689)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTT
T ss_pred cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcc
Confidence 22222222443 788899999999999877654311000 00
Q ss_pred ---CEEEEEEeCCCCEEEEEeC---------------------------------------------CCeEEEEECCCCe
Q 016187 321 ---GVTCLMWLGTSKYVVTGCV---------------------------------------------DGKVRVWDSLSGD 352 (394)
Q Consensus 321 ---~v~~~~~~~~~~~l~sg~~---------------------------------------------dg~i~iwd~~~~~ 352 (394)
....++++|+..++++... +|.|+.||+.+++
T Consensus 387 Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~ 466 (689)
T 1yiq_A 387 GAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ 466 (689)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE
T ss_pred cccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC
Confidence 0112678888877776532 3789999999999
Q ss_pred EEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 353 CVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 353 ~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
.+-++..+. ++..-.+...+.+++.++.||.++.||.++-
T Consensus 467 ~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 467 AAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp EEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred eEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 988877544 3444456667889999999999999998764
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=1.8e-13 Score=125.17 Aligned_cols=256 Identities=11% Similarity=0.050 Sum_probs=137.6
Q ss_pred CcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCC-EEE-
Q 016187 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-VEW- 154 (394)
Q Consensus 77 ~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~-v~~- 154 (394)
+.++++++.|+.++.||..+++.+-.+.. +.+.+..+..++..+++++.|+.|+.||..+|+.+..+..+... +..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 34677888999999999999998877775 56666667778888888889999999999998876555432110 000
Q ss_pred EEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCC
Q 016187 155 VSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPY 234 (394)
Q Consensus 155 ~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 234 (394)
..+ ..+..+++++.++.++.||..+++.+..+..+.. ..++|++..+++++.|+.|+.||.++++.+..+....
T Consensus 87 p~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 87 PCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred ceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 001 1345677888899999999999987766655432 3456788899999999999999999988654433111
Q ss_pred cccCeEEEEEcCCC---CEEEEEeCCCcEEEEECCCCcEEEEeccCCCCE-EEEEECCCCCeE----EEEeCCCcEEEEe
Q 016187 235 HTEGLTCLTISADS---TLALSGSKDGSVHMVNITTGKVVSSLVSHTDSI-ECIGFSRSSPWA----ATGSMDQKLIIWD 306 (394)
Q Consensus 235 ~~~~i~~~~~~~~~---~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i-~~v~~~~~~~~l----~s~s~dg~i~iwd 306 (394)
.....+.++. ..+++++.+|.|..||..+|+.+-+.... .++ ....+++++... +.+ ++.+..+|
T Consensus 161 ----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~-~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld 233 (369)
T 2hz6_A 161 ----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA-SPVVAFYVWQREGLRKVMHINVA--VETLRYLT 233 (369)
T ss_dssp ----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS-SCEEEEEECTTSSCEEECCEEEE--HHHHHHHH
T ss_pred ----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC-CceEEEEEecCCceEeccceeec--ccceeeee
Confidence 1112233322 45677889999999999999987666533 344 334455555321 111 23344444
Q ss_pred CCCCC----cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Q 016187 307 LQHSL----PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 307 ~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~ 349 (394)
..+.. ..........+.. -.-.+..|+.++.+|.++.++..
T Consensus 234 ~~tG~~~~~~~W~~~~~~~~~s--p~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 234 FMSGEVGRITKWKYPFPKETEA--KSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHTSCCCCCCHHHH--HHHSEEEECBEECSSCEECCEEE
T ss_pred hhcCCcccceeeeeccCccccc--cccccceEEEecccCCEEecCcc
Confidence 32221 1111111111100 00123567778888888888764
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.37 E-value=3.8e-09 Score=96.55 Aligned_cols=265 Identities=14% Similarity=0.096 Sum_probs=169.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCC---------CCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecc
Q 016187 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPG---------GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG 189 (394)
Q Consensus 119 g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~ 189 (394)
+..++.++.++.|..+|..+|+.+....... ..+.. .....+..++.++.++.+..+|..+++.+-....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5678888889999999999999876655421 22322 2222456777888899999999998887654443
Q ss_pred cCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcc--cCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 016187 190 HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHT--EGLTCLTISADSTLALSGSKDGSVHMVNITT 267 (394)
Q Consensus 190 h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~ 267 (394)
.......... .+..++.++.++.|..+|..+++.+.......... ......... +..++++..++.|..+|..+
T Consensus 132 ~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 132 AGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp SSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTT
T ss_pred CCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCC
Confidence 3221111111 24578888899999999999998776654321100 000111122 45677788899999999999
Q ss_pred CcEEEEeccCCCC----EEE---EEECC--CCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEe
Q 016187 268 GKVVSSLVSHTDS----IEC---IGFSR--SSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGC 338 (394)
Q Consensus 268 ~~~~~~~~~h~~~----i~~---v~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 338 (394)
++.+-........ +.. +...| .+..+..++.++.+..+|..+......... .....+.. ++..|..++
T Consensus 208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~--~~~~l~~~~ 284 (376)
T 3q7m_A 208 GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL-GSVNDFIV--DGNRIYLVD 284 (376)
T ss_dssp CCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC-CCEEEEEE--ETTEEEEEE
T ss_pred CcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC-CCCCCceE--ECCEEEEEc
Confidence 9887655422110 000 00111 245677788899999999987655544332 22333333 356788888
Q ss_pred CCCeEEEEECCCCeEEEEeec-ccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 339 VDGKVRVWDSLSGDCVRTFSG-HRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 339 ~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
.+|.|..+|..+++.+..... ....+..... .+..|+.++.+|.+..+|..+-
T Consensus 285 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 285 QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp TTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTC
T ss_pred CCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCC
Confidence 999999999999998877652 2222333333 2467888888999999987653
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.36 E-value=8.8e-11 Score=115.66 Aligned_cols=271 Identities=12% Similarity=0.092 Sum_probs=182.2
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCCC-----------EEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee
Q 016187 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-----------VEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (394)
Q Consensus 119 g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~ 187 (394)
+..|+.++.++.|.-+|..+|+.+-.+...... ...+++ .+..++.++.|+.+..+|..+++.+-.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 557777788899999999999988776543210 011222 3567888899999999999999877655
Q ss_pred ccc-C----cCeEEEEECCCCCeEEEEeC------CCcEEEEcCCCCceEEEEcCCCCcc--------------------
Q 016187 188 SGH-G----SSVTCGDFTPDGKTICTGSD------DATLRVWNPKSGENIHVIRGHPYHT-------------------- 236 (394)
Q Consensus 188 ~~h-~----~~v~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~~-------------------- 236 (394)
..+ . ..+...-.. .+..++.++. ++.|+.+|..+|+.+..+.......
T Consensus 155 ~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 543 1 111110001 2345555543 7999999999999876665322110
Q ss_pred ---------cCeEEEEEcCCCCEEEEEeCCC-------------------cEEEEECCCCcEEEEecc--CC-------C
Q 016187 237 ---------EGLTCLTISADSTLALSGSKDG-------------------SVHMVNITTGKVVSSLVS--HT-------D 279 (394)
Q Consensus 237 ---------~~i~~~~~~~~~~~l~~g~~dg-------------------~i~i~d~~~~~~~~~~~~--h~-------~ 279 (394)
.....++++|++..++.+..++ +|..+|..+|+.+-.++. |. .
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 313 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCC
Confidence 0112467889888888887664 599999999998766543 21 1
Q ss_pred CEEEEEECCCC---CeEEEEeCCCcEEEEeCCCCCcceeccCC-----------CC------------------------
Q 016187 280 SIECIGFSRSS---PWAATGSMDQKLIIWDLQHSLPRSTCDHE-----------DG------------------------ 321 (394)
Q Consensus 280 ~i~~v~~~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~-----------~~------------------------ 321 (394)
....+....++ ..++.++.+|.+.++|..+.......... ..
T Consensus 314 ~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~ 393 (677)
T 1kb0_A 314 PMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH 393 (677)
T ss_dssp CCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS
T ss_pred CcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc
Confidence 12222333356 67889999999999998776543221100 00
Q ss_pred -EEEEEEeCCCCEEEEEeC-------------------------------------------CCeEEEEECCCCeEEEEe
Q 016187 322 -VTCLMWLGTSKYVVTGCV-------------------------------------------DGKVRVWDSLSGDCVRTF 357 (394)
Q Consensus 322 -v~~~~~~~~~~~l~sg~~-------------------------------------------dg~i~iwd~~~~~~~~~~ 357 (394)
...++++|+..++++... .|.|..||+.+++.+-++
T Consensus 394 ~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~ 473 (677)
T 1kb0_A 394 NWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV 473 (677)
T ss_dssp CSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE
T ss_pred CCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec
Confidence 014678888888877543 278999999999998877
Q ss_pred ecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 358 SGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 358 ~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
.. ..+++...+..++.+++.++.||.+++||..+-
T Consensus 474 ~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 474 EH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp EE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 63 445566667778889999999999999998764
No 234
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.35 E-value=3.8e-13 Score=122.97 Aligned_cols=257 Identities=14% Similarity=0.083 Sum_probs=136.9
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCc-CeEE
Q 016187 118 DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGS-SVTC 196 (394)
Q Consensus 118 ~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~-~v~~ 196 (394)
++.++++++.|+.|+.||..+|+.+..+.. +.+.+..+.+++.++++++.|+.++.||..+++.+..+..+.. .+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 577899999999999999999999887765 4455555566777888889999999999988776555443311 1100
Q ss_pred EEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc
Q 016187 197 GDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS 276 (394)
Q Consensus 197 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~ 276 (394)
.-....+..+++++.++.|+.||..+|+.+..+..+. ...++|++..+++++.++.|+.||.++|+.+-++..
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-------ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC-----------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-------cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 0001134567888889999999999998766554321 134556888899999999999999999876544322
Q ss_pred CCCCEEEEEECCCC---CeEEEEeCCCcEEEEeCCCCCcceeccCCCCEEEE-EEeCCCCEE----EEEeCCCeEEEEEC
Q 016187 277 HTDSIECIGFSRSS---PWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVTCL-MWLGTSKYV----VTGCVDGKVRVWDS 348 (394)
Q Consensus 277 h~~~i~~v~~~~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~-~~~~~~~~l----~sg~~dg~i~iwd~ 348 (394)
+. .....+.++. ..++.++.+|.+..||..+...........++..+ .+++++... +.+ ++.++++|.
T Consensus 159 ~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld~ 234 (369)
T 2hz6_A 159 FD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVA--VETLRYLTF 234 (369)
T ss_dssp EE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEE--HHHHHHHHH
T ss_pred cc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeec--ccceeeeeh
Confidence 11 1222333332 45777889999999999877665554444454432 223343221 112 334555665
Q ss_pred CCCe----EEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEec
Q 016187 349 LSGD----CVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEI 390 (394)
Q Consensus 349 ~~~~----~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~ 390 (394)
.+|+ .+-++.. .+.+.. ..-.+..|+.++.||.+..++.
T Consensus 235 ~tG~~~~~~~W~~~~-~~~~~s--p~~~~g~lyv~~~~G~l~al~~ 277 (369)
T 2hz6_A 235 MSGEVGRITKWKYPF-PKETEA--KSKLTPTLYVGKYSTSLYASPS 277 (369)
T ss_dssp HHHHHHHHHTSCCCC-CCHHHH--HHHSEEEECBEECSSCEECCEE
T ss_pred hcCCcccceeeeecc-Cccccc--cccccceEEEecccCCEEecCc
Confidence 5555 3322221 011110 0012345566666776666553
No 235
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.33 E-value=2e-07 Score=93.79 Aligned_cols=314 Identities=11% Similarity=0.139 Sum_probs=202.1
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecC-------cccCEEEEEEcCCCCEEEEEeCCCcEEEEeC
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-------HKDSVSSLAFSMDGQLLASGGLDGLVQIWDP 136 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~-------h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~ 136 (394)
...|.++...+. +.+.+. ..++.+..|+..++++...... ....|.++...++|.+.+ |+.+ -|.+|+.
T Consensus 214 ~~~i~~i~~d~~-g~lwig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~ 289 (795)
T 4a2l_A 214 TKQIQAILQQSP-TRIWVA-TEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHE 289 (795)
T ss_dssp CCCEEEEEEEET-TEEEEE-EBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEET
T ss_pred CCeeEEEEEcCC-CCEEEE-ECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcC
Confidence 356777777664 444443 3334478899877665443221 235699999999998665 4445 5889998
Q ss_pred CCCceEEEEec-------CCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeec------ccCcCeEEEEECCCC
Q 016187 137 SSGNLKCTLEG-------PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS------GHGSSVTCGDFTPDG 203 (394)
Q Consensus 137 ~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~------~h~~~v~~~~~~~~~ 203 (394)
.+++....... ....|.++...+++.+. .|+.++-|..|+..+........ .....|.++...++|
T Consensus 290 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g 368 (795)
T 4a2l_A 290 GTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK 368 (795)
T ss_dssp TTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS
T ss_pred CCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC
Confidence 87765433211 23568999888888754 56677778888876554322111 123468888888777
Q ss_pred CeEEEEeCCCcEEEEcCCCCceEEEEcCC-----CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec---
Q 016187 204 KTICTGSDDATLRVWNPKSGENIHVIRGH-----PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV--- 275 (394)
Q Consensus 204 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~--- 275 (394)
+ |..|+.++-|..|+..+++........ ......|.++...+++.++..|+.++-|..+|..+++...-..
T Consensus 369 ~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~ 447 (795)
T 4a2l_A 369 N-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNS 447 (795)
T ss_dssp C-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTS
T ss_pred C-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCC
Confidence 5 556777777999998776533221111 1223568899988888856677777789999998876443221
Q ss_pred -cCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-------cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Q 016187 276 -SHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-------DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWD 347 (394)
Q Consensus 276 -~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd 347 (394)
.....|.++...+++.+.+... +-+.+|+..+....... .....|.++...+++.+.+... +-|..|+
T Consensus 448 ~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~ 523 (795)
T 4a2l_A 448 QLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFK 523 (795)
T ss_dssp CCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEE
T ss_pred CcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEe
Confidence 1345799999998887655443 45888987654322211 1235688898888887666544 4588888
Q ss_pred CCCCeEEEEee-------cccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 348 SLSGDCVRTFS-------GHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 348 ~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
..+++. .+. .....|.++...+++.+.++.. .| +..|+..
T Consensus 524 ~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~G-l~~~d~~ 570 (795)
T 4a2l_A 524 QEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-EG-FYCFNEK 570 (795)
T ss_dssp EETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-SC-EEEEETT
T ss_pred CCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-CC-ceeECCC
Confidence 877765 332 2345689999988888766544 34 5666643
No 236
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.30 E-value=1.4e-07 Score=94.90 Aligned_cols=313 Identities=12% Similarity=0.162 Sum_probs=200.6
Q ss_pred EEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEee-cCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEE
Q 016187 67 VYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI-QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (394)
Q Consensus 67 v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~-~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~ 145 (394)
|.++...++ +.+.+ |..++.+..|+..++++.... ..+...|.++...++|.+.+ |+.++-|.+||..+++.....
T Consensus 175 i~~i~~d~~-g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 175 IASTLYRQG-DQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYL 251 (795)
T ss_dssp CEEEEEEET-TEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEEC
T ss_pred eEEEEECCC-CCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEee
Confidence 777777664 44444 344445788888776654432 12356799999888887655 444444899998876654322
Q ss_pred ec-------CCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeec-------ccCcCeEEEEECCCCCeEEEEeC
Q 016187 146 EG-------PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-------GHGSSVTCGDFTPDGKTICTGSD 211 (394)
Q Consensus 146 ~~-------~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~~ 211 (394)
.. ....|.++...+++.+.+.. .. -+.+|+..+........ .....|.++...++|. |..|+.
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~ 328 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTY 328 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEES
T ss_pred cCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEEC
Confidence 21 13568899888888765544 44 68889987665433211 1235688888888876 566777
Q ss_pred CCcEEEEcCCCCceEEEEcC----CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc--------CCC
Q 016187 212 DATLRVWNPKSGENIHVIRG----HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS--------HTD 279 (394)
Q Consensus 212 dg~i~vwd~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--------h~~ 279 (394)
++-|..|+..++.- ..+.. .......|.++...+++.+. .|+.++-|..|+..+++...-... ...
T Consensus 329 ~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 406 (795)
T 4a2l_A 329 FGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSN 406 (795)
T ss_dssp SSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCS
T ss_pred CCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCc
Confidence 77788998765432 22221 11223468899988888755 477777899999887764332211 235
Q ss_pred CEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-----cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE
Q 016187 280 SIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-----DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV 354 (394)
Q Consensus 280 ~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 354 (394)
.|.++...+++.+|..|+.++-|.+||..+....... .....|.++...+++.+.+.. .+ -|.+|+..+++..
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFT 484 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEE
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEE
Confidence 7899998888874556677777999998765433221 124568888888877765544 44 5888998877654
Q ss_pred EEeec------ccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 355 RTFSG------HRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 355 ~~~~~------h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
..... ....|.++...+++++.+... .| +..|+..
T Consensus 485 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~~ 525 (795)
T 4a2l_A 485 TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQE 525 (795)
T ss_dssp ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEEE
T ss_pred EccccccccccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeCC
Confidence 32211 235789999998888766554 44 6667653
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.29 E-value=1.5e-09 Score=99.01 Aligned_cols=223 Identities=12% Similarity=0.087 Sum_probs=153.3
Q ss_pred CCCCcEEEEecCCCeEEEEEcCCC----eeeEeec------C-cccCEEEEEEcCCCCEEEEEeCC------CcEEEEeC
Q 016187 74 PTDATLVATGGGDDKGFFWRINQG----DWASEIQ------G-HKDSVSSLAFSMDGQLLASGGLD------GLVQIWDP 136 (394)
Q Consensus 74 p~~~~~lasg~~d~~v~~w~~~~~----~~~~~~~------~-h~~~V~~v~~s~~g~~l~t~s~d------~~i~vwd~ 136 (394)
++..+++++|..+.+|.+.|+.+. +...+++ . -...-..+..+|+| +++++..+ +.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 667788999999999999998755 5555552 0 11234567889999 77777666 78999999
Q ss_pred CCCceEEEEecCCC---CEEEEEEcCCCCEEEEec-------------------CCCeEEEEeCCccceeeeeccc--Cc
Q 016187 137 SSGNLKCTLEGPGG---GVEWVSWHPRGHIVLAGS-------------------EDSTVWMWNADRAAYLNMFSGH--GS 192 (394)
Q Consensus 137 ~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~s-------------------~d~~i~iw~~~~~~~~~~~~~h--~~ 192 (394)
.+++.+.++....+ --..+.|+|+++.+++.. ...+|.+||+.+++.++.+... ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999888863222 233477899999888874 3689999999988777666542 12
Q ss_pred CeEEEEE--CCCCCeEEEEe------CCCcEEEEcCCCCce--EEEE--cCCC----C---c------ccCeEEEEEcCC
Q 016187 193 SVTCGDF--TPDGKTICTGS------DDATLRVWNPKSGEN--IHVI--RGHP----Y---H------TEGLTCLTISAD 247 (394)
Q Consensus 193 ~v~~~~~--~~~~~~l~s~~------~dg~i~vwd~~~~~~--~~~~--~~~~----~---~------~~~i~~~~~~~~ 247 (394)
....+.| +|+++++..++ .+++|.+|....++- ...+ ...+ . . ......+.+++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3445555 99999887766 566887766544321 1111 1100 0 0 134667889999
Q ss_pred CCEEEEEeC-CCcEEEEECC---CCcEEEEeccCC--------------CCEEEEEECCCCCeEEEEe
Q 016187 248 STLALSGSK-DGSVHMVNIT---TGKVVSSLVSHT--------------DSIECIGFSRSSPWAATGS 297 (394)
Q Consensus 248 ~~~l~~g~~-dg~i~i~d~~---~~~~~~~~~~h~--------------~~i~~v~~~~~~~~l~s~s 297 (394)
+++|+++.. .+.|.++|+. +.+.+..+.... .....+.++|++++|+++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 998887764 6799999985 235555543320 1357789999999888775
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.28 E-value=9.3e-09 Score=93.82 Aligned_cols=221 Identities=11% Similarity=0.050 Sum_probs=146.6
Q ss_pred CCCCEE-EEecCCCeEEEEeCCcc----ceeeeec------ccC-cCeEEEEECCCCCeEEEEeCC------CcEEEEcC
Q 016187 159 PRGHIV-LAGSEDSTVWMWNADRA----AYLNMFS------GHG-SSVTCGDFTPDGKTICTGSDD------ATLRVWNP 220 (394)
Q Consensus 159 ~~~~~l-~~~s~d~~i~iw~~~~~----~~~~~~~------~h~-~~v~~~~~~~~~~~l~s~~~d------g~i~vwd~ 220 (394)
++.++| +.+-.++.|+++|+.+. +..+.+. ... .....+...|+| .++++..+ +.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 666655 56667899999998644 4444442 111 234567789999 77776655 78999999
Q ss_pred CCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe-------------------CCCcEEEEECCCCcEEEEeccCC--C
Q 016187 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-------------------KDGSVHMVNITTGKVVSSLVSHT--D 279 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-------------------~dg~i~i~d~~~~~~~~~~~~h~--~ 279 (394)
.+++.+..+........--..+.++|+++.+++.. .+.+|.+||+.+++.+.++.... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99998887753211111122467899999888874 37899999999998888876531 2
Q ss_pred CEEEEEE--CCCCCeEEEEe------CCCcEEEEeCCCC-------------Ccceec--------cCCCCEEEEEEeCC
Q 016187 280 SIECIGF--SRSSPWAATGS------MDQKLIIWDLQHS-------------LPRSTC--------DHEDGVTCLMWLGT 330 (394)
Q Consensus 280 ~i~~v~~--~~~~~~l~s~s------~dg~i~iwd~~~~-------------~~~~~~--------~~~~~v~~~~~~~~ 330 (394)
....+.| +|+++++..++ .+++|.+|..... ...... .-......+.++++
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3344555 99999877766 5667765443211 000000 00234667889999
Q ss_pred CCEEEEEeC-CCeEEEEECC---CCeEEEEeeccc----------C----ceeEEEEccCCCEEEEEe
Q 016187 331 SKYVVTGCV-DGKVRVWDSL---SGDCVRTFSGHR----------D----AIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 331 ~~~l~sg~~-dg~i~iwd~~---~~~~~~~~~~h~----------~----~v~~l~~~~~~~~l~s~s 380 (394)
+++|.++.. .+.|.+||+. +.+.+..+.-.. . .-..++++|||++|+.+.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999988875 6899999985 335555554221 1 237899999999998887
No 239
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.28 E-value=3.3e-09 Score=102.31 Aligned_cols=296 Identities=13% Similarity=0.108 Sum_probs=178.3
Q ss_pred CCcEEEEecC-CCeEEEEEc-CCCeeeEeecCccc----------CE-EEEEEcCCCCEEEEEeCCCcEEEEeCCCCceE
Q 016187 76 DATLVATGGG-DDKGFFWRI-NQGDWASEIQGHKD----------SV-SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLK 142 (394)
Q Consensus 76 ~~~~lasg~~-d~~v~~w~~-~~~~~~~~~~~h~~----------~V-~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~ 142 (394)
++.+++ ++. ++.++-.|. .+++.+-.+..... .+ ..+++ .+..++.++.|+.|..+|..+|+.+
T Consensus 62 ~g~vyv-~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 62 GDMMYV-HSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp TTEEEE-ECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEE-EeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 344443 344 677888888 77776644322110 00 11222 3567888889999999999999987
Q ss_pred EEEecCCC----CEEE-EEEcCCCCEEEEecC------CCeEEEEeCCccceeeeecccCc-------------------
Q 016187 143 CTLEGPGG----GVEW-VSWHPRGHIVLAGSE------DSTVWMWNADRAAYLNMFSGHGS------------------- 192 (394)
Q Consensus 143 ~~~~~~~~----~v~~-~~~~~~~~~l~~~s~------d~~i~iw~~~~~~~~~~~~~h~~------------------- 192 (394)
-....... .+.. ... .++ .++.++. ++.|+.+|..+++.+-.+.....
T Consensus 139 W~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 66543210 1110 001 134 4455544 78999999998876644322110
Q ss_pred -------------------CeEEEEECCCCCeEEEEeCC----------------CcEEEEcCCCCceEEEEcCCC----
Q 016187 193 -------------------SVTCGDFTPDGKTICTGSDD----------------ATLRVWNPKSGENIHVIRGHP---- 233 (394)
Q Consensus 193 -------------------~v~~~~~~~~~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~---- 233 (394)
....+++.+....++.+..+ +.|..+|..+++.+-.++..+
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 00124566666666665532 369999999999876654321
Q ss_pred ---CcccCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCcEEEEeccCC-------------CCE-------------
Q 016187 234 ---YHTEGLTCLTISADST---LALSGSKDGSVHMVNITTGKVVSSLVSHT-------------DSI------------- 281 (394)
Q Consensus 234 ---~~~~~i~~~~~~~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~h~-------------~~i------------- 281 (394)
....++ .+...++|+ .++.++.+|.+.++|..+|+.+-...... .++
T Consensus 297 d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 375 (571)
T 2ad6_A 297 DFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKG 375 (571)
T ss_dssp CCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCE
T ss_pred ccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCc
Confidence 111222 233334674 67788999999999999999876653221 111
Q ss_pred -------------EEEEECCCCCeEEEEe-------------------------------------CCCcEEEEeCCCCC
Q 016187 282 -------------ECIGFSRSSPWAATGS-------------------------------------MDQKLIIWDLQHSL 311 (394)
Q Consensus 282 -------------~~v~~~~~~~~l~s~s-------------------------------------~dg~i~iwd~~~~~ 311 (394)
..++++|+..+++... .+|.|..||+.+..
T Consensus 376 ~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~ 455 (571)
T 2ad6_A 376 TNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK 455 (571)
T ss_dssp EEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC
T ss_pred eEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC
Confidence 1356777766665543 35788899988776
Q ss_pred cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCc-eeEEEEccCCCEEE
Q 016187 312 PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDA-IQAISVSAHQDFLV 377 (394)
Q Consensus 312 ~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~l~ 377 (394)
..........+........+..++.++.||.|+.||..+|+.+.++...... -.-+.+..+++.++
T Consensus 456 ~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 456 AKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp EEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 6554443333322222334667888999999999999999999988743322 12344556776544
No 240
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.27 E-value=1.7e-08 Score=97.48 Aligned_cols=300 Identities=15% Similarity=0.157 Sum_probs=178.0
Q ss_pred CCcEEEEecCCCeEEEEEcCCCeeeEeecCcccC---------EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 016187 76 DATLVATGGGDDKGFFWRINQGDWASEIQGHKDS---------VSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE 146 (394)
Q Consensus 76 ~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~---------V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 146 (394)
++.+++++..+ .++-+|..+++.+-.+...... -..+++ .+..++.++.|+.|..+|..+|+.+-...
T Consensus 68 ~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVIYVTASYS-RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEEETTT-EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CCEEEEEcCCC-CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 34444443323 4777888888766554332211 012222 35677888899999999999999876654
Q ss_pred cCCC----CEE---EEEEc-CCCC-EEEEec------CCCeEEEEeCCccceeeeecccC--------------------
Q 016187 147 GPGG----GVE---WVSWH-PRGH-IVLAGS------EDSTVWMWNADRAAYLNMFSGHG-------------------- 191 (394)
Q Consensus 147 ~~~~----~v~---~~~~~-~~~~-~l~~~s------~d~~i~iw~~~~~~~~~~~~~h~-------------------- 191 (394)
.... .+. .+.=. .+++ .+++++ .++.|+.+|..+++.+-......
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 3220 010 01100 1122 555654 37899999998877553322110
Q ss_pred ---------------------cCeEEEEECCCCCeEEEEeC--------------------C----CcEEEEcCCCCceE
Q 016187 192 ---------------------SSVTCGDFTPDGKTICTGSD--------------------D----ATLRVWNPKSGENI 226 (394)
Q Consensus 192 ---------------------~~v~~~~~~~~~~~l~s~~~--------------------d----g~i~vwd~~~~~~~ 226 (394)
..-...++.|...+++.+.. | +.|.-+|..+|+.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 00012456676677766553 2 68999999999987
Q ss_pred EEEcCCCC-------cccCeEEEEEc-CCCC---EEEEEeCCCcEEEEECCCCcEEEEeccCC-------------CCE-
Q 016187 227 HVIRGHPY-------HTEGLTCLTIS-ADST---LALSGSKDGSVHMVNITTGKVVSSLVSHT-------------DSI- 281 (394)
Q Consensus 227 ~~~~~~~~-------~~~~i~~~~~~-~~~~---~l~~g~~dg~i~i~d~~~~~~~~~~~~h~-------------~~i- 281 (394)
-.++..+. ...++ .+... .+|+ .++.++.+|.++++|..+|+++-...... .++
T Consensus 305 W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 66543211 11122 22222 4663 78889999999999999999886654321 000
Q ss_pred -------------------------------EEEEECCCCCeEEEEe---------------------------------
Q 016187 282 -------------------------------ECIGFSRSSPWAATGS--------------------------------- 297 (394)
Q Consensus 282 -------------------------------~~v~~~~~~~~l~s~s--------------------------------- 297 (394)
..++++|+..+++...
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 1245666555554432
Q ss_pred CCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCce-eEEEEccCCC-E
Q 016187 298 MDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAI-QAISVSAHQD-F 375 (394)
Q Consensus 298 ~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~-~ 375 (394)
.+|.|..||+.+............+..-.....+.+++.|+.||.++.||.++|+.+.++....+.+ .-+.+..+++ |
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 2578889998877665443322222111112246788889999999999999999999887543322 2366777876 4
Q ss_pred EEEE
Q 016187 376 LVSV 379 (394)
Q Consensus 376 l~s~ 379 (394)
+++.
T Consensus 544 v~~~ 547 (582)
T 1flg_A 544 LGVT 547 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 241
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.27 E-value=6.7e-09 Score=100.20 Aligned_cols=294 Identities=14% Similarity=0.118 Sum_probs=176.6
Q ss_pred ecC-CCeEEEEEc-CCCeeeEeecCccc-----------CEEEEEEcCCCCE----EEEEeCCCcEEEEeCCCCceEEEE
Q 016187 83 GGG-DDKGFFWRI-NQGDWASEIQGHKD-----------SVSSLAFSMDGQL----LASGGLDGLVQIWDPSSGNLKCTL 145 (394)
Q Consensus 83 g~~-d~~v~~w~~-~~~~~~~~~~~h~~-----------~V~~v~~s~~g~~----l~t~s~d~~i~vwd~~~~~~~~~~ 145 (394)
++. ++.+.-.|. .+++.+-.+.-... ....++++|.+.. ++.++.|+.|..+|..+|+.+-..
T Consensus 68 ~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~ 147 (599)
T 1w6s_A 68 HTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKV 147 (599)
T ss_dssp ECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEee
Confidence 444 677777888 77776544432111 1123556544444 788889999999999999987665
Q ss_pred ecCCC----CEEE-EEEcCCCCEEEEec------CCCeEEEEeCCccceeeeecccCcC---------------------
Q 016187 146 EGPGG----GVEW-VSWHPRGHIVLAGS------EDSTVWMWNADRAAYLNMFSGHGSS--------------------- 193 (394)
Q Consensus 146 ~~~~~----~v~~-~~~~~~~~~l~~~s------~d~~i~iw~~~~~~~~~~~~~h~~~--------------------- 193 (394)
..... .+.. ... .++ .+++++ .++.|+.+|..+++.+-.+......
T Consensus 148 ~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~ 225 (599)
T 1w6s_A 148 ENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGL 225 (599)
T ss_dssp ECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTH
T ss_pred cCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccccccccc
Confidence 43210 1111 011 134 455554 3799999999988765433221100
Q ss_pred ----------------e-EEEEECCCCCeEEEEeCC----------------CcEEEEcCCCCceEEEEcCCCC------
Q 016187 194 ----------------V-TCGDFTPDGKTICTGSDD----------------ATLRVWNPKSGENIHVIRGHPY------ 234 (394)
Q Consensus 194 ----------------v-~~~~~~~~~~~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~~------ 234 (394)
+ ...++.+...+++.+..+ ++|.-+|..+|+.+-.+...+.
T Consensus 226 g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d 305 (599)
T 1w6s_A 226 GTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYA 305 (599)
T ss_dssp HHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCC
T ss_pred ccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCcccccc
Confidence 0 123556677777777655 3799999999998766553221
Q ss_pred -cccCeEEEEEc-CCC---CEEEEEeCCCcEEEEECCCCcEEEEeccCC-------------CCE---------------
Q 016187 235 -HTEGLTCLTIS-ADS---TLALSGSKDGSVHMVNITTGKVVSSLVSHT-------------DSI--------------- 281 (394)
Q Consensus 235 -~~~~i~~~~~~-~~~---~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~-------------~~i--------------- 281 (394)
...++ .+... .+| ..++.++.+|.+.++|..+|+++-...... .++
T Consensus 306 ~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 384 (599)
T 1w6s_A 306 GVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKD 384 (599)
T ss_dssp CCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEE
T ss_pred CCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccE
Confidence 11122 22332 567 567778999999999999999876543211 111
Q ss_pred -----------EEEEECCCCCeEEEEe---------------------------------------CCCcEEEEeCCCCC
Q 016187 282 -----------ECIGFSRSSPWAATGS---------------------------------------MDQKLIIWDLQHSL 311 (394)
Q Consensus 282 -----------~~v~~~~~~~~l~s~s---------------------------------------~dg~i~iwd~~~~~ 311 (394)
..++++|+..++++.. ..|.|..||+.+..
T Consensus 385 ~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~ 464 (599)
T 1w6s_A 385 ICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGD 464 (599)
T ss_dssp ESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCC
T ss_pred eccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCC
Confidence 1345666555544321 34678888887776
Q ss_pred cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeecccCce-eEEEEccCCC-EEEEE
Q 016187 312 PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHRDAI-QAISVSAHQD-FLVSV 379 (394)
Q Consensus 312 ~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~~-~l~s~ 379 (394)
......+..+...-.....+..|+.|+.||.++.||.++|+.+-++.-..+.+ .-+.+..+|+ |+++.
T Consensus 465 ~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 465 YKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY 534 (599)
T ss_dssp EEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred EEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEEE
Confidence 55544322222111122356788889999999999999999998886433222 3355667776 44443
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.27 E-value=1e-10 Score=104.85 Aligned_cols=258 Identities=14% Similarity=0.091 Sum_probs=161.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccC
Q 016187 112 SLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG 191 (394)
Q Consensus 112 ~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~ 191 (394)
++.+..+|. |..++.++.|..|| .+++.......+...+..+...+++. +..++.+ +..+|. +++.+..+....
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~ 97 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKK 97 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC--
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCC
Confidence 345556665 55567788899999 88887654443333445566666665 4445554 888886 444433333222
Q ss_pred cCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Q 016187 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVV 271 (394)
Q Consensus 192 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~ 271 (394)
.......+. +..|..++.++.|..+|.. ++........ ...+.++...+++. ++.++.++.|..+|.. ++.+
T Consensus 98 ~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~---~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~ 169 (330)
T 3hxj_A 98 AIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTK---KAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEK 169 (330)
T ss_dssp ---CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECS---SCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEE
T ss_pred CcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCC---CceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEe
Confidence 222222333 5667888889999999988 6655444322 22344556666776 5567788999999998 8777
Q ss_pred EEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Q 016187 272 SSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC-DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS 350 (394)
Q Consensus 272 ~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~ 350 (394)
..+......+.++.+.+++.+.+. + +.|..+| .+....... .....+.++...+++ .|..++.++.|..++ .+
T Consensus 170 ~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~~gl~~~~-~~ 243 (330)
T 3hxj_A 170 WRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG-TIYVTSLDGHLYAIN-PD 243 (330)
T ss_dssp EEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS-CEEEEETTTEEEEEC-TT
T ss_pred EEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCC-eEEEEcCCCeEEEEC-CC
Confidence 666555566777778777775544 3 7888998 443322222 223446667777766 455677788899997 46
Q ss_pred CeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEec
Q 016187 351 GDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEI 390 (394)
Q Consensus 351 ~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~ 390 (394)
++.+..+......+..+.+.+++. |..++.+|.+..++.
T Consensus 244 g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 244 GTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp SCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred CCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 777766665555555666665554 555777877887774
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.26 E-value=2e-10 Score=108.35 Aligned_cols=280 Identities=14% Similarity=0.104 Sum_probs=184.2
Q ss_pred cEEEEecCCCeEEEEEcCCCeeeEeec-----------------------------------Cc----ccCEEEEEEcC-
Q 016187 78 TLVATGGGDDKGFFWRINQGDWASEIQ-----------------------------------GH----KDSVSSLAFSM- 117 (394)
Q Consensus 78 ~~lasg~~d~~v~~w~~~~~~~~~~~~-----------------------------------~h----~~~V~~v~~s~- 117 (394)
..|.|||..|.++++-+.+++.+..+. |- .+...-...|.
T Consensus 16 ~~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t 95 (595)
T 1fwx_A 16 YGFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFT 95 (595)
T ss_dssp EEEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEE
T ss_pred EEEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCC
Confidence 346788888888888877766544331 10 01112244444
Q ss_pred ----CCCEEEEEeC-CCcEEEEeCCCCceEEEEecC-CCCEEEEEE-c-CCCCEEEEec------------------CCC
Q 016187 118 ----DGQLLASGGL-DGLVQIWDPSSGNLKCTLEGP-GGGVEWVSW-H-PRGHIVLAGS------------------EDS 171 (394)
Q Consensus 118 ----~g~~l~t~s~-d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~s------------------~d~ 171 (394)
||++|+.... +..|.+-|+.+.+....+.-+ ......+++ . |++.++++++ .++
T Consensus 96 ~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 96 EGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp TTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 8888876655 556999999999987755543 245788888 4 8999888874 245
Q ss_pred eEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCc---------------EEEEcCCCCceEEEEcCCCCcc
Q 016187 172 TVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDAT---------------LRVWNPKSGENIHVIRGHPYHT 236 (394)
Q Consensus 172 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~---------------i~vwd~~~~~~~~~~~~~~~~~ 236 (394)
.+.+.|..+.+....+.--. ....++++|+|+++++.+.+.. |.+.|.....
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~------------ 242 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE------------ 242 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH------------
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee------------
Confidence 78899999887776655322 3456789999999998886642 2222211100
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCcEEEEECCC--CcE-EEEeccCCCCEEEEEECCCCCeEEEEe-CCCcEEEEeCCCCC-
Q 016187 237 EGLTCLTISADSTLALSGSKDGSVHMVNITT--GKV-VSSLVSHTDSIECIGFSRSSPWAATGS-MDQKLIIWDLQHSL- 311 (394)
Q Consensus 237 ~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~--~~~-~~~~~~h~~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~~~~- 311 (394)
.+.++|++... +.+.+.|.++ ++. +..+.. .....++.++||+++++.++ .+.+|.++|+.+..
T Consensus 243 ------~~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~ 311 (595)
T 1fwx_A 243 ------KAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDA 311 (595)
T ss_dssp ------HHHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHH
T ss_pred ------EeccCCCeeEE----CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccc
Confidence 01234444333 5599999998 554 444432 23567899999999876654 67899999987531
Q ss_pred -----------cceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC----------CeEEEEeecccCce-----e
Q 016187 312 -----------PRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS----------GDCVRTFSGHRDAI-----Q 365 (394)
Q Consensus 312 -----------~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~----------~~~~~~~~~h~~~v-----~ 365 (394)
......-......++|+++|...++.-.|+.|.+||+.+ .+.+.++..|-.+- .
T Consensus 312 ~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~ 391 (595)
T 1fwx_A 312 VFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVM 391 (595)
T ss_dssp HHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETT
T ss_pred ccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceecc
Confidence 111223345678899999994444566799999999876 56677777664432 2
Q ss_pred EEEEccCCCEEEEEeC
Q 016187 366 AISVSAHQDFLVSVSL 381 (394)
Q Consensus 366 ~l~~~~~~~~l~s~s~ 381 (394)
.+.++|||++|++...
T Consensus 392 g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 392 GETLDATNDWLVCLSK 407 (595)
T ss_dssp TTSTTCCSSEEEEEES
T ss_pred ceEeCCCCCEEEEcCC
Confidence 3356799999998753
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.25 E-value=3.9e-08 Score=85.26 Aligned_cols=249 Identities=10% Similarity=-0.003 Sum_probs=152.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCce-----EEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceeeeecccCcC
Q 016187 120 QLLASGGLDGLVQIWDPSSGNL-----KCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSS 193 (394)
Q Consensus 120 ~~l~t~s~d~~i~vwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~ 193 (394)
.+|+.+.. +.|+.+++..... ...+..+...+..++|++++. ++++-...+.|..++.........+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34544443 4688888765432 112222223467899999655 5556666789999998765443333323346
Q ss_pred eEEEEECCCCCeEE-EEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCc
Q 016187 194 VTCGDFTPDGKTIC-TGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK---DGSVHMVNITTGK 269 (394)
Q Consensus 194 v~~~~~~~~~~~l~-s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~---dg~i~i~d~~~~~ 269 (394)
...+++.|++..|+ +-...+.|.++++........... .......++++|++..++.+.. .+.|..+++....
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~---~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT---GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS---SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEEC---CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 78899999765554 555678899999864332222221 1235678999996555544443 4688888875432
Q ss_pred EEEEe-ccCCCCEEEEEECCCCCeEE-EEeCCCcEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Q 016187 270 VVSSL-VSHTDSIECIGFSRSSPWAA-TGSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWD 347 (394)
Q Consensus 270 ~~~~~-~~h~~~i~~v~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd 347 (394)
...+ ...-.....+++++++..|. +....++|..+++.................++.. .+..+++-...+.|..+|
T Consensus 158 -~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d 235 (267)
T 1npe_A 158 -RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMD 235 (267)
T ss_dssp -CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred -cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEe
Confidence 2222 12234678899999876654 4455678999998654322222222234556554 333444444568999999
Q ss_pred CCCCeEEEEeeccc-CceeEEEEccCCC
Q 016187 348 SLSGDCVRTFSGHR-DAIQAISVSAHQD 374 (394)
Q Consensus 348 ~~~~~~~~~~~~h~-~~v~~l~~~~~~~ 374 (394)
..+++.+..+.... .....+++.|++.
T Consensus 236 ~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 236 LAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCCCceEEEccccccccceeeecCccC
Confidence 99999998886433 2367888888764
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.22 E-value=6e-08 Score=84.09 Aligned_cols=221 Identities=11% Similarity=0.054 Sum_probs=143.7
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCceEE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKC 143 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~-t~s~d~~i~vwd~~~~~~~~ 143 (394)
.....++++|.++.++.+-...+.|..++.........+.........++++|++..|+ +-...+.|.+++........
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 35678999997777888877889999999876554433433335678999999766554 44567789999986543332
Q ss_pred EEecCCCCEEEEEEcCCCCEE-EEecC--CCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEE-EEeCCCcEEEEc
Q 016187 144 TLEGPGGGVEWVSWHPRGHIV-LAGSE--DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTIC-TGSDDATLRVWN 219 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l-~~~s~--d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd 219 (394)
...........++++|++..| ++... .+.|..++...................++++|+++.|. +-...+.|.++|
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 233222467889999965544 44433 46888888764332222222234578899999877664 555568899999
Q ss_pred CCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCC-CCEEEEEECCCC
Q 016187 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHT-DSIECIGFSRSS 290 (394)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~-~~i~~v~~~~~~ 290 (394)
+........+.. ......+++. .+.++++....+.|..+|..+++.+..+.... .....+++.|++
T Consensus 196 ~~g~~~~~~~~~----~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 196 PAQPGRRKVLEG----LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp TTEEEEEEEEEC----CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred cCCCceEEEecC----CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 875433333322 1223455554 45555666677899999999999888875433 235667777664
No 246
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.17 E-value=8.8e-07 Score=88.99 Aligned_cols=315 Identities=11% Similarity=0.093 Sum_probs=191.8
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecC-------cccCEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG-------HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~-------h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~ 137 (394)
..|.++...+.+ .+.+. ... -+.+|+..++++...... ....|.++...++|.+.+ |+..+-|.+++..
T Consensus 211 ~~i~~i~~d~~g-~lwig-t~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~ 286 (781)
T 3v9f_A 211 NDVRCIYKDTNG-NIWIG-TSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATELNGIMILDLQ 286 (781)
T ss_dssp SSEEEEEECTTC-CEEEE-ETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEE-EESSSCEEEEETT
T ss_pred CceeEEEEcCCC-CEEEE-eCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCCCCeEEECCC
Confidence 468888887754 44432 233 688899877665432211 245699999998886554 5554568889987
Q ss_pred CCceEEEEe--------------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee---------cccCcCe
Q 016187 138 SGNLKCTLE--------------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---------SGHGSSV 194 (394)
Q Consensus 138 ~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~---------~~h~~~v 194 (394)
++....... .....|.++...+++. |..|+.++-|..++.......... ......|
T Consensus 287 ~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 287 QNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp CC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 765432111 1235688888888776 445666777888887655432211 0123568
Q ss_pred EEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEe
Q 016187 195 TCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL 274 (394)
Q Consensus 195 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 274 (394)
.++...++|+ |..|+.++-|..||..+++..............|.++...+++.+.+ |+.++.|..++..+++...-.
T Consensus 366 ~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 366 SSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp EEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECC
T ss_pred EEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEec
Confidence 8888877765 55666666688898765432111110112335688888888877655 666677999998777543221
Q ss_pred c--cCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceecc------CCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Q 016187 275 V--SHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCD------HEDGVTCLMWLGTSKYVVTGCVDGKVRVW 346 (394)
Q Consensus 275 ~--~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~sg~~dg~i~iw 346 (394)
. .....|.++...+++.+.+. +. +-|..||..+........ ....|.++...+++.+.+ |+.++-|..|
T Consensus 444 ~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~ 520 (781)
T 3v9f_A 444 LEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIY 520 (781)
T ss_dssp STTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEE
T ss_pred cCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEE
Confidence 1 13467999998888775544 34 558888876543322211 135688888888887655 4443347778
Q ss_pred ECCCCeEEEEeec----ccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 347 DSLSGDCVRTFSG----HRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 347 d~~~~~~~~~~~~----h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
+..+++.. .+.. ....|.++...+++.+.++.. +|.|..|+..
T Consensus 521 ~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~ 567 (781)
T 3v9f_A 521 TPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSAR 567 (781)
T ss_dssp CTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTT
T ss_pred eCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCC
Confidence 87766543 3431 135688999888888766544 6654666644
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.16 E-value=3.6e-08 Score=84.51 Aligned_cols=206 Identities=13% Similarity=0.120 Sum_probs=143.4
Q ss_pred eeEeecCcc--cCEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCceEEEEecCCC-CEEEEEEcCCCCEEEEecCCCeE
Q 016187 99 WASEIQGHK--DSVSSLAFSMDGQLLASGGL--DGLVQIWDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGSEDSTV 173 (394)
Q Consensus 99 ~~~~~~~h~--~~V~~v~~s~~g~~l~t~s~--d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~s~d~~i 173 (394)
.+.+++ |. .....+.|+|+|.++++.+. ++.|++.|+.+++.+..+.-... ....+++.. +.++++.-.++.+
T Consensus 11 vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v 88 (266)
T 2iwa_A 11 VLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIG 88 (266)
T ss_dssp EEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEE
T ss_pred EEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEE
Confidence 344553 33 34679999998755555543 57999999999999887763332 233455542 3445555678999
Q ss_pred EEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCC--CcccCeEEEEEcCCCCEE
Q 016187 174 WMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP--YHTEGLTCLTISADSTLA 251 (394)
Q Consensus 174 ~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l 251 (394)
.++|..+.+.+..+...... ...++++|+.++.+..++.|.++|+.+.+.+..+.... .....++.+.+. ++.++
T Consensus 89 ~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ly 165 (266)
T 2iwa_A 89 FIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVW 165 (266)
T ss_dssp EEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEE
Confidence 99999998888777532111 23456788888777788999999999988777665321 111235667777 67666
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccC-------------CCCEEEEEECCCCC-eEEEEeCCCcEEEEeCCC
Q 016187 252 LSGSKDGSVHMVNITTGKVVSSLVSH-------------TDSIECIGFSRSSP-WAATGSMDQKLIIWDLQH 309 (394)
Q Consensus 252 ~~g~~dg~i~i~d~~~~~~~~~~~~h-------------~~~i~~v~~~~~~~-~l~s~s~dg~i~iwd~~~ 309 (394)
+....++.|.+.|+.+++++..+... ....+.++|+|++. +++++...+++...++..
T Consensus 166 vn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 166 ANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 66667889999999999998887531 13568999999976 566666788888887654
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.10 E-value=7.4e-08 Score=82.58 Aligned_cols=194 Identities=8% Similarity=-0.049 Sum_probs=133.3
Q ss_pred CeEEEEECCCCCeEEEEeC--CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Q 016187 193 SVTCGDFTPDGKTICTGSD--DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV 270 (394)
Q Consensus 193 ~v~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~ 270 (394)
....++|+|++.+.++.+. +++|++.|+.+++.+..+.... ......+++. .+.++++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD--SYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT--TCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC--CcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcE
Confidence 3578999998755555443 6799999999999887765321 1112234444 235555666789999999999999
Q ss_pred EEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceecc---C---CCCEEEEEEeCCCCEEEEEeCCCeEE
Q 016187 271 VSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCD---H---EDGVTCLMWLGTSKYVVTGCVDGKVR 344 (394)
Q Consensus 271 ~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~sg~~dg~i~ 344 (394)
+.++... .+ ....+++++..++.+..+++|.++|..+........ . -..++.+.|. ++...+....++.|.
T Consensus 99 ~~~i~~g-~~-~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 99 IKNFTHQ-MK-DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEEEECC-SS-SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEEECC-CC-CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 9888543 11 224466677777777778999999998765433321 1 1236677887 665444444678999
Q ss_pred EEECCCCeEEEEeeccc-------------CceeEEEEccCCC-EEEEEeCCCcEEEEeccC
Q 016187 345 VWDSLSGDCVRTFSGHR-------------DAIQAISVSAHQD-FLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 345 iwd~~~~~~~~~~~~h~-------------~~v~~l~~~~~~~-~l~s~s~dg~i~iw~~~~ 392 (394)
+.|..+++.+..+.-.. ...+.++|+|+++ +++++...+++...++..
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 99999999999886311 2458999999976 555666788888877653
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.09 E-value=4.3e-09 Score=99.32 Aligned_cols=221 Identities=13% Similarity=0.093 Sum_probs=154.3
Q ss_pred CCCcEEEEecCCCeEEEEEcCCCeeeEeecC-cccCEEEEEE-c-CCCCEEEEEe------------------CCCcEEE
Q 016187 75 TDATLVATGGGDDKGFFWRINQGDWASEIQG-HKDSVSSLAF-S-MDGQLLASGG------------------LDGLVQI 133 (394)
Q Consensus 75 ~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~-h~~~V~~v~~-s-~~g~~l~t~s------------------~d~~i~v 133 (394)
++..++++...+.+|.+-|+.+.+....+.- .......+++ + |++++++.++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 4567788888899999999999998874432 1245788888 5 9999998885 3457899
Q ss_pred EeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCC--------------------------------------eEEE
Q 016187 134 WDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDS--------------------------------------TVWM 175 (394)
Q Consensus 134 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~--------------------------------------~i~i 175 (394)
.|..+.+...++.-.. ....++.+|+++++++.+.+. .+.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998887766332 345678999999888777543 2455
Q ss_pred EeCCc--cce-eeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEEcCCCCceE---------EEEcCCCCcccCeEEE
Q 016187 176 WNADR--AAY-LNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNPKSGENI---------HVIRGHPYHTEGLTCL 242 (394)
Q Consensus 176 w~~~~--~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~~i~~~ 242 (394)
.|..+ ++. +..+.. .....++.++|||++++.+ ..+.+|.++|+.+.+.. .... ......+...+
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~v~vG~gP~h~ 336 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-EPELGLGPLHT 336 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-CCBCCSCEEEE
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-EcCCCCCcceE
Confidence 55554 222 223321 2234578999999987655 46789999999864310 0011 11123568889
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCC----------CcEEEEeccCCCCE-----EEEEECCCCCeEEEEeC
Q 016187 243 TISADSTLALSGSKDGSVHMVNITT----------GKVVSSLVSHTDSI-----ECIGFSRSSPWAATGSM 298 (394)
Q Consensus 243 ~~~~~~~~l~~g~~dg~i~i~d~~~----------~~~~~~~~~h~~~i-----~~v~~~~~~~~l~s~s~ 298 (394)
+|+|+|..+++.-.|+.|.+||+.+ .+.+.++..|-.+- ..+.++|+++||+++..
T Consensus 337 aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 337 AFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred EECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 9999996666778899999999977 56788887765542 12346899999998754
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.09 E-value=6.1e-08 Score=82.16 Aligned_cols=192 Identities=17% Similarity=0.188 Sum_probs=132.1
Q ss_pred eeEeecCcc--cCEEEEEEcCCCCEEEEEeCCC--cEEEEeCCCCceEEEEecCCCCE-EEEEEcCCCCEEEEecCCCeE
Q 016187 99 WASEIQGHK--DSVSSLAFSMDGQLLASGGLDG--LVQIWDPSSGNLKCTLEGPGGGV-EWVSWHPRGHIVLAGSEDSTV 173 (394)
Q Consensus 99 ~~~~~~~h~--~~V~~v~~s~~g~~l~t~s~d~--~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~s~d~~i 173 (394)
.+.+++ |. .....+.|+ ++.++.+.+.+| .|+++|+.+++.+..+....... ..++... ++++...-.++.+
T Consensus 33 vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~ltw~~~~v 109 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK-DKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEE
T ss_pred EEEEec-CCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC-CEEEEEEeeCCEE
Confidence 345554 33 345889998 677777777766 89999999999988876544322 2244432 2344445568999
Q ss_pred EEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCC--CcccCeEEEEEcCCCCEE
Q 016187 174 WMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHP--YHTEGLTCLTISADSTLA 251 (394)
Q Consensus 174 ~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l 251 (394)
.+||..+.+.+..+...... ..+.++++.|+.+..+..|.++|+.+.+.+..+.... .....++-+.+. +|.++
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ly 185 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIF 185 (262)
T ss_dssp EEEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEE
Confidence 99999999888877643321 2344677877777767889999999998877765321 111334556665 67666
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccC------------CCCEEEEEECCCCCeEEEEe
Q 016187 252 LSGSKDGSVHMVNITTGKVVSSLVSH------------TDSIECIGFSRSSPWAATGS 297 (394)
Q Consensus 252 ~~g~~dg~i~i~d~~~~~~~~~~~~h------------~~~i~~v~~~~~~~~l~s~s 297 (394)
+..-.+..|.+.|..+++++..+... .+-.+.++++|+...|...+
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 65657889999999999998877532 13568999999877665554
No 251
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.07 E-value=4.3e-06 Score=84.00 Aligned_cols=313 Identities=11% Similarity=0.108 Sum_probs=192.3
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeec--------------CcccCEEEEEEcCCCCEEEEEeCCCc
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--------------GHKDSVSSLAFSMDGQLLASGGLDGL 130 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~--------------~h~~~V~~v~~s~~g~~l~t~s~d~~ 130 (394)
..|+++...+++ .+.+ |...+-+.+++..+.++..... -....|.++...++|.+- .|+.++-
T Consensus 258 ~~i~~i~~d~~g-~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~~~G 334 (781)
T 3v9f_A 258 SYIFSIKQLKDN-KLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTWGGG 334 (781)
T ss_dssp CCEEEEEECTTS-EEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEBSSC
T ss_pred ceEEEEEECCCC-CEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEecCCe
Confidence 468888887644 3333 3343567788877655432111 134679999999988754 5666677
Q ss_pred EEEEeCCCCceEEEEe---------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee---cccCcCeEEEE
Q 016187 131 VQIWDPSSGNLKCTLE---------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCGD 198 (394)
Q Consensus 131 i~vwd~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~---~~h~~~v~~~~ 198 (394)
|..++..++....... .....|.++...+++.+. .|+.++-|..|+..++...... ......|.++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence 8999887665432211 123568888888777654 5565667888988765432211 12345688888
Q ss_pred ECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccC-
Q 016187 199 FTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSH- 277 (394)
Q Consensus 199 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h- 277 (394)
..++|+ |..|+.++-|..+|..+++. ..+.........|.++...+++.+.+. +. +.|..+|..+++........
T Consensus 414 ~d~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 414 KDSEGN-LWFGTYLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSN 489 (781)
T ss_dssp ECTTSC-EEEEETTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTT
T ss_pred ECCCCC-EEEEeccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcc
Confidence 877776 44566667788999877643 222211123456889988888876554 44 56889998876543222111
Q ss_pred ----CCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceec----cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Q 016187 278 ----TDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTC----DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL 349 (394)
Q Consensus 278 ----~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~ 349 (394)
...|.++...+++.+.+. +.++-|..||.......... .....|.++...+++.+.++ +.+|.|..||..
T Consensus 490 ~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~ 567 (781)
T 3v9f_A 490 SQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSAR 567 (781)
T ss_dssp SSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTT
T ss_pred cccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEE-ECCCceEEECCC
Confidence 357899999988876554 44334777887654322211 12346888888888876554 447766899987
Q ss_pred CCeEEEEeecc----cCceeEEEEccCCCEEEEEeCCCcEEEEec
Q 016187 350 SGDCVRTFSGH----RDAIQAISVSAHQDFLVSVSLDGTARVFEI 390 (394)
Q Consensus 350 ~~~~~~~~~~h----~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~ 390 (394)
+++. ..+... ...|.++...++|++.+++ ..| |..|+.
T Consensus 568 ~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~ 609 (781)
T 3v9f_A 568 NFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST-NTG-ISCYIT 609 (781)
T ss_dssp TCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC-SSC-EEEEET
T ss_pred CCcE-EEccccCCCCCceEEEEEECCCCCEEEEc-CCc-eEEEEC
Confidence 7654 344322 2457888888888876654 455 444553
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=5.6e-08 Score=95.61 Aligned_cols=272 Identities=12% Similarity=0.091 Sum_probs=172.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCCC----------E-EEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee
Q 016187 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG----------V-EWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF 187 (394)
Q Consensus 119 g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~ 187 (394)
+..++.++.++.|.-+|..+|+.+-.+...... + ..+.. .+..++.++.|+.+..+|..+++.+-.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 556777888899999999999988776532210 0 11122 2457888889999999999998876554
Q ss_pred cccCc-CeEEEEECC--CCCeEEEEeC------CCcEEEEcCCCCceEEEEcCCCCc-----------------------
Q 016187 188 SGHGS-SVTCGDFTP--DGKTICTGSD------DATLRVWNPKSGENIHVIRGHPYH----------------------- 235 (394)
Q Consensus 188 ~~h~~-~v~~~~~~~--~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~----------------------- 235 (394)
..... ....+.-+| .+..++.+.. +|.|..+|..+|+.+-.+...+..
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 33210 000000111 1334555543 589999999999987766431100
Q ss_pred -----ccCeEEEEEcCCCCEEEEEeCCC-------------------cEEEEECCCCcEEEEecc--CC-------CCEE
Q 016187 236 -----TEGLTCLTISADSTLALSGSKDG-------------------SVHMVNITTGKVVSSLVS--HT-------DSIE 282 (394)
Q Consensus 236 -----~~~i~~~~~~~~~~~l~~g~~dg-------------------~i~i~d~~~~~~~~~~~~--h~-------~~i~ 282 (394)
......++++|+..+++.++.++ .|..+|+.+|+.+-.++. |. .+..
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 00112467888888888888776 399999999998766543 22 2222
Q ss_pred EEEECCCCC---eEEEEeCCCcEEEEeCCCCCcceeccC-------------CC------------------------CE
Q 016187 283 CIGFSRSSP---WAATGSMDQKLIIWDLQHSLPRSTCDH-------------ED------------------------GV 322 (394)
Q Consensus 283 ~v~~~~~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~-------------~~------------------------~v 322 (394)
...+..+++ .++.++.+|.+.++|..+......... .. ..
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 222223454 688889999999999876544311000 00 00
Q ss_pred EEEEEeCCCCEEEEE------------------------------------eCCCeEEEEECCCCeEEEEeecccCceeE
Q 016187 323 TCLMWLGTSKYVVTG------------------------------------CVDGKVRVWDSLSGDCVRTFSGHRDAIQA 366 (394)
Q Consensus 323 ~~~~~~~~~~~l~sg------------------------------------~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 366 (394)
..++++|+..++... ..+|.|+.||..+++.+-++..+. +...
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~ 462 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNG 462 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcC
Confidence 125667766655431 134889999999999987776433 3444
Q ss_pred EEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 367 ISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 367 l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
..+...+.+++.++.||.++.||..+-
T Consensus 463 ~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 463 GTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ceeEeCCCEEEEECCcccchhhhhhcC
Confidence 445557788999999999999997653
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.03 E-value=3e-07 Score=82.02 Aligned_cols=236 Identities=9% Similarity=0.011 Sum_probs=146.1
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeec-------------------CcccCEEEEEEcC-CCCEEEEE
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ-------------------GHKDSVSSLAFSM-DGQLLASG 125 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~-------------------~h~~~V~~v~~s~-~g~~l~t~ 125 (394)
.-.++++.|+ +.++.++..++.|..|+..+++...... .....+..+++.+ +|+ |+.+
T Consensus 20 ~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~ 97 (322)
T 2fp8_A 20 APNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIV 97 (322)
T ss_dssp CCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEE
T ss_pred CceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEE
Confidence 3456788885 5545566778899999887655432110 0123578999998 565 4455
Q ss_pred eCCCcEEEEeCCCCceEEEEec----CCCCEEEEEEcC-CCCEEEEecC-----------------CCeEEEEeCCccce
Q 016187 126 GLDGLVQIWDPSSGNLKCTLEG----PGGGVEWVSWHP-RGHIVLAGSE-----------------DSTVWMWNADRAAY 183 (394)
Q Consensus 126 s~d~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~s~-----------------d~~i~iw~~~~~~~ 183 (394)
...+.|.++|..++........ .......+++.+ +++++++-.. ++.+..|+..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 4455588898776543221111 113467899999 8987776432 36788888766543
Q ss_pred eeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEEcCCCCc--eEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC----
Q 016187 184 LNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNPKSGE--NIHVIRGHPYHTEGLTCLTISADSTLALSGSK---- 256 (394)
Q Consensus 184 ~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~---- 256 (394)
..... .......++++|+++.|+.+ +..+.|.+|++.... ....+... .. ...++++++|+++++...
T Consensus 178 ~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~---~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 178 TLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI---PN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC---SS-EEEEEECTTSCEEEEEEEETTS
T ss_pred EEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC---CC-CCCeEECCCCCEEEEecCcccc
Confidence 32221 12334578999999866555 556889999986421 12222211 12 677899999987777654
Q ss_pred ------CCcEEEEECCCCcEEEEeccCC----CCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC
Q 016187 257 ------DGSVHMVNITTGKVVSSLVSHT----DSIECIGFSRSSPWAATGSMDQKLIIWDLQHS 310 (394)
Q Consensus 257 ------dg~i~i~d~~~~~~~~~~~~h~----~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~ 310 (394)
.+.|..+|. .++.+..+.... ..+.++.+ .++.+.++....+.|..+++...
T Consensus 253 ~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp STTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred cccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 467888887 477776665432 34566666 35555556566788888887643
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.03 E-value=4.4e-07 Score=80.96 Aligned_cols=236 Identities=8% Similarity=0.080 Sum_probs=151.2
Q ss_pred CEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeec-------------------ccCcCeEEEEECC-CCCeEEEEe
Q 016187 151 GVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-------------------GHGSSVTCGDFTP-DGKTICTGS 210 (394)
Q Consensus 151 ~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~-------------------~h~~~v~~~~~~~-~~~~l~s~~ 210 (394)
....++|.+++++++++..++.|..|+..++....... .....+..+++.+ +++ |+.+.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 34567889998877888888999999887654321110 0113467899998 554 55554
Q ss_pred CCCcEEEEcCCCCceEEEEcCC--CCcccCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEECCCCcE
Q 016187 211 DDATLRVWNPKSGENIHVIRGH--PYHTEGLTCLTISA-DSTLALSGSK-----------------DGSVHMVNITTGKV 270 (394)
Q Consensus 211 ~dg~i~vwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~-~~~~l~~g~~-----------------dg~i~i~d~~~~~~ 270 (394)
..+.|..+|..+++. ..+... .........+++.+ +|.++++-.. ++.|..+|..+++.
T Consensus 99 ~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 445588898765532 222211 01113467799999 9988776543 36788999877754
Q ss_pred EEEeccCCCCEEEEEECCCCCeEEEE-eCCCcEEEEeCCCCCc---ceeccCCCCEEEEEEeCCCCEEEEEeC-------
Q 016187 271 VSSLVSHTDSIECIGFSRSSPWAATG-SMDQKLIIWDLQHSLP---RSTCDHEDGVTCLMWLGTSKYVVTGCV------- 339 (394)
Q Consensus 271 ~~~~~~h~~~i~~v~~~~~~~~l~s~-s~dg~i~iwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~sg~~------- 339 (394)
..... .-...+.++++|++.+|..+ ...++|..|++..... ........ ...+++.+++++.++...
T Consensus 178 ~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 178 TLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMH 255 (322)
T ss_dssp EEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTT
T ss_pred EEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccccc
Confidence 32211 12345678999999866554 5568999999864321 11111222 677889999987766544
Q ss_pred ---CCeEEEEECCCCeEEEEeeccc----CceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 340 ---DGKVRVWDSLSGDCVRTFSGHR----DAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 340 ---dg~i~iwd~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
.+.|..+|. .++.+..+.... ..+..+++ .+++++++....+.|..++++.
T Consensus 256 ~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 256 GRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 467889986 577777776432 34677777 4677777777788999998763
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.98 E-value=2.1e-07 Score=89.69 Aligned_cols=268 Identities=12% Similarity=0.079 Sum_probs=165.8
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCceEEEEecCCCC----------E-EEEEEcCCCCEEEEecCCCeEEEEeCCccceee
Q 016187 119 GQLLASGGL-DGLVQIWDP-SSGNLKCTLEGPGGG----------V-EWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLN 185 (394)
Q Consensus 119 g~~l~t~s~-d~~i~vwd~-~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~ 185 (394)
+..++.++. ++.|.-+|. .+|+.+-.+...... + ..+.. .+..++.++.|+.+..+|..+++.+-
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 456666776 889999999 899987666432210 0 11122 24577888889999999999888764
Q ss_pred eecccC----cCeEEEEECC--CCCeEEEEeC------CCcEEEEcCCCCceEEEEcCCCCc------------------
Q 016187 186 MFSGHG----SSVTCGDFTP--DGKTICTGSD------DATLRVWNPKSGENIHVIRGHPYH------------------ 235 (394)
Q Consensus 186 ~~~~h~----~~v~~~~~~~--~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~------------------ 235 (394)
...... ..+. -+| .+..++.++. ++.|..+|..+++.+-.+......
T Consensus 140 ~~~~~~~~~~~~~~---~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLT---QAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCC---SCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceec---cCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 433211 0111 112 1345555554 799999999999987665432110
Q ss_pred ---------------cc--CeEEEEEcCCCCEEEEEeCC----------------CcEEEEECCCCcEEEEecc--CC--
Q 016187 236 ---------------TE--GLTCLTISADSTLALSGSKD----------------GSVHMVNITTGKVVSSLVS--HT-- 278 (394)
Q Consensus 236 ---------------~~--~i~~~~~~~~~~~l~~g~~d----------------g~i~i~d~~~~~~~~~~~~--h~-- 278 (394)
.. ....+++.++...++.+..+ +.|..+|..+|+.+-.++. |.
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 00 00124566766667666542 3599999999998766542 21
Q ss_pred ------CCEEEEEECCCCC---eEEEEeCCCcEEEEeCCCCCcceeccCC--------------CCE-------------
Q 016187 279 ------DSIECIGFSRSSP---WAATGSMDQKLIIWDLQHSLPRSTCDHE--------------DGV------------- 322 (394)
Q Consensus 279 ------~~i~~v~~~~~~~---~l~s~s~dg~i~iwd~~~~~~~~~~~~~--------------~~v------------- 322 (394)
.++. +....+++ .++.++.+|.+.++|..+.......... .++
T Consensus 297 d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 375 (571)
T 2ad6_A 297 DFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKG 375 (571)
T ss_dssp CCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCE
T ss_pred ccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCc
Confidence 2221 22223563 5677888999999998765443221100 001
Q ss_pred -------------EEEEEeCCCCEEEEEe-------------------------------------CCCeEEEEECCCCe
Q 016187 323 -------------TCLMWLGTSKYVVTGC-------------------------------------VDGKVRVWDSLSGD 352 (394)
Q Consensus 323 -------------~~~~~~~~~~~l~sg~-------------------------------------~dg~i~iwd~~~~~ 352 (394)
..++++|+..+++..+ .+|.|..||..+++
T Consensus 376 ~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~ 455 (571)
T 2ad6_A 376 TNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK 455 (571)
T ss_dssp EEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC
T ss_pred eEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC
Confidence 2356777777666653 35789999999999
Q ss_pred EEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 353 CVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 353 ~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
.+-++... .++....+...+..++.++.||.++.||..+-
T Consensus 456 ~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 456 AKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp EEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred EEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 98877632 23333333445667777999999999997754
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.96 E-value=5.6e-08 Score=95.63 Aligned_cols=271 Identities=10% Similarity=0.035 Sum_probs=155.3
Q ss_pred EEEEcCCCCcEEEEecCCC-----------eEEEEEcCCCeeeEe--ec-CcccCEEEEEEcCCCCEEEEEeC-CCcEEE
Q 016187 69 SVACSPTDATLVATGGGDD-----------KGFFWRINQGDWASE--IQ-GHKDSVSSLAFSMDGQLLASGGL-DGLVQI 133 (394)
Q Consensus 69 ~~~~~p~~~~~lasg~~d~-----------~v~~w~~~~~~~~~~--~~-~h~~~V~~v~~s~~g~~l~t~s~-d~~i~v 133 (394)
++++.|.++.+++.||.+. .+.+||..++++... +. .+.....++++.++|++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 4556664567777776543 578899988776432 22 13333446788899999999984 458999
Q ss_pred EeCCCCceEEEEecCCC-CEEEEEEcCCCCEEEEec-CC-----CeEEEEeCCccceeeee----cccCcCeEEEEECCC
Q 016187 134 WDPSSGNLKCTLEGPGG-GVEWVSWHPRGHIVLAGS-ED-----STVWMWNADRAAYLNMF----SGHGSSVTCGDFTPD 202 (394)
Q Consensus 134 wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~s-~d-----~~i~iw~~~~~~~~~~~----~~h~~~v~~~~~~~~ 202 (394)
||..+.+....-..+.. .-..+...+++++++.|+ .+ ..+.+||..+.+-...- ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 99988765533221211 123455667899998888 34 57899998765432210 000000000122345
Q ss_pred CCeEEEEeCC---------CcEEEEcCCCCceEEEEcCCCC------cccCeEEEEEc-CCCCEEEEEeCCC--------
Q 016187 203 GKTICTGSDD---------ATLRVWNPKSGENIHVIRGHPY------HTEGLTCLTIS-ADSTLALSGSKDG-------- 258 (394)
Q Consensus 203 ~~~l~s~~~d---------g~i~vwd~~~~~~~~~~~~~~~------~~~~i~~~~~~-~~~~~l~~g~~dg-------- 258 (394)
++.++.|+.+ ..+..||+.++........... ....-.++.+. .++++++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 5555555544 3567888887664433322111 01112334443 4778888887543
Q ss_pred ---cEEEEECCCCcEEEEe--ccCCCC-EEEEEECCCCCeEEEEeCC-----------CcEEEEeCCCCCccee--c-cC
Q 016187 259 ---SVHMVNITTGKVVSSL--VSHTDS-IECIGFSRSSPWAATGSMD-----------QKLIIWDLQHSLPRST--C-DH 318 (394)
Q Consensus 259 ---~i~i~d~~~~~~~~~~--~~h~~~-i~~v~~~~~~~~l~s~s~d-----------g~i~iwd~~~~~~~~~--~-~~ 318 (394)
.+.+||..+.+-.... ..+... -.++...|++.+++.|+.+ ..+.+||..+..-... . ..
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 6788888776644332 112222 2344567889999988754 4688999765321111 0 11
Q ss_pred CCCEEEEEEeCCCCEEEEEeC
Q 016187 319 EDGVTCLMWLGTSKYVVTGCV 339 (394)
Q Consensus 319 ~~~v~~~~~~~~~~~l~sg~~ 339 (394)
.....+..+.++++.++.|+.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 112234556789999999884
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.95 E-value=6.7e-07 Score=75.79 Aligned_cols=192 Identities=13% Similarity=0.099 Sum_probs=131.7
Q ss_pred eeeEeecC-cccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCC-EEEEEEcCCCCEEEEecCCCeEEE
Q 016187 98 DWASEIQG-HKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGG-VEWVSWHPRGHIVLAGSEDSTVWM 175 (394)
Q Consensus 98 ~~~~~~~~-h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~s~d~~i~i 175 (394)
+.+.+++- -......+.|+. +.++.+.+.++.|+++|+.+++.+..+ -.... -..+++.. ++++...-.++.+.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEE
T ss_pred EEEEEEcCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEE
Confidence 34445531 124467888874 567778888899999999999988777 33322 13355543 345555667899999
Q ss_pred EeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCC--CCcccCeEEEEEcCCCCEEEE
Q 016187 176 WNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGH--PYHTEGLTCLTISADSTLALS 253 (394)
Q Consensus 176 w~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~ 253 (394)
||..+.+.+..+...... . .+.++++.|+.+..++.|.++|+.+.+.+..+... ......++-+.+. +|.+++.
T Consensus 121 ~D~~Tl~~~~ti~~~~eG-w--GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan 196 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGEG-W--GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN 196 (268)
T ss_dssp EETTTTEEEEEEECSSCC-C--CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EECCcCcEEEEEeCCCce-e--EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE
Confidence 999999888877643221 2 33467888887777899999999999887776531 1122245566666 6766655
Q ss_pred EeCCCcEEEEECCCCcEEEEeccC-------------CCCEEEEEECCCCCe-EEEE
Q 016187 254 GSKDGSVHMVNITTGKVVSSLVSH-------------TDSIECIGFSRSSPW-AATG 296 (394)
Q Consensus 254 g~~dg~i~i~d~~~~~~~~~~~~h-------------~~~i~~v~~~~~~~~-l~s~ 296 (394)
.-.+..|.+.|..+++++..+... .+-.+.|+++|++.. +++|
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 557889999999999998876431 135789999997654 4444
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.95 E-value=8e-07 Score=74.66 Aligned_cols=192 Identities=16% Similarity=0.160 Sum_probs=130.5
Q ss_pred eeEeecCcc--cCEEEEEEcCCCCEEEEEeCC--CcEEEEeCCCCceEEEEecCCCCE-EEEEEcCCCCEEEEecCCCeE
Q 016187 99 WASEIQGHK--DSVSSLAFSMDGQLLASGGLD--GLVQIWDPSSGNLKCTLEGPGGGV-EWVSWHPRGHIVLAGSEDSTV 173 (394)
Q Consensus 99 ~~~~~~~h~--~~V~~v~~s~~g~~l~t~s~d--~~i~vwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~s~d~~i 173 (394)
.+.+++ |. .....+.|++ +.++.+.+.+ ..|+++|+.+++.+..+....... ..++.. .++++...-.++.+
T Consensus 11 v~~~~p-hd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 11 VVKRYP-HDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEE-CCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEE
T ss_pred EEEEcC-CCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEE
Confidence 344553 43 4577899987 5666666665 489999999999988876554322 234443 23445555678999
Q ss_pred EEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCC--CCcccCeEEEEEcCCCCEE
Q 016187 174 WMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGH--PYHTEGLTCLTISADSTLA 251 (394)
Q Consensus 174 ~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l 251 (394)
.+||..+.+.+..+...... . .+.++++.|+.+..++.|.++|+.+.+.+..+... ......++-+.+. ++.++
T Consensus 88 ~v~D~~tl~~~~ti~~~~~G-w--glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGEG-W--ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EEEETTTTEEEEEEECSSCC-C--EEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECCcCcEEEEEeCCCCc-e--EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 99999999888877643322 2 33456777777777899999999998887776532 1112345555554 66666
Q ss_pred EEEeCCCcEEEEECCCCcEEEEeccC-------------CCCEEEEEECCCCCeEEEEe
Q 016187 252 LSGSKDGSVHMVNITTGKVVSSLVSH-------------TDSIECIGFSRSSPWAATGS 297 (394)
Q Consensus 252 ~~g~~dg~i~i~d~~~~~~~~~~~~h-------------~~~i~~v~~~~~~~~l~s~s 297 (394)
+..-.+..|.+.|..+++++..+... .+-.+.|+++|+...|...+
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 55556889999999999998876421 13568899999766554443
No 259
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.94 E-value=3.1e-07 Score=77.86 Aligned_cols=188 Identities=11% Similarity=0.099 Sum_probs=129.1
Q ss_pred ccCCc--EEEEEEcCCCCcEEEEecCCC--eEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEe-CCCcEEEEeC
Q 016187 62 GHSDE--VYSVACSPTDATLVATGGGDD--KGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG-LDGLVQIWDP 136 (394)
Q Consensus 62 ~h~~~--v~~~~~~p~~~~~lasg~~d~--~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s-~d~~i~vwd~ 136 (394)
.|... ...|.|+ ++.+..+.|.++ .+++.|+.+++.+..+.-.. ........+++..|.... .++.+.++|.
T Consensus 38 phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 38 PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNI 114 (262)
T ss_dssp ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 45544 3788888 356777777665 89999999999888775432 333333334455655444 5889999999
Q ss_pred CCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeeccc--C---cCeEEEEECCCCCeEEEEeC
Q 016187 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--G---SSVTCGDFTPDGKTICTGSD 211 (394)
Q Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~l~s~~~ 211 (394)
.+.+.+.++.....+ ..+.+++..|+.+..++.|.++|..+.+.+..+.-. . ..++.+.|. +|+..+..-.
T Consensus 115 ~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 115 RNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp TTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred ccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc
Confidence 999999888754332 233456777777666889999999988776665432 2 233456676 6766666667
Q ss_pred CCcEEEEcCCCCceEEEEcCCCC---------cccCeEEEEEcCCCCEEEEEeC
Q 016187 212 DATLRVWNPKSGENIHVIRGHPY---------HTEGLTCLTISADSTLALSGSK 256 (394)
Q Consensus 212 dg~i~vwd~~~~~~~~~~~~~~~---------~~~~i~~~~~~~~~~~l~~g~~ 256 (394)
+..|.+.|+.+++.+..+..... .....+.++++|+++.|++.+.
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 88999999999998887764311 1235688999998776665543
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.92 E-value=9.4e-08 Score=94.03 Aligned_cols=268 Identities=13% Similarity=0.075 Sum_probs=154.0
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEeCCCCceEE--EEec-CCCCEEEEEEcCCCCEEEEecC-CCeEEE
Q 016187 112 SLAFSM-DGQLLASGGLDG-----------LVQIWDPSSGNLKC--TLEG-PGGGVEWVSWHPRGHIVLAGSE-DSTVWM 175 (394)
Q Consensus 112 ~v~~s~-~g~~l~t~s~d~-----------~i~vwd~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~s~-d~~i~i 175 (394)
.+++.+ +|++++.|+.+. .+.+||+.+++... .+.. +......+++.+++++++.|+. +..+++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888887543 58899998886532 2322 2223345677889999999884 568999
Q ss_pred EeCCccceeeeecccCc-CeEEEEECCCCCeEEEEe-CC-----CcEEEEcCCCCceEEEEcCC---CCcccCeEEEEEc
Q 016187 176 WNADRAAYLNMFSGHGS-SVTCGDFTPDGKTICTGS-DD-----ATLRVWNPKSGENIHVIRGH---PYHTEGLTCLTIS 245 (394)
Q Consensus 176 w~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~~-~d-----g~i~vwd~~~~~~~~~~~~~---~~~~~~i~~~~~~ 245 (394)
||..+.+-...-..+.. .-.++++.++++.++.|+ .+ ..+.+||+.+++ ...+... +.....- ...+.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~-W~~~~~~~~~p~~~~~~-~~~~~ 347 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT-WTSLPNAKVNPMLTADK-QGLYR 347 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE-EEEETTSCSGGGCCCCT-TGGGT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc-ceeCCCccccccccccc-cceee
Confidence 99876543322111111 112345667899999988 44 569999998765 2333110 0000000 01122
Q ss_pred CCCCEEEEEeCCC---------cEEEEECCCCcEEEEeccCC---------CCEEEEEEC-CCCCeEEEEeCCC------
Q 016187 246 ADSTLALSGSKDG---------SVHMVNITTGKVVSSLVSHT---------DSIECIGFS-RSSPWAATGSMDQ------ 300 (394)
Q Consensus 246 ~~~~~l~~g~~dg---------~i~i~d~~~~~~~~~~~~h~---------~~i~~v~~~-~~~~~l~s~s~dg------ 300 (394)
.++..++.|+.+| .+..||..+.........+. ..-.++.+. .++.+++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 4555556665444 46788887765433322111 122344443 3677778877532
Q ss_pred -----cEEEEeCCCCCcceec---cCCCC-EEEEEEeCCCCEEEEEeCC-----------CeEEEEECCCCeEEE--Eee
Q 016187 301 -----KLIIWDLQHSLPRSTC---DHEDG-VTCLMWLGTSKYVVTGCVD-----------GKVRVWDSLSGDCVR--TFS 358 (394)
Q Consensus 301 -----~i~iwd~~~~~~~~~~---~~~~~-v~~~~~~~~~~~l~sg~~d-----------g~i~iwd~~~~~~~~--~~~ 358 (394)
.+.+||..+..-.... ..... -.+++..++++.++.|+.+ ..+.+||..+.+-.. .+.
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC
Confidence 5777887653221111 11112 2344567899999998864 468999987665332 122
Q ss_pred cccCceeEEEEccCCCEEEEEeC
Q 016187 359 GHRDAIQAISVSAHQDFLVSVSL 381 (394)
Q Consensus 359 ~h~~~v~~l~~~~~~~~l~s~s~ 381 (394)
..+.......+.+++++++.||.
T Consensus 508 ~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 508 IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCCCTTEEEEECTTSCEEEEECC
T ss_pred CccccccHhhcCCCcEEEecCCC
Confidence 22222234456689999999985
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.91 E-value=7.8e-07 Score=85.83 Aligned_cols=271 Identities=12% Similarity=0.074 Sum_probs=164.6
Q ss_pred CCEEEEEeC-CCcEEEEeC-CCCceEEEEecCCCC-----------EEEEEEcCCCCE----EEEecCCCeEEEEeCCcc
Q 016187 119 GQLLASGGL-DGLVQIWDP-SSGNLKCTLEGPGGG-----------VEWVSWHPRGHI----VLAGSEDSTVWMWNADRA 181 (394)
Q Consensus 119 g~~l~t~s~-d~~i~vwd~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~s~d~~i~iw~~~~~ 181 (394)
+..++.++. ++.|.-+|. .+|+.+-.+...... ...+++.|.+.. ++.++.|+.+..+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456666776 889999999 899988766432210 122445333333 778888999999999988
Q ss_pred ceeeeecccC----cCeEE-EEECCCCCeEEEEe------CCCcEEEEcCCCCceEEEEcCCCCcc--------------
Q 016187 182 AYLNMFSGHG----SSVTC-GDFTPDGKTICTGS------DDATLRVWNPKSGENIHVIRGHPYHT-------------- 236 (394)
Q Consensus 182 ~~~~~~~~h~----~~v~~-~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~~-------------- 236 (394)
+.+-...... ..+.+ -.+ .++ .++.++ .+|.|+-+|.++|+.+-.+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 8764432211 01111 011 134 455554 38999999999999876654321100
Q ss_pred -------------------cC--eEEEEEcCCCCEEEEEeCC----------------CcEEEEECCCCcEEEEecc--C
Q 016187 237 -------------------EG--LTCLTISADSTLALSGSKD----------------GSVHMVNITTGKVVSSLVS--H 277 (394)
Q Consensus 237 -------------------~~--i~~~~~~~~~~~l~~g~~d----------------g~i~i~d~~~~~~~~~~~~--h 277 (394)
.+ -...++.++..+++.+..+ +.|.-+|..+|+.+=.++. |
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 00 0134566777777777765 3899999999998765543 2
Q ss_pred C--------CCEEEEEEC-CCC---CeEEEEeCCCcEEEEeCCCCCcceeccC--------------CCC----------
Q 016187 278 T--------DSIECIGFS-RSS---PWAATGSMDQKLIIWDLQHSLPRSTCDH--------------EDG---------- 321 (394)
Q Consensus 278 ~--------~~i~~v~~~-~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~--------------~~~---------- 321 (394)
. .++. +... .++ ..++.++.+|.+.++|..+......... ..+
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 1 1222 2222 456 4677788999999999876544322110 000
Q ss_pred ----------------EEEEEEeCCCCEEEEE---------------------------------e------CCCeEEEE
Q 016187 322 ----------------VTCLMWLGTSKYVVTG---------------------------------C------VDGKVRVW 346 (394)
Q Consensus 322 ----------------v~~~~~~~~~~~l~sg---------------------------------~------~dg~i~iw 346 (394)
...++++|+.+++++. + ..|.|..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 0134556655544432 1 35789999
Q ss_pred ECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 347 DSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 347 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
|+.+++.+-+... ..++..-.+...+.+++.++.||.++.||.++-
T Consensus 459 D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 459 NAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp CTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCC
Confidence 9999998877652 222222122335677777999999999997653
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.90 E-value=5.5e-06 Score=73.22 Aligned_cols=225 Identities=12% Similarity=0.057 Sum_probs=138.0
Q ss_pred CCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCC-C-cEEEEcCCCCceEE
Q 016187 150 GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDD-A-TLRVWNPKSGENIH 227 (394)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g-~i~vwd~~~~~~~~ 227 (394)
.....++|.++++++++-...+.|..|+..... ...+. ....+..+++.++|+++++.... + .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 457789999999987777788999999987542 22222 23467889999999966655432 2 46667777776433
Q ss_pred EEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE-EEEec---------cCCCCEEEEEECCCCCeEEE-E
Q 016187 228 VIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV-VSSLV---------SHTDSIECIGFSRSSPWAAT-G 296 (394)
Q Consensus 228 ~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~-~~~~~---------~h~~~i~~v~~~~~~~~l~s-~ 296 (394)
.... + .......++..+++..+++...++.|..+|..+++. +.... ..-...+.+ ++++.+|.. -
T Consensus 110 ~~~~-~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 110 LLTL-P-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEC-T-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEeC-C-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 2221 1 112234445556555566555689999999876531 21110 111234455 777776544 4
Q ss_pred eCCCcEEEEeCCC-CCc--ceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEE--EeecccCceeEEEEc-
Q 016187 297 SMDQKLIIWDLQH-SLP--RSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVR--TFSGHRDAIQAISVS- 370 (394)
Q Consensus 297 s~dg~i~iwd~~~-~~~--~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~--~~~~h~~~v~~l~~~- 370 (394)
...++|..|++.. ... ............+++.+++++.++-...+.|.+++.. ++... .+...-...++++|.
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 5578899999864 111 1111111234457788999887777778899999975 66532 233323457899998
Q ss_pred --cCCCEEEEEeC
Q 016187 371 --AHQDFLVSVSL 381 (394)
Q Consensus 371 --~~~~~l~s~s~ 381 (394)
++++.|+.++.
T Consensus 265 ~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 265 TEGDCTAIYVVTN 277 (306)
T ss_dssp STTTTTEEEEEEC
T ss_pred ccCCCCEEEEECC
Confidence 78776665543
No 263
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.89 E-value=6.2e-07 Score=75.99 Aligned_cols=184 Identities=12% Similarity=0.097 Sum_probs=127.1
Q ss_pred ccCCc--EEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEE--EEEEcCCCCEEEEEeCCCcEEEEeCC
Q 016187 62 GHSDE--VYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVS--SLAFSMDGQLLASGGLDGLVQIWDPS 137 (394)
Q Consensus 62 ~h~~~--v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~--~v~~s~~g~~l~t~s~d~~i~vwd~~ 137 (394)
.|... ...|.|+ ++.+..+.|.++.+++.|+++++.+..+ - ..... .+++.. +++.+..-.++.+.+||..
T Consensus 50 phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 50 PHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp ECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETT
T ss_pred cCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECC
Confidence 45443 3688887 4678888899999999999999988776 2 22333 355443 2344445578899999999
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecc--cCc---CeEEEEECCCCCeEEEEeCC
Q 016187 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG--HGS---SVTCGDFTPDGKTICTGSDD 212 (394)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~--h~~---~v~~~~~~~~~~~l~s~~~d 212 (394)
+.+.+.++.....+ . .+.++++.|+.+..++.|.++|..+.+.+..+.- +.. .++.+.|. +|+..+..-.+
T Consensus 125 Tl~~~~ti~~~~eG-w--GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s 200 (268)
T 3nok_A 125 PPQRERTTRYSGEG-W--GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHS 200 (268)
T ss_dssp TTEEEEEEECSSCC-C--CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTC
T ss_pred cCcEEEEEeCCCce-e--EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCC
Confidence 99999888754332 2 2335677777777799999999998877766543 222 34556666 67666666578
Q ss_pred CcEEEEcCCCCceEEEEcCCC----------CcccCeEEEEEcCCCCE-EEEE
Q 016187 213 ATLRVWNPKSGENIHVIRGHP----------YHTEGLTCLTISADSTL-ALSG 254 (394)
Q Consensus 213 g~i~vwd~~~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~-l~~g 254 (394)
..|.+.|+.+++.+..+.... ....-.+.++++|+++. +++|
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 899999999999887775321 11235788999997654 4444
No 264
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.88 E-value=1.2e-05 Score=71.04 Aligned_cols=229 Identities=11% Similarity=0.086 Sum_probs=138.6
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCC--CeEEEEeCCccceee
Q 016187 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED--STVWMWNADRAAYLN 185 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d--~~i~iw~~~~~~~~~ 185 (394)
.....++|+++|+++++-..++.|..||.... ....+. .......+++.++++++++.... ..+..++..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999997777778899999997753 333333 33567889999999976665432 247777766665433
Q ss_pred eecc-cCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCc-eEEEEcC-----CC-CcccCeEEEEEcCCCCEE-EEEeC
Q 016187 186 MFSG-HGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE-NIHVIRG-----HP-YHTEGLTCLTISADSTLA-LSGSK 256 (394)
Q Consensus 186 ~~~~-h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~-----~~-~~~~~i~~~~~~~~~~~l-~~g~~ 256 (394)
.... .......++..+++..+++-..++.|.++|...++ .+..... .. ........+ +|++..+ ++-..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 2211 12223444555555555555568889999986543 1211111 00 011123444 7777654 55566
Q ss_pred CCcEEEEECCC-CcE--EEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce-ecc-CCCCEEEEEEe---
Q 016187 257 DGSVHMVNITT-GKV--VSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS-TCD-HEDGVTCLMWL--- 328 (394)
Q Consensus 257 dg~i~i~d~~~-~~~--~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~-~~~-~~~~v~~~~~~--- 328 (394)
.+.|..+++.. ++. ...+. .......+++++++.+.++....+.|.+++........ ... .-...++++|.
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~ 266 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTE 266 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCST
T ss_pred CCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEeccc
Confidence 78999999864 321 11111 01245668899999887777778899999976332111 111 22458899998
Q ss_pred CCCCEEEEEeCCC
Q 016187 329 GTSKYVVTGCVDG 341 (394)
Q Consensus 329 ~~~~~l~sg~~dg 341 (394)
++++.|+..+..+
T Consensus 267 ~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 267 GDCTAIYVVTNGG 279 (306)
T ss_dssp TTTTEEEEEECTT
T ss_pred CCCCEEEEECCCC
Confidence 7877777665443
No 265
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.85 E-value=2.6e-06 Score=71.52 Aligned_cols=187 Identities=10% Similarity=0.059 Sum_probs=125.8
Q ss_pred ccCCc--EEEEEEcCCCCcEEEEecCC--CeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEE-EEeCCCcEEEEeC
Q 016187 62 GHSDE--VYSVACSPTDATLVATGGGD--DKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDP 136 (394)
Q Consensus 62 ~h~~~--v~~~~~~p~~~~~lasg~~d--~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~-t~s~d~~i~vwd~ 136 (394)
.|... ...|.|++ +.+..|.|.+ ..++..|+.+++.+..+.-... .......+.+..|. ..-.++.+.++|.
T Consensus 16 phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 56544 56899986 5677776665 4899999999998887653222 22222223344444 4457889999999
Q ss_pred CCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeeccc--C---cCeEEEEECCCCCeEEEEeC
Q 016187 137 SSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGH--G---SSVTCGDFTPDGKTICTGSD 211 (394)
Q Consensus 137 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h--~---~~v~~~~~~~~~~~l~s~~~ 211 (394)
.+.+.+.++.....+ ..+ .+++..|+.+..++.|.++|..+.+.+..+.-. . ..++.+.+. +|+..+..-.
T Consensus 93 ~tl~~~~ti~~~~~G-wgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 93 ATLTPRARFRYPGEG-WAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp TTTEEEEEEECSSCC-CEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred CcCcEEEEEeCCCCc-eEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 999999888765443 233 356666666667899999999988776655432 2 233455554 6666666656
Q ss_pred CCcEEEEcCCCCceEEEEcCCCC----------cccCeEEEEEcCCCCEEEEEe
Q 016187 212 DATLRVWNPKSGENIHVIRGHPY----------HTEGLTCLTISADSTLALSGS 255 (394)
Q Consensus 212 dg~i~vwd~~~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~l~~g~ 255 (394)
+..|.+.|+.+++.+..+..... ...-.+.++++|++..|++.+
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 78999999999998887753211 123568899999766555443
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.80 E-value=6e-06 Score=79.64 Aligned_cols=269 Identities=14% Similarity=0.115 Sum_probs=160.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCE---------EEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecc
Q 016187 119 GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGV---------EWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSG 189 (394)
Q Consensus 119 g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~ 189 (394)
+..++.++.++.|.-+|..+|+.+-.+....... ..++. .+..++.++.++.+..+|..+++.+-....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 3455555554459999999999877665332110 11122 245677888899999999998887644332
Q ss_pred cC---------cCeEEEEEC-CCCC-eEEEEe------CCCcEEEEcCCCCceEEEEcCCCCcc----------------
Q 016187 190 HG---------SSVTCGDFT-PDGK-TICTGS------DDATLRVWNPKSGENIHVIRGHPYHT---------------- 236 (394)
Q Consensus 190 h~---------~~v~~~~~~-~~~~-~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~~---------------- 236 (394)
.. .++ +.=. .+|+ .++.++ .++.|.-+|..+|+.+-.........
T Consensus 146 ~~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 146 ADHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp SCGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred CCCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 21 111 1111 1233 566655 37899999999998765543210000
Q ss_pred ----------------------cCeEEEEEcCCCCEEEEEeC--------------------C----CcEEEEECCCCcE
Q 016187 237 ----------------------EGLTCLTISADSTLALSGSK--------------------D----GSVHMVNITTGKV 270 (394)
Q Consensus 237 ----------------------~~i~~~~~~~~~~~l~~g~~--------------------d----g~i~i~d~~~~~~ 270 (394)
..-...+++|+..+++.+.. | +.|.-+|..+|+.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 00113466677777776653 2 5899999999998
Q ss_pred EEEecc--CC--------CCEEEEEEC-CCC---CeEEEEeCCCcEEEEeCCCCCcceeccCCC----------------
Q 016187 271 VSSLVS--HT--------DSIECIGFS-RSS---PWAATGSMDQKLIIWDLQHSLPRSTCDHED---------------- 320 (394)
Q Consensus 271 ~~~~~~--h~--------~~i~~v~~~-~~~---~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~---------------- 320 (394)
+=.++. |. .++. +... .++ ..++.++.+|.+.++|..+...........
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEe
Confidence 766542 32 1222 1221 456 378889999999999987654332110000
Q ss_pred ------------------C------------EEEEEEeCCCCEEEEEe--------------------------------
Q 016187 321 ------------------G------------VTCLMWLGTSKYVVTGC-------------------------------- 338 (394)
Q Consensus 321 ------------------~------------v~~~~~~~~~~~l~sg~-------------------------------- 338 (394)
. ...++++|+...+++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~ 462 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD 462 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence 0 01235555554444432
Q ss_pred -CCCeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 339 -VDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 339 -~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
.+|.|+.||+.+++.+-++.... ++..-.+...+.+++.++.||.++.||.++-
T Consensus 463 ~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 463 DHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 36889999999999887766432 3322222234677888999999999998754
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.75 E-value=2.5e-05 Score=70.40 Aligned_cols=207 Identities=11% Similarity=0.005 Sum_probs=134.0
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCceEE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQL-LASGGLDGLVQIWDPSSGNLKC 143 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~-l~t~s~d~~i~vwd~~~~~~~~ 143 (394)
.....++|+|.++.++.+-...+.|+.+++........+.........+++.+.+.. +++-...+.|.+.++.......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 457899999877778777777889999998766544434333345678999986554 4565667889999987554333
Q ss_pred EEecCCCCEEEEEEcCCCC-EEEEecCC-CeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEEcC
Q 016187 144 TLEGPGGGVEWVSWHPRGH-IVLAGSED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNP 220 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~-~l~~~s~d-~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~ 220 (394)
.+.........+++.|.+. ++++-... +.|...++............-.....++++|++..|..+ ...+.|..+|+
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 3333445678899998655 44554455 788888876543333222234457889999876666544 45678999997
Q ss_pred CCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 016187 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 275 (394)
........+... ......+++ .++.++++-...+.|..++..+|+.+..+.
T Consensus 233 dG~~~~~~~~~~---~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 233 DGSHRKAVISQG---LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TSCSCEEEECSS---CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCceEEEEeCC---CCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 643332223221 223556666 356666777777888888866665544443
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.75 E-value=6.2e-05 Score=69.08 Aligned_cols=220 Identities=9% Similarity=0.023 Sum_probs=140.2
Q ss_pred cCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC----eeeEeecCcccCEEEEEEcCCC-CEEEEEeCCCcEEEEeCC
Q 016187 63 HSDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDG-QLLASGGLDGLVQIWDPS 137 (394)
Q Consensus 63 h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~----~~~~~~~~h~~~V~~v~~s~~g-~~l~t~s~d~~i~vwd~~ 137 (394)
....+.+|+|++.++.+..+-...+.|+.+++... .....+.........+++.+.+ +++++-...+.|.+.++.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34577899999877777777677788888887652 2233333344567899999854 455555667899999987
Q ss_pred CCceEEEEecCCCCEEEEEEcCCCCEEEEec-C-CCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCc
Q 016187 138 SGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-E-DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDAT 214 (394)
Q Consensus 138 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s-~-d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~ 214 (394)
.......+.........+++.|.+..|+... . .+.|+..++............-.....+++++++..|..+ ...+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 6554444444445678899999665554433 2 3678888887554333333334567899999877777655 45678
Q ss_pred EEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEE
Q 016187 215 LRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECI 284 (394)
Q Consensus 215 i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v 284 (394)
|...|+........+... ........+++. .+.++++....+.|..+|..+|+.+..+.........+
T Consensus 270 I~~~d~dG~~~~~~~~~~-~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i 337 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDE-KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDM 337 (400)
T ss_dssp EEEEETTSCCCEEEEECS-STTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEE
T ss_pred EEEEeCCCCccEEEEeCC-CCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceE
Confidence 999998654333232221 112234566663 45666777778899999987777666554433334444
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.75 E-value=5e-05 Score=68.36 Aligned_cols=242 Identities=8% Similarity=-0.047 Sum_probs=147.6
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceeeeec
Q 016187 110 VSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFS 188 (394)
Q Consensus 110 V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~~~~ 188 (394)
.+|.+..+++ +|+.+ ....|+..++........+. ....+..++|++... ++++-...+.|+.++.........+.
T Consensus 36 ~~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 36 RSCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp SCEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CcccccccCc-eeEee-cccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 3455555533 33333 34568888877655544443 334578899997655 44555667889999987665433333
Q ss_pred ccCcCeEEEEECCCCCe-EEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCC-EEEEEeCC-CcEEEEEC
Q 016187 189 GHGSSVTCGDFTPDGKT-ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKD-GSVHMVNI 265 (394)
Q Consensus 189 ~h~~~v~~~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~d-g~i~i~d~ 265 (394)
........+++.+.+.. .++-...+.|.+.++........+.. .......++++|.+. ++++-... +.|..+++
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ---SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT---TCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC---CCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 23334567889875544 45656678899999865433322221 123467899998555 44554455 78998888
Q ss_pred CCCcEEEEeccCCCCEEEEEECCCCCeEEEE-eCCCcEEEEeCCCCCcceec-cCCCCEEEEEEeCCCCEEEEEeCCCeE
Q 016187 266 TTGKVVSSLVSHTDSIECIGFSRSSPWAATG-SMDQKLIIWDLQHSLPRSTC-DHEDGVTCLMWLGTSKYVVTGCVDGKV 343 (394)
Q Consensus 266 ~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i 343 (394)
............-...+.++++|++..|..+ ...++|..+++.....+... ........+++. .+...++-...+.|
T Consensus 190 dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V 268 (349)
T 3v64_C 190 DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSI 268 (349)
T ss_dssp TSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeE
Confidence 6543222222233467899999876655554 45678999998754333222 122345666663 44555566677889
Q ss_pred EEEECCCCeEEEEee
Q 016187 344 RVWDSLSGDCVRTFS 358 (394)
Q Consensus 344 ~iwd~~~~~~~~~~~ 358 (394)
..++..+|+.+..+.
T Consensus 269 ~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 269 NSANKFTGKNQEIIR 283 (349)
T ss_dssp EEEETTTCCSCEEEE
T ss_pred EEEEccCCCccEEec
Confidence 999877777666655
No 270
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.73 E-value=0.00023 Score=69.03 Aligned_cols=323 Identities=10% Similarity=-0.013 Sum_probs=180.8
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCee-eEeecCcccCEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCce
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDW-ASEIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNL 141 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~-~~~~~~h~~~V~~v~~s~~g~~l~-t~s~d~~i~vwd~~~~~~ 141 (394)
-....+|++++.++.++.+=...+.|+.+++..... ...+..-......|++.+.+..|+ +-...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 345678999997777777766778888888865432 233333335688999999666554 555678999999875543
Q ss_pred EEEEecCCCCEEEEEEcCCCCEEEEec--CCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEE
Q 016187 142 KCTLEGPGGGVEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVW 218 (394)
Q Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~s--~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vw 218 (394)
...+...-.....+++.|.+..|+... ..+.|...++............-.....+++.++++.|..+ ...+.|...
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 333333444566789998755444433 24567766766543333333334567889999976666544 456789999
Q ss_pred cCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCE-----------------
Q 016187 219 NPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSI----------------- 281 (394)
Q Consensus 219 d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i----------------- 281 (394)
|+........+.+...+ ...+++..+ .++++-...+.|...|..+++....+.......
T Consensus 199 ~~dG~~~~~~~~~~~~~---P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~ 274 (619)
T 3s94_A 199 NLDGTNRQAVVKGSLPH---PFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNP 274 (619)
T ss_dssp SSSCCEEC------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCT
T ss_pred cCCCCccEEEEeCCCCC---ceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCcccc
Confidence 88643322222211112 234566655 555666677889999987765333221110000
Q ss_pred ----------EEEE---------ECC-------C--------CCeEEEEeCCCcEEEEeCCCCCcce---eccCCCCEEE
Q 016187 282 ----------ECIG---------FSR-------S--------SPWAATGSMDQKLIIWDLQHSLPRS---TCDHEDGVTC 324 (394)
Q Consensus 282 ----------~~v~---------~~~-------~--------~~~l~s~s~dg~i~iwd~~~~~~~~---~~~~~~~v~~ 324 (394)
.|+. ..| + .++|+.+. .+.|+..++....... ....-..+..
T Consensus 275 C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ 353 (619)
T 3s94_A 275 CGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAIA 353 (619)
T ss_dssp TTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEEE
T ss_pred ccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEc-ccceEEEecCCCccceeEEeccccCccEE
Confidence 1110 011 1 11222222 3345555554332111 1111234678
Q ss_pred EEEeCCCCEEEEE-eCCCeEEEEECCCCeEEEEeecccCceeEEEEcc-CCCEEEEEeCCCcEEEEecc
Q 016187 325 LMWLGTSKYVVTG-CVDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSA-HQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 325 ~~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~l~s~s~dg~i~iw~~~ 391 (394)
++|.+....|.-+ ...+.|+.++.........+...-.....|++.+ .++++.+-+..+.|.+.+++
T Consensus 354 ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~ 422 (619)
T 3s94_A 354 IDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLN 422 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCC
Confidence 8999865555544 4578899998765443333333334567899986 44555665667778777654
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.73 E-value=2.2e-05 Score=66.84 Aligned_cols=202 Identities=13% Similarity=0.216 Sum_probs=133.3
Q ss_pred eecCcccCEEEEEEcCCCCEEE-EEeCCCcEEEEeCCCCceEEEEec-CCCCEEEEEEcCCCCEEEEecCCCeEEEEeCC
Q 016187 102 EIQGHKDSVSSLAFSMDGQLLA-SGGLDGLVQIWDPSSGNLKCTLEG-PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (394)
Q Consensus 102 ~~~~h~~~V~~v~~s~~g~~l~-t~s~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~ 179 (394)
.+.+-.+.+..++|+|++..|+ +...++.|...|.. ++.+..+.- .......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4566667899999999876555 46678889999987 887777642 23568889999888877776677889988865
Q ss_pred ccce---eeeec------ccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCC---CCceEEEEcC----CCCcccCeEEEE
Q 016187 180 RAAY---LNMFS------GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPK---SGENIHVIRG----HPYHTEGLTCLT 243 (394)
Q Consensus 180 ~~~~---~~~~~------~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~----~~~~~~~i~~~~ 243 (394)
.... +.... ......-.++|.|.++.|+++.......+|.+. ....+..+.. .......+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 4321 12211 123445789999998887777665555555543 1122222211 111234567889
Q ss_pred EcCC-CCEEEEEeCCCcEEEEECCCCcEEEEeccCC---------CCEEEEEECCCCCeEEEEeCCCcEEEEe
Q 016187 244 ISAD-STLALSGSKDGSVHMVNITTGKVVSSLVSHT---------DSIECIGFSRSSPWAATGSMDQKLIIWD 306 (394)
Q Consensus 244 ~~~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~---------~~i~~v~~~~~~~~l~s~s~dg~i~iwd 306 (394)
++|. +++++....+..|..+|.. ++++..+.-.. ...+.|+|.+++.+.++ +..+.+..|.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 9985 4566677778889999975 55655543221 36789999999985444 6666665554
No 272
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.72 E-value=3.5e-05 Score=68.36 Aligned_cols=209 Identities=9% Similarity=0.006 Sum_probs=130.8
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCC----CeeeEeecCcccCEEEEEEcCCCCE-EEEEeCCCcEEEEeCCC
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMDGQL-LASGGLDGLVQIWDPSS 138 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~----~~~~~~~~~h~~~V~~v~~s~~g~~-l~t~s~d~~i~vwd~~~ 138 (394)
-....+++|++.++.++.+-...+.|+.+++.. ......+.........+++++.+.. +++-...+.|.+.++..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 345678999987777877777889999998865 2222223333345678999875554 45556778999999875
Q ss_pred CceEEEEecCCCCEEEEEEcCCCCEEEEec-CC-CeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcE
Q 016187 139 GNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-ED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATL 215 (394)
Q Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s-~d-~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i 215 (394)
......+.........+++.|.+..++.+. .. +.|...++............-.....++++|++..|..+ +..+.|
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I 188 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 188 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeE
Confidence 443333333445678999998665444433 33 688888876443222222233467789999977766554 456789
Q ss_pred EEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEe
Q 016187 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL 274 (394)
Q Consensus 216 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 274 (394)
..+|+.... ...+............+++. .+.++++-...+.|..++..+++.+..+
T Consensus 189 ~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 189 SSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 999986433 23332111112234566665 4667777777889999998777655444
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.69 E-value=2.8e-05 Score=71.10 Aligned_cols=207 Identities=11% Similarity=0.004 Sum_probs=134.6
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCceEE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQL-LASGGLDGLVQIWDPSSGNLKC 143 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~-l~t~s~d~~i~vwd~~~~~~~~ 143 (394)
.....++|+|.++.++.+-...+.|+.+++........+.........+++++.+.. +++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 457789999877778777777889999998766544444333345567899986554 4555667788888876544433
Q ss_pred EEecCCCCEEEEEEcCCCCEE-EEecCC-CeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEEcC
Q 016187 144 TLEGPGGGVEWVSWHPRGHIV-LAGSED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNP 220 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l-~~~s~d-~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~ 220 (394)
.+.........+++.|.+..| ++-... +.|+.+++............-.....++|+|++..|..+ +..+.|..+|+
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 344344567889999876544 444444 788888876544333333334457889999876666544 55678999998
Q ss_pred CCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 016187 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 275 (394)
........+... ......+++ ..+.++++....+.|..++..+++.+..+.
T Consensus 276 dG~~~~~~~~~~---~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 276 DGSHRKAVISQG---LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TSCSCEEEECSS---CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCeeEEEEECC---CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 644333333221 223566677 455677777778889888876776555543
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=1.7e-05 Score=73.51 Aligned_cols=236 Identities=9% Similarity=0.101 Sum_probs=138.8
Q ss_pred EEEEEEcC-CCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeC-CC----cEEEEeCCCCc
Q 016187 67 VYSVACSP-TDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL-DG----LVQIWDPSSGN 140 (394)
Q Consensus 67 v~~~~~~p-~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~-d~----~i~vwd~~~~~ 140 (394)
-..|+++| .++.+.++-.. +.|+.+++..+....... .......|+|+++|++|+.+.. ++ .+.+.+ ..+.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESG 215 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGT
T ss_pred CCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCc
Confidence 46788998 35555555433 788889987766544333 4456889999999996666654 22 233333 2332
Q ss_pred eE--EEEecCCCCEEEEEEcC-CCCEEEEecCCCeEEEEeCCccceeeeec-ccCcCeEEEEECCCCCeE-EEEeCCCcE
Q 016187 141 LK--CTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMFS-GHGSSVTCGDFTPDGKTI-CTGSDDATL 215 (394)
Q Consensus 141 ~~--~~~~~~~~~v~~~~~~~-~~~~l~~~s~d~~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l-~s~~~dg~i 215 (394)
.. ..+.. ......++++| ++.++++-...+.|+.++...+....... +.......++|+|+|++| ++-...+.|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 22 22221 22345688999 67777777778899999987655322221 122346789999999955 455567889
Q ss_pred EEEcCCC--Cce--EEEEcCC---CC---------cccCeE-EEEEc--------CCCCEEEEEeCCCcEEEEECCCCcE
Q 016187 216 RVWNPKS--GEN--IHVIRGH---PY---------HTEGLT-CLTIS--------ADSTLALSGSKDGSVHMVNITTGKV 270 (394)
Q Consensus 216 ~vwd~~~--~~~--~~~~~~~---~~---------~~~~i~-~~~~~--------~~~~~l~~g~~dg~i~i~d~~~~~~ 270 (394)
..++... ++. +..+.+. .. .-.... .+.+. +++.++++-...+.|+.++ ..++.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 8877542 211 1222211 00 011123 34553 4567777777788899998 35543
Q ss_pred EEEecc----C-------------CCCEEEEEECCC-CCeEEEEeCCCcEEEEeC
Q 016187 271 VSSLVS----H-------------TDSIECIGFSRS-SPWAATGSMDQKLIIWDL 307 (394)
Q Consensus 271 ~~~~~~----h-------------~~~i~~v~~~~~-~~~l~s~s~dg~i~iwd~ 307 (394)
....-. . -.....++++|+ +.++++-...++|+.+++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 322211 0 114678889884 555555555667776654
No 275
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.66 E-value=9.1e-05 Score=67.64 Aligned_cols=252 Identities=8% Similarity=-0.050 Sum_probs=153.3
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceeeeecc
Q 016187 111 SSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSG 189 (394)
Q Consensus 111 ~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~~~~~ 189 (394)
.|.+..+.+ +|+.+ ....|+..++..+.....+. ....+..++|.+.+. ++++-...+.|+.++.........+..
T Consensus 80 ~C~~~~~~~-~l~~~-~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 80 SCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp CEEECSSCC-EEEEE-CBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS
T ss_pred eECCccccc-eeEee-cCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC
Confidence 344445533 44333 34678888887766554444 344578899997655 555656778999999876654333332
Q ss_pred cCcCeEEEEECCCCCe-EEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEE-EEeCC-CcEEEEECC
Q 016187 190 HGSSVTCGDFTPDGKT-ICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLAL-SGSKD-GSVHMVNIT 266 (394)
Q Consensus 190 h~~~v~~~~~~~~~~~-l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~g~~d-g~i~i~d~~ 266 (394)
.......+++.+.+.. .++-...+.|.+.++........+.. .......++++|.+..++ +-... +.|..+++.
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~---~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ---SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECS---SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC---CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 3334567888875554 45556677899988765433322221 123567889998665544 44444 788888886
Q ss_pred CCcEEEEeccCCCCEEEEEECCCCCeEEEE-eCCCcEEEEeCCCCCcceecc-CCCCEEEEEEeCCCCEEEEEeCCCeEE
Q 016187 267 TGKVVSSLVSHTDSIECIGFSRSSPWAATG-SMDQKLIIWDLQHSLPRSTCD-HEDGVTCLMWLGTSKYVVTGCVDGKVR 344 (394)
Q Consensus 267 ~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~ 344 (394)
...........-...+.++++|++..|..+ +..++|..+++.....+.... .......+++. .+...++-...+.|.
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~ 312 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSIN 312 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEE
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEE
Confidence 543222222334467899999876655544 456789999986543332221 22345667763 445556666788999
Q ss_pred EEECCCCeEEEEeecccCceeEEEE
Q 016187 345 VWDSLSGDCVRTFSGHRDAIQAISV 369 (394)
Q Consensus 345 iwd~~~~~~~~~~~~h~~~v~~l~~ 369 (394)
.++..+|+.+..+...-.....|++
T Consensus 313 ~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 313 SANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEECCCCcceEEEccCCCCCceEEE
Confidence 9997788777766543333344443
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.65 E-value=3.7e-05 Score=65.43 Aligned_cols=202 Identities=13% Similarity=0.130 Sum_probs=130.8
Q ss_pred eeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEee--cCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 016187 60 FSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEI--QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPS 137 (394)
Q Consensus 60 ~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~--~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~ 137 (394)
+.|-.+.+..+++.|+++.++|....++.|...|.. ++.+..+ .+. .....|++.+++.++++.-.++.+.++++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 445567899999999877788877788889888987 7777765 332 457788899998877776677888888865
Q ss_pred CCce---EEEEe------cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCc---cceeeee-------cccCcCeEEEE
Q 016187 138 SGNL---KCTLE------GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADR---AAYLNMF-------SGHGSSVTCGD 198 (394)
Q Consensus 138 ~~~~---~~~~~------~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~---~~~~~~~-------~~h~~~v~~~~ 198 (394)
.... ..... ........++|.|.++.|+++.......+|.... ...+... ..+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 4432 22221 1234578999999987776666554444444321 1111111 11234567899
Q ss_pred ECCC-CCeEEEEeCCCcEEEEcCCCCceEEEEcCCCC-c-----ccCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 016187 199 FTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPY-H-----TEGLTCLTISADSTLALSGSKDGSVHMVNI 265 (394)
Q Consensus 199 ~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~-----~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~ 265 (394)
++|. +++++.....+.|.++|.. ++.+..+..... + ....-.+++.++|+++++ ++-..++.+.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 9995 4556666677888999965 555554443211 0 124567899999986666 55566666643
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.63 E-value=2.7e-06 Score=84.95 Aligned_cols=197 Identities=15% Similarity=0.186 Sum_probs=113.4
Q ss_pred Cccc-CEEEEEEc-CCCCEEEEEe-CCC----cEEEEeCCCC-ceEE-EEecCCCCEEEEEEcCCCCEEEEecCC-----
Q 016187 105 GHKD-SVSSLAFS-MDGQLLASGG-LDG----LVQIWDPSSG-NLKC-TLEGPGGGVEWVSWHPRGHIVLAGSED----- 170 (394)
Q Consensus 105 ~h~~-~V~~v~~s-~~g~~l~t~s-~d~----~i~vwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~s~d----- 170 (394)
+|.- .+...+|| |||++||-+. .+| +|+++|+.++ +.+. .+.. ....++|+|+++.|+....+
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCC
Confidence 3443 68889999 9999887443 333 4999999988 6321 1111 12347899999877666654
Q ss_pred CeEEEEeCCccce--eeeec-ccCcCeEEEEECCCCCeEEEEeC---CCcEEEEcCCCCc-eE--EEEcCCCCcccCeEE
Q 016187 171 STVWMWNADRAAY--LNMFS-GHGSSVTCGDFTPDGKTICTGSD---DATLRVWNPKSGE-NI--HVIRGHPYHTEGLTC 241 (394)
Q Consensus 171 ~~i~iw~~~~~~~--~~~~~-~h~~~v~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~-~~--~~~~~~~~~~~~i~~ 241 (394)
..|+.+++.++.. ...+. ........+.|+|||++|+..+. ...|.++|+.++. .. ..+... ......+
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~s 324 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR--EKGVRYD 324 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC--CTTCCEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC--CCCceEE
Confidence 3678888876532 12222 22334567899999998876553 3458888887652 22 333221 1233344
Q ss_pred EEEcCCCCEEEEEeCC----CcEEEEECCCCcEEEE-eccCCC--CEEEEEECCCCCeEEEEeCCCcE--EEEeC
Q 016187 242 LTISADSTLALSGSKD----GSVHMVNITTGKVVSS-LVSHTD--SIECIGFSRSSPWAATGSMDQKL--IIWDL 307 (394)
Q Consensus 242 ~~~~~~~~~l~~g~~d----g~i~i~d~~~~~~~~~-~~~h~~--~i~~v~~~~~~~~l~s~s~dg~i--~iwd~ 307 (394)
+.++..+.+++....+ ..|..+++.++..... +..+.. .+..+.+. .+.++++...++.. .++++
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 4444444555555443 3677777764221122 233433 34555555 23455666777764 45564
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.61 E-value=5.6e-05 Score=70.10 Aligned_cols=236 Identities=11% Similarity=0.137 Sum_probs=139.4
Q ss_pred EEEEEEcCC--CCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCC---Cc-EEEEeCCCCc
Q 016187 67 VYSVACSPT--DATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLD---GL-VQIWDPSSGN 140 (394)
Q Consensus 67 v~~~~~~p~--~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d---~~-i~vwd~~~~~ 140 (394)
-..|+++|+ ++.++++-.. +.|+.++..+++..... ........++|+++|+++++-... .. +...+...+.
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 468899984 4555554333 88999998777765443 344568899999999955444321 12 3333322221
Q ss_pred e-EEEEecCCCCEEEEEEcC-CCCEEEEecCCCeEEEEeCCccceeeee-c-ccCcCeEEEEECCCCCeEE-EEeCCCcE
Q 016187 141 L-KCTLEGPGGGVEWVSWHP-RGHIVLAGSEDSTVWMWNADRAAYLNMF-S-GHGSSVTCGDFTPDGKTIC-TGSDDATL 215 (394)
Q Consensus 141 ~-~~~~~~~~~~v~~~~~~~-~~~~l~~~s~d~~i~iw~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~l~-s~~~dg~i 215 (394)
. ...+. .......++++| ++.++++-..++.|+.++..++.....+ . +.......++|+|++++|+ +-...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1 11121 123345678899 6777767667889999998866542222 1 1122234689999999554 44556789
Q ss_pred EEEcCC--CCce--EEEEcCC---C---------CcccCeEEEEE---------cCCCCEEEEEeCCCcEEEEECCCCcE
Q 016187 216 RVWNPK--SGEN--IHVIRGH---P---------YHTEGLTCLTI---------SADSTLALSGSKDGSVHMVNITTGKV 270 (394)
Q Consensus 216 ~vwd~~--~~~~--~~~~~~~---~---------~~~~~i~~~~~---------~~~~~~l~~g~~dg~i~i~d~~~~~~ 270 (394)
+.++.. ++.. ...+.+. . ..-.....+++ .+++.++++-...+.|+.++. ++..
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 987754 2321 1122211 0 01123566888 778888888888899999985 5543
Q ss_pred EEEeccC------------------CCCEEEEEEC-CCCCeEEEEeCCCcEEEEeC
Q 016187 271 VSSLVSH------------------TDSIECIGFS-RSSPWAATGSMDQKLIIWDL 307 (394)
Q Consensus 271 ~~~~~~h------------------~~~i~~v~~~-~~~~~l~s~s~dg~i~iwd~ 307 (394)
. ++.+. -.....|+++ +++.++++-...++|+.+++
T Consensus 377 ~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 377 T-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp E-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred E-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 3 33211 1236678888 55555555555667776654
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.60 E-value=0.00028 Score=62.48 Aligned_cols=225 Identities=11% Similarity=0.003 Sum_probs=140.0
Q ss_pred CCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCc----cceeeeecccCcCeEEEEECCC
Q 016187 128 DGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADR----AAYLNMFSGHGSSVTCGDFTPD 202 (394)
Q Consensus 128 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~ 202 (394)
...|+..|+.+.+....+. .......++|++.+. ++++-...+.|+.++... ......+...-..+..+++.+.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 3568889988877655444 345678899998654 556666678999999875 2222222222234578889875
Q ss_pred CCeE-EEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe-CC-CcEEEEECCCCcEEEEe-ccCC
Q 016187 203 GKTI-CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KD-GSVHMVNITTGKVVSSL-VSHT 278 (394)
Q Consensus 203 ~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-~d-g~i~i~d~~~~~~~~~~-~~h~ 278 (394)
+..| ++-...+.|.+.++........+.. .......++++|.+..++.+. .. +.|..+++.... ...+ ...-
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~---~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~ 163 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENI 163 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC---TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSC
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEEC---CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCC
Confidence 5544 5556678999999865433222221 123567899998665554443 33 788888875432 2222 2233
Q ss_pred CCEEEEEECCCCCeEEEEe-CCCcEEEEeCCCCCcceecc---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE
Q 016187 279 DSIECIGFSRSSPWAATGS-MDQKLIIWDLQHSLPRSTCD---HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV 354 (394)
Q Consensus 279 ~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 354 (394)
...+.+++++++..|..+. ..++|..+|+.....+.... .......+++. .+...++-...+.|..++..+++.+
T Consensus 164 ~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 164 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 242 (316)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCC
T ss_pred CCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcce
Confidence 5678999998776665554 56789999987543333221 12335666765 3555566667789999998788766
Q ss_pred EEee
Q 016187 355 RTFS 358 (394)
Q Consensus 355 ~~~~ 358 (394)
..+.
T Consensus 243 ~~i~ 246 (316)
T 1ijq_A 243 NLLA 246 (316)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.56 E-value=0.00037 Score=61.99 Aligned_cols=267 Identities=11% Similarity=0.023 Sum_probs=149.8
Q ss_pred ccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEe----cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc
Q 016187 107 KDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE----GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA 182 (394)
Q Consensus 107 ~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~ 182 (394)
...+.+|.|.+.+..++. +..+.|.. ....|+.-..+. .....+..+.|.+ +..++ ++..+.|+. ..+.++
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence 346899999888887774 45665533 333343211111 1234688899886 44444 445565544 233232
Q ss_pred eeeeec---ccCcCeEEEEECCCCCeEEEEeCCCcE-EEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC
Q 016187 183 YLNMFS---GHGSSVTCGDFTPDGKTICTGSDDATL-RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG 258 (394)
Q Consensus 183 ~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~dg~i-~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg 258 (394)
.-.... .+...+..+.+.++++.++.+. +|.| +-.| .++....+... ....+..+.+.+++.+++++...+
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~~~~~~--~~~~~~~~~~~~~~~~~~~g~~G~ 184 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQALVQE--AIGVMRNLNRSPSGEYVAVSSRGS 184 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEEEEECS--CCCCEEEEEECTTSCEEEEETTSS
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCEEeecC--CCcceEEEEEcCCCcEEEEECCCc
Confidence 211111 2234566777776666666554 5544 3333 34444444321 234688899999988887765544
Q ss_pred cEEEEEC--CCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC---Ccce-e-ccCCCCEEEEEEeCCC
Q 016187 259 SVHMVNI--TTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHS---LPRS-T-CDHEDGVTCLMWLGTS 331 (394)
Q Consensus 259 ~i~i~d~--~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~---~~~~-~-~~~~~~v~~~~~~~~~ 331 (394)
..+-.|- .+-+.+. ......+..+.+.+++.+++ ++.+|.+.+.+.... .... . ......+..+++.+++
T Consensus 185 ~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~ 261 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN 261 (327)
T ss_dssp EEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSS
T ss_pred EEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCC
Confidence 4444442 2333332 23456788899999887654 445777776632111 1111 0 1123458888888877
Q ss_pred CEEEEEeCCCeEEEEECCCCeEEEEee---cccCceeEEEEccCCCEEEEEeCCCcEEEEe
Q 016187 332 KYVVTGCVDGKVRVWDSLSGDCVRTFS---GHRDAIQAISVSAHQDFLVSVSLDGTARVFE 389 (394)
Q Consensus 332 ~~l~sg~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~ 389 (394)
..++++ .+|.| ++....|+.-..+. .+...+.++.|.+++ .++.++.+|.|.-++
T Consensus 262 ~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 262 EVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp CEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred EEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 766655 46766 34444454444443 234567889887554 466778899877665
No 281
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=7.3e-05 Score=69.31 Aligned_cols=153 Identities=7% Similarity=0.108 Sum_probs=97.6
Q ss_pred CEEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecC-CC----eEEEEeCCccc
Q 016187 109 SVSSLAFSM-DGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSE-DS----TVWMWNADRAA 182 (394)
Q Consensus 109 ~V~~v~~s~-~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~-d~----~i~iw~~~~~~ 182 (394)
....|+++| ++..|..+...+.|+++|+.++...... ........++|+++++.|+.+.. .+ .+...+. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 457899998 4556666655588999998876654433 34556889999999995544443 22 2333333 222
Q ss_pred ee--eeecccCcCeEEEEECC-CCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCC-EEEEEeCCC
Q 016187 183 YL--NMFSGHGSSVTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDG 258 (394)
Q Consensus 183 ~~--~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~dg 258 (394)
.. ..+. .......++++| +|.++++-..++.|..+++..+......... .......++++|+++ ++++-...+
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS--SSSCCEEEEECTTSSEEEEEETTTT
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC--CCCcceeEEEcCCCCEEEEEECCCC
Confidence 21 2222 123345778999 6776667667889999998766532222211 123467899999999 555566778
Q ss_pred cEEEEECC
Q 016187 259 SVHMVNIT 266 (394)
Q Consensus 259 ~i~i~d~~ 266 (394)
.|..++..
T Consensus 293 ~I~~~~~d 300 (430)
T 3tc9_A 293 YILRSDYD 300 (430)
T ss_dssp EEEEEEEE
T ss_pred EEEEEeCC
Confidence 99998765
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.51 E-value=0.00062 Score=62.37 Aligned_cols=233 Identities=11% Similarity=-0.015 Sum_probs=145.2
Q ss_pred EEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCcc----ceeeeecccCcCeE
Q 016187 121 LLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRA----AYLNMFSGHGSSVT 195 (394)
Q Consensus 121 ~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~----~~~~~~~~h~~~v~ 195 (394)
+|+.+ ....|+..++........+. ....+..++|++.+. ++++-...+.|+.+++... .....+......+.
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 44433 34678888888766554443 345678899998655 4455556788988888652 22223332344667
Q ss_pred EEEECCC-CCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe-C-CCcEEEEECCCCcEEE
Q 016187 196 CGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-K-DGSVHMVNITTGKVVS 272 (394)
Q Consensus 196 ~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-~-dg~i~i~d~~~~~~~~ 272 (394)
.+++.+. +++.++-...+.|.+.++........+.. .......++++|.+..++... . .+.|...++.......
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~---~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC---SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC---CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 8899884 44555656678899999875543333321 223477899999665555443 2 4789999986543332
Q ss_pred EeccCCCCEEEEEECCCCCeEEEEe-CCCcEEEEeCCCCCcceecc---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Q 016187 273 SLVSHTDSIECIGFSRSSPWAATGS-MDQKLIIWDLQHSLPRSTCD---HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 273 ~~~~h~~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~ 348 (394)
.....-...+.|++++++..|..+. ..++|..+|+.....+.... .......++.. .+..+.+-...+.|..+|.
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 2333335788999998777666554 46789999987544333321 12234566663 3345556667788999998
Q ss_pred CCCeEEEEeec
Q 016187 349 LSGDCVRTFSG 359 (394)
Q Consensus 349 ~~~~~~~~~~~ 359 (394)
.+|+.+..+..
T Consensus 319 ~~G~~~~~i~~ 329 (400)
T 3p5b_L 319 LTGSDVNLLAE 329 (400)
T ss_dssp SSCCCCEEEEC
T ss_pred CCCCceEEEec
Confidence 88877666653
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.50 E-value=0.00015 Score=67.22 Aligned_cols=236 Identities=11% Similarity=0.075 Sum_probs=137.4
Q ss_pred CEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCC---Ce-EEEEeCCccc
Q 016187 109 SVSSLAFSMD--GQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSED---ST-VWMWNADRAA 182 (394)
Q Consensus 109 ~V~~v~~s~~--g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d---~~-i~iw~~~~~~ 182 (394)
....|+|+|+ +..|..+...+.|+.+|+.++..... .........+++.++++++++.... .. +...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568999995 44555554448999999987776543 3345568899999999955554321 12 3333322111
Q ss_pred e-eeeecccCcCeEEEEECC-CCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCC-EEEEEeCCCc
Q 016187 183 Y-LNMFSGHGSSVTCGDFTP-DGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADST-LALSGSKDGS 259 (394)
Q Consensus 183 ~-~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~g~~dg~ 259 (394)
. ...+. .......+++.| +|.+.++-..++.|+.+|..++.....+.... .......++++|+++ ++++-...+.
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~-~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD-TKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS-CCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC-CCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 1 01111 223445678999 66666666677889999988776522221111 112234699999998 5555566789
Q ss_pred EEEEECC--CCcE--EEEeccC---------------CCCEEEEEE---------CCCCCeEEEEeCCCcEEEEeCCCCC
Q 016187 260 VHMVNIT--TGKV--VSSLVSH---------------TDSIECIGF---------SRSSPWAATGSMDQKLIIWDLQHSL 311 (394)
Q Consensus 260 i~i~d~~--~~~~--~~~~~~h---------------~~~i~~v~~---------~~~~~~l~s~s~dg~i~iwd~~~~~ 311 (394)
|+.+++. +++. ...+.+. -.....+++ .+++.+.++-...++|+.++... .
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G-~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG-R 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS-E
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC-C
Confidence 9998865 2321 0111110 123567888 77777777767778888887532 1
Q ss_pred cceeccC------------------CCCEEEEEEe-CCCCEEEEEeCCCeEEEEEC
Q 016187 312 PRSTCDH------------------EDGVTCLMWL-GTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 312 ~~~~~~~------------------~~~v~~~~~~-~~~~~l~sg~~dg~i~iwd~ 348 (394)
.....+. -.....+++. +++.++++=....+|+.++.
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 1111110 1225677777 55555555555666766653
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=0.00018 Score=67.22 Aligned_cols=242 Identities=12% Similarity=0.085 Sum_probs=143.5
Q ss_pred cEEEEEEcCC-CCcEEEEecCCCeEEEEEcCCCeeeEeecC---cccCEEEEEE-------cCCCCEEEEEeCCC-----
Q 016187 66 EVYSVACSPT-DATLVATGGGDDKGFFWRINQGDWASEIQG---HKDSVSSLAF-------SMDGQLLASGGLDG----- 129 (394)
Q Consensus 66 ~v~~~~~~p~-~~~~lasg~~d~~v~~w~~~~~~~~~~~~~---h~~~V~~v~~-------s~~g~~l~t~s~d~----- 129 (394)
.-..|+|+|. +.+++++-.....+++.|.+.+.+...+.. .......++| +++|++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4578999993 566666655556788888877776554433 2235899999 99999776666544
Q ss_pred --cEEEEeCCC-CceE-----EEEecCCCCEEEEEEcCC-CCEEEEecCCCeEEEEeCC-------ccce----------
Q 016187 130 --LVQIWDPSS-GNLK-----CTLEGPGGGVEWVSWHPR-GHIVLAGSEDSTVWMWNAD-------RAAY---------- 183 (394)
Q Consensus 130 --~i~vwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~s~d~~i~iw~~~-------~~~~---------- 183 (394)
.|.+.+... +... ..+.. ......++.+|+ +.++++-...+.|+.+++. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 255665333 2221 12221 123346788994 5666777788899999987 3432
Q ss_pred -eee-ec-ccCcCeEEEEECCCCCeEE-EEeCCCcEEEEcC--CCCce--EEEEcCC---CC---------cccCeE-EE
Q 016187 184 -LNM-FS-GHGSSVTCGDFTPDGKTIC-TGSDDATLRVWNP--KSGEN--IHVIRGH---PY---------HTEGLT-CL 242 (394)
Q Consensus 184 -~~~-~~-~h~~~v~~~~~~~~~~~l~-s~~~dg~i~vwd~--~~~~~--~~~~~~~---~~---------~~~~i~-~~ 242 (394)
... +. +.......++|+|+|++|. +=+....|+.++. .++.. ...+.+. .. .-.... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 111 11 2234457899999999654 4456677888554 33321 1222221 00 011233 44
Q ss_pred EEc-------CCCCEEEEEeCCCcEEEEECCCCcEEEEeccC------------------------CCCEEEEEECCC-C
Q 016187 243 TIS-------ADSTLALSGSKDGSVHMVNITTGKVVSSLVSH------------------------TDSIECIGFSRS-S 290 (394)
Q Consensus 243 ~~~-------~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h------------------------~~~i~~v~~~~~-~ 290 (394)
... +++.++++-...+.|+.++ .+|. +.++-+. -.....|+++++ +
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 554 5677777778889999998 4564 3343221 023567788875 5
Q ss_pred CeEEEEeCCCcEEEEeCCCC
Q 016187 291 PWAATGSMDQKLIIWDLQHS 310 (394)
Q Consensus 291 ~~l~s~s~dg~i~iwd~~~~ 310 (394)
.++++-....+|+.+++...
T Consensus 457 ~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEEEEETTTTEEEEEEECCC
T ss_pred EEEEEeCCCCEEEEEECCCC
Confidence 55555555667777776543
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=3.6e-05 Score=76.82 Aligned_cols=194 Identities=10% Similarity=0.037 Sum_probs=110.0
Q ss_pred cEEEEEEc-CCCCcEEEEecC----CCeEEEEEcCCC-eeeE-eecCcccCEEEEEEcCCCCEEEEEeCC-----CcEEE
Q 016187 66 EVYSVACS-PTDATLVATGGG----DDKGFFWRINQG-DWAS-EIQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQI 133 (394)
Q Consensus 66 ~v~~~~~~-p~~~~~lasg~~----d~~v~~w~~~~~-~~~~-~~~~h~~~V~~v~~s~~g~~l~t~s~d-----~~i~v 133 (394)
.+...+|| |++..+..+... ..+++++++.++ +.+. .+. .....++|+|||+.|+-...+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 965543333222 235999999988 6322 121 123468899999888777665 36888
Q ss_pred EeCCCCce--EEEEecC-CCCEEEEEEcCCCCEEEEec---CCCeEEEEeCCcc--ce--eeeecccCcCeEEEEECCCC
Q 016187 134 WDPSSGNL--KCTLEGP-GGGVEWVSWHPRGHIVLAGS---EDSTVWMWNADRA--AY--LNMFSGHGSSVTCGDFTPDG 203 (394)
Q Consensus 134 wd~~~~~~--~~~~~~~-~~~v~~~~~~~~~~~l~~~s---~d~~i~iw~~~~~--~~--~~~~~~h~~~v~~~~~~~~~ 203 (394)
+++.++.. ...+... ......+.|+|++++|+..+ ....|+++++.++ +. ...............|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88877642 2333322 23456789999999876554 2456888888764 22 22333344444555554444
Q ss_pred CeEEEEeCC----CcEEEEcCCCCceEE--EEcCCCCcccCeEEEEEcCCCCEEEEEeCCCc--EEEEEC
Q 016187 204 KTICTGSDD----ATLRVWNPKSGENIH--VIRGHPYHTEGLTCLTISADSTLALSGSKDGS--VHMVNI 265 (394)
Q Consensus 204 ~~l~s~~~d----g~i~vwd~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~--i~i~d~ 265 (394)
.+++....+ ..|..+++.++.... .+.. . ....+..+.+. .+.++++...++. |.++++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~-~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-S-EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-C-SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-C-CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 444454443 256666765422211 2221 1 11124445554 3455666677775 555665
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.46 E-value=0.0002 Score=63.39 Aligned_cols=207 Identities=10% Similarity=0.007 Sum_probs=131.3
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeee-EeecCcccCEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA-SEIQGHKDSVSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGNLK 142 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~-~~~~~h~~~V~~v~~s~~g~-~l~t~s~d~~i~vwd~~~~~~~ 142 (394)
..+.+++|++.++.+..+-...+.|+.+++...... ..+.........+++.+.+. ++++-...+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 356789999877778777777889999988765321 12222234566899997554 4555566788999998754433
Q ss_pred EEEecCCCCEEEEEEcCCCCEEEEec--CCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEEc
Q 016187 143 CTLEGPGGGVEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWN 219 (394)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~s--~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd 219 (394)
..+.........+++.|.+..|+.+. ..+.|...++............-.....++++|++..|..+ +..+.|..+|
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d 194 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 194 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc
Confidence 33334445678899998755554443 35788888876543322222233456889999976666554 4567899999
Q ss_pred CCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec
Q 016187 220 PKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV 275 (394)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~ 275 (394)
+........+.. .......+++. .+.++++-...+.|..++..+++....+.
T Consensus 195 ~dG~~~~~~~~~---~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 195 LDGTNRQAVVKG---SLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TTSCSCEEEECS---CCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCceEEEecC---CCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 864332222221 12335566665 34566666777889999987776554443
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.46 E-value=0.00046 Score=61.09 Aligned_cols=226 Identities=9% Similarity=-0.005 Sum_probs=136.8
Q ss_pred CCcEEEEeCCCCc--eEEEEecCCCCEEEEEEcCCC-CEEEEecCCCeEEEEeCCcccee-eeecccCcCeEEEEECCCC
Q 016187 128 DGLVQIWDPSSGN--LKCTLEGPGGGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYL-NMFSGHGSSVTCGDFTPDG 203 (394)
Q Consensus 128 d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d~~i~iw~~~~~~~~-~~~~~h~~~v~~~~~~~~~ 203 (394)
...|+..++.... ....+.+ ......+.|.+.+ .++.+-...+.|+.++....... ..+...-.....+++.+.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4678888887653 2222221 1235678999864 45566667788999988765321 1222222345678888754
Q ss_pred -CeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCcEEEEeccCCCC
Q 016187 204 -KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS--KDGSVHMVNITTGKVVSSLVSHTDS 280 (394)
Q Consensus 204 -~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~--~dg~i~i~d~~~~~~~~~~~~h~~~ 280 (394)
++.++-...+.|.++++........+.. .......+++.|.+..++... ..+.|..+++.......-....-..
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~ 167 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQ---ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW 167 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECS---SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeC---CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 4445556678899999865433222221 223567889998655555444 3578888887643222222222346
Q ss_pred EEEEEECCCCCeEEEE-eCCCcEEEEeCCCCCcceecc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q 016187 281 IECIGFSRSSPWAATG-SMDQKLIIWDLQHSLPRSTCD-HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFS 358 (394)
Q Consensus 281 i~~v~~~~~~~~l~s~-s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 358 (394)
.+.+++++++..|..+ +..++|..+|+.....+.... .......++... +..+.+-...+.|..++..+|+.++.+.
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 7899999876655554 456789999987543333222 223455666653 3455556677899999988887665554
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.43 E-value=0.0008 Score=59.82 Aligned_cols=270 Identities=9% Similarity=0.101 Sum_probs=147.2
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC-eeeEe-e--cCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQG-DWASE-I--QGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG 139 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~-~~~~~-~--~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~ 139 (394)
...+.+|.|.+. ...++. +..+.+ ++....+ .+... + ......+.+|.|++ +..++ ++..+.|.. ....|
T Consensus 35 ~~~~~~v~~~~~-~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG 108 (327)
T 2xbg_A 35 TATILDMSFIDR-HHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGG 108 (327)
T ss_dssp SSCEEEEEESSS-SCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTT
T ss_pred CCcEEEEEECCC-CcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCC
Confidence 447889998763 455664 456665 3333333 22222 1 12344689999986 44444 455665544 22334
Q ss_pred ceEEEEec---CCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc-eeeeecccCcCeEEEEECCCCCeEEEEeCCCcE
Q 016187 140 NLKCTLEG---PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA-YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (394)
Q Consensus 140 ~~~~~~~~---~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 215 (394)
+.-..+.. ..+.+..+.+.+++..++++. ++.++.- .+.++ -.....+....+..+++.|++.+++.+...+..
T Consensus 109 ~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp SSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 33222221 224577787777776666554 5544321 22222 122223445578889999998888776554444
Q ss_pred EEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEecc----CCCCEEEEEECCCCC
Q 016187 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVS----HTDSIECIGFSRSSP 291 (394)
Q Consensus 216 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~----h~~~i~~v~~~~~~~ 291 (394)
+-+|- .++....+.. .....+..+.+.+++.++++ +.+|.+++.+...++.-..+.. +...+.++.+.+++.
T Consensus 187 ~S~d~-gG~tW~~~~~--~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~ 262 (327)
T 2xbg_A 187 STWEP-GQTAWEPHNR--TTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE 262 (327)
T ss_dssp EEECT-TCSSCEEEEC--CSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC
T ss_pred EEeCC-CCCceeECCC--CCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE
Confidence 55552 1233222221 12346788889998876654 4578777764333443333221 224588999998877
Q ss_pred eEEEEeCCCcEEEEeCCCCCcceec----cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Q 016187 292 WAATGSMDQKLIIWDLQHSLPRSTC----DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDS 348 (394)
Q Consensus 292 ~l~s~s~dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~ 348 (394)
+++.+. ++.+ ++.......-... .....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 263 ~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 263 VWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp EEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred EEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 776654 6656 3333322111111 123456778887554 4666677898877653
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.43 E-value=0.00036 Score=69.43 Aligned_cols=209 Identities=9% Similarity=0.018 Sum_probs=133.5
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCC----eeeEeecCcccCEEEEEEcCCCCEE-EEEeCCCcEEEEeCCC
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQG----DWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSS 138 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~----~~~~~~~~h~~~V~~v~~s~~g~~l-~t~s~d~~i~vwd~~~ 138 (394)
...+.+|++++.++.++.+-...+.|+.+++... .....+.........|++.+.++.| ++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 4567889999877777777777788888887652 2233344344567789999877555 4556678999999875
Q ss_pred CceEEEEecCCCCEEEEEEcCCCCEEEEec-CC-CeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcE
Q 016187 139 GNLKCTLEGPGGGVEWVSWHPRGHIVLAGS-ED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATL 215 (394)
Q Consensus 139 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s-~d-~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i 215 (394)
......+.........|++.|....|+.+. .. +.|...++........+...-.....+++.+.+..|+.+ .....|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 544434444445688999999755444433 33 678888887655444444444577899999876666555 445679
Q ss_pred EEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEe
Q 016187 216 RVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL 274 (394)
Q Consensus 216 ~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~ 274 (394)
...++........+.... .......|++.. +.++++-...+.|...|..+++.+..+
T Consensus 583 ~~~d~dG~~~~~v~~~~~-~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEK-RLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEETTSCSCEEEEECTT-TTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEecCCCceEEEecCCC-ccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 999986544333333211 112345666643 356666667788888887777655544
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.33 E-value=0.0028 Score=61.46 Aligned_cols=325 Identities=7% Similarity=-0.045 Sum_probs=170.3
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeC--CCcEEEEeCCCCceE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGL--DGLVQIWDPSSGNLK 142 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~--d~~i~vwd~~~~~~~ 142 (394)
.....||+.+.++++..+-...+.|.+.++........+.........|++.|.+.+|+-... .+.|...++......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 567899999877777777788899999998654333333344556788999997665554442 356666666543333
Q ss_pred EEEecCCCCEEEEEEcCCCCEE-EEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCC
Q 016187 143 CTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPK 221 (394)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l-~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~ 221 (394)
..+...-.....+++.+.+..| ++=...+.|...++..........+.......+++..+ ...++-...+.|...|..
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKY 242 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECC
Confidence 3333344567889999875544 44455678888887654332222211122234455444 333343445566666655
Q ss_pred CCceEEEEcC-----------CC---------C-----------------------------------------------
Q 016187 222 SGENIHVIRG-----------HP---------Y----------------------------------------------- 234 (394)
Q Consensus 222 ~~~~~~~~~~-----------~~---------~----------------------------------------------- 234 (394)
+++....+.. |+ .
T Consensus 243 tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~ 322 (619)
T 3s94_A 243 TGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLL 322 (619)
T ss_dssp SCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEE
T ss_pred CCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEE
Confidence 4432211110 00 0
Q ss_pred ------------------------cccCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCC
Q 016187 235 ------------------------HTEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRS 289 (394)
Q Consensus 235 ------------------------~~~~i~~~~~~~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~ 289 (394)
....+..+++.+. +.++++-...+.|+.+++........+...-.....+++.+.
T Consensus 323 ~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~ 402 (619)
T 3s94_A 323 ARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWV 402 (619)
T ss_dssp EESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred EcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecc
Confidence 0001122222221 112222222333333333221111111111234567888764
Q ss_pred CC-eEEEEeCCCcEEEEeCCCCCcceecc-CCCCEEEEEEeCCCCEEEEEe--CCCeEEEEECCCCeEEEEe-ecccCce
Q 016187 290 SP-WAATGSMDQKLIIWDLQHSLPRSTCD-HEDGVTCLMWLGTSKYVVTGC--VDGKVRVWDSLSGDCVRTF-SGHRDAI 364 (394)
Q Consensus 290 ~~-~l~s~s~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~-~~h~~~v 364 (394)
+. +..+-+..++|.+.++.......... .-.....+++.|...+|.-.. ..+.|...+.. |.....+ ...-..-
T Consensus 403 ~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~l~~P 481 (619)
T 3s94_A 403 ARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-GSDRVVLVNTSLGWP 481 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCE
T ss_pred cCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-CCccEEEEeCCCCCC
Confidence 44 44555567788888887654333322 234578899998755554443 23667766654 3333333 2223456
Q ss_pred eEEEEccCCCEEEEE-eCCCcEEEEecc
Q 016187 365 QAISVSAHQDFLVSV-SLDGTARVFEIA 391 (394)
Q Consensus 365 ~~l~~~~~~~~l~s~-s~dg~i~iw~~~ 391 (394)
+.|++.+++..|.-+ +..+.|..+++.
T Consensus 482 ~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 482 NGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred eeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 789999866655544 445667777653
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.31 E-value=0.003 Score=62.84 Aligned_cols=227 Identities=11% Similarity=-0.008 Sum_probs=139.9
Q ss_pred CCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCC-CEEEEecCCCeEEEEeCCcc----ceeeeecccCcCeEEEEECC
Q 016187 127 LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRA----AYLNMFSGHGSSVTCGDFTP 201 (394)
Q Consensus 127 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~s~d~~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~ 201 (394)
....|+..++...+....+. ....+..++|.+.. .++++-...+.|+.+++... .....+......+..+++.+
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 44578888887665544443 34567889999854 45556666788988888653 22233332334566889988
Q ss_pred CCCeE-EEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe-CC-CcEEEEECCCCcEEEEeccCC
Q 016187 202 DGKTI-CTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KD-GSVHMVNITTGKVVSSLVSHT 278 (394)
Q Consensus 202 ~~~~l-~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-~d-g~i~i~d~~~~~~~~~~~~h~ 278 (394)
.++.| ++-...+.|.+.++........+.. .......|++.|....|+... .. +.|...++........+...-
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~---~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l 557 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 557 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEEC---TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSC
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEEEeC---CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCC
Confidence 76554 5556678899999875443333221 223478899999755554443 33 789999986554433333334
Q ss_pred CCEEEEEECCCCCeEEEEe-CCCcEEEEeCCCCCcceecc---CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEE
Q 016187 279 DSIECIGFSRSSPWAATGS-MDQKLIIWDLQHSLPRSTCD---HEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCV 354 (394)
Q Consensus 279 ~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 354 (394)
.....|++++....|+.+. ..++|..+++.......... .-.....|+...+ .+.++-...+.|...|..+|+.+
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETTTCCCC
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCCCCcce
Confidence 5788999998776666554 45678888886554333321 1123446665433 44445556788888888888766
Q ss_pred EEee
Q 016187 355 RTFS 358 (394)
Q Consensus 355 ~~~~ 358 (394)
..+.
T Consensus 637 ~~l~ 640 (791)
T 3m0c_C 637 NLLA 640 (791)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6554
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=0.00083 Score=62.69 Aligned_cols=236 Identities=11% Similarity=0.135 Sum_probs=142.9
Q ss_pred CEEEEEEcCC-C-CEEEEecCCCeEEEEeCCccceeeeeccc---CcCeEEEEE-------CCCCCeEEEEeCCC-----
Q 016187 151 GVEWVSWHPR-G-HIVLAGSEDSTVWMWNADRAAYLNMFSGH---GSSVTCGDF-------TPDGKTICTGSDDA----- 213 (394)
Q Consensus 151 ~v~~~~~~~~-~-~~l~~~s~d~~i~iw~~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~l~s~~~dg----- 213 (394)
....++|.|. . +++++-...+.|++.|..++......... ......++| +++|++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568999984 4 44455444567888998876655443321 235788999 99999666665543
Q ss_pred --cEEEEcCCC-CceE-----EEEcCCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECC-------CCcE-------
Q 016187 214 --TLRVWNPKS-GENI-----HVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNIT-------TGKV------- 270 (394)
Q Consensus 214 --~i~vwd~~~-~~~~-----~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~dg~i~i~d~~-------~~~~------- 270 (394)
.|.+.+... +... ..+.. -.....++++| ++.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA----YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE----ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred CceEEEEecCCCCceeecccceeecc----CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 255665333 1110 12211 11244678899 55666677788889999987 4543
Q ss_pred ----EEEe--ccCCCCEEEEEECCCCCeEE-EEeCCCcEEEEeCCCCC-----cceecc------CC---------CCEE
Q 016187 271 ----VSSL--VSHTDSIECIGFSRSSPWAA-TGSMDQKLIIWDLQHSL-----PRSTCD------HE---------DGVT 323 (394)
Q Consensus 271 ----~~~~--~~h~~~i~~v~~~~~~~~l~-s~s~dg~i~iwd~~~~~-----~~~~~~------~~---------~~v~ 323 (394)
+..+ .........++|+|++.+|. +-+..++|+.++..... +....+ .. ....
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 2221 12234567899999999544 44566788886543211 011111 00 1233
Q ss_pred -EEEEe-------CCCCEEEEEeCCCeEEEEECCCCeEEEEeeccc------------------------CceeEEEEcc
Q 016187 324 -CLMWL-------GTSKYVVTGCVDGKVRVWDSLSGDCVRTFSGHR------------------------DAIQAISVSA 371 (394)
Q Consensus 324 -~~~~~-------~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~h~------------------------~~v~~l~~~~ 371 (394)
.++.. +++.+.++=....+|+.++ .+|. +.++.|.. ..-..|++.+
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 33443 4566666667788999998 4664 44554321 1246899999
Q ss_pred C-CCEEEEEeCCCcEEEEeccC
Q 016187 372 H-QDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 372 ~-~~~l~s~s~dg~i~iw~~~~ 392 (394)
+ +.++++=.....||.++++.
T Consensus 454 ~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 454 VKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp TTTEEEEEETTTTEEEEEEECC
T ss_pred CCCEEEEEeCCCCEEEEEECCC
Confidence 6 78877778889999998763
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.28 E-value=0.00086 Score=58.77 Aligned_cols=155 Identities=11% Similarity=0.055 Sum_probs=108.6
Q ss_pred EEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeE-eecC----cc--cCEEEEEE---cCCCCEEEEEe------------
Q 016187 69 SVACSPTDATLVATGGGDDKGFFWRINQGDWAS-EIQG----HK--DSVSSLAF---SMDGQLLASGG------------ 126 (394)
Q Consensus 69 ~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~-~~~~----h~--~~V~~v~~---s~~g~~l~t~s------------ 126 (394)
+++|++.++.++.+.-..++|..|+...+.... .+.+ .. ..+..|.| .|+|+++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 568888777777776688999999987553322 3332 11 13579999 68887777543
Q ss_pred -CCCcEEEEeCC---CCceEEEEec-------------CCCCEEEEEEcCCCCEEEEecCC-CeEEEEeCCccceeeee-
Q 016187 127 -LDGLVQIWDPS---SGNLKCTLEG-------------PGGGVEWVSWHPRGHIVLAGSED-STVWMWNADRAAYLNMF- 187 (394)
Q Consensus 127 -~d~~i~vwd~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~s~d-~~i~iw~~~~~~~~~~~- 187 (394)
.+..|..+|+. +++.+..... .......++..++|+..++++.- +.|...+.........+
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeee
Confidence 26779999998 7776544431 12347889999999999998888 88888877654322111
Q ss_pred ----cccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCC
Q 016187 188 ----SGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSG 223 (394)
Q Consensus 188 ----~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 223 (394)
.......+.++++|+|++|+.....|.|..+|+.+.
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 111223568999999999888877999999998743
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.27 E-value=8.2e-06 Score=80.50 Aligned_cols=218 Identities=10% Similarity=0.030 Sum_probs=125.3
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCC----CeeeEeecCcccCEEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCc
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQ----GDWASEIQGHKDSVSSLAFSMDG-QLLASGGLDGLVQIWDPSSGN 140 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~----~~~~~~~~~h~~~V~~v~~s~~g-~~l~t~s~d~~i~vwd~~~~~ 140 (394)
.+.+|+|+|.++.++.+-...+.|+.+++.. ......+.........|++.+.+ .++++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 4567788886666766666678888888764 22222222222335578888654 444555567889999987554
Q ss_pred eEEEEecCCCCEEEEEEcCCCCEEEEec-CC-CeEEEEeCCccceeeeecccCcCeEEEEECCCCCeE-EEEeCCCcEEE
Q 016187 141 LKCTLEGPGGGVEWVSWHPRGHIVLAGS-ED-STVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTI-CTGSDDATLRV 217 (394)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s-~d-~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~v 217 (394)
....+.........+++.|.+..|+.+. .. +.|..+++............-.....++|+|++..| ++-+..+.|.+
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 4333332233456788888655444433 22 677777765433222222223345678999976555 45556678999
Q ss_pred EcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEE
Q 016187 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIG 285 (394)
Q Consensus 218 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~ 285 (394)
+++..... ..+............+++..+ .++++....+.|..++..+++.+..+.........|+
T Consensus 567 ~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~ 632 (699)
T 1n7d_A 567 IDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 632 (699)
T ss_dssp ECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCC
T ss_pred EccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEE
Confidence 99864332 333211111112233445443 5666667778999999888887776644333333343
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.19 E-value=0.00029 Score=61.77 Aligned_cols=200 Identities=12% Similarity=0.090 Sum_probs=125.1
Q ss_pred CeEEEEECCCCCeEEEE-eCCCcEEEEcCCCCceEEE-EcCCC--C-cccCeEEEEE---cCCCCEEEEEe---------
Q 016187 193 SVTCGDFTPDGKTICTG-SDDATLRVWNPKSGENIHV-IRGHP--Y-HTEGLTCLTI---SADSTLALSGS--------- 255 (394)
Q Consensus 193 ~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~-~~~~~--~-~~~~i~~~~~---~~~~~~l~~g~--------- 255 (394)
..-+.+|.+....|..+ -..++|..||...+..... +.... . ....+..+.+ .|+++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 34467898755555544 4799999999875543332 11100 0 0113568889 68888877644
Q ss_pred ----CCCcEEEEECC---CCcEEEEec--cC-----------CCCEEEEEECCCCCeEEEEeCC-CcEEEEeCCCCCcce
Q 016187 256 ----KDGSVHMVNIT---TGKVVSSLV--SH-----------TDSIECIGFSRSSPWAATGSMD-QKLIIWDLQHSLPRS 314 (394)
Q Consensus 256 ----~dg~i~i~d~~---~~~~~~~~~--~h-----------~~~i~~v~~~~~~~~l~s~s~d-g~i~iwd~~~~~~~~ 314 (394)
.+..|..+|+. +++.+.... .. ......++..++|...++++.. +.|..++........
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~ 173 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVST 173 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEee
Confidence 26789999998 776554332 11 1247899999999998888887 777776665432221
Q ss_pred ec------cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeE--EEEee--cc---cCceeEE-EEccCCCE-EEEE
Q 016187 315 TC------DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDC--VRTFS--GH---RDAIQAI-SVSAHQDF-LVSV 379 (394)
Q Consensus 315 ~~------~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~--~h---~~~v~~l-~~~~~~~~-l~s~ 379 (394)
.. ......+.+++.|++..|++....|.|..+|+.+... +. .. |. -.....| ..-.+++. |++.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEEEEEEc
Confidence 11 1122367899999999888887799999999875433 21 21 22 1123343 33457777 5566
Q ss_pred eCCCcEEEEeccCC
Q 016187 380 SLDGTARVFEIADF 393 (394)
Q Consensus 380 s~dg~i~iw~~~~~ 393 (394)
+..+.+.+.+-+.|
T Consensus 253 ~~~~~~~l~S~DgW 266 (334)
T 2p9w_A 253 RAPYAISFRSWDNW 266 (334)
T ss_dssp ETTEEEEEECSSTT
T ss_pred CCCCEEEEECCCCc
Confidence 66777776665544
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.17 E-value=0.00094 Score=59.05 Aligned_cols=193 Identities=13% Similarity=0.246 Sum_probs=121.6
Q ss_pred CCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECC----CCCe----EEEEeC--CCcEEEEcC--CCCceEEE
Q 016187 161 GHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTP----DGKT----ICTGSD--DATLRVWNP--KSGENIHV 228 (394)
Q Consensus 161 ~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~----l~s~~~--dg~i~vwd~--~~~~~~~~ 228 (394)
..+++.....+.+.+||+ +++.++.+.. ..+..+..-| .|+. +++.-. +.+|++|++ .+++ +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345666677889999999 6776776653 4455555554 2332 233333 578999955 4443 444
Q ss_pred EcCC--C--CcccCeEEEEE--cCC-CC-EEEEEeCCCcEEEEECC-------CCcEEEEeccCCCCEEEEEECCCCCeE
Q 016187 229 IRGH--P--YHTEGLTCLTI--SAD-ST-LALSGSKDGSVHMVNIT-------TGKVVSSLVSHTDSIECIGFSRSSPWA 293 (394)
Q Consensus 229 ~~~~--~--~~~~~i~~~~~--~~~-~~-~l~~g~~dg~i~i~d~~-------~~~~~~~~~~h~~~i~~v~~~~~~~~l 293 (394)
+... + .....+..+++ +|. +. ++++...+|.+..|++. +.+.++++.. ...+..+...+....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 4221 1 11123344455 774 43 68888889999999882 3355666654 4578889999998999
Q ss_pred EEEeCCCcEEEEeCCCC-----Ccceec--cC-CCCEEEEEEe--CCCC-EEEEEe-CCCeEEEEECC-CCeEEEEee
Q 016187 294 ATGSMDQKLIIWDLQHS-----LPRSTC--DH-EDGVTCLMWL--GTSK-YVVTGC-VDGKVRVWDSL-SGDCVRTFS 358 (394)
Q Consensus 294 ~s~s~dg~i~iwd~~~~-----~~~~~~--~~-~~~v~~~~~~--~~~~-~l~sg~-~dg~i~iwd~~-~~~~~~~~~ 358 (394)
+.+-.+.-|..++.... ...... .+ ...+..++.. ++++ ||++.+ .+.+..+||.. +.+.+.+|.
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 99999876666664421 111111 11 2357777764 4455 677666 56799999986 677888874
No 297
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.16 E-value=0.0019 Score=57.04 Aligned_cols=191 Identities=14% Similarity=0.224 Sum_probs=119.4
Q ss_pred CcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcC----CCCE--EE--EEeC--CCcEEEEeC--CCCceEEE
Q 016187 77 ATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSM----DGQL--LA--SGGL--DGLVQIWDP--SSGNLKCT 144 (394)
Q Consensus 77 ~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~----~g~~--l~--t~s~--d~~i~vwd~--~~~~~~~~ 144 (394)
+.+|+| ...+-+.++|+ +++.+..+.. +.+..+..-| .|+. |+ +.-. +.+|.+|++ .++. +..
T Consensus 41 s~ii~t-~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 41 SKLITT-NKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp CEEEEE-ETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred cEEEEE-cCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345555 45678999999 8888888764 4456665555 2322 33 3333 578999955 4444 333
Q ss_pred Eec------CC-CCEEEEEE--cCC-CC-EEEEecCCCeEEEEeCC-------ccceeeeecccCcCeEEEEECCCCCeE
Q 016187 145 LEG------PG-GGVEWVSW--HPR-GH-IVLAGSEDSTVWMWNAD-------RAAYLNMFSGHGSSVTCGDFTPDGKTI 206 (394)
Q Consensus 145 ~~~------~~-~~v~~~~~--~~~-~~-~l~~~s~d~~i~iw~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~l 206 (394)
+.. .. ..+..+++ +|. +. ++++...++.+..|.+. +.+.++.+.. .+.+-.+...+....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 321 11 34555777 664 43 67888888999999872 3345566554 3467778888888899
Q ss_pred EEEeCCCcEEEEcCC--C---CceEEEEcCCCCcccCeEEEEE--cCCCC-EEEEEe-CCCcEEEEECC-CCcEEEEe
Q 016187 207 CTGSDDATLRVWNPK--S---GENIHVIRGHPYHTEGLTCLTI--SADST-LALSGS-KDGSVHMVNIT-TGKVVSSL 274 (394)
Q Consensus 207 ~s~~~dg~i~vwd~~--~---~~~~~~~~~~~~~~~~i~~~~~--~~~~~-~l~~g~-~dg~i~i~d~~-~~~~~~~~ 274 (394)
+.+-.+.-|..++.. . ++.+..+.... ....+..|++ .++++ +|++++ .+.++.+||.. +.+.+..+
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~-l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRH-LTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSS-BCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCc-cccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 999998777777743 2 33443332211 2234666666 45555 555554 67899999996 56666665
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.06 E-value=0.017 Score=60.09 Aligned_cols=315 Identities=13% Similarity=0.146 Sum_probs=168.4
Q ss_pred CCcEEEEEEcCCC-----CcEEEEecC-CCeEEEEEcCCCeeeEe--ecCcccCEEEEEEc--CCCCEEEEEeCCCcEEE
Q 016187 64 SDEVYSVACSPTD-----ATLVATGGG-DDKGFFWRINQGDWASE--IQGHKDSVSSLAFS--MDGQLLASGGLDGLVQI 133 (394)
Q Consensus 64 ~~~v~~~~~~p~~-----~~~lasg~~-d~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s--~~g~~l~t~s~d~~i~v 133 (394)
.++|.|+++.|.. ..++|.|.. |++++|+++...+.+.. +.+ .....++.+. ....+|..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 4589999987632 467888885 99999999987665432 322 1233444332 23357889999998754
Q ss_pred --EeCCCCceEEE---EecCCCCEEEEEEcCCCC-EEEEecCCCeEEEEeCCccceeeeecccCcCe-EEEEECCC--CC
Q 016187 134 --WDPSSGNLKCT---LEGPGGGVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAAYLNMFSGHGSSV-TCGDFTPD--GK 204 (394)
Q Consensus 134 --wd~~~~~~~~~---~~~~~~~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~--~~ 204 (394)
+|..+|..... +-+ ..++.-..+...+. .+++++ +....++..+..-....+. ...+ ....|+.. .+
T Consensus 632 ~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~~~l~~s~l~--~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSNHKLVFSNVN--LKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESSSSEEEEEBS--SSCCCEEEEECCSSSTT
T ss_pred EEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcCCceEEeccC--hHHhceEeccCcccCCC
Confidence 45556654322 223 34555444544443 333333 4444445433221111111 1122 23346432 13
Q ss_pred eEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC----------------------------
Q 016187 205 TICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK---------------------------- 256 (394)
Q Consensus 205 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~---------------------------- 256 (394)
-++..+ ++.++|..+..-+.+...+ .+ -...+..++++|+.+.++.+..
T Consensus 708 g~v~~~-~~~LrI~~i~~~~~~~~~~-ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1158)
T 3ei3_A 708 SLALAN-NSTLTIGTIDEIQKLHIRT-VP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVS 784 (1158)
T ss_dssp EEEEEC-SSCEEEEEECCSSSEEEEE-EE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEEC
T ss_pred cEEEEc-CCceEEEEecccCCeeEEE-Ee-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccc
Confidence 344333 4568888764433222111 01 1223555666665554333221
Q ss_pred ---------------------CCcEEEEECCCCcEEEEecc-CCCCEEEEE---ECCC-CCeEEEEe----------CCC
Q 016187 257 ---------------------DGSVHMVNITTGKVVSSLVS-HTDSIECIG---FSRS-SPWAATGS----------MDQ 300 (394)
Q Consensus 257 ---------------------dg~i~i~d~~~~~~~~~~~~-h~~~i~~v~---~~~~-~~~l~s~s----------~dg 300 (394)
-+.|+++|..+.+.+..+.- ..+.+.+++ |..+ ..+++.|. ..|
T Consensus 785 ~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~G 864 (1158)
T 3ei3_A 785 SSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQG 864 (1158)
T ss_dssp CCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCE
T ss_pred ccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCce
Confidence 13577888887777665432 223344444 4333 46888775 357
Q ss_pred cEEEEeCCCCCcce--eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEE-EeecccCceeEEEEccCCCEEE
Q 016187 301 KLIIWDLQHSLPRS--TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVR-TFSGHRDAIQAISVSAHQDFLV 377 (394)
Q Consensus 301 ~i~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~l~ 377 (394)
.|.+|++....... .....++|++++-.. | +|++|- ..+|++|+....+.++ ....+. .|..+.....+++++
T Consensus 865 ri~vf~v~~~kL~lv~~~~v~g~v~al~~~~-g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~ 940 (1158)
T 3ei3_A 865 RIVVFQYSDGKLQTVAEKEVKGAVYSMVEFN-G-KLLASI-NSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFIL 940 (1158)
T ss_dssp EEEEEEEETTEEEEEEEEEESSCEEEEEEET-T-EEEEEE-TTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEE
T ss_pred EEEEEEEECCEEEEEEEEEcCCcCEEEeeeC-C-EEEEEc-CCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEE
Confidence 89999986332221 223456788887553 4 555543 5889999987665444 111122 233334444567888
Q ss_pred EEeCCCcEEEEec
Q 016187 378 SVSLDGTARVFEI 390 (394)
Q Consensus 378 s~s~dg~i~iw~~ 390 (394)
.|..-..|.++..
T Consensus 941 vgD~~~Sv~~~~y 953 (1158)
T 3ei3_A 941 VGDLMRSVLLLAY 953 (1158)
T ss_dssp EEESSBCEEEEEE
T ss_pred EEEhhheEEEEEE
Confidence 8887777777653
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.04 E-value=3.9e-05 Score=75.70 Aligned_cols=237 Identities=10% Similarity=-0.009 Sum_probs=133.3
Q ss_pred CCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEe-cCCCeEEEEeCCc----cceeeeecccCcCeEEEEECC
Q 016187 127 LDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAG-SEDSTVWMWNADR----AAYLNMFSGHGSSVTCGDFTP 201 (394)
Q Consensus 127 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-s~d~~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~ 201 (394)
....|++.++.+.+....+.. ...+..++|.+.+..|+.+ ...+.|+.+++.. ......+......+..+++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 345788888876655433332 2345678999876655544 4567899998875 222222222222345678886
Q ss_pred CC-CeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEe-CC-CcEEEEECCCCcEEEEe-ccC
Q 016187 202 DG-KTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGS-KD-GSVHMVNITTGKVVSSL-VSH 277 (394)
Q Consensus 202 ~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~-~d-g~i~i~d~~~~~~~~~~-~~h 277 (394)
.+ +++++-...+.|.+.++........+.. .......++++|.+.+|+... .. +.|..+++.... ...+ ...
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~---~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~ 538 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---QGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTEN 538 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCC---SSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSS
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeC---CCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCC
Confidence 44 4445555678899999865443222221 112345678888655444433 33 788888775332 1122 122
Q ss_pred CCCEEEEEECCCCCeEE-EEeCCCcEEEEeCCCCCcceeccC---CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeE
Q 016187 278 TDSIECIGFSRSSPWAA-TGSMDQKLIIWDLQHSLPRSTCDH---EDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDC 353 (394)
Q Consensus 278 ~~~i~~v~~~~~~~~l~-s~s~dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~ 353 (394)
-...+.|+++|++..|+ +-+..++|..+++.....+..... ......+++..+ .++++....+.|..++..+++.
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEE
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCc
Confidence 34567899998765554 445567899999865433322211 112233444444 4455556678999999888888
Q ss_pred EEEeecccCceeEEEE
Q 016187 354 VRTFSGHRDAIQAISV 369 (394)
Q Consensus 354 ~~~~~~h~~~v~~l~~ 369 (394)
+..+.......+.|++
T Consensus 618 ~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 618 VNLLAENLLSPEDMVL 633 (699)
T ss_dssp EECCCTTCSSCCCCCB
T ss_pred eEEeecCCCCCcEEEE
Confidence 8776543223344433
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.04 E-value=0.0048 Score=55.39 Aligned_cols=226 Identities=11% Similarity=0.062 Sum_probs=119.7
Q ss_pred CCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee---cccCcCeEEEEECCC---CCeEEEEeC-C-----CcEEE
Q 016187 150 GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCGDFTPD---GKTICTGSD-D-----ATLRV 217 (394)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~---~~h~~~v~~~~~~~~---~~~l~s~~~-d-----g~i~v 217 (394)
.....++|.|++.++++ ...+.|++++-.+...+..+ .........++|+|+ +..|..+.. . ..|..
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 34678999999985555 55699999982221212111 112346788999998 555554433 2 56777
Q ss_pred EcCCCCc---eEEEEcCCC---CcccCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCC-----------
Q 016187 218 WNPKSGE---NIHVIRGHP---YHTEGLTCLTISADSTLALSGSK-------------DGSVHMVNITT----------- 267 (394)
Q Consensus 218 wd~~~~~---~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~g~~-------------dg~i~i~d~~~----------- 267 (394)
++...+. ....+...+ ........+++.|+|.++++-+. .|+|.-++...
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 7765431 111111111 11112357899999987776432 14566666542
Q ss_pred ----CcEEEEeccCCCCEEEEEECC-CCCeEEEEeCCCc--------EEEEeCCCC----------------CcceeccC
Q 016187 268 ----GKVVSSLVSHTDSIECIGFSR-SSPWAATGSMDQK--------LIIWDLQHS----------------LPRSTCDH 318 (394)
Q Consensus 268 ----~~~~~~~~~h~~~i~~v~~~~-~~~~l~s~s~dg~--------i~iwd~~~~----------------~~~~~~~~ 318 (394)
.+.. . .++ .....++|+| ++.+.++-...+. |.+..-... .+.....+
T Consensus 190 ~~~~~~i~-a-~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~ 266 (352)
T 2ism_A 190 RGARPEVY-S-LGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQ 266 (352)
T ss_dssp TTSCTTEE-E-ECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred CCCCccEE-E-EcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCC
Confidence 0111 1 122 2345688999 5665554433232 333321110 01111122
Q ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCe----E--EEEeecccCceeEEEEccCCCEEEEEe
Q 016187 319 EDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGD----C--VRTFSGHRDAIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 319 ~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~----~--~~~~~~h~~~v~~l~~~~~~~~l~s~s 380 (394)
......++| .++.++++.-..+.|...+..... . ...+-.-...+..+++.|||.++++..
T Consensus 267 ~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 267 GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 334566776 356666666666777777654322 1 122222235788999999998777654
No 301
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.01 E-value=0.0012 Score=57.71 Aligned_cols=185 Identities=17% Similarity=0.230 Sum_probs=98.9
Q ss_pred CcEEEEec-CC-----CeEEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCc---
Q 016187 77 ATLVATGG-GD-----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGN--- 140 (394)
Q Consensus 77 ~~~lasg~-~d-----~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d-----~~i~vwd~~~~~--- 140 (394)
+.+++.|| .+ ..+..+|+.+.++... +......-.++. .++.+++.|+.+ ..+.+||+.+.+
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 34555555 22 3577888888776542 221111122222 356677777754 468899998877
Q ss_pred eEEEEecCCC--CEEEEEEcCCCCEEEEecCC-----CeEEEEeCCccceee--eecccCcCeEEEEECCCCCeEEEEeC
Q 016187 141 LKCTLEGPGG--GVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSD 211 (394)
Q Consensus 141 ~~~~~~~~~~--~v~~~~~~~~~~~l~~~s~d-----~~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~ 211 (394)
....-..+.. ....+. .++++++.|+.+ ..+.+||..+.+-.. .+........++.+ +++.++.|+.
T Consensus 93 W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 168 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGY 168 (301)
T ss_dssp CEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCC
Confidence 5433221111 112222 256677777643 368889987654322 11111111122222 5677777765
Q ss_pred C-----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcE
Q 016187 212 D-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKV 270 (394)
Q Consensus 212 d-----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~~ 270 (394)
+ ..+.+||+.+++ ...+...+.......++.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 169 ~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGH-WTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp CSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCcccceEEEEeCCCCc-EEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 4 458889988764 3333322222222233333 56777777764 4689999987753
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.00 E-value=0.014 Score=56.75 Aligned_cols=320 Identities=9% Similarity=-0.021 Sum_probs=183.5
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceEE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLL-ASGGLDGLVQIWDPSSGNLKC 143 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l-~t~s~d~~i~vwd~~~~~~~~ 143 (394)
..+.+|+|+|.++.+..+-..++.|+.+++........+..-......|++.+.+..| ++-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 4678999999888888887788999988887654444443333456789998776655 455567889999986544333
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEec--CCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEEcC
Q 016187 144 TLEGPGGGVEWVSWHPRGHIVLAGS--EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNP 220 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~s--~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~ 220 (394)
.+...-.....+++.|....|+... ..+.|...++......... ........+++.++++.|..+ ...+.|...|+
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 3334445678999998654444433 2567877777655433333 234567899999977766555 45678999998
Q ss_pred CCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCE-------------------
Q 016187 221 KSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSI------------------- 281 (394)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i------------------- 281 (394)
..... ..+... ......+++.. +.++++-...+.|...|..+++....+......+
T Consensus 196 dG~~~-~v~~~~---l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~ 270 (628)
T 4a0p_A 196 LGLNR-EVIADD---LPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECAS 270 (628)
T ss_dssp TSCSC-EEEEEC---CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTT
T ss_pred CCCce-EEeecc---CCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEecc
Confidence 65433 333221 22345667665 5666666678889999876664322221110000
Q ss_pred -------EEEEE--------CC-------CC-------CeEEEEeCCCcEEEEeCCCCCc-ce--eccCCCCEEEEEEeC
Q 016187 282 -------ECIGF--------SR-------SS-------PWAATGSMDQKLIIWDLQHSLP-RS--TCDHEDGVTCLMWLG 329 (394)
Q Consensus 282 -------~~v~~--------~~-------~~-------~~l~s~s~dg~i~iwd~~~~~~-~~--~~~~~~~v~~~~~~~ 329 (394)
.|+.. .| ++ .+|+.+. ...|+-..+..... .. ....-..+..++|.+
T Consensus 271 ~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~ 349 (628)
T 4a0p_A 271 SNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQ-KSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDP 349 (628)
T ss_dssp TGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEE-TTEEEEECCCTTCCCCEECCCTTCSCEEEEEEET
T ss_pred CCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeec-cceEEEEecccccCceEEEEehhcCCceEEEEec
Confidence 01100 11 11 1122111 22233333321110 00 111123477889988
Q ss_pred CCCEEEEE-eCCCeEEEEECCCCeEEEEeec------ccCceeEEEEccCCC-EEEEEeCCCcEEEEecc
Q 016187 330 TSKYVVTG-CVDGKVRVWDSLSGDCVRTFSG------HRDAIQAISVSAHQD-FLVSVSLDGTARVFEIA 391 (394)
Q Consensus 330 ~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~-~l~s~s~dg~i~iw~~~ 391 (394)
..+.|.-. ...+.|+.++.........+.. .......|++...++ ++.+-+..+.|.+.++.
T Consensus 350 ~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 350 LDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 76666554 3467888887654332223322 223577899988755 44465666777776653
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.99 E-value=0.0082 Score=53.81 Aligned_cols=220 Identities=17% Similarity=0.124 Sum_probs=114.0
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEE--EEe---cCCCCEEEEEEcCC---CCEE-EEecCC-----CeE
Q 016187 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKC--TLE---GPGGGVEWVSWHPR---GHIV-LAGSED-----STV 173 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~--~~~---~~~~~v~~~~~~~~---~~~l-~~~s~d-----~~i 173 (394)
.....|+|.|+|+++++ ...+.|++++ +++... .+. ........++|+|+ +..| ++-... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34679999999986554 5669999998 444321 111 12356789999998 4444 433322 567
Q ss_pred EEEeCCcc-----c-eeeeec---ccCcCeEEEEECCCCCeEEEEeC-------------CCcEEEEcCCCC--------
Q 016187 174 WMWNADRA-----A-YLNMFS---GHGSSVTCGDFTPDGKTICTGSD-------------DATLRVWNPKSG-------- 223 (394)
Q Consensus 174 ~iw~~~~~-----~-~~~~~~---~h~~~v~~~~~~~~~~~l~s~~~-------------dg~i~vwd~~~~-------- 223 (394)
..++.... + .+..+. +.......++|.|+|.+.++.+. .|.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 77776532 1 112232 11112357899999976666432 145655655320
Q ss_pred ------ceEEEEcCCCCcccCeEEEEEcC-CCCEEEEEeCCCc--------EEEEECCC----------------CcEEE
Q 016187 224 ------ENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGS--------VHMVNITT----------------GKVVS 272 (394)
Q Consensus 224 ------~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~dg~--------i~i~d~~~----------------~~~~~ 272 (394)
..+... ++ .....++++| ++.++++-..... |.+..... ..++.
T Consensus 188 ~~~~~~~~i~a~-G~----rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 262 (352)
T 2ism_A 188 GRRGARPEVYSL-GH----RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLY 262 (352)
T ss_dssp TCTTSCTTEEEE-CC----SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred CCCCCCccEEEE-cC----CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeE
Confidence 011110 10 1244578899 6666665443333 33332111 01111
Q ss_pred EeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCc-------ceeccCCCCEEEEEEeCCCCEEEEE
Q 016187 273 SLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLP-------RSTCDHEDGVTCLMWLGTSKYVVTG 337 (394)
Q Consensus 273 ~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~sg 337 (394)
.+. +......++| .++.++++.-..+.|...++..... .........+..+++.|++.+.++.
T Consensus 263 ~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 263 FWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp ECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred ecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 221 2234456666 3555555555566777666543221 1111222457777888877655554
No 304
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.93 E-value=0.0026 Score=55.73 Aligned_cols=224 Identities=10% Similarity=0.142 Sum_probs=115.9
Q ss_pred CcEEEEecC--CCeEEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCC----CcEEEEeCCCCceEEEEecC
Q 016187 77 ATLVATGGG--DDKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD----GLVQIWDPSSGNLKCTLEGP 148 (394)
Q Consensus 77 ~~~lasg~~--d~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d----~~i~vwd~~~~~~~~~~~~~ 148 (394)
..+++.||. ...+..||..+.++... +......-.++. .++.+++.|+.+ ..+.+||+.+.+....-..+
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345555654 35678889888776542 221111222222 256677777754 57888999888765432222
Q ss_pred CCCEEEEEEcCCCCEEEEecCC------CeEEEEeCCccceeee--ecccCcCeEEEEECCCCCeEEEEeC---------
Q 016187 149 GGGVEWVSWHPRGHIVLAGSED------STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD--------- 211 (394)
Q Consensus 149 ~~~v~~~~~~~~~~~l~~~s~d------~~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~--------- 211 (394)
.......+...++++++.|+.+ ..+.+||..+.+-... +........++.+ +++.++.|+.
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEE
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccc
Confidence 2211111122256777777755 4688899876543221 1111111122222 5666666653
Q ss_pred CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEEE--EeccCCCCEEEE
Q 016187 212 DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVVS--SLVSHTDSIECI 284 (394)
Q Consensus 212 dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~~~~--~~~~h~~~i~~v 284 (394)
-..+.+||+.+++ ...+...+........+.+ ++++++.|+.+ ..+.+||+.+.+-.. .+........++
T Consensus 168 ~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 244 (306)
T 3ii7_A 168 LNSCEVYDPATET-WTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA 244 (306)
T ss_dssp CCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE
T ss_pred cceEEEeCCCCCe-EEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE
Confidence 3458899988764 3333332222222222333 56777777654 468899988765322 111111222233
Q ss_pred EECCCCCeEEEEeCC-----CcEEEEeCCC
Q 016187 285 GFSRSSPWAATGSMD-----QKLIIWDLQH 309 (394)
Q Consensus 285 ~~~~~~~~l~s~s~d-----g~i~iwd~~~ 309 (394)
.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 245 ~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 245 AV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp EE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred EE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 33 45566666643 3466666654
No 305
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.86 E-value=0.0021 Score=56.19 Aligned_cols=221 Identities=17% Similarity=0.234 Sum_probs=111.0
Q ss_pred cEEEEecCC----CeEEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCceEEEEe
Q 016187 78 TLVATGGGD----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGNLKCTLE 146 (394)
Q Consensus 78 ~~lasg~~d----~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d-----~~i~vwd~~~~~~~~~~~ 146 (394)
.+++.||.+ ..+..+|+.+.++... +......-..+.+ ++.+++.|+.+ ..+.+||+.+.+....-.
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 344555533 3467888877766542 2211111112222 56677777654 358889988876543322
Q ss_pred cCCC--CEEEEEEcCCCCEEEEecCCC-----eEEEEeCCccceeee--ecccCcCeEEEEECCCCCeEEEEeCC-----
Q 016187 147 GPGG--GVEWVSWHPRGHIVLAGSEDS-----TVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSDD----- 212 (394)
Q Consensus 147 ~~~~--~v~~~~~~~~~~~l~~~s~d~-----~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d----- 212 (394)
.+.. ....+. .++++++.|+.++ .+.+||+.+.+-... +........++.+ +++.++.|+.+
T Consensus 95 ~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 95 MRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQ 170 (302)
T ss_dssp CSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTE
T ss_pred CCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCc
Confidence 1111 112222 2566777776543 577888776543221 1111111122222 56666666543
Q ss_pred --CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEEEE--eccCCCCEEE
Q 016187 213 --ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKVVSS--LVSHTDSIEC 283 (394)
Q Consensus 213 --g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~~~~~--~~~h~~~i~~ 283 (394)
..+.+||+.+++ ...+...+........+.+ ++++++.|+.+ ..+.+||+.+.+-... +........+
T Consensus 171 ~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 171 CLSTVECYNATTNE-WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV 247 (302)
T ss_dssp ECCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred cccEEEEEeCCCCc-EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE
Confidence 358889987764 2333322222222223332 57777887754 4688999987653321 1111111122
Q ss_pred EEECCCCCeEEEEeCCC-----cEEEEeCCC
Q 016187 284 IGFSRSSPWAATGSMDQ-----KLIIWDLQH 309 (394)
Q Consensus 284 v~~~~~~~~l~s~s~dg-----~i~iwd~~~ 309 (394)
+.+ ++.+++.|+.++ .+.+||+.+
T Consensus 248 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 248 CAV--NGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEE--CCEEEEECCcCCCcccccEEEEcCCC
Confidence 222 455666666543 367777654
No 306
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.67 E-value=0.016 Score=50.93 Aligned_cols=182 Identities=12% Similarity=0.096 Sum_probs=96.1
Q ss_pred EEEEecCCCeEEEEEcCCCeeeE-eecCcccCEEEEEEcCCCCEEEEEeC----C-------CcEEEEeCCCCceEEEEe
Q 016187 79 LVATGGGDDKGFFWRINQGDWAS-EIQGHKDSVSSLAFSMDGQLLASGGL----D-------GLVQIWDPSSGNLKCTLE 146 (394)
Q Consensus 79 ~lasg~~d~~v~~w~~~~~~~~~-~~~~h~~~V~~v~~s~~g~~l~t~s~----d-------~~i~vwd~~~~~~~~~~~ 146 (394)
++..|| ..+..||..+.++.. .+..........+...++.+++.|+. + ..+.+||+.+.+....-.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 445565 578889998888754 22221122222333457788777773 1 127788988876543211
Q ss_pred cCCC--CEEEEEEcCCCCEEEEecCC--------CeEEEEeCCccceee--eecccCcCeEEEEECCCCCeEEEEeC-C-
Q 016187 147 GPGG--GVEWVSWHPRGHIVLAGSED--------STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSD-D- 212 (394)
Q Consensus 147 ~~~~--~v~~~~~~~~~~~l~~~s~d--------~~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~-d- 212 (394)
.+.. ....+. -++.+++.|+.+ ..+.+||..+.+-.. .+.........+. .+++.++.|+. +
T Consensus 85 ~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 85 LPSPRCLFGLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSD 160 (315)
T ss_dssp BSSCEESCEEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTT
T ss_pred CCcchhceeEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCC
Confidence 1111 111122 256666777632 458889987654222 1111111111222 35667777765 2
Q ss_pred ----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCc
Q 016187 213 ----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-----SVHMVNITTGK 269 (394)
Q Consensus 213 ----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg-----~i~i~d~~~~~ 269 (394)
..+.+||+.+.+ ...+...+.......++.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 161 ~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFE-WKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp SCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CcccceEEEEeCCCCe-EEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 468889988764 2333322222222222332 567778777654 47889988764
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.64 E-value=0.052 Score=52.63 Aligned_cols=157 Identities=9% Similarity=-0.071 Sum_probs=98.0
Q ss_pred CcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEe--CCCcEEEEeCCCCceE
Q 016187 65 DEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGG--LDGLVQIWDPSSGNLK 142 (394)
Q Consensus 65 ~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s--~d~~i~vwd~~~~~~~ 142 (394)
.....||+.+.++++..+-...+.|.+-++........+...-.....|++.|...+|+-.. ..+.|...++......
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 34567888876677777777788898888765432222334445678999999655555444 2567777777654443
Q ss_pred EEEecCCCCEEEEEEcCCCCEE-EEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCC
Q 016187 143 CTLEGPGGGVEWVSWHPRGHIV-LAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPK 221 (394)
Q Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l-~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~ 221 (394)
..+ ..-.....+++.+++..| ++=...+.|...++..... +.+.........+++.. +...++-...+.|...|..
T Consensus 160 ~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 160 TLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp EEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECC
Confidence 333 334567889999976554 4545678899999865433 23333333455666654 3444454456777777765
Q ss_pred CCc
Q 016187 222 SGE 224 (394)
Q Consensus 222 ~~~ 224 (394)
+++
T Consensus 237 tg~ 239 (628)
T 4a0p_A 237 SGQ 239 (628)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 308
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.56 E-value=0.0077 Score=52.76 Aligned_cols=186 Identities=16% Similarity=0.217 Sum_probs=97.3
Q ss_pred CCcEEEEecC----CCeEEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeC----C-----CcEEEEeCCCCc
Q 016187 76 DATLVATGGG----DDKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGL----D-----GLVQIWDPSSGN 140 (394)
Q Consensus 76 ~~~~lasg~~----d~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~----d-----~~i~vwd~~~~~ 140 (394)
+..+++-||. -..+.++|..+.++... +......-..+.+ ++.+++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3445555553 23578888888776542 1111111122222 5666666665 2 468889988776
Q ss_pred eEEEEecCC--CCEEEEEEcCCCCEEEEecCC-----CeEEEEeCCccceeee--ecccCcCeEEEEECCCCCeEEEEeC
Q 016187 141 LKCTLEGPG--GGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD 211 (394)
Q Consensus 141 ~~~~~~~~~--~~v~~~~~~~~~~~l~~~s~d-----~~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~ 211 (394)
....-..+. .....+.+ ++++++.|+.+ ..+.+||..+.+-... +........++.+ +++.++.|+.
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 543211111 11222222 56677777643 3678888876542221 1111111122222 5667777765
Q ss_pred C-----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcE
Q 016187 212 D-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGKV 270 (394)
Q Consensus 212 d-----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~~ 270 (394)
+ ..+.+||+.+++ ...+...+.......++.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 178 ~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNE-WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp CSSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCCCcCceEEEEeCCCCe-EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 4 458889987654 2333322222222233333 67777777764 5689999987653
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.53 E-value=0.0067 Score=53.05 Aligned_cols=187 Identities=15% Similarity=0.249 Sum_probs=100.9
Q ss_pred CCcEEEEecCC----CeEEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCC------CcEEEEeCCCCceEE
Q 016187 76 DATLVATGGGD----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD------GLVQIWDPSSGNLKC 143 (394)
Q Consensus 76 ~~~~lasg~~d----~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d------~~i~vwd~~~~~~~~ 143 (394)
++.+++.||.+ ..+.++|..+.++... +......-.++.+ ++.+++.|+.+ ..+.+||+.+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 34566677654 6678889888876543 2211111222222 56677777765 468899998877654
Q ss_pred EEecCCCCEEEEEEcCCCCEEEEecC---------CCeEEEEeCCccceeee--ecccCcCeEEEEECCCCCeEEEEeCC
Q 016187 144 TLEGPGGGVEWVSWHPRGHIVLAGSE---------DSTVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSDD 212 (394)
Q Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~s~---------d~~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d 212 (394)
.-..+.......+...++++++.|+. -..+.+||+.+.+-... +.........+.+ +++.++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCC
Confidence 32212111111111225666677653 34588899876543221 1111111122222 56677777654
Q ss_pred -----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 016187 213 -----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (394)
Q Consensus 213 -----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~ 269 (394)
..+.+||+.+++ ...+...+.......++.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 211 ~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNE-WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TTEEBCCEEEEETTTTE-EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCceEEEeeCCCCc-EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 358889988764 3333332222223333333 67788888754 457888887754
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.51 E-value=0.008 Score=52.39 Aligned_cols=187 Identities=13% Similarity=0.160 Sum_probs=99.7
Q ss_pred CCcEEEEecCC-----CeEEEEEcCCCe---eeEe--ecCcccCEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCc
Q 016187 76 DATLVATGGGD-----DKGFFWRINQGD---WASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSGN 140 (394)
Q Consensus 76 ~~~~lasg~~d-----~~v~~w~~~~~~---~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d-----~~i~vwd~~~~~ 140 (394)
++.+++.||.+ ..+.+||..+.+ +... +......-.++.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 34566667654 457889988776 5442 2221122222222 56677777654 368889988877
Q ss_pred eEEEEecCCCCEEEEEEcCCCCEEEEecCC-----CeEEEEeCCccceeee--ecccCcCeEEEEECCCCCeEEEEeCC-
Q 016187 141 LKCTLEGPGGGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSDD- 212 (394)
Q Consensus 141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d-----~~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d- 212 (394)
....-..+.......+...++++++.|+.+ ..+.+||+.+.+-... +........++.+ +++.++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCC
Confidence 654322222111111122256777777654 4688899876543222 1111111122222 56677777764
Q ss_pred ----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 016187 213 ----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (394)
Q Consensus 213 ----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~ 269 (394)
..+.+||+.+++ ...+...+.......++.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 218 ~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDS-WTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CcccceEEEEeCCCCc-EEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 468899998764 3333322222222223333 56777777755 356778877654
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.49 E-value=0.052 Score=48.59 Aligned_cols=237 Identities=11% Similarity=0.101 Sum_probs=125.3
Q ss_pred CEEEEEEcCCCC-EEEEecCCCeEEEEeCCccc--eeeee----cccCcCeEEEEECCC---CCeEEEEe-C-------C
Q 016187 151 GVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAA--YLNMF----SGHGSSVTCGDFTPD---GKTICTGS-D-------D 212 (394)
Q Consensus 151 ~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~--~~~~~----~~h~~~v~~~~~~~~---~~~l~s~~-~-------d 212 (394)
....++|.|+++ +++ +...+.|++++..... .+..+ .........++|+|+ +..|..+. . .
T Consensus 19 ~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 457899999998 554 4567999999854321 11111 112335678999996 55554442 2 2
Q ss_pred CcEEEEcCCCCc----eEE-EEcCCCC---cccCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCC---
Q 016187 213 ATLRVWNPKSGE----NIH-VIRGHPY---HTEGLTCLTISADSTLALSGSK-------------DGSVHMVNITTG--- 268 (394)
Q Consensus 213 g~i~vwd~~~~~----~~~-~~~~~~~---~~~~i~~~~~~~~~~~l~~g~~-------------dg~i~i~d~~~~--- 268 (394)
..|..|+...+. ... .+...+. .......+.|.|+|.++++-+. .|+|.-++....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 245556554321 111 1222211 1112346899999977666543 245666665432
Q ss_pred -----------cEEEEeccCCCCEEEEEECC-CCCeEEEEe-CCCcEEEEeCCCC-------------------------
Q 016187 269 -----------KVVSSLVSHTDSIECIGFSR-SSPWAATGS-MDQKLIIWDLQHS------------------------- 310 (394)
Q Consensus 269 -----------~~~~~~~~h~~~i~~v~~~~-~~~~l~s~s-~dg~i~iwd~~~~------------------------- 310 (394)
..+.. .++ .....++|+| ++.+.++-. .++.=.|.-+...
T Consensus 178 ~npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp TCTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 00111 122 3456789999 555444322 1111122212110
Q ss_pred ------CcceeccCCCCEEEEEEeC-------CCCEEEEEeCCCeEEEEECCCCeEEEE--e-ecccCceeEEEEccCCC
Q 016187 311 ------LPRSTCDHEDGVTCLMWLG-------TSKYVVTGCVDGKVRVWDSLSGDCVRT--F-SGHRDAIQAISVSAHQD 374 (394)
Q Consensus 311 ------~~~~~~~~~~~v~~~~~~~-------~~~~l~sg~~dg~i~iwd~~~~~~~~~--~-~~h~~~v~~l~~~~~~~ 374 (394)
.+.....+...+..++|.. ++.++++.-..+.|...++..++.... + ......+..|++.|||.
T Consensus 256 ~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 256 IVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp SCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 0001112233566777764 466777766778888887766554432 2 23345788999999998
Q ss_pred EEEEEeCCCcEEEEecc
Q 016187 375 FLVSVSLDGTARVFEIA 391 (394)
Q Consensus 375 ~l~s~s~dg~i~iw~~~ 391 (394)
++++.. +..=+||.+.
T Consensus 336 lyv~td-~~~g~I~ri~ 351 (353)
T 2g8s_A 336 LYVLTD-ESSGELLKVS 351 (353)
T ss_dssp EEEEEC-STTEEEEEEE
T ss_pred EEEEEe-CCCCEEEEEe
Confidence 766432 2333666653
No 312
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.43 E-value=0.052 Score=47.29 Aligned_cols=255 Identities=12% Similarity=0.130 Sum_probs=156.1
Q ss_pred CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEE
Q 016187 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 208 (394)
.+|.|-|+.++.....-.-.. .+.-.||..+.++.-. ..++.++|++++..++.+.-.. .|.--.|-.+ +.|+.
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~A---dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~-~~L~l 122 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISA---DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVAL 122 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCC---SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSS-SEEEE
T ss_pred CEEEEEECCCCCCcccccccc---ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCC-CeEEE
Confidence 368888888765542222111 2345688888777665 6889999999998887765444 5555566544 34444
Q ss_pred EeCCCcEEEEcCCCC-ceEEEEcCCC-CcccCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCcEEEEeccCCC
Q 016187 209 GSDDATLRVWNPKSG-ENIHVIRGHP-YHTEGLTCLTISADSTLALSGS-------KDGSVHMVNITTGKVVSSLVSHTD 279 (394)
Q Consensus 209 ~~~dg~i~vwd~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g~-------~dg~i~i~d~~~~~~~~~~~~h~~ 279 (394)
.+ +..|.-|++... ...+.+..++ .....|..-..+++.++++..+ -.|.+.+|....+ .-+.+.+|..
T Consensus 123 VT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 200 (365)
T 2xzh_A 123 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 200 (365)
T ss_dssp EE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEE
T ss_pred Ec-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeee
Confidence 33 367999998753 3444454433 2234566777888888765433 1367888987654 4456677755
Q ss_pred CEEEEEECCC---CCeEEEEeC---CCcEEEEeCCCC---Cc---cee----cc---CCCCEEEEEEeCCCCEEEEEeCC
Q 016187 280 SIECIGFSRS---SPWAATGSM---DQKLIIWDLQHS---LP---RST----CD---HEDGVTCLMWLGTSKYVVTGCVD 340 (394)
Q Consensus 280 ~i~~v~~~~~---~~~l~s~s~---dg~i~iwd~~~~---~~---~~~----~~---~~~~v~~~~~~~~~~~l~sg~~d 340 (394)
.-..+.+..+ ..+++-+.. .+++.|-++.+. .+ +.. .. ..+-..++..++....+..-+.-
T Consensus 201 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~ 280 (365)
T 2xzh_A 201 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 280 (365)
T ss_dssp EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETT
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCC
Confidence 4433333222 113333322 258888887432 11 110 01 12334567778888888888999
Q ss_pred CeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 341 GKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 341 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
|-|++||+.++.++..-.--.+.|..-+......-++.....|.|.--.++
T Consensus 281 G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 281 GYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred cEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 999999999999998766556666555554455556666677766554443
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.42 E-value=0.015 Score=50.68 Aligned_cols=185 Identities=22% Similarity=0.298 Sum_probs=98.4
Q ss_pred CCcEEEEecCC-----CeEEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCceEE
Q 016187 76 DATLVATGGGD-----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLDG-----LVQIWDPSSGNLKC 143 (394)
Q Consensus 76 ~~~~lasg~~d-----~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d~-----~i~vwd~~~~~~~~ 143 (394)
++.+++.||.+ ..+.+||..+.++... +......-.++.+ ++.+++.|+.++ .+.+||+.+.+...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 35566667644 3578889888776543 2211111222222 567777777553 57788988776654
Q ss_pred EEecCCC--CEEEEEEcCCCCEEEEecCC-------CeEEEEeCCccceee--eecccCcCeEEEEECCCCCeEEEEeCC
Q 016187 144 TLEGPGG--GVEWVSWHPRGHIVLAGSED-------STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSDD 212 (394)
Q Consensus 144 ~~~~~~~--~v~~~~~~~~~~~l~~~s~d-------~~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d 212 (394)
.-..+.. ....+. .++++++.|+.+ ..+.+||+.+.+-.. .+.........+.+ +++.++.|+.+
T Consensus 139 ~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred cCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 3221111 111222 256667776642 458889987654322 11111111122222 56777777764
Q ss_pred -----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCc
Q 016187 213 -----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDG-----SVHMVNITTGK 269 (394)
Q Consensus 213 -----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg-----~i~i~d~~~~~ 269 (394)
..+.+||+.+++ ...+...+........+.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 215 ~~~~~~~~~~yd~~~~~-W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNA-WRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCC-EeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 368899988764 3333332222222222222 567777777553 47888887664
No 314
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.29 E-value=0.043 Score=48.13 Aligned_cols=182 Identities=13% Similarity=0.158 Sum_probs=92.2
Q ss_pred EEEEecCCCeEEEEEcCCCeeeEe-ecCcccCEEEEEEcCCCCEEEEEeC----CC-------cEEEEeCCCCceEEEEe
Q 016187 79 LVATGGGDDKGFFWRINQGDWASE-IQGHKDSVSSLAFSMDGQLLASGGL----DG-------LVQIWDPSSGNLKCTLE 146 (394)
Q Consensus 79 ~lasg~~d~~v~~w~~~~~~~~~~-~~~h~~~V~~v~~s~~g~~l~t~s~----d~-------~i~vwd~~~~~~~~~~~ 146 (394)
+++-||. .+..||..+.++... +......-...+...++.+++.|+. ++ .+.+||..+.+....-.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4444443 478899888887552 2111111122233456778877873 11 17788888776543211
Q ss_pred cCC--CCEEEEEEcCCCCEEEEecCC-------CeEEEEeCCccceeee--ecccCcCeEEEEECCCCCeEEEEeC----
Q 016187 147 GPG--GGVEWVSWHPRGHIVLAGSED-------STVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSD---- 211 (394)
Q Consensus 147 ~~~--~~v~~~~~~~~~~~l~~~s~d-------~~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~---- 211 (394)
.+. .....+.+ ++++++.|+.+ ..+.+||..+.+-... +......-..+. .+++.++.|+.
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDK 171 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSS
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCC
Confidence 111 11122222 56667777653 3577888876543221 111111111112 35666666654
Q ss_pred --CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 016187 212 --DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (394)
Q Consensus 212 --dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~ 269 (394)
-..+.+||+.+++ ...+...+.......++.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 172 ~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 172 KCTNRVFIYNPKKGD-WKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CccceEEEEcCCCCE-EEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 2358899988764 3333322222222222222 56777777654 346788988765
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.19 E-value=0.12 Score=46.28 Aligned_cols=226 Identities=11% Similarity=0.046 Sum_probs=123.2
Q ss_pred CCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeee---cccCcCeEEEEECCC---CCeEEEEeC----C----CcE
Q 016187 150 GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMF---SGHGSSVTCGDFTPD---GKTICTGSD----D----ATL 215 (394)
Q Consensus 150 ~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~---~~h~~~v~~~~~~~~---~~~l~s~~~----d----g~i 215 (394)
.....++|.|++.++++ ..++.|++++....+.+..+ .........++|+|+ +..|..+.. + ..|
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 45678999999985554 55699999874322122211 112345788999997 555554433 2 567
Q ss_pred EEEcCCCC--c---e--E-EEEcCCCCcccCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCC------
Q 016187 216 RVWNPKSG--E---N--I-HVIRGHPYHTEGLTCLTISADSTLALSGSK-------------DGSVHMVNITTG------ 268 (394)
Q Consensus 216 ~vwd~~~~--~---~--~-~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~-------------dg~i~i~d~~~~------ 268 (394)
..|+.... . . + ..+.....| ....+.|.|+|.++++-+. .|+|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 77776543 1 1 1 112211122 2356889999987776432 245655555321
Q ss_pred ---cEEEEeccCCCCEEEEEECC-CCCeEEEEeCCC---cEEEEeCCCC----------------Ccceec-cCCCCEEE
Q 016187 269 ---KVVSSLVSHTDSIECIGFSR-SSPWAATGSMDQ---KLIIWDLQHS----------------LPRSTC-DHEDGVTC 324 (394)
Q Consensus 269 ---~~~~~~~~h~~~i~~v~~~~-~~~~l~s~s~dg---~i~iwd~~~~----------------~~~~~~-~~~~~v~~ 324 (394)
..+.. .++. ....++|+| ++.+.++-...+ .|.+...... .+.... ........
T Consensus 186 f~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 186 FPNSPIWS-YGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp STTCCEEE-ECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCcEEE-EccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 01111 1232 345789999 566555433222 2333221100 011111 12234677
Q ss_pred EEEe-------CCCCEEEEEeCCCeEEEEECCCC-eEE--EEe-ecccCceeEEEEccCCCEEEEEe
Q 016187 325 LMWL-------GTSKYVVTGCVDGKVRVWDSLSG-DCV--RTF-SGHRDAIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 325 ~~~~-------~~~~~l~sg~~dg~i~iwd~~~~-~~~--~~~-~~h~~~v~~l~~~~~~~~l~s~s 380 (394)
+++. .++.++++.-..+.|...+.... +.. ..+ .+-...+..+++.|||.++++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 7773 45667777667788888887643 222 233 23345788999999998777664
No 316
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.11 E-value=0.12 Score=46.14 Aligned_cols=185 Identities=15% Similarity=0.158 Sum_probs=105.6
Q ss_pred EEEEECCCCCeEEEE------------eCCCcEEEEcCCCCc-eEEEE--cCC--CCcccCeEEEEEcC--CCC--EEEE
Q 016187 195 TCGDFTPDGKTICTG------------SDDATLRVWNPKSGE-NIHVI--RGH--PYHTEGLTCLTISA--DST--LALS 253 (394)
Q Consensus 195 ~~~~~~~~~~~l~s~------------~~dg~i~vwd~~~~~-~~~~~--~~~--~~~~~~i~~~~~~~--~~~--~l~~ 253 (394)
-.+++.|+|..++++ ..+|.|.++|+.+.. ....+ .+. ....-....+.+.+ ++. ++++
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 355667776555554 268999999987421 12222 221 10112334445433 343 4455
Q ss_pred EeC--CCcEEEEECCCC-c---EEEEeccC-CCCEEEEEECCCCCeEEEEeC-----------------CCcEEEEeCCC
Q 016187 254 GSK--DGSVHMVNITTG-K---VVSSLVSH-TDSIECIGFSRSSPWAATGSM-----------------DQKLIIWDLQH 309 (394)
Q Consensus 254 g~~--dg~i~i~d~~~~-~---~~~~~~~h-~~~i~~v~~~~~~~~l~s~s~-----------------dg~i~iwd~~~ 309 (394)
... +.++.+|++... . .+.++.+. -...+.+.+.+++.+.++... .|.|.-++..
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~- 211 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN- 211 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-
Confidence 444 567888776543 2 23344332 235789999999998887641 2345445442
Q ss_pred CCcceeccCCCCEEEEEEeCCCCEEEEE-eCCCeEEEEECCC-CeE--EEEeecccCceeEEEEcc-CCCEEEEEeCC
Q 016187 310 SLPRSTCDHEDGVTCLMWLGTSKYVVTG-CVDGKVRVWDSLS-GDC--VRTFSGHRDAIQAISVSA-HQDFLVSVSLD 382 (394)
Q Consensus 310 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg-~~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~l~~~~-~~~~l~s~s~d 382 (394)
........-...+.++|+|++++|..+ +..++|..|++.. ++. .+.+. ..+....+++.+ +|++.+++..+
T Consensus 212 -~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 212 -DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp -CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred -eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCC
Confidence 222222222346889999999877665 4578999999753 332 23342 245567889998 59887766544
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.07 E-value=0.15 Score=45.42 Aligned_cols=177 Identities=12% Similarity=0.092 Sum_probs=99.5
Q ss_pred CCCeEEEEEcCCC--eee-EeecC-----cccCEEEEEEcC--CCC-EEEEE-eC--CCcEEEEeCCCC--ce--EEEEe
Q 016187 85 GDDKGFFWRINQG--DWA-SEIQG-----HKDSVSSLAFSM--DGQ-LLASG-GL--DGLVQIWDPSSG--NL--KCTLE 146 (394)
Q Consensus 85 ~d~~v~~w~~~~~--~~~-~~~~~-----h~~~V~~v~~s~--~g~-~l~t~-s~--d~~i~vwd~~~~--~~--~~~~~ 146 (394)
.+|.|.++|..+. +.. ..+.+ ..-....+.+.+ +|. +|+.+ .. +.+|.+|++..+ .. +.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6889999998732 221 12222 223456677655 454 44444 33 467778776543 22 23333
Q ss_pred cC-CCCEEEEEEcCCCCEEEEec-----------------CCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEE
Q 016187 147 GP-GGGVEWVSWHPRGHIVLAGS-----------------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (394)
Q Consensus 147 ~~-~~~v~~~~~~~~~~~l~~~s-----------------~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 208 (394)
+. -...+.+...++|.++++.. ..+.++.++.. +. +.+...-...+.++|+||+++|+.
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~-~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DV-RVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CC-EEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eE-EEeecCCcccCcceECCCCCEEEE
Confidence 32 24578899999998777754 12456556553 22 222222345688999999988765
Q ss_pred Ee-CCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcC-CCCEEEEEeCC-CcEEEEEC
Q 016187 209 GS-DDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKD-GSVHMVNI 265 (394)
Q Consensus 209 ~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~d-g~i~i~d~ 265 (394)
+. ..+.|..|++.....+...+... .....-.+++.+ +|.+.+++..+ +.|..|+.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred EeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 54 56889999976322221111101 123456778888 58887766543 34444443
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.07 E-value=0.17 Score=45.98 Aligned_cols=255 Identities=11% Similarity=0.135 Sum_probs=157.7
Q ss_pred CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEE
Q 016187 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 208 (394)
.+|.|-|+.++.....-.-. -.+.-.||..+.++.-. ..++.++|++++..++.+.-...-+. -.|-.+ +.|+.
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~Vvf-WkWis~-~~l~l 121 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTF-WKWISL-NTVAL 121 (494)
T ss_dssp CEEEEEETTSTTSCEEEECC---CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCE-EEEEET-TEEEE
T ss_pred CeEEEEECCCCCcceecccc---cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceE-EEecCC-CeEEE
Confidence 46888888876544222211 12355688888776654 68999999999888877665444343 344432 34444
Q ss_pred EeCCCcEEEEcCCCC-ceEEEEcCCC-CcccCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCcEEEEeccCCC
Q 016187 209 GSDDATLRVWNPKSG-ENIHVIRGHP-YHTEGLTCLTISADSTLALSGS-------KDGSVHMVNITTGKVVSSLVSHTD 279 (394)
Q Consensus 209 ~~~dg~i~vwd~~~~-~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g~-------~dg~i~i~d~~~~~~~~~~~~h~~ 279 (394)
.+ +..|.-|++... ...+.+..++ .....|..-..+++.++++..+ -.|.+.+|+...+ .-+.+.+|..
T Consensus 122 VT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa 199 (494)
T 1bpo_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 199 (494)
T ss_dssp EC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEE
T ss_pred Ec-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeee
Confidence 43 467999998643 3444454433 2234577777888888776432 2367888988654 3445667765
Q ss_pred CEEEEEECCCC---CeEEEEeC---CCcEEEEeCCCC------Ccceec-------cCCCCEEEEEEeCCCCEEEEEeCC
Q 016187 280 SIECIGFSRSS---PWAATGSM---DQKLIIWDLQHS------LPRSTC-------DHEDGVTCLMWLGTSKYVVTGCVD 340 (394)
Q Consensus 280 ~i~~v~~~~~~---~~l~s~s~---dg~i~iwd~~~~------~~~~~~-------~~~~~v~~~~~~~~~~~l~sg~~d 340 (394)
.-..+.+..+. .+++-+.. .+++.|-++.+. ...... ...+-..++..++....+..-+.-
T Consensus 200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~ 279 (494)
T 1bpo_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 279 (494)
T ss_dssp EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETT
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecC
Confidence 55444443221 23443433 378888888542 111110 112335577778888888889999
Q ss_pred CeEEEEECCCCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEecc
Q 016187 341 GKVRVWDSLSGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 341 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
|-|++||+.++.++..-.--...|..-+......-++.....|.|.--.+.
T Consensus 280 G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 280 GYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred ceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 999999999999998766556666555555555566666677766554443
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.05 E-value=0.023 Score=49.78 Aligned_cols=174 Identities=11% Similarity=0.097 Sum_probs=88.5
Q ss_pred EEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCC--------CcEEEEeCCCCceEEEEecCCCCEEEEEEc
Q 016187 89 GFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD--------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWH 158 (394)
Q Consensus 89 v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d--------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (394)
+..||..+.++... +......-.++.+ ++.+++.|+.+ ..+.+||+.+.+....-..+.......+..
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 146 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS 146 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE
Confidence 66788888776442 2111111112222 55666666632 458899998876543222111111111222
Q ss_pred CCCCEEEEecC-C-----CeEEEEeCCccceee--eecccCcCeEEEEECCCCCeEEEEeCCC-----cEEEEcCCCCce
Q 016187 159 PRGHIVLAGSE-D-----STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGSDDA-----TLRVWNPKSGEN 225 (394)
Q Consensus 159 ~~~~~l~~~s~-d-----~~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~ 225 (394)
.++++++.|+. + ..+.+||..+.+-.. .+........++.+ +++.++.|+.++ .+.+||+.+++
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~- 223 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK- 223 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE-
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe-
Confidence 45667777765 2 468889987654222 11111111122222 567777777654 57889988764
Q ss_pred EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCC--------------cEEEEECCCCc
Q 016187 226 IHVIRGHPYHTEGLTCLTISADSTLALSGSKDG--------------SVHMVNITTGK 269 (394)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg--------------~i~i~d~~~~~ 269 (394)
...+...+.......++.+ ++++++.|+.++ .+.+||+.+.+
T Consensus 224 W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 224 WAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 3333332222222223332 567777776532 35667776654
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.03 E-value=0.052 Score=49.11 Aligned_cols=146 Identities=16% Similarity=0.171 Sum_probs=92.0
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC----CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccc---------
Q 016187 116 SMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGP----GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAA--------- 182 (394)
Q Consensus 116 s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~--------- 182 (394)
..+|..++.+- ++.||.-++......+.+..+ ...+..+..+|+|.+|+..+ +..|.+-.+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 34555555543 466777776643333344333 33577899999999887764 4577777765211
Q ss_pred ---eeeeecc------cCcCeEEEEECCC---CCeEEEEeCCCcEEEEcCCCCce-EEEEc------CCCCcccCeEEEE
Q 016187 183 ---YLNMFSG------HGSSVTCGDFTPD---GKTICTGSDDATLRVWNPKSGEN-IHVIR------GHPYHTEGLTCLT 243 (394)
Q Consensus 183 ---~~~~~~~------h~~~v~~~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~-~~~~~------~~~~~~~~i~~~~ 243 (394)
..+.+.- ...+|..+.|+|- +..|++-..|+.||+||+..... ...++ +.......+.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 0112221 2467999999994 56899999999999999975321 11232 1112235688999
Q ss_pred EcCCCCEEEEEe--CCCcEEEE
Q 016187 244 ISADSTLALSGS--KDGSVHMV 263 (394)
Q Consensus 244 ~~~~~~~l~~g~--~dg~i~i~ 263 (394)
|++++-.|.+.+ ..|-|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999887666644 77777643
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.97 E-value=0.027 Score=49.19 Aligned_cols=185 Identities=15% Similarity=0.178 Sum_probs=97.0
Q ss_pred CCcEEEEecC----C-----CeEEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCC
Q 016187 76 DATLVATGGG----D-----DKGFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-----GLVQIWDPSSG 139 (394)
Q Consensus 76 ~~~~lasg~~----d-----~~v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d-----~~i~vwd~~~~ 139 (394)
++.+++.||. + ..+.++|..+.++... +......-.++.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 3456666665 2 4577888888776543 2211112222223 56666766643 46888998877
Q ss_pred ceEEEEecCC--CCEEEEEEcCCCCEEEEecCC-----CeEEEEeCCccceee--eecccCcCeEEEEECCCCCeEEEEe
Q 016187 140 NLKCTLEGPG--GGVEWVSWHPRGHIVLAGSED-----STVWMWNADRAAYLN--MFSGHGSSVTCGDFTPDGKTICTGS 210 (394)
Q Consensus 140 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~~s~d-----~~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~ 210 (394)
+....-..+. .....+.+ ++.+++.|+.+ ..+.+||+.+.+-.. .+........++.+ +++.++.|+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 6543221111 11122222 56677777654 458888887654221 11111111222223 566777776
Q ss_pred CC-----CcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc
Q 016187 211 DD-----ATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKD-----GSVHMVNITTGK 269 (394)
Q Consensus 211 ~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d-----g~i~i~d~~~~~ 269 (394)
.+ ..+.+||+.+++ ...+...+........+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETET-WTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCSSSBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCccceEEEEeCCCCc-EEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 64 468899988764 3333322222222222332 56777777654 346777776654
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.91 E-value=0.034 Score=45.56 Aligned_cols=172 Identities=12% Similarity=0.079 Sum_probs=96.3
Q ss_pred CCEEEEEeCCCcEEEEeCCCCc---e--EEEEecC--CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccC
Q 016187 119 GQLLASGGLDGLVQIWDPSSGN---L--KCTLEGP--GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHG 191 (394)
Q Consensus 119 g~~l~t~s~d~~i~vwd~~~~~---~--~~~~~~~--~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~ 191 (394)
..+|++...| ++++=....+. . ..+-.+. =..+..++|+|++.+.++ .++.++-.+..+.... .+.+-.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~-~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND-NWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC-CHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcc-cccccc
Confidence 4566677777 65554444443 1 1111122 236779999999886666 6777776665442111 011111
Q ss_pred cC--------eEEEEECCCCCeEEEEeCCCcEEEEcCCCCceE------EEEcCCCCcccCeEEEEEcCCCCEEEEEeCC
Q 016187 192 SS--------VTCGDFTPDGKTICTGSDDATLRVWNPKSGENI------HVIRGHPYHTEGLTCLTISADSTLALSGSKD 257 (394)
Q Consensus 192 ~~--------v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d 257 (394)
.. ..++.|.|+|.+.++ .||.|.-++..+...- ..+... .=..+..|.+.|+|.+.++. |
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~--gw~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSG--GWSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECS--SGGGEEEEEECTTSCEEEEE--T
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccC--CCCceEEEEECCCceEEEEe--C
Confidence 11 367889999988777 5699988886442211 111110 01347899999999988877 7
Q ss_pred CcEEEEECCCCc------EEEEe-ccCCCCEEEEEECCCCCeEEEEeCCCcE
Q 016187 258 GSVHMVNITTGK------VVSSL-VSHTDSIECIGFSRSSPWAATGSMDQKL 302 (394)
Q Consensus 258 g~i~i~d~~~~~------~~~~~-~~h~~~i~~v~~~~~~~~l~s~s~dg~i 302 (394)
+.+.-....++. ....+ ...-..-.-+.|.+++.+.+.. ++.+
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 776544333211 00111 1122233446688988877666 6643
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.86 E-value=0.077 Score=43.48 Aligned_cols=142 Identities=15% Similarity=0.147 Sum_probs=81.2
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCce------EEEEe--cCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCC
Q 016187 108 DSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL------KCTLE--GPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNAD 179 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~------~~~~~--~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~ 179 (394)
..++.++|+|+|.+.+. .++.+.--+..+... -..+- +-. ....+.|.|++.+.++ .||.|+-++..
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 46779999999987766 677777767654211 11111 111 2467899999998877 66999888763
Q ss_pred cccee-------eeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCc------eEEEEcCCCCcccCeEEEEEcC
Q 016187 180 RAAYL-------NMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGE------NIHVIRGHPYHTEGLTCLTISA 246 (394)
Q Consensus 180 ~~~~~-------~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~~~i~~~~~~~ 246 (394)
+.... +.-.+--..+..+.|.|+|.+-+.. |+.+.-+...++. ....+.....+ ..+.+.+.+
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~--~yr~l~f~~ 191 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWD--TFKFLFFSS 191 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGG--GEEEEEECT
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcc--eEEEEEECC
Confidence 32111 0001112467889999999877666 7776444333221 01111111111 234456777
Q ss_pred CCCEEEEEeCCCcE
Q 016187 247 DSTLALSGSKDGSV 260 (394)
Q Consensus 247 ~~~~l~~g~~dg~i 260 (394)
++.+.++. ++.+
T Consensus 192 ~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 192 VGTLFGVQ--GGKF 203 (236)
T ss_dssp TSCEEEEE--TTEE
T ss_pred CCcEEEEe--CCeE
Confidence 77766655 5533
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.83 E-value=0.24 Score=44.89 Aligned_cols=143 Identities=13% Similarity=0.126 Sum_probs=92.4
Q ss_pred CCCeEEEEeCCCcEEEEcCCCCceEEEEcCCC-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-----------
Q 016187 202 DGKTICTGSDDATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGK----------- 269 (394)
Q Consensus 202 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~----------- 269 (394)
+|..++.+- ++.||.-++..+..-+.++... ..-..+..+..+|+|.+++..+ +..|.|..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 444444433 3667766665443444444321 1122467799999999998875 4688888886321
Q ss_pred -EEEEecc------CCCCEEEEEECCC---CCeEEEEeCCCcEEEEeCCCCCccee--------c---cCCCCEEEEEEe
Q 016187 270 -VVSSLVS------HTDSIECIGFSRS---SPWAATGSMDQKLIIWDLQHSLPRST--------C---DHEDGVTCLMWL 328 (394)
Q Consensus 270 -~~~~~~~------h~~~i~~v~~~~~---~~~l~s~s~dg~i~iwd~~~~~~~~~--------~---~~~~~v~~~~~~ 328 (394)
..+.+.- ...+|..+.|+|- +..|++-..|++|++||+........ . .....|.+++|.
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg 188 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFS 188 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEEC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEc
Confidence 1222221 2467999999996 45799999999999999976321110 1 122568899999
Q ss_pred CCCCEEEEEe--CCCeEEEE
Q 016187 329 GTSKYVVTGC--VDGKVRVW 346 (394)
Q Consensus 329 ~~~~~l~sg~--~dg~i~iw 346 (394)
+++-.|...+ ..|.|+-.
T Consensus 189 ~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 189 KDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSSCEEEEECTTSCEEEEE
T ss_pred CCCcEEEEEecCCCCCEEEE
Confidence 9887777755 88998765
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.80 E-value=0.052 Score=48.46 Aligned_cols=93 Identities=18% Similarity=0.323 Sum_probs=47.2
Q ss_pred CCcEEEEecC-CCeEEEEEcCC--CeeeEe--ec-CcccCEEEEEEcCCCCEEEEEeC-C---------CcEEEEeCCCC
Q 016187 76 DATLVATGGG-DDKGFFWRINQ--GDWASE--IQ-GHKDSVSSLAFSMDGQLLASGGL-D---------GLVQIWDPSSG 139 (394)
Q Consensus 76 ~~~~lasg~~-d~~v~~w~~~~--~~~~~~--~~-~h~~~V~~v~~s~~g~~l~t~s~-d---------~~i~vwd~~~~ 139 (394)
++.+++.||. ...+..+|..+ .++... +. .....-.++.+ ++.+++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 3455555653 35677888763 444432 22 11111222222 5666666665 2 46889999887
Q ss_pred ceEEEEecC-CCCEEEEEEcCCCCEEEEecCC
Q 016187 140 NLKCTLEGP-GGGVEWVSWHPRGHIVLAGSED 170 (394)
Q Consensus 140 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~s~d 170 (394)
+....-... .......+...++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 654322111 1111111222567777888754
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.051 Score=48.05 Aligned_cols=193 Identities=15% Similarity=0.127 Sum_probs=101.7
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEecC-CCCEEEEEEc--C-CCCEEEEe-cCCCeEEEEeCCccceeeeecc----c
Q 016187 120 QLLASGGLDGLVQIWDPSSGNLKCTLEGP-GGGVEWVSWH--P-RGHIVLAG-SEDSTVWMWNADRAAYLNMFSG----H 190 (394)
Q Consensus 120 ~~l~t~s~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-s~d~~i~iw~~~~~~~~~~~~~----h 190 (394)
.+++.++.||.|.-.|..+|+.+-+++.. ..++....-. + ++..++.. +.||.++.++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46788999999999999999988887654 1122211100 1 22333343 6899999999877643322211 1
Q ss_pred CcCeEE-E--EE-C----CCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcc----cCeEEEEEc-----CCCCEEEE
Q 016187 191 GSSVTC-G--DF-T----PDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHT----EGLTCLTIS-----ADSTLALS 253 (394)
Q Consensus 191 ~~~v~~-~--~~-~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~----~~i~~~~~~-----~~~~~l~~ 253 (394)
..++.. . .+ . -.+..+++|+.+|.+...|+++|+.+..+....... ....|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 222221 0 00 0 145678999999999999999999888775321100 001111110 12345666
Q ss_pred EeCCCcEEEEECCCCcE----EEEeccCCCC--E-EEEEECCCCCeEEEEeCCCcEEEEeCCCCCcce
Q 016187 254 GSKDGSVHMVNITTGKV----VSSLVSHTDS--I-ECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRS 314 (394)
Q Consensus 254 g~~dg~i~i~d~~~~~~----~~~~~~h~~~--i-~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~ 314 (394)
+..+..+.+.+ ++|+. .......... + ..-..+.++.+ +.++.||.|..+|..+.....
T Consensus 171 g~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 66666666655 33421 1111111000 0 00001123455 446788888888876655444
No 327
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.70 E-value=0.25 Score=43.59 Aligned_cols=222 Identities=10% Similarity=0.070 Sum_probs=117.0
Q ss_pred CEEEEecCCCeEEEEeCCccceeeeeccc-CcCeEEEEE--CC-CCCeEEEE-eCCCcEEEEcCCCCceEEEEcCCC-Cc
Q 016187 162 HIVLAGSEDSTVWMWNADRAAYLNMFSGH-GSSVTCGDF--TP-DGKTICTG-SDDATLRVWNPKSGENIHVIRGHP-YH 235 (394)
Q Consensus 162 ~~l~~~s~d~~i~iw~~~~~~~~~~~~~h-~~~v~~~~~--~~-~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~-~~ 235 (394)
.+++.++.||.|+-+|..+++.+-.+... ..++....- .+ ++..++.. +.||.|..++..+|.....+.... ..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 36888899999999998888776555433 122222110 01 22333333 689999999988875443332110 01
Q ss_pred ccCeEE---EEE-c----CCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCC--C-----EEEEEEC-----CCCCeEEE
Q 016187 236 TEGLTC---LTI-S----ADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTD--S-----IECIGFS-----RSSPWAAT 295 (394)
Q Consensus 236 ~~~i~~---~~~-~----~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~--~-----i~~v~~~-----~~~~~l~s 295 (394)
..++.. ..+ . ..+..+++|+.+|++...|+.+|+.+-++..... . ..|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 111211 000 0 1456788999999999999999999988754211 0 1111110 11245555
Q ss_pred EeCCCcEEEEeCCCCCcceeccCCCCEEEEEE---------------eCCCCEEEEEeCCCeEEEEECCCCeEEE-Eeec
Q 016187 296 GSMDQKLIIWDLQHSLPRSTCDHEDGVTCLMW---------------LGTSKYVVTGCVDGKVRVWDSLSGDCVR-TFSG 359 (394)
Q Consensus 296 ~s~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~---------------~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~ 359 (394)
+..+..+.+.+ ++.. +... .--.| +.++.+ +.++.||.|..+|..+|+.+- +.+
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~------~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W~~~~- 240 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNV------TYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARWVSPT- 240 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCC------EEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEEECCC-
T ss_pred ecceEEEEEEC-CCCC-eEEE------ecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEEEeec-
Confidence 55555555544 2111 1100 00011 123455 457889999999988887764 221
Q ss_pred ccCcee--------------EEEEcc----------CCCEEEEEeCCCcEEEEeccCC
Q 016187 360 HRDAIQ--------------AISVSA----------HQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 360 h~~~v~--------------~l~~~~----------~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
-..+|. -+.-+| ++..++-.+.+|.+.-+....+
T Consensus 241 l~sPv~~~~dv~~~~~~g~~v~~~~P~~~~~~~~~~~~~v~v~~t~~G~~~Als~~~y 298 (339)
T 2be1_A 241 FPGIIVGLFDVFNDLRTNENILVPHPFNPGDHESISSNKVYLDQTSNLSWFALSSQNF 298 (339)
T ss_dssp CSSCEEEEEEEEEETTTTEEEEEECCCCC--------CCEEEEECTTCCEEEEETTTC
T ss_pred CCCCeEEEEEEEEecCCCCEEEecCCCcccccccccCCeEEEEECCCCcEEEecCCCC
Confidence 111211 111223 3445554677898888887654
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.69 E-value=0.087 Score=46.14 Aligned_cols=174 Identities=14% Similarity=0.201 Sum_probs=87.3
Q ss_pred EEEEEcCCCeeeEe--ecCcccCEEEEEEcCCCCEEEEEeCC-------CcEEEEeCCCCceEEEEecCCCCEEEEEEcC
Q 016187 89 GFFWRINQGDWASE--IQGHKDSVSSLAFSMDGQLLASGGLD-------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHP 159 (394)
Q Consensus 89 v~~w~~~~~~~~~~--~~~h~~~V~~v~~s~~g~~l~t~s~d-------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (394)
+..+|..+.++... +......-.++.+ ++.+++.|+.+ ..+.+||+.+.+....-..+.......+...
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 157 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH 157 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE
Confidence 67788887776542 2211111122222 56677777754 2577889888766543221111111111124
Q ss_pred CCCEEEEecC------CCeEEEEeCCccceeee--ecccCcCeEEEEECCCCCeEEEEeCC-----CcEEEEcCCCCceE
Q 016187 160 RGHIVLAGSE------DSTVWMWNADRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSDD-----ATLRVWNPKSGENI 226 (394)
Q Consensus 160 ~~~~l~~~s~------d~~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~ 226 (394)
++++++.|+. -..+.+||..+.+-... +........++.+ +++.++.|+.+ ..+.+||+.+++ .
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W 234 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK-W 234 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC-E
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe-E
Confidence 5667777764 24588999876543221 1111111122222 56677777643 346788987764 3
Q ss_pred EEEcCCCCcccCeEEEEEcCCCCEEEEEeCC--------------CcEEEEECCCCc
Q 016187 227 HVIRGHPYHTEGLTCLTISADSTLALSGSKD--------------GSVHMVNITTGK 269 (394)
Q Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~d--------------g~i~i~d~~~~~ 269 (394)
..+...+........+. .++++++.|+.+ ..+.+||+.+.+
T Consensus 235 ~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 235 EVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 33332222222222222 246677777653 346677776654
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.68 E-value=0.13 Score=50.49 Aligned_cols=195 Identities=14% Similarity=0.183 Sum_probs=105.0
Q ss_pred CCcEEEEecCC----CeEEEEEcCCCeeeEee-c-------CcccCEEEEEEcCCCCEEEEEeCC------CcEEEEeCC
Q 016187 76 DATLVATGGGD----DKGFFWRINQGDWASEI-Q-------GHKDSVSSLAFSMDGQLLASGGLD------GLVQIWDPS 137 (394)
Q Consensus 76 ~~~~lasg~~d----~~v~~w~~~~~~~~~~~-~-------~h~~~V~~v~~s~~g~~l~t~s~d------~~i~vwd~~ 137 (394)
++.+++.||.+ ..+.++|..+.++...- . .....-.++.+..++.+++.|+.+ ..+.+||+.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 45566667643 45778888887765433 1 111122233333267777777754 357889988
Q ss_pred CCceEEEEecCCCCE-EEEEEcCCCCEEEEecCCC--eEEEEeCCccceeee-----ecccCcCeEEEEECCC-CCeEEE
Q 016187 138 SGNLKCTLEGPGGGV-EWVSWHPRGHIVLAGSEDS--TVWMWNADRAAYLNM-----FSGHGSSVTCGDFTPD-GKTICT 208 (394)
Q Consensus 138 ~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~s~d~--~i~iw~~~~~~~~~~-----~~~h~~~v~~~~~~~~-~~~l~s 208 (394)
+......-..+.... ..++...++++++.|+.++ .+.+||..+..-... +........++.+..+ ++.++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 876543211111111 1222324778888887654 689999876543221 1111111122444544 667777
Q ss_pred EeC--C-----CcEEEEcCCCCce-----EEEEcCCC-CcccCeEEEEEcCCCCEEEEEeC--------CCcEEEEECCC
Q 016187 209 GSD--D-----ATLRVWNPKSGEN-----IHVIRGHP-YHTEGLTCLTISADSTLALSGSK--------DGSVHMVNITT 267 (394)
Q Consensus 209 ~~~--d-----g~i~vwd~~~~~~-----~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g~~--------dg~i~i~d~~~ 267 (394)
|+. + ..+.+||+.+.+- ...+...+ .......++. ..++++++.|+. ...+.+||+.+
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 765 2 3588999887761 23332211 1112222222 333677777774 34688999987
Q ss_pred CcEE
Q 016187 268 GKVV 271 (394)
Q Consensus 268 ~~~~ 271 (394)
.+-.
T Consensus 636 ~~W~ 639 (695)
T 2zwa_A 636 ETLT 639 (695)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7543
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.67 E-value=0.32 Score=43.34 Aligned_cols=225 Identities=11% Similarity=0.067 Sum_probs=122.6
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCe-eeEeec---CcccCEEEEEEcCC---CCEE-EEEeC---C----
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGD-WASEIQ---GHKDSVSSLAFSMD---GQLL-ASGGL---D---- 128 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~-~~~~~~---~h~~~V~~v~~s~~---g~~l-~t~s~---d---- 128 (394)
-..-..++|.|+ ++++++ ..++.|++++ ..++ .+..+. .-......|+|+|+ +..| ++-+. +
T Consensus 28 l~~P~~ia~~pd-G~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGG-GRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEET-TEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCC-CeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 345688999995 556655 4458888887 3444 222221 12356889999997 4444 44332 3
Q ss_pred CcEEEEeCCCC--ce-----E-EEEec-CCCCEEEEEEcCCCCEEEEecC-------------CCeEEEEeCCcc-----
Q 016187 129 GLVQIWDPSSG--NL-----K-CTLEG-PGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADRA----- 181 (394)
Q Consensus 129 ~~i~vwd~~~~--~~-----~-~~~~~-~~~~v~~~~~~~~~~~l~~~s~-------------d~~i~iw~~~~~----- 181 (394)
..|..|+.... .. + ..+.. .......++|.|++.++++.+. .+.|..++....
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 56777776543 11 1 11221 1112356899999987776432 245666665432
Q ss_pred ---ceeeeecccCcCeEEEEECC-CCCeEEEEeCCC---cEEEEcCCCCc------------------eEEEEcCCCCcc
Q 016187 182 ---AYLNMFSGHGSSVTCGDFTP-DGKTICTGSDDA---TLRVWNPKSGE------------------NIHVIRGHPYHT 236 (394)
Q Consensus 182 ---~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg---~i~vwd~~~~~------------------~~~~~~~~~~~~ 236 (394)
.......++.. ...++|+| +|+++++-.... .|.+.. .+. .+..+. . ..
T Consensus 185 pf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~--~-~~ 258 (354)
T 3a9g_A 185 PFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG--S-ET 258 (354)
T ss_dssp SSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT--T-CC
T ss_pred CCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC--C-CC
Confidence 01111123433 45789999 565544432221 133322 111 011110 0 12
Q ss_pred cCeEEEEEc-------CCCCEEEEEeCCCcEEEEECCCC-cEE--EEec-cCCCCEEEEEECCCCCeEEEEe
Q 016187 237 EGLTCLTIS-------ADSTLALSGSKDGSVHMVNITTG-KVV--SSLV-SHTDSIECIGFSRSSPWAATGS 297 (394)
Q Consensus 237 ~~i~~~~~~-------~~~~~l~~g~~dg~i~i~d~~~~-~~~--~~~~-~h~~~i~~v~~~~~~~~l~s~s 297 (394)
.....+.+. .++.++++.-..+.|..+++... +.. ..+. .....+..+++.|++.+.++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 246667773 46777777777788988888753 332 2332 2235688999999987666553
No 331
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.62 E-value=0.86 Score=47.49 Aligned_cols=244 Identities=15% Similarity=0.114 Sum_probs=124.7
Q ss_pred cEEEEeCCCCceEEEEecCC-CCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeee-ecccCcCeEEEEECCC-----
Q 016187 130 LVQIWDPSSGNLKCTLEGPG-GGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNM-FSGHGSSVTCGDFTPD----- 202 (394)
Q Consensus 130 ~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~----- 202 (394)
.|++.+...+..+..+..+. ..|...+.+. .+++.++ .+.+.++.+..+..... -..-...|.|+++.|.
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 45666655544555555443 3566665543 3555554 57787777654322111 0112567999999863
Q ss_pred -CCeEEEEeC-CCcEEEEcCCCCceEEEEcCCC-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCcEEEE--ec
Q 016187 203 -GKTICTGSD-DATLRVWNPKSGENIHVIRGHP-YHTEGLTCLTISADSTLALSGSKDGSVHMVNI--TTGKVVSS--LV 275 (394)
Q Consensus 203 -~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~--~~~~~~~~--~~ 275 (394)
+++++.|.. |++|+|+.+.+.+.+....... .....+.-+.+ ....++..|-.||.+..+.+ .+|.+... ..
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~ 648 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT 648 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE
Confidence 368999996 9999999998766554433211 11112222233 23467889999998865544 45544322 11
Q ss_pred cCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCcceeccCCCCEE-EEEEeCCC--CEEEEEeCCCeEEEEECCCCe
Q 016187 276 SHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLPRSTCDHEDGVT-CLMWLGTS--KYVVTGCVDGKVRVWDSLSGD 352 (394)
Q Consensus 276 ~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~--~~l~sg~~dg~i~iwd~~~~~ 352 (394)
-...++.-..+...+..-+-+..+....+|.-+.......... ..+. ...|+... .-++ +..++.++|..+..-.
T Consensus 649 LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~-~~v~~~~~F~se~~~~g~v-~~~~~~LrI~~i~~~~ 726 (1158)
T 3ei3_A 649 LGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNL-KEVNYMCPLNSDGYPDSLA-LANNSTLTIGTIDEIQ 726 (1158)
T ss_dssp CCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSS-SCCCEEEEECCSSSTTEEE-EECSSCEEEEEECCSS
T ss_pred cCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccCh-HHhceEeccCcccCCCcEE-EEcCCceEEEEecccC
Confidence 1233443333333333222222233344443322211111111 1232 33343321 2333 3345568888764322
Q ss_pred --EEEEeecccCceeEEEEccCCCEEEEEe
Q 016187 353 --CVRTFSGHRDAIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 353 --~~~~~~~h~~~v~~l~~~~~~~~l~s~s 380 (394)
.++++.- +..+..++++|+.+.++.+.
T Consensus 727 ~~~~~~ipL-~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 727 KLHIRTVPL-YESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp SEEEEEEEC-SSEEEEEEEEGGGTEEEEEE
T ss_pred CeeEEEEeC-CCCceEEEEcCCCCEEEEEE
Confidence 2333432 45678999999888765544
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.31 E-value=0.17 Score=45.03 Aligned_cols=191 Identities=13% Similarity=0.138 Sum_probs=93.6
Q ss_pred CcEEEEecC-C---------CeEEEEEcCCCeeeEeecCc---ccCEEEEEEcCCCCEEEEEeCC---------------
Q 016187 77 ATLVATGGG-D---------DKGFFWRINQGDWASEIQGH---KDSVSSLAFSMDGQLLASGGLD--------------- 128 (394)
Q Consensus 77 ~~~lasg~~-d---------~~v~~w~~~~~~~~~~~~~h---~~~V~~v~~s~~g~~l~t~s~d--------------- 128 (394)
+.+++.||. + ..+.+||..+.++...-... ...-.++. .++++++.|+.+
T Consensus 66 ~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 66 GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcC
Confidence 456666665 2 45788898888766532211 11122222 567777788754
Q ss_pred ------------------------CcEEEEeCCCCceEEEEecCCC-CE-EEEEEcCCCCEEEEecC------CCeEEEE
Q 016187 129 ------------------------GLVQIWDPSSGNLKCTLEGPGG-GV-EWVSWHPRGHIVLAGSE------DSTVWMW 176 (394)
Q Consensus 129 ------------------------~~i~vwd~~~~~~~~~~~~~~~-~v-~~~~~~~~~~~l~~~s~------d~~i~iw 176 (394)
..+.+||+.+.+....-..+.. .. ..+.. -++++++.|+. ...+.+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~ 222 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFEL 222 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEE
Confidence 4788999988876543322211 11 12222 25566677653 3456777
Q ss_pred eC--Ccccee--eeecccCcCeEEEEECCCCCeEEEEeCC----------------------CcEEEEcCCCCceEEEEc
Q 016187 177 NA--DRAAYL--NMFSGHGSSVTCGDFTPDGKTICTGSDD----------------------ATLRVWNPKSGENIHVIR 230 (394)
Q Consensus 177 ~~--~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d----------------------g~i~vwd~~~~~~~~~~~ 230 (394)
++ .+..-. ..+..........+...+++.++.|+.+ ..+.+||+.+.+= ..+.
T Consensus 223 d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W-~~~~ 301 (357)
T 2uvk_A 223 DFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW-DKSG 301 (357)
T ss_dssp ECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C-EEEE
T ss_pred EecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCce-eeCC
Confidence 76 333211 1111111111111222356677777632 2477889876542 2222
Q ss_pred CCCCcccCeEEEEEcCCCCEEEEEeCCC------cEEEEECCCCcEEEE
Q 016187 231 GHPYHTEGLTCLTISADSTLALSGSKDG------SVHMVNITTGKVVSS 273 (394)
Q Consensus 231 ~~~~~~~~i~~~~~~~~~~~l~~g~~dg------~i~i~d~~~~~~~~~ 273 (394)
..+.....-.++ ..++++++.|+.++ .+.++++.+++.+..
T Consensus 302 ~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 302 ELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp ECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 222222222222 24677888887543 355567777765544
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.16 E-value=0.61 Score=48.94 Aligned_cols=220 Identities=13% Similarity=0.141 Sum_probs=123.8
Q ss_pred CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEE
Q 016187 129 GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICT 208 (394)
Q Consensus 129 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 208 (394)
.+|.|-|+.++.....-+ -.-.+.-.||..+.++.-. ..++.++|+++...++.+.-.. +|.--.|-... .|+.
T Consensus 48 ~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~-~l~l 121 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TVAL 121 (1630)
T ss_pred ceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCC-eeEE
Confidence 367788887765432111 1112345688888776654 6899999999887777655444 34444554333 3333
Q ss_pred EeCCCcEEEEcCCCCc-eEEEEcCCC-CcccCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCcEEEEeccCCC
Q 016187 209 GSDDATLRVWNPKSGE-NIHVIRGHP-YHTEGLTCLTISADSTLALSGS-------KDGSVHMVNITTGKVVSSLVSHTD 279 (394)
Q Consensus 209 ~~~dg~i~vwd~~~~~-~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~g~-------~dg~i~i~d~~~~~~~~~~~~h~~ 279 (394)
.+ +..|..|++.... +.+.+..++ .....|..-..+++.++++..+ -.|.+.+|+...+ .-+.+.+|..
T Consensus 122 VT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~ 199 (1630)
T 1xi4_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAA 199 (1630)
T ss_pred Ec-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHh
Confidence 33 3579999996432 222222221 1233466667788888766432 3477888887654 2333455544
Q ss_pred CEEEEEEC--CC-CCeEEEEe---CCCcEEEEeCCCC---Ccc---ee----cc---CCCCEEEEEEeCCCCEEEEEeCC
Q 016187 280 SIECIGFS--RS-SPWAATGS---MDQKLIIWDLQHS---LPR---ST----CD---HEDGVTCLMWLGTSKYVVTGCVD 340 (394)
Q Consensus 280 ~i~~v~~~--~~-~~~l~s~s---~dg~i~iwd~~~~---~~~---~~----~~---~~~~v~~~~~~~~~~~l~sg~~d 340 (394)
.-..+... +. ...++.+. ..+++.|-++.+. .+. .. .. ..+-..++..++....+..-+.-
T Consensus 200 ~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~ 279 (1630)
T 1xi4_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY 279 (1630)
T ss_pred hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecC
Confidence 33333222 11 12222222 2368888887432 110 00 00 11223455667777788888899
Q ss_pred CeEEEEECCCCeEEEE
Q 016187 341 GKVRVWDSLSGDCVRT 356 (394)
Q Consensus 341 g~i~iwd~~~~~~~~~ 356 (394)
|-|.++|+.|+.++..
T Consensus 280 G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 280 GYIHLYDLETGTCIYM 295 (1630)
T ss_pred ceEEEEecccchhhhh
Confidence 9999999999998754
No 334
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.89 E-value=0.8 Score=39.98 Aligned_cols=231 Identities=12% Similarity=0.104 Sum_probs=138.2
Q ss_pred EcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEecC--
Q 016187 72 CSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSG-NLKCTLEGP-- 148 (394)
Q Consensus 72 ~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~-~~~~~~~~~-- 148 (394)
.+|. ..++|--. ..+++++|+++.+.+....- .+.|.-=.|-.+. .|+-.. +..|.-|++... .....+..|
T Consensus 74 MnP~-~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 74 MNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp ECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGG
T ss_pred eCCC-ccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchh
Confidence 4775 45666554 58899999999876665553 3566666775543 444443 457999998642 344444433
Q ss_pred --CCCEEEEEEcCCCCEEEE-ec------CCCeEEEEeCCccceeeeecccCcCeEEEEECCC---CCeEEEEeC---CC
Q 016187 149 --GGGVEWVSWHPRGHIVLA-GS------EDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPD---GKTICTGSD---DA 213 (394)
Q Consensus 149 --~~~v~~~~~~~~~~~l~~-~s------~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~---dg 213 (394)
...|-.-+-+++.+.++. |- -.|.+.+|+.+++. .+.+.||......+.+.-+ .+.++.+.. .+
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~ 227 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 227 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCc
Confidence 234555556777775543 32 23678899887654 4567788765433322211 123333322 25
Q ss_pred cEEEEcCCCC---c-----eEEEE-cCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEE
Q 016187 214 TLRVWNPKSG---E-----NIHVI-RGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECI 284 (394)
Q Consensus 214 ~i~vwd~~~~---~-----~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v 284 (394)
.+++-++... . ....+ -......+-..++.+++.-..++.-+.-|.|+++|+.++.++..-+--.++|..-
T Consensus 228 kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 228 KLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVT 307 (365)
T ss_dssp EEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEe
Confidence 7888887432 1 11111 1122234456778888888888888999999999999999987765555666555
Q ss_pred EECCCCCeEEEEeCCCcEEEEeCC
Q 016187 285 GFSRSSPWAATGSMDQKLIIWDLQ 308 (394)
Q Consensus 285 ~~~~~~~~l~s~s~dg~i~iwd~~ 308 (394)
+......=++.....|.|.-..+.
T Consensus 308 a~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 308 APHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp EEEGGGTEEEEEETTCEEEEEEEC
T ss_pred cccCCCCcEEEEcCCCEEEEEEEC
Confidence 544433334444566666555444
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.81 E-value=1.2 Score=46.74 Aligned_cols=216 Identities=14% Similarity=0.198 Sum_probs=121.9
Q ss_pred CCCeEEEEEcCCCeeeE--eecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC
Q 016187 85 GDDKGFFWRINQGDWAS--EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH 162 (394)
Q Consensus 85 ~d~~v~~w~~~~~~~~~--~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (394)
....|.|-|+..+..+. .+.+ -+.-.+|..+.+|.=+ ..++.|+|+.+...+..+.-+.. |..-+|-....
T Consensus 46 ~~~~vvIidl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~-VvfWkWis~~~ 118 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLNT 118 (1630)
T ss_pred CCceEEEEECCCCCCcccccccc-----hhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC-ceEEEecCCCe
Confidence 33467777776644321 1111 1233567776666554 67899999988877766655444 44446654443
Q ss_pred EEEEecCCCeEEEEeCCc-cceeeeeccc----CcCeEEEEECCCCCeEEEEe-------CCCcEEEEcCCCCceEEEEc
Q 016187 163 IVLAGSEDSTVWMWNADR-AAYLNMFSGH----GSSVTCGDFTPDGKTICTGS-------DDATLRVWNPKSGENIHVIR 230 (394)
Q Consensus 163 ~l~~~s~d~~i~iw~~~~-~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~-------~dg~i~vwd~~~~~~~~~~~ 230 (394)
+-++ .+..|+.|++.. ..+.+.+.-| ...|..-..+++.++++..+ -.|.+.+|.+..+.. +.+.
T Consensus 119 l~lV--T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~ie 195 (1630)
T 1xi4_A 119 VALV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIE 195 (1630)
T ss_pred eEEE--cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhh
Confidence 3222 356899999964 3444555555 44566667788888876443 357888998765432 2333
Q ss_pred CCCCcccCeEEEEE--cCC-CCEEEEEe---CCCcEEEEECCCC---c-EE-----EEecc---CCCCEEEEEECCCCCe
Q 016187 231 GHPYHTEGLTCLTI--SAD-STLALSGS---KDGSVHMVNITTG---K-VV-----SSLVS---HTDSIECIGFSRSSPW 292 (394)
Q Consensus 231 ~~~~~~~~i~~~~~--~~~-~~~l~~g~---~dg~i~i~d~~~~---~-~~-----~~~~~---h~~~i~~v~~~~~~~~ 292 (394)
+|.. ....+.. .+. ..++..+. ..++++|.++... . .. .-+.. -.+-.-++..++....
T Consensus 196 gha~---~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~ 272 (1630)
T 1xi4_A 196 GHAA---SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (1630)
T ss_pred HhHh---hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE
Confidence 3211 1111111 011 11222111 1368999988542 1 11 00111 1233446777888788
Q ss_pred EEEEeCCCcEEEEeCCCCCcc
Q 016187 293 AATGSMDQKLIIWDLQHSLPR 313 (394)
Q Consensus 293 l~s~s~dg~i~iwd~~~~~~~ 313 (394)
+...+.-|.+.+||+.+..+.
T Consensus 273 iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred EEEEecCceEEEEecccchhh
Confidence 888889999999999876543
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.55 E-value=0.55 Score=46.13 Aligned_cols=191 Identities=11% Similarity=0.129 Sum_probs=100.3
Q ss_pred CCCCEEEEEeCC----CcEEEEeCCCCceEEEE-e-----cCCCC-EEEEEEcC-CCCEEEEecCC------CeEEEEeC
Q 016187 117 MDGQLLASGGLD----GLVQIWDPSSGNLKCTL-E-----GPGGG-VEWVSWHP-RGHIVLAGSED------STVWMWNA 178 (394)
Q Consensus 117 ~~g~~l~t~s~d----~~i~vwd~~~~~~~~~~-~-----~~~~~-v~~~~~~~-~~~~l~~~s~d------~~i~iw~~ 178 (394)
.++..++.|+.+ ..+.+||+.+++....- . .+... -.+++..+ ++++++.|+.+ +.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456666666643 46788888887765433 2 11111 12233333 67777777643 35788888
Q ss_pred Cccceeee--ecccCcCeEEEEECCCCCeEEEEeCCC--cEEEEcCCCCceEEEEcC---CCCcccCeEEEEEcCC-CCE
Q 016187 179 DRAAYLNM--FSGHGSSVTCGDFTPDGKTICTGSDDA--TLRVWNPKSGENIHVIRG---HPYHTEGLTCLTISAD-STL 250 (394)
Q Consensus 179 ~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~---~~~~~~~i~~~~~~~~-~~~ 250 (394)
.+..-... +......- ++....+++.++.|+.++ .+.+||+.+++ ...+.. .+.......++.+..+ +++
T Consensus 476 ~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 76432221 11111111 223334788888887655 68999998764 333321 1111122233455554 677
Q ss_pred EEEEeC--C-----CcEEEEECCCCcE-----EEEecc----CCCCEEEEEECCCCCeEEEEeC--------CCcEEEEe
Q 016187 251 ALSGSK--D-----GSVHMVNITTGKV-----VSSLVS----HTDSIECIGFSRSSPWAATGSM--------DQKLIIWD 306 (394)
Q Consensus 251 l~~g~~--d-----g~i~i~d~~~~~~-----~~~~~~----h~~~i~~v~~~~~~~~l~s~s~--------dg~i~iwd 306 (394)
++.|+. + ..+..||+.+.+- ...+.. ......++ ...++.+++.|+. ...+.+||
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 777765 2 3588999887761 122211 11112222 2232566666663 34588888
Q ss_pred CCCC
Q 016187 307 LQHS 310 (394)
Q Consensus 307 ~~~~ 310 (394)
+.+.
T Consensus 633 ~~t~ 636 (695)
T 2zwa_A 633 PLSE 636 (695)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 8654
No 337
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.53 E-value=1.2 Score=39.51 Aligned_cols=230 Identities=12% Similarity=0.156 Sum_probs=119.7
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEe---e----cCcccCEEEEEEcCC----CCEEEEEeC-----
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE---I----QGHKDSVSSLAFSMD----GQLLASGGL----- 127 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~---~----~~h~~~V~~v~~s~~----g~~l~t~s~----- 127 (394)
-..-..++|.|++..++++- ..+.|++++.. +..... + .........|+|+|+ +.+.++-+.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e-~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITL-RGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEE-TTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCcEEEEEcCCCCEEEEEe-CCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 34568999999654266553 56888888743 332211 1 112345789999996 444444332
Q ss_pred --CCcEEEEeCCCC--ce---EEEEec-C-----CCCEEEEEEcCCCCEEEEecC-------------CCeEEEEeCCcc
Q 016187 128 --DGLVQIWDPSSG--NL---KCTLEG-P-----GGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNADRA 181 (394)
Q Consensus 128 --d~~i~vwd~~~~--~~---~~~~~~-~-----~~~v~~~~~~~~~~~l~~~s~-------------d~~i~iw~~~~~ 181 (394)
...|..++...+ .. ...+.. + ...-..+.|.|++.++++.+. .+.|.-++....
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 234666665432 11 111211 1 112346999999976666433 246766776532
Q ss_pred c------------eeeee-cccCcCeEEEEECC-CCCeEEEEe-CCCcEEEEcCCCCceE----E---------EE----
Q 016187 182 A------------YLNMF-SGHGSSVTCGDFTP-DGKTICTGS-DDATLRVWNPKSGENI----H---------VI---- 229 (394)
Q Consensus 182 ~------------~~~~~-~~h~~~v~~~~~~~-~~~~l~s~~-~dg~i~vwd~~~~~~~----~---------~~---- 229 (394)
. ....+ .++. ....++|.| +|++.++-. .++.=.|.-+..+... . .+
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~ 253 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAK 253 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCC
T ss_pred CCCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCccc
Confidence 1 11112 2343 356789999 554443321 1221222222222110 0 00
Q ss_pred ----cC--CC----CcccCeEEEEEcC-------CCCEEEEEeCCCcEEEEECCCCcEEEE--ec-cCCCCEEEEEECCC
Q 016187 230 ----RG--HP----YHTEGLTCLTISA-------DSTLALSGSKDGSVHMVNITTGKVVSS--LV-SHTDSIECIGFSRS 289 (394)
Q Consensus 230 ----~~--~~----~~~~~i~~~~~~~-------~~~~l~~g~~dg~i~i~d~~~~~~~~~--~~-~h~~~i~~v~~~~~ 289 (394)
.. .+ .+......+.+.. ++.++++.-..+.|..+++..++.+.. +. .....+..+++.|+
T Consensus 254 ~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 254 GEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp BSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred CCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 00 00 0112455666653 467777777788888888876654432 22 22347889999999
Q ss_pred CCeEEEE
Q 016187 290 SPWAATG 296 (394)
Q Consensus 290 ~~~l~s~ 296 (394)
+.+.++.
T Consensus 334 G~lyv~t 340 (353)
T 2g8s_A 334 GYLYVLT 340 (353)
T ss_dssp SCEEEEE
T ss_pred CcEEEEE
Confidence 9866543
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.47 E-value=2.2 Score=42.18 Aligned_cols=309 Identities=14% Similarity=0.086 Sum_probs=174.3
Q ss_pred cEEEEEEcCCCCc-EEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEE
Q 016187 66 EVYSVACSPTDAT-LVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCT 144 (394)
Q Consensus 66 ~v~~~~~~p~~~~-~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~ 144 (394)
.|.++...+.+.. .++|. +-+..++..++++.....-....|.++...++|.+.+ |+.+ -+.+++..+++....
T Consensus 192 ~i~~i~~d~~~~~lWigt~---~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE---GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHI 266 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE---EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEE
T ss_pred eeEEEEEECCCCEEEEEEC---CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEE
Confidence 4778877664443 44442 3577788777654332111234688999888887665 4444 488888876654322
Q ss_pred Eec-------CCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeec-------ccCcCeEEEEECCCCCeEEEEe
Q 016187 145 LEG-------PGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS-------GHGSSVTCGDFTPDGKTICTGS 210 (394)
Q Consensus 145 ~~~-------~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~~ 210 (394)
... ....|.++....++.+.+. +..| +.++.... . ...+. .....|.++.-..+|.+ ..|+
T Consensus 267 ~~~~~~~~~l~~~~i~~i~~D~~g~lWiG-T~~G-l~~~~~~~-~-~~~~~~~~~~~~~~~~~v~~i~~D~~g~l-WiGt 341 (758)
T 3ott_A 267 IHDSRNIQSLTNNIIWNIFADQEHNIWLG-TDYG-ISLSRYNS-A-LQFIPISQITGTGDGNQFYSLFRDSKGFY-WFGG 341 (758)
T ss_dssp CCCTTCTTSCSCSCEEEEEECTTCCEEEE-ESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCE-EEEE
T ss_pred EcCCCCcCcCCcCeEEEEEEcCCCCEEEE-eCCc-ccccccCC-c-eeEEecccCCCCCCCceEEEEEEcCCCCE-EEee
Confidence 111 2235888877777765543 3445 44443221 1 11110 12345777777766664 4445
Q ss_pred CCCcEEEEcCCCCc--eEEEEcC----CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEe--cc----CC
Q 016187 211 DDATLRVWNPKSGE--NIHVIRG----HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSL--VS----HT 278 (394)
Q Consensus 211 ~dg~i~vwd~~~~~--~~~~~~~----~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~--~~----h~ 278 (394)
.+| +..++..+++ ....+.. .......|.++...+++.+.+ |+ ++-|..+|..+++...-. .. ..
T Consensus 342 ~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~ 418 (758)
T 3ott_A 342 ANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNT 418 (758)
T ss_dssp TTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBS
T ss_pred CCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCC
Confidence 555 6666665432 1222221 112234588888888887665 44 457999998887543211 11 23
Q ss_pred CCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC-----Ccc---ee----c-cCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Q 016187 279 DSIECIGFSRSSPWAATGSMDQKLIIWDLQHS-----LPR---ST----C-DHEDGVTCLMWLGTSKYVVTGCVDGKVRV 345 (394)
Q Consensus 279 ~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~-----~~~---~~----~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~i 345 (394)
..|.++...+++.+.+ |+..+-|.++|..+. ... .. . .....|.++...+++.+.+.++..+-|..
T Consensus 419 ~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~ 497 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDK 497 (758)
T ss_dssp SSEEEEEECTTSEEEE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEE
T ss_pred ceEEEEEEcCCCCEEE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEE
Confidence 4588888877776444 555555777774320 000 00 0 11235888888888887764444455888
Q ss_pred EECCCCeEEEEee-c--ccCceeEEEEccCCCEEEEEeCCCcEEEEec
Q 016187 346 WDSLSGDCVRTFS-G--HRDAIQAISVSAHQDFLVSVSLDGTARVFEI 390 (394)
Q Consensus 346 wd~~~~~~~~~~~-~--h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~ 390 (394)
+|..+++...... + ....+.++....++.+.+. +..| +..|+.
T Consensus 498 ~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~ 543 (758)
T 3ott_A 498 INPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINP 543 (758)
T ss_dssp EETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC
T ss_pred EeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEec
Confidence 8987776543221 1 1245778888888877654 4455 555654
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.33 E-value=1.7 Score=40.05 Aligned_cols=106 Identities=15% Similarity=0.100 Sum_probs=61.3
Q ss_pred cCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEE--EcCC---CCcccCeEEEEEcCC----CCEEEEEeC------
Q 016187 192 SSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHV--IRGH---PYHTEGLTCLTISAD----STLALSGSK------ 256 (394)
Q Consensus 192 ~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~----~~~l~~g~~------ 256 (394)
.....++|.|+|+++++-...+.|++++..+++.... +... +....++..++++|+ +.++++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3567899999998777655445798888655543222 2211 012456788999995 444444332
Q ss_pred ------CCcEEEEECCCC-------cEEE-Eecc-CCCCEEEEEECCCCCeEEEEe
Q 016187 257 ------DGSVHMVNITTG-------KVVS-SLVS-HTDSIECIGFSRSSPWAATGS 297 (394)
Q Consensus 257 ------dg~i~i~d~~~~-------~~~~-~~~~-h~~~i~~v~~~~~~~~l~s~s 297 (394)
...|.-+++..+ +.+. .+.. .......|+|.|++.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554321 1122 1221 123478899999998766654
No 340
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.27 E-value=1.2 Score=38.06 Aligned_cols=242 Identities=15% Similarity=0.134 Sum_probs=118.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeec
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFS 188 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~ 188 (394)
.|..|+..... .++. . |+.|..|-......+..-......|..++..... .++. . |+.++.|-....-.+-...
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 56777665432 2333 4 8999999754322111101112345556554333 2333 4 8999999754321111111
Q ss_pred ccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 016187 189 GHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTG 268 (394)
Q Consensus 189 ~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~ 268 (394)
.-...|..++.... ..+.-. ||.|..|=....-++. ........|..++....-.+++ . ||.+..|-....
T Consensus 99 ~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 99 EARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYF 169 (282)
T ss_dssp GGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTT
T ss_pred ccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCC
Confidence 11235666655433 333334 8999999654321110 0001223466665544333332 3 688888875432
Q ss_pred cEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCC-CcceeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Q 016187 269 KVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHS-LPRSTCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWD 347 (394)
Q Consensus 269 ~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd 347 (394)
..+..-..-...|..++.......++ .||.+..|-.... +..........|..++.......+++ ||+|+.|-
T Consensus 170 gqlg~p~~~~~~v~~i~~G~~hs~al---~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG 243 (282)
T 3qhy_B 170 GQTTVPAEAQSGVDDVAGGIFHSLAL---KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAWG 243 (282)
T ss_dssp STTSCCGGGGSSEEEEEECSSEEEEE---ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEES
T ss_pred CCCCCceecCCCeEEEEecCCEEEEE---ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEec
Confidence 11111011134577777665443333 4999999975432 11111111234556655444333333 99999996
Q ss_pred CCCCeEEEEeecccCceeEEEEccCCCE
Q 016187 348 SLSGDCVRTFSGHRDAIQAISVSAHQDF 375 (394)
Q Consensus 348 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 375 (394)
.....++.. ...|.+++......+
T Consensus 244 ~n~~gq~~v----~~~v~~iaaG~~h~~ 267 (282)
T 3qhy_B 244 SSRTAPSSV----QSGVSSIEAGPNAAY 267 (282)
T ss_dssp TTCCCCGGG----SSCEEEEEECSSCEE
T ss_pred CCCCccccC----CCCcEEEEECcCeEE
Confidence 544333221 235667766654333
No 341
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.10 E-value=2.2 Score=40.07 Aligned_cols=293 Identities=11% Similarity=0.082 Sum_probs=149.1
Q ss_pred cEEEEecCCCeEEEEEcCCCeeeEeecCc-------------------------ccCE--EEEEEc---CCCCEEEEEe-
Q 016187 78 TLVATGGGDDKGFFWRINQGDWASEIQGH-------------------------KDSV--SSLAFS---MDGQLLASGG- 126 (394)
Q Consensus 78 ~~lasg~~d~~v~~w~~~~~~~~~~~~~h-------------------------~~~V--~~v~~s---~~g~~l~t~s- 126 (394)
..|.|||..|.++|+-+.+++.+..+.-- .+-. ..+++. .||++|+.-.
T Consensus 71 y~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdk 150 (638)
T 3sbq_A 71 YGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDK 150 (638)
T ss_dssp EEEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEET
T ss_pred EEEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecC
Confidence 45889999999999999988876654210 0000 123332 3678887776
Q ss_pred CCCcEEEEeCCCCceEEEEecC-CCCEEEEEEc--CCCCEEEEecCCCeEEE-----EeCCccceeeee---cccCcCeE
Q 016187 127 LDGLVQIWDPSSGNLKCTLEGP-GGGVEWVSWH--PRGHIVLAGSEDSTVWM-----WNADRAAYLNMF---SGHGSSVT 195 (394)
Q Consensus 127 ~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~s~d~~i~i-----w~~~~~~~~~~~---~~h~~~v~ 195 (394)
.+..|-.-++...+....++-+ ...+..++|. |+..++++++....-.- ..++..+....+ .+..-.|.
T Consensus 151 an~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~ 230 (638)
T 3sbq_A 151 ANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMA 230 (638)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEE
T ss_pred CCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEE
Confidence 4556777788888776666544 3568888886 67778887765321110 000110000111 01111110
Q ss_pred -EEEECCCCCe-EEEEeCCCcEEEE---cCCCCceEEEEcCCCCcccCeEEEEEc--------CCCCEEEEEeCCC-cEE
Q 016187 196 -CGDFTPDGKT-ICTGSDDATLRVW---NPKSGENIHVIRGHPYHTEGLTCLTIS--------ADSTLALSGSKDG-SVH 261 (394)
Q Consensus 196 -~~~~~~~~~~-l~s~~~dg~i~vw---d~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~~~l~~g~~dg-~i~ 261 (394)
.+.. +|++ .+-.+.+|...++ +.+.+..+..+. ..+.=..+.|+ .+|++-.. +| .+.
T Consensus 231 ~Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~----~~e~D~~~vfn~~~ie~~vk~G~~~~~---~g~gv~ 301 (638)
T 3sbq_A 231 FQVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMM----RNERDWVVVFDIHAVEAAVKAGDFITL---GDSKTP 301 (638)
T ss_dssp EEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHT----CSSCEEEEEEEHHHHHHHHHTTCCBCC---TTCCCC
T ss_pred EEEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcC----cccccEEEEecHHHHHHHHhcCCeEEE---CCCCee
Confidence 0000 0100 0111222222222 221111000000 00111111221 12322211 21 467
Q ss_pred EEECCC----CcEEEEeccCCCCEEEEEECCCCCeEEEEe-CCCcEEEEeCCCC---------Ccce----eccCCCCEE
Q 016187 262 MVNITT----GKVVSSLVSHTDSIECIGFSRSSPWAATGS-MDQKLIIWDLQHS---------LPRS----TCDHEDGVT 323 (394)
Q Consensus 262 i~d~~~----~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s-~dg~i~iwd~~~~---------~~~~----~~~~~~~v~ 323 (394)
+.|.+. +..+..+..-......+.++|+|++++.++ .+.++.++|+++. .++. ...-.-...
T Consensus 302 ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPl 381 (638)
T 3sbq_A 302 VLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPL 381 (638)
T ss_dssp EEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEE
T ss_pred EEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCccc
Confidence 777765 322222222334556788999999876654 5789999998641 1111 111234567
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCC----------eEEEEeecccCceeEEEE------ccCCCEEEEEe
Q 016187 324 CLMWLGTSKYVVTGCVDGKVRVWDSLSG----------DCVRTFSGHRDAIQAISV------SAHQDFLVSVS 380 (394)
Q Consensus 324 ~~~~~~~~~~l~sg~~dg~i~iwd~~~~----------~~~~~~~~h~~~v~~l~~------~~~~~~l~s~s 380 (394)
..+|.++|.-..|-..|..|--|++... ..+.++.-|-++ -.+.. .+||++|++..
T Consensus 382 Ht~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 382 HTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 8899999955555568999999997543 456666655543 23333 47888988874
No 342
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.01 E-value=1.8 Score=38.35 Aligned_cols=231 Identities=10% Similarity=0.095 Sum_probs=123.6
Q ss_pred EecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccce--eeee----cccCcCeEEEEECCC---CCeEEEE---eCC
Q 016187 145 LEGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAY--LNMF----SGHGSSVTCGDFTPD---GKTICTG---SDD 212 (394)
Q Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~--~~~~----~~h~~~v~~~~~~~~---~~~l~s~---~~d 212 (394)
+...-.....++|.|++.++++--..|.|++++...++. +..+ .........++|+|+ +..|... ..+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333345578899999999777766689999998654432 2111 123456788999995 4445433 234
Q ss_pred CcEEEEcCCCC----------ceEE-EEcCCCCcccCeEEEEEcCCCCEEEEEeC-------------CCcEEEEECCCC
Q 016187 213 ATLRVWNPKSG----------ENIH-VIRGHPYHTEGLTCLTISADSTLALSGSK-------------DGSVHMVNITTG 268 (394)
Q Consensus 213 g~i~vwd~~~~----------~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~g~~-------------dg~i~i~d~~~~ 268 (394)
..|.-|....+ +.+. .+.....| ....+.|.|+|.++++-+. -|+|.-++....
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 45555544431 1111 12211123 2346899999988777542 355555554321
Q ss_pred ---------cEEEEeccCCCCEEEEEECCCCCeEEEE-eCCCcEEEEeCCCCC------------------cceeccCC-
Q 016187 269 ---------KVVSSLVSHTDSIECIGFSRSSPWAATG-SMDQKLIIWDLQHSL------------------PRSTCDHE- 319 (394)
Q Consensus 269 ---------~~~~~~~~h~~~i~~v~~~~~~~~l~s~-s~dg~i~iwd~~~~~------------------~~~~~~~~- 319 (394)
..+.. .+|. ....++|+|++.+.++- +.++.=.|--+.... +.....+.
T Consensus 185 ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~ 262 (347)
T 3das_A 185 PAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDE 262 (347)
T ss_dssp BCTTCSSTTCCEEE-BCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTT
T ss_pred ccCCCCCCCCeEEe-eCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCC
Confidence 01111 2333 34578899987765543 223222222221110 01111122
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeE----EEEeecccCceeEEEEccCCCEEEEEe
Q 016187 320 DGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDC----VRTFSGHRDAIQAISVSAHQDFLVSVS 380 (394)
Q Consensus 320 ~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~l~s~s 380 (394)
.....++|. ++..++..-..+.|....+..... ..-+.+..+.+..|+..|||.++++-.
T Consensus 263 ~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 263 ASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred CCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 245566666 344555555555665555543322 233455557899999999998777644
No 343
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.85 E-value=2.4 Score=39.11 Aligned_cols=110 Identities=12% Similarity=0.141 Sum_probs=61.3
Q ss_pred eeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeee--EeecC------cccCEEEEEEcCC---CCEE-EEE
Q 016187 58 HIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA--SEIQG------HKDSVSSLAFSMD---GQLL-ASG 125 (394)
Q Consensus 58 ~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~--~~~~~------h~~~V~~v~~s~~---g~~l-~t~ 125 (394)
..+...-..-+.++|.|+ ++++++-...+.|++++...++.. ..+.. -......|+|+|+ +.+| ++-
T Consensus 20 ~~~a~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred EEEECCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 333333456689999996 567766544457877775544432 22221 2456789999995 4444 444
Q ss_pred eC------------CCcEEEEeCCCC--ce-----EE-EEec-CCCCEEEEEEcCCCCEEEEec
Q 016187 126 GL------------DGLVQIWDPSSG--NL-----KC-TLEG-PGGGVEWVSWHPRGHIVLAGS 168 (394)
Q Consensus 126 s~------------d~~i~vwd~~~~--~~-----~~-~~~~-~~~~v~~~~~~~~~~~l~~~s 168 (394)
+. ...|.-++...+ +. +. .+.. .......++|.|+++++++.+
T Consensus 99 s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 99 TFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred eccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 32 134555554322 11 11 1221 123467899999999777644
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.38 E-value=2.9 Score=38.06 Aligned_cols=247 Identities=13% Similarity=0.134 Sum_probs=142.8
Q ss_pred CCCeEEEEEcCCCeeeE--eecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCC
Q 016187 85 GDDKGFFWRINQGDWAS--EIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGH 162 (394)
Q Consensus 85 ~d~~v~~w~~~~~~~~~--~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (394)
....+.+-|+..+.... .+.+- +.-.+|..+.+|.=. ..++.|+|+.+...+..+.-+..-+. -+|-....
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~Vvf-WkWis~~~ 118 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTF-WKWISLNT 118 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECCCS-----EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCE-EEEEETTE
T ss_pred CCCeEEEEECCCCCcceecccccc-----eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceE-EEecCCCe
Confidence 34467778877644322 22221 344677777776555 67899999999888877776555444 45654433
Q ss_pred EEEEecCCCeEEEEeCCc-cceeeeeccc----CcCeEEEEECCCCCeEEEEe-------CCCcEEEEcCCCCceEEEEc
Q 016187 163 IVLAGSEDSTVWMWNADR-AAYLNMFSGH----GSSVTCGDFTPDGKTICTGS-------DDATLRVWNPKSGENIHVIR 230 (394)
Q Consensus 163 ~l~~~s~d~~i~iw~~~~-~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~~-------~dg~i~vwd~~~~~~~~~~~ 230 (394)
+-++ .+..|+-|++.. ..+.+.+.-| ...|..-..+++.++++..+ -.|.+.+|..+.+.. +.+.
T Consensus 119 l~lV--T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ie 195 (494)
T 1bpo_A 119 VALV--TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIE 195 (494)
T ss_dssp EEEE--CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEEC
T ss_pred EEEE--cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chhe
Confidence 3222 357899999864 3455555555 34566667789999877543 247889998876543 4455
Q ss_pred CCCCcccCeEEEEEcCCC-----CEEEEEeC---CCcEEEEECCCC--------cEEEEe-c---cCCCCEEEEEECCCC
Q 016187 231 GHPYHTEGLTCLTISADS-----TLALSGSK---DGSVHMVNITTG--------KVVSSL-V---SHTDSIECIGFSRSS 290 (394)
Q Consensus 231 ~~~~~~~~i~~~~~~~~~-----~~l~~g~~---dg~i~i~d~~~~--------~~~~~~-~---~h~~~i~~v~~~~~~ 290 (394)
+|. ... ..+-.+| .++..+.. .+++++.++... +....+ . .-.+-.-++..++..
T Consensus 196 Gha---a~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky 270 (494)
T 1bpo_A 196 GHA---ASF--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH 270 (494)
T ss_dssp CSE---EEE--EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT
T ss_pred eee---eee--EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC
Confidence 542 111 1121111 12333322 378999998542 111111 1 123445678888888
Q ss_pred CeEEEEeCCCcEEEEeCCCCCcceec-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Q 016187 291 PWAATGSMDQKLIIWDLQHSLPRSTC-DHEDGVTCLMWLGTSKYVVTGCVDGKVRVW 346 (394)
Q Consensus 291 ~~l~s~s~dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~iw 346 (394)
..+.....-|.+.+||+.+..+.... -..+.|...+......-++.-...|.|.--
T Consensus 271 gviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v 327 (494)
T 1bpo_A 271 DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSV 327 (494)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEE
T ss_pred CEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEE
Confidence 88889999999999999987554322 122333333333333333333344444433
No 345
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.92 E-value=5.4 Score=39.40 Aligned_cols=306 Identities=12% Similarity=0.104 Sum_probs=169.5
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeec----CcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ----GHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNL 141 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~----~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~ 141 (394)
.|.++... ++.+.+. ..+ .+..++..++++..... -....|.++...++|.+.+ |+.. -|..++..+++.
T Consensus 104 ~i~~i~~~--~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~ 177 (758)
T 3ott_A 104 DVRTMALQ--GDTLWLG-ALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKF 177 (758)
T ss_dssp CEEEEEEE--TTEEEEE-ETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEE
T ss_pred eEEEEEec--CCcEEEE-cCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCce
Confidence 46666543 3444432 333 57778877665433201 1234688998888888765 4444 477888776654
Q ss_pred EEEEecC------CCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcE
Q 016187 142 KCTLEGP------GGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATL 215 (394)
Q Consensus 142 ~~~~~~~------~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 215 (394)
.. +..+ ...|.++...+++..|..|+. +-+..++..+++...........|.++...++|.+.+ |+.+ -+
T Consensus 178 ~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl 253 (758)
T 3ott_A 178 EG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GL 253 (758)
T ss_dssp EE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EE
T ss_pred EE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ce
Confidence 32 2211 224777877776665555553 5688888776543222111234577777777776544 4444 47
Q ss_pred EEEcCCCCceEEEEcC-----CCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEec-----cCCCCEEEEE
Q 016187 216 RVWNPKSGENIHVIRG-----HPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLV-----SHTDSIECIG 285 (394)
Q Consensus 216 ~vwd~~~~~~~~~~~~-----~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~-----~h~~~i~~v~ 285 (394)
.+++..+++.. .+.. .......|.++....++.+.+ |+..| +.++............ .....|.++.
T Consensus 254 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 330 (758)
T 3ott_A 254 YVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLF 330 (758)
T ss_dssp EEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEE
T ss_pred eEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-ccccccCCceeEEecccCCCCCCCceEEEEE
Confidence 78887765432 2221 112334688888888887655 44556 5554332211111111 1234688888
Q ss_pred ECCCCCeEEEEeCCCcEEEEeCCCCCc--ceec--------cCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEE
Q 016187 286 FSRSSPWAATGSMDQKLIIWDLQHSLP--RSTC--------DHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVR 355 (394)
Q Consensus 286 ~~~~~~~l~s~s~dg~i~iwd~~~~~~--~~~~--------~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 355 (394)
..+++.+-+. +.+| +..++..+... .... .....|.++.-.+++++.+ |+ ++-|..|+..+++...
T Consensus 331 ~D~~g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~ 406 (758)
T 3ott_A 331 RDSKGFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIH 406 (758)
T ss_dssp ECTTCCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEE
T ss_pred EcCCCCEEEe-eCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEE
Confidence 8887775443 3444 55666543110 0001 1123588887777776554 44 4569999988776543
Q ss_pred Ee-ec-----ccCceeEEEEccCCCEEEEEeCCCcEEEEe
Q 016187 356 TF-SG-----HRDAIQAISVSAHQDFLVSVSLDGTARVFE 389 (394)
Q Consensus 356 ~~-~~-----h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~ 389 (394)
-. .. ....|.++...+++.+.+ |+..+-+.+++
T Consensus 407 ~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~ 445 (758)
T 3ott_A 407 YNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVD 445 (758)
T ss_dssp EEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEE
T ss_pred eecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEc
Confidence 21 11 124578887777766544 55544466565
No 346
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.88 E-value=2.7 Score=35.87 Aligned_cols=240 Identities=18% Similarity=0.144 Sum_probs=116.6
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecCcccCEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEE
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQGHKDSVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTL 145 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~h~~~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~ 145 (394)
.|..|+... .+.++- . |+.++.|-.+..-.+..-..-...|..++...... ++. . |+.|..|-......+..-
T Consensus 25 ~i~~ia~G~--~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs-~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGY--FHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHS-LAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECS--SEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEE-EEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCC--CeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEE-EEE-E-CCEEEEeeCCCCCCCCCC
Confidence 455666543 233444 3 88998887544221111111233577777654433 333 4 899999975532211111
Q ss_pred ecCCCCEEEEEEcCCCCEEEEecCCCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEEEcCCCCce
Q 016187 146 EGPGGGVEWVSWHPRGHIVLAGSEDSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVWNPKSGEN 225 (394)
Q Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 225 (394)
..-...|..++...... +.-. ++.++.|-......+.........|..++..... .++ -. ||.|..|-.....+
T Consensus 98 ~~~~~~v~~ia~G~~hs--~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~-~~~-l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWAS--YALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT-ALA-VK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETTEE--EEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEE-EE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCCEE--EEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE-EEE-EE-CCEEEEecCCCCCC
Confidence 11123566666554433 3334 8999999754321111111123346555544322 222 23 78998886543211
Q ss_pred EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEE
Q 016187 226 IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIW 305 (394)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iw 305 (394)
+. ........+..++....-.+++ .||.|..|-......+..-......|..|+.......+++ ||++..|
T Consensus 172 lg---~p~~~~~~v~~i~~G~~hs~al---~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g~v~~w 242 (282)
T 3qhy_B 172 TT---VPAEAQSGVDDVAGGIFHSLAL---KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NGKVIAW 242 (282)
T ss_dssp TS---CCGGGGSSEEEEEECSSEEEEE---ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TTEEEEE
T ss_pred CC---CceecCCCeEEEEecCCEEEEE---ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CCEEEEe
Confidence 11 0001123566666554433333 4899999975432111100111235666766655444443 9999999
Q ss_pred eCCCCCcceeccCCCCEEEEEEeCC
Q 016187 306 DLQHSLPRSTCDHEDGVTCLMWLGT 330 (394)
Q Consensus 306 d~~~~~~~~~~~~~~~v~~~~~~~~ 330 (394)
-.....+.. -...|..++....
T Consensus 243 G~n~~gq~~---v~~~v~~iaaG~~ 264 (282)
T 3qhy_B 243 GSSRTAPSS---VQSGVSSIEAGPN 264 (282)
T ss_dssp STTCCCCGG---GSSCEEEEEECSS
T ss_pred cCCCCcccc---CCCCcEEEEECcC
Confidence 755432221 1334555554443
No 347
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.21 E-value=4.2 Score=35.92 Aligned_cols=234 Identities=9% Similarity=0.054 Sum_probs=122.1
Q ss_pred eeeeeccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeee--Eee----cCcccCEEEEEEcCC----CCEEEEEe
Q 016187 57 THIFSGHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWA--SEI----QGHKDSVSSLAFSMD----GQLLASGG 126 (394)
Q Consensus 57 ~~~~~~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~--~~~----~~h~~~V~~v~~s~~----g~~l~t~s 126 (394)
..++...-..-+.++|.|+ +.++++--..++|++++...++.. ..+ ..-......|+|+|+ +.+.++-+
T Consensus 24 ~~~va~gL~~P~~ia~~pd-G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPG-GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCceEEEEcCC-CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 3344444567789999996 567777655889988876555432 212 123456889999995 44444332
Q ss_pred --CCCcEEEEeCCCC----------ceEE-EEec-CCCCEEEEEEcCCCCEEEEecC-------------CCeEEEEeCC
Q 016187 127 --LDGLVQIWDPSSG----------NLKC-TLEG-PGGGVEWVSWHPRGHIVLAGSE-------------DSTVWMWNAD 179 (394)
Q Consensus 127 --~d~~i~vwd~~~~----------~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~s~-------------d~~i~iw~~~ 179 (394)
.+..|.-|....+ +.+. .+.. ....-..+.|.|++.++++.+. -+.|.-.+..
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 3445655655431 1111 1221 1112346899999987777542 3455555554
Q ss_pred cc--------ceeeeecccCcCeEEEEECCCCCeEEEE-eCCCcEEEEcCCCCce------------------EEEEcCC
Q 016187 180 RA--------AYLNMFSGHGSSVTCGDFTPDGKTICTG-SDDATLRVWNPKSGEN------------------IHVIRGH 232 (394)
Q Consensus 180 ~~--------~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~------------------~~~~~~~ 232 (394)
.. .....-.+|..+ ..++|+|+|++.++= +.|+.-.|--+..+.. +..+..
T Consensus 183 G~ip~~nPf~~~~i~a~G~RNp-~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~- 260 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHRNV-QGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWST- 260 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCSBC-CEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECT-
T ss_pred CCccCCCCCCCCeEEeeCCCCc-ceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCC-
Confidence 32 111112355543 478999987655443 2232222221122211 000000
Q ss_pred CCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE----EEEeccCCCCEEEEEECCCCCeEEEE
Q 016187 233 PYHTEGLTCLTISADSTLALSGSKDGSVHMVNITTGKV----VSSLVSHTDSIECIGFSRSSPWAATG 296 (394)
Q Consensus 233 ~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~~~~~----~~~~~~h~~~i~~v~~~~~~~~l~s~ 296 (394)
+......++|. ++.+++..-..+.|..+.+..... ..-+......+..|+..|++.++++.
T Consensus 261 --~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 261 --DEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp --TTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred --CCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 00133445554 455666666666777666654432 11222334568888888888755543
No 348
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.79 E-value=8.7 Score=34.34 Aligned_cols=141 Identities=11% Similarity=0.017 Sum_probs=66.6
Q ss_pred CEEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceEEEEec-------------------CCCCEEEEEEcCC-CCEEEE
Q 016187 109 SVSSLAFSMD--GQLLASGGLDGLVQIWDPSSGNLKCTLEG-------------------PGGGVEWVSWHPR-GHIVLA 166 (394)
Q Consensus 109 ~V~~v~~s~~--g~~l~t~s~d~~i~vwd~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~~ 166 (394)
.|.+++++|. ...|..+...+-|...+- .|+.-..+.. ....+..+.+.|. ...++.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 5888999872 344555555555555432 2222112211 1235778889874 334444
Q ss_pred ecCCCeEEEEeCCccceeeeec-c----c--------CcCeEEEEECCC-CCeEEEEeCCCcEEEEcCCCCceEEEEcCC
Q 016187 167 GSEDSTVWMWNADRAAYLNMFS-G----H--------GSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGENIHVIRGH 232 (394)
Q Consensus 167 ~s~d~~i~iw~~~~~~~~~~~~-~----h--------~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 232 (394)
+..++.|...+-. ++.-..+. + + ...+.++.+.|. ...|+.+...+ |...+ ..++....+..
T Consensus 195 g~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~- 270 (394)
T 3b7f_A 195 GMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGD- 270 (394)
T ss_dssp EEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGG-
T ss_pred EECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCC-
Confidence 4444444443322 21111111 0 0 134788899885 45666666555 33332 12443333321
Q ss_pred CCcc---cCeEEEEEcCC-CCEEEEE
Q 016187 233 PYHT---EGLTCLTISAD-STLALSG 254 (394)
Q Consensus 233 ~~~~---~~i~~~~~~~~-~~~l~~g 254 (394)
.... ..+.++.++|. ...++++
T Consensus 271 ~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 271 AMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp GSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCCCCCccceEEEEECCCCCCEEEEE
Confidence 0111 23567788763 3334444
No 349
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.34 E-value=9.8 Score=32.76 Aligned_cols=204 Identities=7% Similarity=0.023 Sum_probs=104.5
Q ss_pred EEcCCCCEEEEecC--------------CCeEEEEeCCccceeeeecccCcCeEEEEECCCCCeEEEEe--CC--CcEEE
Q 016187 156 SWHPRGHIVLAGSE--------------DSTVWMWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGS--DD--ATLRV 217 (394)
Q Consensus 156 ~~~~~~~~l~~~s~--------------d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~--~d--g~i~v 217 (394)
-+++++..|+-+.. ...|+..++.......... .. +..|++++++|+-.. .+ ..|..
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---DP--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---SC--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---CC--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 45677776655433 2456777776655333222 11 236778888887655 33 34555
Q ss_pred EcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEE
Q 016187 218 WNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALSGSK-DGSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATG 296 (394)
Q Consensus 218 wd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~-dg~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~ 296 (394)
-++.. .....+..... ..++++++.|+-.+. ...|...++..+... .+.. +... ..+.|++.+|+-.
T Consensus 134 ~~~dG-s~~~~lt~~~~-------~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~-~l~~--~~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 134 IRIDG-EEKKKIKNHYL-------FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA-LFYD--CNCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp EETTS-CCCEEEESSCC-------CCSEEETTEEEEECTTTCCEEEEETTTTEEE-EEEC--SCEE-EEEEEETTEEEEE
T ss_pred EECCC-CCeEEEeCCCc-------eEeeEECCEEEEEeCCCceEEEEECCCCCEE-EEeC--CCcc-ceeeecCCEEEEE
Confidence 55543 33333432211 234667776665444 678888888765433 3322 2222 3456888888766
Q ss_pred eCCC--cEEEEeCCCCCcceeccCCCCEEEEEEeCCCCEEEEEe--CCCeEEEEECCCCeEEEEeecccCceeEEEEccC
Q 016187 297 SMDQ--KLIIWDLQHSLPRSTCDHEDGVTCLMWLGTSKYVVTGC--VDGKVRVWDSLSGDCVRTFSGHRDAIQAISVSAH 372 (394)
Q Consensus 297 s~dg--~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~ 372 (394)
...+ .|..-++......... ...+. .+.|.+.+|.-++ ..+.|..-++. |...+.+... .+.. +++.
T Consensus 202 ~~~~~~~I~~~~ldG~~~~~Lt--~~~~~--~~~~~g~~Iy~~~~~~~~~i~~~~~D-G~~r~~l~~~--~~~~--i~i~ 272 (302)
T 3s25_A 202 DVNRDNAIVHVNINNPNPVVLT--EANIE--HYNVYGSLIFYQRGGDNPALCVVKND-GTGFKELAKG--EFCN--INVT 272 (302)
T ss_dssp EGGGTTEEEEECSSSCCCEECS--CSCEE--EEEEETTEEEEEECSSSCEEEEEETT-SCCCEEEEES--CEEE--EEEC
T ss_pred EcCCCcEEEEEECCCCCeEEEe--CCCcc--eEEECCCEEEEEECCCCcEEEEEECC-CCccEEeeCC--ccce--EEEe
Confidence 5443 4555555544332222 22332 3677788877553 23556666654 3333333321 2333 3445
Q ss_pred CCEEEEEe-CCCcE
Q 016187 373 QDFLVSVS-LDGTA 385 (394)
Q Consensus 373 ~~~l~s~s-~dg~i 385 (394)
+.+|+-.. ..+.|
T Consensus 273 ~d~Iy~td~~~~~i 286 (302)
T 3s25_A 273 SQYVYFTDFVSNKE 286 (302)
T ss_dssp SSEEEEEETTTCCE
T ss_pred CCEEEEEECCCCeE
Confidence 55555333 33443
No 350
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=88.93 E-value=9.9 Score=32.26 Aligned_cols=155 Identities=12% Similarity=0.057 Sum_probs=91.9
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCcEEEEE---CCCCcEEEEeccCCCCEEEEEECC--CCCeEEEEeCCCcEEEEeCCCCC
Q 016187 237 EGLTCLTISADSTLALSGSKDGSVHMVN---ITTGKVVSSLVSHTDSIECIGFSR--SSPWAATGSMDQKLIIWDLQHSL 311 (394)
Q Consensus 237 ~~i~~~~~~~~~~~l~~g~~dg~i~i~d---~~~~~~~~~~~~h~~~i~~v~~~~--~~~~l~s~s~dg~i~iwd~~~~~ 311 (394)
+.+..+........++.-+..|.++... +..++... +....+.|..+.. + +..+++..+..|.++...+....
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-ll~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-LKSREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-CSSTTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-cCCCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 3444443333344455556667665433 22221100 1223455666544 3 46789999999999998865432
Q ss_pred cc------eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC---------CCeEEEEeecccCceeEEEEccCCCEE
Q 016187 312 PR------STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSL---------SGDCVRTFSGHRDAIQAISVSAHQDFL 376 (394)
Q Consensus 312 ~~------~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~---------~~~~~~~~~~h~~~v~~l~~~~~~~~l 376 (394)
.+ ....-.+.+..+........|+..+..|.++.++.. .|...-.+.. ...|..+...+++.++
T Consensus 102 ~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~l 180 (276)
T 3no0_A 102 YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYL 180 (276)
T ss_dssp TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEE
T ss_pred hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEE
Confidence 11 111233456666555566788899999999988742 1222212333 3456666555667789
Q ss_pred EEEeCCCcEEEEeccCCC
Q 016187 377 VSVSLDGTARVFEIADFK 394 (394)
Q Consensus 377 ~s~s~dg~i~iw~~~~~~ 394 (394)
+.++..|.++...+.+|+
T Consensus 181 l~~T~~G~~kr~~~~e~~ 198 (276)
T 3no0_A 181 LVITAKGRVKKISHEEIP 198 (276)
T ss_dssp EEEETTSCEEEEEGGGSC
T ss_pred EEEeCCCcEEEeEHHHcc
Confidence 999999999999887764
No 351
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=88.28 E-value=12 Score=32.53 Aligned_cols=188 Identities=12% Similarity=0.143 Sum_probs=105.0
Q ss_pred CCCCeEEEEeCCCcEEEEcCCCCc----eEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC---C------C
Q 016187 201 PDGKTICTGSDDATLRVWNPKSGE----NIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNI---T------T 267 (394)
Q Consensus 201 ~~~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~---~------~ 267 (394)
|+...+++.+.+|.|+--.+...+ .-..++ ..+.+..+........++.-+..|.+.-+.. . .
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk----e~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~ 78 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK----DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDL 78 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC----TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC----CCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCC
Confidence 556678888888988765432110 000011 1233444444444556666667777665543 2 2
Q ss_pred CcEEEEec--cCCCCEEEE-EECC--CCCeEEEEeCCCcEEEEeCCCCCc------ce--eccCCCCEEEEEEeCCCCEE
Q 016187 268 GKVVSSLV--SHTDSIECI-GFSR--SSPWAATGSMDQKLIIWDLQHSLP------RS--TCDHEDGVTCLMWLGTSKYV 334 (394)
Q Consensus 268 ~~~~~~~~--~h~~~i~~v-~~~~--~~~~l~s~s~dg~i~iwd~~~~~~------~~--~~~~~~~v~~~~~~~~~~~l 334 (394)
|.++..+. ...+.|.++ ...+ +..+++..+..|.++.-.+..... .. .....+.+..+........|
T Consensus 79 G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i 158 (323)
T 1wp5_A 79 GQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNEL 158 (323)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEE
T ss_pred CcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEE
Confidence 33222211 123345544 3432 256889999999999987642111 11 11223455555555566678
Q ss_pred EEEeCCCeEEEEECCC-------CeEEE--EeecccCceeEEEEccCCC-EEEEEeCCCcEEEEeccCC
Q 016187 335 VTGCVDGKVRVWDSLS-------GDCVR--TFSGHRDAIQAISVSAHQD-FLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 335 ~sg~~dg~i~iwd~~~-------~~~~~--~~~~h~~~v~~l~~~~~~~-~l~s~s~dg~i~iw~~~~~ 393 (394)
+..+.+|.+..++... ++-++ .+.. .+.|.++..-+++. .|+..+..|..+..++..|
T Consensus 159 ~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~ 226 (323)
T 1wp5_A 159 FLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKE-GDYIVSGQLITSKDESIVVATQRGAVKKMKLTEF 226 (323)
T ss_dssp EEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred EEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCC-CCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHc
Confidence 8889999998887521 11122 2332 34465664444445 7889999999888887765
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.76 E-value=1.9 Score=40.48 Aligned_cols=104 Identities=16% Similarity=0.082 Sum_probs=67.4
Q ss_pred eEEEEECCCCCeEEEE-eCCCcEEEEcCCCCce-----E----EEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 016187 194 VTCGDFTPDGKTICTG-SDDATLRVWNPKSGEN-----I----HVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMV 263 (394)
Q Consensus 194 v~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~-----~----~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~ 263 (394)
...+.++|||++++.+ -.+.++.++|++.-.. + ..+........+.....|.++|....+---|..|..|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 3457889999988655 4578899999864211 0 0011111234467788999999666677789999999
Q ss_pred ECCCC----------cEEEEeccCCCCEEEEE-----ECCCCCeEEEEe
Q 016187 264 NITTG----------KVVSSLVSHTDSIECIG-----FSRSSPWAATGS 297 (394)
Q Consensus 264 d~~~~----------~~~~~~~~h~~~i~~v~-----~~~~~~~l~s~s 297 (394)
++... .++.++..|-.+-.-.+ -.++|+||++..
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 98653 46666766654433222 246788888764
No 353
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=86.71 E-value=15 Score=31.80 Aligned_cols=191 Identities=12% Similarity=0.125 Sum_probs=108.8
Q ss_pred CCCCCeEEEEeCCCcEEEEcCCCCce-------EEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC---CC-
Q 016187 200 TPDGKTICTGSDDATLRVWNPKSGEN-------IHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVNIT---TG- 268 (394)
Q Consensus 200 ~~~~~~l~s~~~dg~i~vwd~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~---~~- 268 (394)
-|+..++++.+.+|.|+--.+..-+. +..+.. -..+.+..+........++..+..|.++-+... ..
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~l--ke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDL--NDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSS 82 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCC--CTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC--
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceeccc--CCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCC
Confidence 35667788889999998775433211 111110 012334444444445566677778877666542 21
Q ss_pred -----cEE---EEeccCCCCEEEEEECC---CCCeEEEEeCCCcEEEEeCCCCCc-------ceeccCCCCEEEEEEeCC
Q 016187 269 -----KVV---SSLVSHTDSIECIGFSR---SSPWAATGSMDQKLIIWDLQHSLP-------RSTCDHEDGVTCLMWLGT 330 (394)
Q Consensus 269 -----~~~---~~~~~h~~~i~~v~~~~---~~~~l~s~s~dg~i~iwd~~~~~~-------~~~~~~~~~v~~~~~~~~ 330 (394)
..+ -.+. ..+.|.++...+ ...+++..+..|.++.-.+..... .......+.+..+.....
T Consensus 83 r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~ 161 (312)
T 1suu_A 83 RASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFK 161 (312)
T ss_dssp -----CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECT
T ss_pred ccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCC
Confidence 110 0111 123444443322 456788889999999887643211 111222455666655555
Q ss_pred CCEEEEEeCCCeEEEEECCC---------CeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCCC
Q 016187 331 SKYVVTGCVDGKVRVWDSLS---------GDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADFK 394 (394)
Q Consensus 331 ~~~l~sg~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~~ 394 (394)
...++..+.+|.+..+.... |...-.+.. ...|..+..-.++..++..+..|..+...+.+++
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~ 233 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSKIS 233 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSC
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHHhc
Confidence 67888899999999997532 222223333 4456666555566778899999999999887763
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=85.35 E-value=18 Score=31.52 Aligned_cols=188 Identities=11% Similarity=0.145 Sum_probs=105.0
Q ss_pred CeEEEEeCCCcEEEEcCCCC-------ceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE---CCC------
Q 016187 204 KTICTGSDDATLRVWNPKSG-------ENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN---ITT------ 267 (394)
Q Consensus 204 ~~l~s~~~dg~i~vwd~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d---~~~------ 267 (394)
..+++.+.+|.|+--.+.+. +-+..+.. ...+.+..+........++.-+..|.++... +..
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~--ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGL--KQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCC--CGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCcccccc--CCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 35667777787775432211 10111110 0123344444444444555555666655443 332
Q ss_pred CcEEEEecc--CCCCEEEE-EECC--CCCeEEEEeCCCcEEEEeCCCCCcc-------eeccCCCCEEEEEEeCCCCEEE
Q 016187 268 GKVVSSLVS--HTDSIECI-GFSR--SSPWAATGSMDQKLIIWDLQHSLPR-------STCDHEDGVTCLMWLGTSKYVV 335 (394)
Q Consensus 268 ~~~~~~~~~--h~~~i~~v-~~~~--~~~~l~s~s~dg~i~iwd~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~ 335 (394)
|.++..+.. ..+.|.++ .+.+ +..+++..+..|.++.-.+...... ....-.+.+..+........|+
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLL 161 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEE
Confidence 333222211 23445544 3432 5779999999999998876432111 1112244566665556667888
Q ss_pred EEeCCCeEEEEECC--C---------CeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCCC
Q 016187 336 TGCVDGKVRVWDSL--S---------GDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADFK 394 (394)
Q Consensus 336 sg~~dg~i~iwd~~--~---------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~~ 394 (394)
..+..|.+..+.+. . |...-.+. ....|.++...+.+.+|+.++..|.++.-.+.+|+
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~ 230 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYP 230 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSC
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcc
Confidence 89999999988766 2 11111232 24557777666667799999999999998887764
No 355
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=82.91 E-value=22 Score=30.54 Aligned_cols=175 Identities=8% Similarity=-0.022 Sum_probs=95.2
Q ss_pred EEEcCCCCEEEEEeCC--------------CcEEEEeCCCCceEEEEecCCCCEEEEEEcCCCCEEEEec----CCCeEE
Q 016187 113 LAFSMDGQLLASGGLD--------------GLVQIWDPSSGNLKCTLEGPGGGVEWVSWHPRGHIVLAGS----EDSTVW 174 (394)
Q Consensus 113 v~~s~~g~~l~t~s~d--------------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~s----~d~~i~ 174 (394)
--++++|.+|+=+... ..|+..++..++....... . ...|+++++.|+-.. ....|+
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---P--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---C--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---C--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 3457888887655432 3577777776654332221 1 236777887776554 334555
Q ss_pred EEeCCccceeeeecccCcCeEEEEECCCCCeEEEEeC-CCcEEEEcCCCCceEEEEcCCCCcccCeEEEEEcCCCCEEEE
Q 016187 175 MWNADRAAYLNMFSGHGSSVTCGDFTPDGKTICTGSD-DATLRVWNPKSGENIHVIRGHPYHTEGLTCLTISADSTLALS 253 (394)
Q Consensus 175 iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 253 (394)
..++...... .+..+.. .+|+|+++.|+-.+. ..+|.+-++..+.....+.+ ... ..+.|++.+++-
T Consensus 133 ~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~------~~~-~~~~P~g~~iy~ 200 (302)
T 3s25_A 133 RIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC------NCY-KPVVLDDTNVYY 200 (302)
T ss_dssp EEETTSCCCE-EEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS------CEE-EEEEEETTEEEE
T ss_pred EEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC------Ccc-ceeeecCCEEEE
Confidence 5566544332 2333322 356778888875554 56788888765544333321 121 235587777765
Q ss_pred EeCC--CcEEEEECCCCcEEEEeccCCCCEEEEEECCCCCeEEEEeC--CCcEEEEeCCC
Q 016187 254 GSKD--GSVHMVNITTGKVVSSLVSHTDSIECIGFSRSSPWAATGSM--DQKLIIWDLQH 309 (394)
Q Consensus 254 g~~d--g~i~i~d~~~~~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~--dg~i~iwd~~~ 309 (394)
.... ..|...++.... ...+.. ..+ ..|+|++.+|.-++. .+.|..-++..
T Consensus 201 t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 201 MDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred EEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 5433 367777776543 223322 233 236777777765532 34455555543
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=81.58 E-value=32 Score=31.60 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=57.9
Q ss_pred CEEEEEEcCCCC-EEEEecCCCeEEEEeCCccc---eeeeec-----c----cCcCeEEEEECCC----CCeEEEEeC--
Q 016187 151 GVEWVSWHPRGH-IVLAGSEDSTVWMWNADRAA---YLNMFS-----G----HGSSVTCGDFTPD----GKTICTGSD-- 211 (394)
Q Consensus 151 ~v~~~~~~~~~~-~l~~~s~d~~i~iw~~~~~~---~~~~~~-----~----h~~~v~~~~~~~~----~~~l~s~~~-- 211 (394)
....++|.|++. .++++...|.|++++..... .+..+. + .......++|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 456799999986 45556778999999754321 111111 1 1345778999996 333333221
Q ss_pred CC----------cEEEEcCCC----------CceEEEEc-CCCCcccCeEEEEEcCCCCEEEEEeCC
Q 016187 212 DA----------TLRVWNPKS----------GENIHVIR-GHPYHTEGLTCLTISADSTLALSGSKD 257 (394)
Q Consensus 212 dg----------~i~vwd~~~----------~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~g~~d 257 (394)
++ .|.-|.+.. .+.+..+. ....| ....|.|.|||.++++-+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECCCCcEEEEeCCC
Confidence 11 333354432 11222222 11223 35789999999888776553
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.58 E-value=10 Score=38.70 Aligned_cols=39 Identities=26% Similarity=0.452 Sum_probs=34.1
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q 016187 320 DGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFS 358 (394)
Q Consensus 320 ~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 358 (394)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356778888899999999999999999999999988753
No 358
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=78.38 E-value=32 Score=29.64 Aligned_cols=231 Identities=13% Similarity=0.111 Sum_probs=120.7
Q ss_pred CCCCEEEEecCCCeEEEEeCCccce-------eeeec-ccCcCeEEEEECCCCCeEEEEeCCCcEEEEc---CCCCceEE
Q 016187 159 PRGHIVLAGSEDSTVWMWNADRAAY-------LNMFS-GHGSSVTCGDFTPDGKTICTGSDDATLRVWN---PKSGENIH 227 (394)
Q Consensus 159 ~~~~~l~~~s~d~~i~iw~~~~~~~-------~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~vwd---~~~~~~~~ 227 (394)
++..++++.+.+|.|+--.+..-+. +..+. ...+.+..+........++..+..|.++-.. +.......
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4556788888999998776532211 11111 1223444444444455677777788765543 32221000
Q ss_pred ----EEcCCC-CcccCeEEEEEcC---CCCEEEEEeCCCcEEEEECC-------CCcEEEEeccCCCCEEEEEECCCCCe
Q 016187 228 ----VIRGHP-YHTEGLTCLTISA---DSTLALSGSKDGSVHMVNIT-------TGKVVSSLVSHTDSIECIGFSRSSPW 292 (394)
Q Consensus 228 ----~~~~~~-~~~~~i~~~~~~~---~~~~l~~g~~dg~i~i~d~~-------~~~~~~~~~~h~~~i~~v~~~~~~~~ 292 (394)
...... ...+.+..+...+ +..+++..+..|.++...+. .|.....+.. .+.+-.+........
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCE
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCE
Confidence 000000 0123455443332 46678888999999988763 2322323333 345555544444567
Q ss_pred EEEEeCCCcEEEEeCCCCC--cc-----e--eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-------CeEEEE
Q 016187 293 AATGSMDQKLIIWDLQHSL--PR-----S--TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS-------GDCVRT 356 (394)
Q Consensus 293 l~s~s~dg~i~iwd~~~~~--~~-----~--~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~-------~~~~~~ 356 (394)
++..+..|.+..+....-. .+ . .....+.|..+....++..|++.+..|..+..++.. ++=+..
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~~~~~R~~kGv~~ 244 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKISELKRGATGYTS 244 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGSCBCCTTCCCEEC
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHhcccCCCCCCEEe
Confidence 8888999999988764311 01 0 112244566665556667788999999999987632 121222
Q ss_pred ee---cccCceeEE-EEccCCCEEEEEeCCCcEEEEecc
Q 016187 357 FS---GHRDAIQAI-SVSAHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 357 ~~---~h~~~v~~l-~~~~~~~~l~s~s~dg~i~iw~~~ 391 (394)
+. ...+.+-.+ .+. +...++..+..|.+.-..+.
T Consensus 245 ~~~~k~~~~~lv~~~~~~-~~~~l~~~t~~g~~~r~~~~ 282 (312)
T 1suu_A 245 YKKSDKKAGSVVDAIAVS-EDDEILLVSKRSKALRTVAG 282 (312)
T ss_dssp SCTTCTTTCSEEEEEEEC-TTCEEEEEETTCEEEEEEGG
T ss_pred eEccCCCCCeEEEEEEeC-CCCEEEEEeCCCeEEEEEcc
Confidence 22 223344343 444 44555556666644434443
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.35 E-value=28 Score=35.45 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=33.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE 146 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 146 (394)
.+.+++..++..+++|-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 56778888888999999999999999999998877653
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=76.23 E-value=41 Score=29.79 Aligned_cols=258 Identities=12% Similarity=0.074 Sum_probs=118.4
Q ss_pred ccCEEEEEEcC--CCCEEEEEeCCC----cEEEEeCCCCceEEEEec--------------CCCCEEEEEEcCC--CCEE
Q 016187 107 KDSVSSLAFSM--DGQLLASGGLDG----LVQIWDPSSGNLKCTLEG--------------PGGGVEWVSWHPR--GHIV 164 (394)
Q Consensus 107 ~~~V~~v~~s~--~g~~l~t~s~d~----~i~vwd~~~~~~~~~~~~--------------~~~~v~~~~~~~~--~~~l 164 (394)
...|.+|++.| .+.+++.+ ..+ .|...+ ..|+.-..+.. ....|..+++.|. ...+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l 131 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTW 131 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCE
T ss_pred CCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEE
Confidence 35699999998 55555544 344 344332 22322111111 0124677888873 3455
Q ss_pred EEecCCCeEEEEeCCccc--eeeeec----------------ccCcCeEEEEECCC-CCeEEEEeCCCcEEEEcCCCCce
Q 016187 165 LAGSEDSTVWMWNADRAA--YLNMFS----------------GHGSSVTCGDFTPD-GKTICTGSDDATLRVWNPKSGEN 225 (394)
Q Consensus 165 ~~~s~d~~i~iw~~~~~~--~~~~~~----------------~h~~~v~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~ 225 (394)
.++...+.|+..+-.... .+.... .....+.++.+.|. ...|+.+..++.|...+ ..++.
T Consensus 132 ~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t 210 (394)
T 3b7f_A 132 YAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD 210 (394)
T ss_dssp EEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred EEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence 555555665554322211 111110 01235778889883 44555554444443332 22333
Q ss_pred EEEEcCC-C--C-c------ccCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCcEEEEecc--CC---CCEEEEEECCC
Q 016187 226 IHVIRGH-P--Y-H------TEGLTCLTISAD-STLALSGSKDGSVHMVNITTGKVVSSLVS--HT---DSIECIGFSRS 289 (394)
Q Consensus 226 ~~~~~~~-~--~-~------~~~i~~~~~~~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--h~---~~i~~v~~~~~ 289 (394)
...+... . . . ...+.++.+.|. ...++++...+ |...+ ..++....+.. .. ..+.++.++|.
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCCCCCCCCccceEEEEECCC
Confidence 3332210 0 0 0 124788999886 35666666544 44333 23443333321 11 34567888763
Q ss_pred -CCeEEEEeC-----------CCcEEEEeCCCC-Cccee--ccCCC-------CEEEEEEeCC-CCEEEEEeCCCeEEEE
Q 016187 290 -SPWAATGSM-----------DQKLIIWDLQHS-LPRST--CDHED-------GVTCLMWLGT-SKYVVTGCVDGKVRVW 346 (394)
Q Consensus 290 -~~~l~s~s~-----------dg~i~iwd~~~~-~~~~~--~~~~~-------~v~~~~~~~~-~~~l~sg~~dg~i~iw 346 (394)
...+..+.. ++...+|..... ..-.. ..... ....+++.|. ...|..++.++.|..-
T Consensus 289 ~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S 368 (394)
T 3b7f_A 289 DPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS 368 (394)
T ss_dssp CTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE
T ss_pred CCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 233333321 333455543321 11000 00010 0134667764 3456667666665543
Q ss_pred ECCCCeEEEEeecccCceeEEEEc
Q 016187 347 DSLSGDCVRTFSGHRDAIQAISVS 370 (394)
Q Consensus 347 d~~~~~~~~~~~~h~~~v~~l~~~ 370 (394)
...|+.-..+..+-..+.+|+|.
T Consensus 369 -~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 369 -ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp -SSTTSBCEEEECSCSCEEEEEEE
T ss_pred -CCCCCCceEcccCCCCeeEEEEe
Confidence 23344444444444456677664
No 361
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=75.48 E-value=44 Score=29.67 Aligned_cols=192 Identities=11% Similarity=0.138 Sum_probs=109.2
Q ss_pred ECCCCCeEEEEeCCCcEEEEcCCC-------CceEEEEcCCCCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE---CC--
Q 016187 199 FTPDGKTICTGSDDATLRVWNPKS-------GENIHVIRGHPYHTEGLTCLTISADSTLALSGSKDGSVHMVN---IT-- 266 (394)
Q Consensus 199 ~~~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d---~~-- 266 (394)
+-|+..++++.+.+|.|+--.+.. ++-+..+... ....+..+........++.-+..|.+.-+. +.
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk--e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~ 80 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK--EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEA 80 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS--CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC--CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCC
Confidence 356778899999999998753311 1111122111 234455555555556666667777766554 32
Q ss_pred ----CCcEEEE---eccCCCCEEEEE-EC--CCCCeEEEEeCCCcEEEEeCCCCCcc-------eeccCCCCEEEEEEeC
Q 016187 267 ----TGKVVSS---LVSHTDSIECIG-FS--RSSPWAATGSMDQKLIIWDLQHSLPR-------STCDHEDGVTCLMWLG 329 (394)
Q Consensus 267 ----~~~~~~~---~~~h~~~i~~v~-~~--~~~~~l~s~s~dg~i~iwd~~~~~~~-------~~~~~~~~v~~~~~~~ 329 (394)
.|..+.. +. ..+.|.++. +. ....+|+.++..|.++.-.+...... ....-.+.+..+....
T Consensus 81 ~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~ 159 (370)
T 3l6v_A 81 GSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTD 159 (370)
T ss_dssp CTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEEC
T ss_pred CcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeC
Confidence 2222222 22 234455443 33 24568999999999998876422110 1112234455555555
Q ss_pred CCCEEEEEeCCCeEEEEECCC---------CeEEEEeecccCceeEEEEcc-----------------------------
Q 016187 330 TSKYVVTGCVDGKVRVWDSLS---------GDCVRTFSGHRDAIQAISVSA----------------------------- 371 (394)
Q Consensus 330 ~~~~l~sg~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~l~~~~----------------------------- 371 (394)
....|+..+..|.+..++... |...-.+.. ...|.++...+
T Consensus 160 ~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~-~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~ 238 (370)
T 3l6v_A 160 GDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAK-GEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVI 238 (370)
T ss_dssp SCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEECCC---------------------------
T ss_pred CCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCC-CCEEEEEEEecccccccccccccccccccccccccccccc
Confidence 666788888999988886421 211112222 34454544433
Q ss_pred ------CCCEEEEEeCCCcEEEEeccCCC
Q 016187 372 ------HQDFLVSVSLDGTARVFEIADFK 394 (394)
Q Consensus 372 ------~~~~l~s~s~dg~i~iw~~~~~~ 394 (394)
++..++.++..|..+...+..|+
T Consensus 239 ~~~~~~~~~~il~vTe~G~gKrt~~~e~~ 267 (370)
T 3l6v_A 239 DVADNGDVAYILTATENGYGKRTPLAEYP 267 (370)
T ss_dssp --------CEEEEEETTSEEEEEEGGGSC
T ss_pred ccccccCCceEEEeeCCCCEEEEEHHHhc
Confidence 45689999999999999888774
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=73.52 E-value=40 Score=28.41 Aligned_cols=196 Identities=13% Similarity=0.094 Sum_probs=111.2
Q ss_pred cCeEEEEECCCCCeEEEEeCCCcEEE---EcCCCCceEEEEcCCCCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCC
Q 016187 192 SSVTCGDFTPDGKTICTGSDDATLRV---WNPKSGENIHVIRGHPYHTEGLTCLTISA-DSTLALSGSKDGSVHMVNITT 267 (394)
Q Consensus 192 ~~v~~~~~~~~~~~l~s~~~dg~i~v---wd~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~g~~dg~i~i~d~~~ 267 (394)
+.+..+.......+|+.-+..|.++- |++....... + . ...+.|..+.... +..+++..+.+|.++...+..
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l--~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-L-K--SREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-C-S--STTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-c-C--CCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHH
Confidence 34444433334445555666676543 3433221111 1 1 1234566654421 467899999999999988643
Q ss_pred C------cEEEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCCCCCc---------ceeccCCCCEEEEEEeCCCC
Q 016187 268 G------KVVSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQHSLP---------RSTCDHEDGVTCLMWLGTSK 332 (394)
Q Consensus 268 ~------~~~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~~~~~---------~~~~~~~~~v~~~~~~~~~~ 332 (394)
- .....+.. .+.+..+........++..+..|.+..+....-.. .......+.|..+...++..
T Consensus 100 ~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 100 FEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP 178 (276)
T ss_dssp TTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS
T ss_pred hhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC
Confidence 2 22222332 34555555555666788888999988887532100 01122345566666666677
Q ss_pred EEEEEeCCCeEEEEECC-------CCeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEE--EeccCC
Q 016187 333 YVVTGCVDGKVRVWDSL-------SGDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARV--FEIADF 393 (394)
Q Consensus 333 ~l~sg~~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~i--w~~~~~ 393 (394)
+++..+..|.++...+. .++-+..+. -.+.+..+....+...++..+.+|.+.. +++.+.
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~i 247 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKDI 247 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGGS
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHHC
Confidence 89999999999988752 223333342 2344555544344456677788888877 776543
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=69.95 E-value=55 Score=28.42 Aligned_cols=229 Identities=13% Similarity=0.090 Sum_probs=121.7
Q ss_pred CEEEEecCCCeEEEEeCCccc-------eeeeec-ccCcCeEEEEECCCCCeEEEEeCCCcEE---EEcCCCC------c
Q 016187 162 HIVLAGSEDSTVWMWNADRAA-------YLNMFS-GHGSSVTCGDFTPDGKTICTGSDDATLR---VWNPKSG------E 224 (394)
Q Consensus 162 ~~l~~~s~d~~i~iw~~~~~~-------~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~dg~i~---vwd~~~~------~ 224 (394)
..+++.+.+|.|+--.+.+-. -+..+. ...+.+..+........|+.-+..|.+. +|++... .
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 356677777877755432110 011111 1233444443333445555555666543 3455432 1
Q ss_pred eEEEEcCCCCcccCeEEEEEcC---CCCEEEEEeCCCcEEEEECCC-------CcEEEEeccCCCCEEEEEECCCCCeEE
Q 016187 225 NIHVIRGHPYHTEGLTCLTISA---DSTLALSGSKDGSVHMVNITT-------GKVVSSLVSHTDSIECIGFSRSSPWAA 294 (394)
Q Consensus 225 ~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~g~~dg~i~i~d~~~-------~~~~~~~~~h~~~i~~v~~~~~~~~l~ 294 (394)
.+..+-.. ...+.|..+..-+ +..+++..+.+|.++...+.. +.....+.. .+.+..+........++
T Consensus 84 ~i~~~l~l-~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 84 HVANLLAF-QPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EHHHHTTC-CTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEE
T ss_pred EHHHccCC-CCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEE
Confidence 11000000 1234455543333 578999999999999987643 222223333 34444444444556788
Q ss_pred EEeCCCcEEEEeCC--CCCc--c-------eeccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-------CeEEEE
Q 016187 295 TGSMDQKLIIWDLQ--HSLP--R-------STCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS-------GDCVRT 356 (394)
Q Consensus 295 s~s~dg~i~iwd~~--~~~~--~-------~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~-------~~~~~~ 356 (394)
..+..|.+..+... .-.. + ......+.|.++...+...+|+..+..|.++.-.+.. ++-+..
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~ 241 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLT 241 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEES
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEE
Confidence 88889998888765 2110 0 0122345677777667777999999999998876422 122222
Q ss_pred --eecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 357 --FSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 357 --~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
+..-.+.+-.+....+...++..+.+|.+..+.+.+
T Consensus 242 ~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 242 VMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp SCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 222133454444444455666677777777776654
No 364
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=67.96 E-value=58 Score=27.93 Aligned_cols=231 Identities=12% Similarity=0.064 Sum_probs=119.3
Q ss_pred CCCEEEEecCCCeEEEEeCCccceee---------eecccCcCeEEEEECCCCCeEEEEeCCCcEEE---EcCCCCce--
Q 016187 160 RGHIVLAGSEDSTVWMWNADRAAYLN---------MFSGHGSSVTCGDFTPDGKTICTGSDDATLRV---WNPKSGEN-- 225 (394)
Q Consensus 160 ~~~~l~~~s~d~~i~iw~~~~~~~~~---------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~v---wd~~~~~~-- 225 (394)
+..++++.+.+|.|+--.+..-+..+ .+. ..+.+..+........|+..+..|.+.- +++.....
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 44567778888888766553311110 011 1233333333334556666677777443 44433211
Q ss_pred --EEEEcCCC-CcccCeEEEEEc---CCCCEEEEEeCCCcEEEEECCC-------CcEEEEeccCCCCEEEEEECCCCCe
Q 016187 226 --IHVIRGHP-YHTEGLTCLTIS---ADSTLALSGSKDGSVHMVNITT-------GKVVSSLVSHTDSIECIGFSRSSPW 292 (394)
Q Consensus 226 --~~~~~~~~-~~~~~i~~~~~~---~~~~~l~~g~~dg~i~i~d~~~-------~~~~~~~~~h~~~i~~v~~~~~~~~ 292 (394)
........ ...+.|..+..- .++.+++..+..|.++...+.. +.....+..+ +.+-.+........
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCE
Confidence 11000101 123345555432 3566788899999999987631 2222233334 44444444444556
Q ss_pred EEEEeCCCcEEEEeCCCCC-------cce--eccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-------C--eEE
Q 016187 293 AATGSMDQKLIIWDLQHSL-------PRS--TCDHEDGVTCLMWLGTSKYVVTGCVDGKVRVWDSLS-------G--DCV 354 (394)
Q Consensus 293 l~s~s~dg~i~iwd~~~~~-------~~~--~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~-------~--~~~ 354 (394)
++..+..|.+..++...-. -.. .....+.|.++....+...|++.+..|.++-.++.. + ...
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~ 239 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVIS 239 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEES
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCEEe
Confidence 7778888888888753210 001 122344566665555566788999999999886521 1 111
Q ss_pred EEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 355 RTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 355 ~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
..+..-.+.+-.+....+...++..+.+|.+.-+.+.+
T Consensus 240 ~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 240 IKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred eEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 12332234554444433445566677777766666554
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.94 E-value=6.8 Score=40.84 Aligned_cols=37 Identities=27% Similarity=0.467 Sum_probs=31.5
Q ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEee
Q 016187 322 VTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFS 358 (394)
Q Consensus 322 v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 358 (394)
+.+++..++..+|++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4455667888999999999999999999999988754
No 366
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=63.80 E-value=70 Score=27.39 Aligned_cols=193 Identities=12% Similarity=0.086 Sum_probs=105.1
Q ss_pred CCCCeEEEEeCCCcEEEEcCCCCceEEE----EcCCC-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC---CC-----
Q 016187 201 PDGKTICTGSDDATLRVWNPKSGENIHV----IRGHP-YHTEGLTCLTISADSTLALSGSKDGSVHMVNI---TT----- 267 (394)
Q Consensus 201 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~-~~~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~---~~----- 267 (394)
|+...+++.+.+|.|+--.+..-+.... +.+.. -..+.+..+........++..+..|.+.-+.. ..
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 3455678888899988766543221110 00000 01233444444444555666667777655543 22
Q ss_pred -CcEEEEec--cCCCCEEEEEE-C--CCCCeEEEEeCCCcEEEEeCCCCCc---c--e--eccCCCCEEEEEEeCCCCEE
Q 016187 268 -GKVVSSLV--SHTDSIECIGF-S--RSSPWAATGSMDQKLIIWDLQHSLP---R--S--TCDHEDGVTCLMWLGTSKYV 334 (394)
Q Consensus 268 -~~~~~~~~--~h~~~i~~v~~-~--~~~~~l~s~s~dg~i~iwd~~~~~~---~--~--~~~~~~~v~~~~~~~~~~~l 334 (394)
|.++..+. ...+.|.++.. . ++..+++..+..|.++.-.+..... . . .....+.+..+........|
T Consensus 81 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i 160 (307)
T 1zi0_A 81 RGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEV 160 (307)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEE
T ss_pred CCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEE
Confidence 22222111 12344555433 2 3466788999999999887642111 0 1 11122455555555556678
Q ss_pred EEEeCCCeEEEEECCC---------CeEEEEeecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCCC
Q 016187 335 VTGCVDGKVRVWDSLS---------GDCVRTFSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADFK 394 (394)
Q Consensus 335 ~sg~~dg~i~iwd~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~~ 394 (394)
+..+.+|.+..++... |...-.+.. .+.|.++..-.++..++..+..|.++-.++..|+
T Consensus 161 ~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~ 228 (307)
T 1zi0_A 161 MLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYP 228 (307)
T ss_dssp EEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGGGSC
T ss_pred EEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhc
Confidence 8889999988887521 221112332 3456666555556789999999999998887663
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.68 E-value=15 Score=35.79 Aligned_cols=38 Identities=13% Similarity=0.462 Sum_probs=30.7
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCeEEEEeec
Q 016187 320 DGVTCLMWLGTSKYVVTGCVDGKVRVWDSLSGDCVRTFSG 359 (394)
Q Consensus 320 ~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 359 (394)
..|.++.+ +..+|++-+.|.++|+|++.+++++.+..-
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34665544 467999999999999999999999887653
No 368
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.35 E-value=34 Score=35.65 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=31.7
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLE 146 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 146 (394)
.+.+++..++..+++|-+.|+++|||++.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44566677888999999999999999999998877654
No 369
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=59.68 E-value=1.1e+02 Score=28.12 Aligned_cols=105 Identities=20% Similarity=0.187 Sum_probs=59.7
Q ss_pred cCEEEEEEcCCCC-EEEEEeCCCcEEEEeCCCCc---eEEEEe---------cCCCCEEEEEEcCC----CCEEEEecC-
Q 016187 108 DSVSSLAFSMDGQ-LLASGGLDGLVQIWDPSSGN---LKCTLE---------GPGGGVEWVSWHPR----GHIVLAGSE- 169 (394)
Q Consensus 108 ~~V~~v~~s~~g~-~l~t~s~d~~i~vwd~~~~~---~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~s~- 169 (394)
..-+.|+|.|+|. .|+.+...|.|++++..... .+..+. ...+....++|+|+ +.++++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999996 45566788999999754221 122221 11456888999996 343333221
Q ss_pred -C----------CeEEEEeCCc----------cceeeeec--ccCcCeEEEEECCCCCeEEEEeCC
Q 016187 170 -D----------STVWMWNADR----------AAYLNMFS--GHGSSVTCGDFTPDGKTICTGSDD 212 (394)
Q Consensus 170 -d----------~~i~iw~~~~----------~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d 212 (394)
+ ..|.-|.+.. .+.+..+. ........++|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455431 11222221 112234678999999877766543
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.45 E-value=45 Score=31.73 Aligned_cols=59 Identities=25% Similarity=0.394 Sum_probs=41.9
Q ss_pred CEEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCceEEEEecCC-CCEEEEEEcCCCCEEEEe
Q 016187 109 SVSSLAFSMDGQLLASGGLD------------GLVQIWDPSSGNLKCTLEGPG-GGVEWVSWHPRGHIVLAG 167 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d------------~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~ 167 (394)
..--|+|+|.|.+++.-..+ ..+.+.+..++++...+..+. ..++.++|+|+++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34678999999966544322 235566777888877776654 578899999999877653
No 371
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.04 E-value=39 Score=32.16 Aligned_cols=58 Identities=21% Similarity=0.346 Sum_probs=41.2
Q ss_pred EEEEEEcCCCCEEEEecCC------------CeEEEEeCCccceeeeeccc-CcCeEEEEECCCCCeEEEE
Q 016187 152 VEWVSWHPRGHIVLAGSED------------STVWMWNADRAAYLNMFSGH-GSSVTCGDFTPDGKTICTG 209 (394)
Q Consensus 152 v~~~~~~~~~~~l~~~s~d------------~~i~iw~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~ 209 (394)
.--|+|+|.|.+++.-..+ ..+.+.+..+++..+.+.+. ...++.+.|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999977664332 24556666677766655554 5788999999999887665
No 372
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=56.34 E-value=99 Score=26.71 Aligned_cols=233 Identities=9% Similarity=0.022 Sum_probs=122.4
Q ss_pred CCCCEEEEecCCCeEEEEeCCccc----eeeeecccCcCeEEEEECCCCCeEEEEeCCCcEEE---EcCCCCc----eEE
Q 016187 159 PRGHIVLAGSEDSTVWMWNADRAA----YLNMFSGHGSSVTCGDFTPDGKTICTGSDDATLRV---WNPKSGE----NIH 227 (394)
Q Consensus 159 ~~~~~l~~~s~d~~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~v---wd~~~~~----~~~ 227 (394)
|+..++++.+.+|.|+--.+..-. .-..+. ..+.+..+........|+..+..|.+.- +++.... -..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 455677888889988866543110 001111 2234444444444556666677777543 3443221 010
Q ss_pred EEcCCCC-cccCeEEE-EEcC--CCCEEEEEeCCCcEEEEECC--------CCcEEEEeccCCCCEEEEEECCCCCeEEE
Q 016187 228 VIRGHPY-HTEGLTCL-TISA--DSTLALSGSKDGSVHMVNIT--------TGKVVSSLVSHTDSIECIGFSRSSPWAAT 295 (394)
Q Consensus 228 ~~~~~~~-~~~~i~~~-~~~~--~~~~l~~g~~dg~i~i~d~~--------~~~~~~~~~~h~~~i~~v~~~~~~~~l~s 295 (394)
.....+. ..+.|..+ .+.+ ++.+++..+..|.++...+. .|.....+... +.+-.+........++.
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEE
Confidence 0011111 12345544 3332 25678889999999998763 22222233333 44444444445556778
Q ss_pred EeCCCcEEEEeCCCCCc-------ce--eccCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC-------CeEEEEe-
Q 016187 296 GSMDQKLIIWDLQHSLP-------RS--TCDHEDGVTCLMWLGTSK-YVVTGCVDGKVRVWDSLS-------GDCVRTF- 357 (394)
Q Consensus 296 ~s~dg~i~iwd~~~~~~-------~~--~~~~~~~v~~~~~~~~~~-~l~sg~~dg~i~iwd~~~-------~~~~~~~- 357 (394)
.+..|.+..+....-.. .. .....+.|..+...+++. .|+..+..|..+.-++.. ++-+..+
T Consensus 161 ~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e~~~~~Rg~kGv~~~~ 240 (323)
T 1wp5_A 161 VTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILR 240 (323)
T ss_dssp EETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSC
T ss_pred EeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHHccccCCCCCCEECee
Confidence 88899988887532110 01 112334566665555555 788889999988876532 2222222
Q ss_pred --ecccCceeEEEEccCCCEEEEEeCCCcEEEEeccCC
Q 016187 358 --SGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIADF 393 (394)
Q Consensus 358 --~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~~ 393 (394)
+.....+..+....+...++..+..|.+..+.+.+.
T Consensus 241 ~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~i 278 (323)
T 1wp5_A 241 ELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGDI 278 (323)
T ss_dssp CCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGGS
T ss_pred ecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhhc
Confidence 222224543333334455667777887766676553
No 373
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=55.59 E-value=54 Score=31.03 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=40.7
Q ss_pred cEEEEEEcCCCCcEEEEecC-----------CCeEEEEEcCCCeeeEeecCc-ccCEEEEEEcCCCCEEEEEe
Q 016187 66 EVYSVACSPTDATLVATGGG-----------DDKGFFWRINQGDWASEIQGH-KDSVSSLAFSMDGQLLASGG 126 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~-----------d~~v~~w~~~~~~~~~~~~~h-~~~V~~v~~s~~g~~l~t~s 126 (394)
.-..|.|.+.+..+|+|=+. ...++..+..++++...+.+. ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 45678899865544545221 124555666677776666554 35689999999999887663
No 374
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=55.43 E-value=21 Score=34.82 Aligned_cols=37 Identities=22% Similarity=0.220 Sum_probs=29.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 016187 109 SVSSLAFSMDGQLLASGGLDGLVQIWDPSSGNLKCTLEG 147 (394)
Q Consensus 109 ~V~~v~~s~~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 147 (394)
.|.++.+ +..+|+|-+.|.++|+|++.++.++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666555 367999999999999999999998776554
No 375
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=54.31 E-value=1.6e+02 Score=28.66 Aligned_cols=228 Identities=10% Similarity=0.050 Sum_probs=108.9
Q ss_pred EcCCCCEEEEe----c-CCCeEEEEeCCccceeee-ec--ccCc-----CeEEEEECCCCCeEEEE----------eCCC
Q 016187 157 WHPRGHIVLAG----S-EDSTVWMWNADRAAYLNM-FS--GHGS-----SVTCGDFTPDGKTICTG----------SDDA 213 (394)
Q Consensus 157 ~~~~~~~l~~~----s-~d~~i~iw~~~~~~~~~~-~~--~h~~-----~v~~~~~~~~~~~l~s~----------~~dg 213 (394)
++|++++++.+ + .-..++++|+.+++.+.. +. ...+ ....++|..+...+++. +...
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~ 216 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPN 216 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCC
Confidence 67777755432 2 224789999998876532 11 0010 11223565333333321 1235
Q ss_pred cEEEEcCCCCc--eEEEEcCCCCcccCeEEEEEcCCCCE-----EEEEeCC---CcEEEEECCC--CcEEEEeccCCCCE
Q 016187 214 TLRVWNPKSGE--NIHVIRGHPYHTEGLTCLTISADSTL-----ALSGSKD---GSVHMVNITT--GKVVSSLVSHTDSI 281 (394)
Q Consensus 214 ~i~vwd~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~-----l~~g~~d---g~i~i~d~~~--~~~~~~~~~h~~~i 281 (394)
.|+.|.+-+.. ....+.+.. ..-......++++++ +++.+.+ ..+.+.++.. ++ +..+.......
T Consensus 217 ~v~~~~~Gt~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~ 293 (711)
T 4hvt_A 217 SLYIWKRGESIEKAKKLFEVPK--EYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPSDAT 293 (711)
T ss_dssp EEEEEETTSCGGGCEEEEECCT--TSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCTTCE
T ss_pred EEEEEECCCChHHCeEEeccCC--CceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCCcce
Confidence 68888775542 222333321 122334556666662 4443322 3456666543 33 23332222211
Q ss_pred EEEEECCCCCeEEEE----------eCCCcEEEEeCCCCC--------cceeccCC--CCEEEEEEeCCCCEEEEEeCCC
Q 016187 282 ECIGFSRSSPWAATG----------SMDQKLIIWDLQHSL--------PRSTCDHE--DGVTCLMWLGTSKYVVTGCVDG 341 (394)
Q Consensus 282 ~~v~~~~~~~~l~s~----------s~dg~i~iwd~~~~~--------~~~~~~~~--~~v~~~~~~~~~~~l~sg~~dg 341 (394)
+..+..+.+++.. ...++|...++.... ......+. ..+..+.|..+ ..+++...++
T Consensus 294 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~ 370 (711)
T 4hvt_A 294 --LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNV 370 (711)
T ss_dssp --EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETT
T ss_pred --EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECC
Confidence 1223344443322 245678888876531 11122232 34667777765 5677777777
Q ss_pred e--EEEEECCCCe-EEEE-eecc-cCceeEEEEccCCC-EEEEEeC---CCcEEEEec
Q 016187 342 K--VRVWDSLSGD-CVRT-FSGH-RDAIQAISVSAHQD-FLVSVSL---DGTARVFEI 390 (394)
Q Consensus 342 ~--i~iwd~~~~~-~~~~-~~~h-~~~v~~l~~~~~~~-~l~s~s~---dg~i~iw~~ 390 (394)
. |++++..+++ .++. +.-- .+.|..+.+++++. ++++.+. -+.+..+++
T Consensus 371 ~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 371 VAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp EEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 5 6777766664 2333 2211 23465556666654 4444443 244544443
No 376
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=54.18 E-value=1.7e+02 Score=28.87 Aligned_cols=148 Identities=17% Similarity=0.248 Sum_probs=73.3
Q ss_pred CCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeecC------cccCEEEEEEcCCC-CEEEEEeCCCc----EE
Q 016187 64 SDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQG------HKDSVSSLAFSMDG-QLLASGGLDGL----VQ 132 (394)
Q Consensus 64 ~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~~------h~~~V~~v~~s~~g-~~l~t~s~d~~----i~ 132 (394)
...|.+|+++|.+..++..++..+.++..+=....+...... ....|.+|+++|.. ..++.+..... -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 458999999997655554556666655444222334432221 13469999999853 34444432211 33
Q ss_pred EEeC-CCCceEEEEecC--------C-CCEEEEEEcCCC-CEEEEecCCCeEEEEeCCccceeeeec------ccCcCeE
Q 016187 133 IWDP-SSGNLKCTLEGP--------G-GGVEWVSWHPRG-HIVLAGSEDSTVWMWNADRAAYLNMFS------GHGSSVT 195 (394)
Q Consensus 133 vwd~-~~~~~~~~~~~~--------~-~~v~~~~~~~~~-~~l~~~s~d~~i~iw~~~~~~~~~~~~------~h~~~v~ 195 (394)
||-. ..|+.-..+... . ..+..++++|.. ..++.+...+.|+. ..+.++.-+.+. .....+.
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~~ 172 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGYT 172 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCEE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCeE
Confidence 4433 334322222111 0 124567888753 45555554444322 222222111111 1124577
Q ss_pred EEEECC-CCCeEEEEeCC
Q 016187 196 CGDFTP-DGKTICTGSDD 212 (394)
Q Consensus 196 ~~~~~~-~~~~l~s~~~d 212 (394)
.+.+.| ++..++.+..+
T Consensus 173 ~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 173 SVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEECTTSTTCEEEEESS
T ss_pred EEEECCCCCCEEEEEEcC
Confidence 888888 44566666554
No 377
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=53.99 E-value=1.2e+02 Score=26.87 Aligned_cols=234 Identities=11% Similarity=0.038 Sum_probs=122.9
Q ss_pred cCCCCEEEEecCCCeEEEEeCCcc-------ceeeee-cccCcCeEEEEECCCCCeEEEEeCCCcEEE---EcCCCCc--
Q 016187 158 HPRGHIVLAGSEDSTVWMWNADRA-------AYLNMF-SGHGSSVTCGDFTPDGKTICTGSDDATLRV---WNPKSGE-- 224 (394)
Q Consensus 158 ~~~~~~l~~~s~d~~i~iw~~~~~-------~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~v---wd~~~~~-- 224 (394)
-|+..++++.+.+|.|+--.+..- +-+..+ ......+..+........|+..+..|.+.- |++....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 356778888999999987544211 111111 112445555555555566766777776543 4443221
Q ss_pred --eEEEEcCCC-CcccCeEEEEEc---CCCCEEEEEeCCCcEEEEECCC-------CcEEEEeccCCCCEEEEEECCCCC
Q 016187 225 --NIHVIRGHP-YHTEGLTCLTIS---ADSTLALSGSKDGSVHMVNITT-------GKVVSSLVSHTDSIECIGFSRSSP 291 (394)
Q Consensus 225 --~~~~~~~~~-~~~~~i~~~~~~---~~~~~l~~g~~dg~i~i~d~~~-------~~~~~~~~~h~~~i~~v~~~~~~~ 291 (394)
-.......+ ...+.|..+..- .++.+++..+..|.++...+.. |.....+.. .+.+-.+.......
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Confidence 011111101 123445554432 2456899999999999887532 222223333 33444444444555
Q ss_pred eEEEEeCCCcEEEEeCCCCCc-------ce--eccCCCCEEEEEEeC---------------------------------
Q 016187 292 WAATGSMDQKLIIWDLQHSLP-------RS--TCDHEDGVTCLMWLG--------------------------------- 329 (394)
Q Consensus 292 ~l~s~s~dg~i~iwd~~~~~~-------~~--~~~~~~~v~~~~~~~--------------------------------- 329 (394)
.++..+..|.+..++...-.. .. .......|.++...+
T Consensus 163 ~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~ 242 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVAD 242 (370)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-------------------------------
T ss_pred eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccccc
Confidence 677788888888887532110 00 112334555555444
Q ss_pred --CCCEEEEEeCCCeEEEEECCC-------CeEEEE--eecccCceeEEEEccCCCEEEEEeCCCcEEEEeccC
Q 016187 330 --TSKYVVTGCVDGKVRVWDSLS-------GDCVRT--FSGHRDAIQAISVSAHQDFLVSVSLDGTARVFEIAD 392 (394)
Q Consensus 330 --~~~~l~sg~~dg~i~iwd~~~-------~~~~~~--~~~h~~~v~~l~~~~~~~~l~s~s~dg~i~iw~~~~ 392 (394)
...+|++.+..|..+...+.. ++=+.. +..-.+.+-.+....+...++..+..|.+.-..+.+
T Consensus 243 ~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 243 NGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVMLISDGGTLVRTRGSE 316 (370)
T ss_dssp ----CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEETTCCEEEEEGGG
T ss_pred ccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEEEEcCCCeEEEeeHhh
Confidence 446889999999998887532 222222 222234454443334445555667777666555543
No 378
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.43 E-value=75 Score=30.09 Aligned_cols=60 Identities=23% Similarity=0.386 Sum_probs=43.7
Q ss_pred cCEEEEEEcCCCCEEEEEeC------------CCcEEEEeCCCCceEEEEecCC-CCEEEEEEcCCCCEEEEe
Q 016187 108 DSVSSLAFSMDGQLLASGGL------------DGLVQIWDPSSGNLKCTLEGPG-GGVEWVSWHPRGHIVLAG 167 (394)
Q Consensus 108 ~~V~~v~~s~~g~~l~t~s~------------d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~ 167 (394)
.....|.|+++|.+.+.-.. ...|..++..++++...+..+. ..++.++|+|+++.|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 45678999999988773321 1257777888888777666553 468999999999977664
No 379
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=51.96 E-value=1e+02 Score=25.56 Aligned_cols=141 Identities=13% Similarity=0.061 Sum_probs=75.3
Q ss_pred EEEEeCCCcEEEEECCCCcE-EEEeccCCCCEEEEEECCCCCeEEEEeCCCcEEEEeCC---CCCc--c-----eeccCC
Q 016187 251 ALSGSKDGSVHMVNITTGKV-VSSLVSHTDSIECIGFSRSSPWAATGSMDQKLIIWDLQ---HSLP--R-----STCDHE 319 (394)
Q Consensus 251 l~~g~~dg~i~i~d~~~~~~-~~~~~~h~~~i~~v~~~~~~~~l~s~s~dg~i~iwd~~---~~~~--~-----~~~~~~ 319 (394)
+++.+.+|.|+--....-.. ...+... +.+..+........++..+..|.+.-+... .... . ......
T Consensus 5 ~v~lT~~G~iKr~~~~~~~~~~~~lke~-D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~ 83 (256)
T 1zvt_A 5 TIVLSQMGWVRSAKGHDIDAPGLNYKAG-DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPG 83 (256)
T ss_dssp EEEEETTSEEEEEESSCCCSTTSCCCTT-CCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTT
T ss_pred EEEEeCCCEEEEeeCCcCCceeccCCCC-CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCC
Confidence 44556666665544322100 0012222 333333333334455566677776555432 1110 0 012234
Q ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECC-------CCeEEEEeecccCceeEEEEc-cCCCEEEEEeCCCcEEEEecc
Q 016187 320 DGVTCLMWLGTSKYVVTGCVDGKVRVWDSL-------SGDCVRTFSGHRDAIQAISVS-AHQDFLVSVSLDGTARVFEIA 391 (394)
Q Consensus 320 ~~v~~~~~~~~~~~l~sg~~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~l~~~-~~~~~l~s~s~dg~i~iw~~~ 391 (394)
..|.++....+..+|+.++..|.++...+. .|...-.++. .+.+-.+... .+...|+..+.+|.+..|.+.
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 456666444566788899999999998752 2333334443 2345454454 345678889999998888876
Q ss_pred CC
Q 016187 392 DF 393 (394)
Q Consensus 392 ~~ 393 (394)
+.
T Consensus 163 ei 164 (256)
T 1zvt_A 163 DL 164 (256)
T ss_dssp GS
T ss_pred HC
Confidence 54
No 380
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=34.51 E-value=3.3e+02 Score=26.48 Aligned_cols=234 Identities=9% Similarity=0.117 Sum_probs=114.7
Q ss_pred EEEEE-EcCCCCEEEEE-eCC----CcEEEEeCCCCceEE-EEe-cCCC------CEEEEEEcCCCCEEEEe--------
Q 016187 110 VSSLA-FSMDGQLLASG-GLD----GLVQIWDPSSGNLKC-TLE-GPGG------GVEWVSWHPRGHIVLAG-------- 167 (394)
Q Consensus 110 V~~v~-~s~~g~~l~t~-s~d----~~i~vwd~~~~~~~~-~~~-~~~~------~v~~~~~~~~~~~l~~~-------- 167 (394)
...+. ++|++++++.+ |.. ..++++|+.+++.+. .+. .... ....++|..++.++++.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 34555 89999987654 332 378999999987652 111 0001 01234666444444431
Q ss_pred --cCCCeEEEEeCCccc--eeeeecccCcCe-EEEEECCCCCe-----EEEEeCC---CcEEEEcCCCC-ceEEEEcCCC
Q 016187 168 --SEDSTVWMWNADRAA--YLNMFSGHGSSV-TCGDFTPDGKT-----ICTGSDD---ATLRVWNPKSG-ENIHVIRGHP 233 (394)
Q Consensus 168 --s~d~~i~iw~~~~~~--~~~~~~~h~~~v-~~~~~~~~~~~-----l~s~~~d---g~i~vwd~~~~-~~~~~~~~~~ 233 (394)
.....++.|.+.+.. -...+.+....+ .....++++++ +++.+.+ ..+.+.+.... ..+..+.. +
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 289 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINM-P 289 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCS-C
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeec-C
Confidence 112468888876542 122333333332 34455666663 4444322 33455554421 12222221 1
Q ss_pred CcccCeEEEEEcCCCCEEEEE----------eCCCcEEEEECCCC-------cEEEEeccC--CCCEEEEEECCCCCeEE
Q 016187 234 YHTEGLTCLTISADSTLALSG----------SKDGSVHMVNITTG-------KVVSSLVSH--TDSIECIGFSRSSPWAA 294 (394)
Q Consensus 234 ~~~~~i~~~~~~~~~~~l~~g----------~~dg~i~i~d~~~~-------~~~~~~~~h--~~~i~~v~~~~~~~~l~ 294 (394)
.. . .+.....+.+++.. ...+.|...++.++ .....+..+ ...+..+.+..+ .+++
T Consensus 290 --~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 290 --SD-A-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp --TT-C-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEE
T ss_pred --Cc-c-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEE
Confidence 11 1 12223455554422 24678888887653 112222222 345778888876 4666
Q ss_pred EEeCCCc--EEEEeCCCCC--cce-e-ccCCCCEEEEEEeCCCC-EEEEEeC---CCeEEEEECC
Q 016187 295 TGSMDQK--LIIWDLQHSL--PRS-T-CDHEDGVTCLMWLGTSK-YVVTGCV---DGKVRVWDSL 349 (394)
Q Consensus 295 s~s~dg~--i~iwd~~~~~--~~~-~-~~~~~~v~~~~~~~~~~-~l~sg~~---dg~i~iwd~~ 349 (394)
+...++. +.++++.... ... . ......+......+++. ++++.+. -+.++.+|..
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 6666764 5666654331 221 1 11123455555556654 4444332 3568888876
No 381
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.41 E-value=4.6e+02 Score=25.50 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=31.6
Q ss_pred cEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEeec--C----cccCEEEEEEcCC
Q 016187 66 EVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASEIQ--G----HKDSVSSLAFSMD 118 (394)
Q Consensus 66 ~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~~~--~----h~~~V~~v~~s~~ 118 (394)
.|..|+++|.+..++..+...+.++.++-....+..... + ....|.+|+++|.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~ 82 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPV 82 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCC
Confidence 788999999765444445545555444433334444322 1 1246999999984
No 382
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=25.92 E-value=2.8e+02 Score=22.84 Aligned_cols=144 Identities=9% Similarity=0.041 Sum_probs=72.4
Q ss_pred EEEEecCCCeEEEEeCCcccee-eeecccCcCeEEEEECCCCCeEEEEeCCCcEEEE---cCCCCceE-EEE-cCCCC-c
Q 016187 163 IVLAGSEDSTVWMWNADRAAYL-NMFSGHGSSVTCGDFTPDGKTICTGSDDATLRVW---NPKSGENI-HVI-RGHPY-H 235 (394)
Q Consensus 163 ~l~~~s~d~~i~iw~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~vw---d~~~~~~~-~~~-~~~~~-~ 235 (394)
.+++.+.+|.|+--........ ..+. ..+.+..+........|+..+..|.+.-. ++..++.. ..+ ..... .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lk-e~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYK-AGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCC-TTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 3445566666654443221100 0112 12333333333334456666677775443 44222110 000 01111 2
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCcEEEEECC-------CCcEEEEeccCCCCEEEEEEC-CCCCeEEEEeCCCcEEEEeC
Q 016187 236 TEGLTCLTISADSTLALSGSKDGSVHMVNIT-------TGKVVSSLVSHTDSIECIGFS-RSSPWAATGSMDQKLIIWDL 307 (394)
Q Consensus 236 ~~~i~~~~~~~~~~~l~~g~~dg~i~i~d~~-------~~~~~~~~~~h~~~i~~v~~~-~~~~~l~s~s~dg~i~iwd~ 307 (394)
.+.|..+....++.+++..+..|.++...+. .+.....+... +.+-.+... .....++..+..|.+..+.+
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 3456666443456678888999999988763 23333344332 344333344 34557888889999988876
Q ss_pred C
Q 016187 308 Q 308 (394)
Q Consensus 308 ~ 308 (394)
.
T Consensus 162 ~ 162 (256)
T 1zvt_A 162 S 162 (256)
T ss_dssp G
T ss_pred H
Confidence 4
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=25.91 E-value=1.6e+02 Score=27.26 Aligned_cols=66 Identities=14% Similarity=0.182 Sum_probs=43.5
Q ss_pred eEEEEEcCC----C--CEEEEEeCCCcEEEEECCCC-c-------EEEEecc--CCCCEEEEEECCCCCeEEEEeCCCcE
Q 016187 239 LTCLTISAD----S--TLALSGSKDGSVHMVNITTG-K-------VVSSLVS--HTDSIECIGFSRSSPWAATGSMDQKL 302 (394)
Q Consensus 239 i~~~~~~~~----~--~~l~~g~~dg~i~i~d~~~~-~-------~~~~~~~--h~~~i~~v~~~~~~~~l~s~s~dg~i 302 (394)
.+.++...- + ..++.|+.+|.|+-.-+... . .+..+.. ...+|..|.++++..+|..++..+.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 466655421 3 46778999998876554322 1 2233332 35789999999999999999988766
Q ss_pred EE
Q 016187 303 II 304 (394)
Q Consensus 303 ~i 304 (394)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 384
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=24.00 E-value=67 Score=25.09 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=31.6
Q ss_pred ccCCcEEEEEEcCCCCcEEEEecCCCeEEEEEcCCCeeeEe
Q 016187 62 GHSDEVYSVACSPTDATLVATGGGDDKGFFWRINQGDWASE 102 (394)
Q Consensus 62 ~h~~~v~~~~~~p~~~~~lasg~~d~~v~~w~~~~~~~~~~ 102 (394)
.+...+.++.|...+.+-+++...++++.++|.+-|++...
T Consensus 116 ~g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~v~ 156 (188)
T 1ukf_A 116 SGRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQSS 156 (188)
T ss_dssp TTCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEEEE
T ss_pred CCCceEEEEEecCCCceeEEeccCCCeEEEeCCCCceeecc
Confidence 44666777888775567788888899999999998886543
No 385
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=23.70 E-value=2.4e+02 Score=26.04 Aligned_cols=56 Identities=21% Similarity=0.172 Sum_probs=37.7
Q ss_pred CEEEEEeCCCeEEEEECC-CC-------eEEEEeec--ccCceeEEEEccCCCEEEEEeCCCcEEE
Q 016187 332 KYVVTGCVDGKVRVWDSL-SG-------DCVRTFSG--HRDAIQAISVSAHQDFLVSVSLDGTARV 387 (394)
Q Consensus 332 ~~l~sg~~dg~i~iwd~~-~~-------~~~~~~~~--h~~~v~~l~~~~~~~~l~s~s~dg~i~i 387 (394)
..++.|+.+|.|+=.-+. .+ ..+.++.- ...+|..|.++++..+|..++..+.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 357788999986443222 21 12334432 3578999999999999999998886664
No 386
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=23.26 E-value=2.7e+02 Score=26.85 Aligned_cols=56 Identities=21% Similarity=0.210 Sum_probs=37.4
Q ss_pred CEEEEEeCCCeEE-EEECCCCe-------EEEEee--cccCceeEEEEccCCCEEEEEeCCCcEEE
Q 016187 332 KYVVTGCVDGKVR-VWDSLSGD-------CVRTFS--GHRDAIQAISVSAHQDFLVSVSLDGTARV 387 (394)
Q Consensus 332 ~~l~sg~~dg~i~-iwd~~~~~-------~~~~~~--~h~~~v~~l~~~~~~~~l~s~s~dg~i~i 387 (394)
..++.|+.+|.|. +.....+. .+.++. ....+|..|.++++.++|..++..+.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 3577889999874 33221111 233332 34678999999999999999998887665
No 387
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=22.25 E-value=2.7e+02 Score=26.39 Aligned_cols=56 Identities=9% Similarity=0.069 Sum_probs=38.8
Q ss_pred CEEEEEeCCCcEEEEECCC-C----c-EEEEec--cCCCCEEEEEECCCCCeEEEEeCCCcEEE
Q 016187 249 TLALSGSKDGSVHMVNITT-G----K-VVSSLV--SHTDSIECIGFSRSSPWAATGSMDQKLII 304 (394)
Q Consensus 249 ~~l~~g~~dg~i~i~d~~~-~----~-~~~~~~--~h~~~i~~v~~~~~~~~l~s~s~dg~i~i 304 (394)
..++.|+.+|.|+-.-+.. + . .+..+. ....+|..+.++++...|..++..+.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4777899999987554432 2 1 233332 24568899999999999988887776665
Done!