BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016195
(393 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42784|CTPA_SYNP2 Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2
Length = 414
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 170/288 (59%), Gaps = 13/288 (4%)
Query: 94 RQVVAKTNEGIVEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIKR 153
R + + ++ +AW+ V+ +++D + QNW R+ L ++TR +A+ +
Sbjct: 26 RAIAFTDEQDLLLQAWRYVSQAYVD---ETFNHQNWWLIRQKFLKRPLKTRDEAYEAVGE 82
Query: 154 MLASLGDPYTRFLSPAEFSKM---ARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAH 210
MLA L DPYTR L P ++ + ++SG+G+ + P+ + L+V+ + PA
Sbjct: 83 MLALLDDPYTRLLRPEQYRSLKVSTSGELSGVGLQINVNPEVD---VLEVILPLPGSPAE 139
Query: 211 SAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLV 270
+AG+ D++LA++G+D R E ++ ++G + V++ VK + +++V R +
Sbjct: 140 AAGIEAKDQILAIDGIDTRNIGLEEAAARMRGKKGSTVSLTVKSPKTDTVRTVKVTRDTI 199
Query: 271 ARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGG 330
A PV+ +L+ NG VGY+RL +F+A A+ +++ ++ +LQ GA ++LDLR+N GG
Sbjct: 200 ALNPVYDKLDE-KNGE-KVGYIRLNQFSANAKTEIIKSLNQLQKQGADRYVLDLRNNPGG 257
Query: 331 LVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVC 378
L+QAGIEIA+L+L++ ETI YTV R ++ + A PL AP++V
Sbjct: 258 LLQAGIEIARLWLDQ-ETIVYTVNRQGIFE-SYSAVGQPLTDAPLVVL 303
>sp|Q55669|CTPA_SYNY3 Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ctpA PE=3 SV=1
Length = 427
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 168/289 (58%), Gaps = 12/289 (4%)
Query: 93 PRQVVAKTNEGIVEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIK 152
P + + ++ ++W++VN S+LD + QNW RE + ++ R + + I+
Sbjct: 27 PSALAFTEEQKLLLQSWRLVNQSYLD---ETFNHQNWWLLREKYVKRPLRNREETYTAIE 83
Query: 153 RMLASLGDPYTRFLSPAEFSKM---ARYDMSGIGINLREVPDANGVVTLKVLGLILDGPA 209
MLA+L +P+TR L P ++ + ++SG+G+ + P+ N L+++ + PA
Sbjct: 84 EMLATLDEPFTRLLRPEQYGNLQVTTTGELSGVGLQININPETN---QLEIMAPLAGSPA 140
Query: 210 HSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQL 269
AG++ D++LA++GVD + S E ++ ++GP T V++E+ + + RQL
Sbjct: 141 EEAGLQPHDQILAIDGVDTQTLSLDEAAARMRGPKNTKVSLEILSAGTEVPQEFTLTRQL 200
Query: 270 VARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLG 329
++ +PV +L+ G SVGY+RL +F+A A K++ A+ +L++ GA +ILDLR+N G
Sbjct: 201 ISLSPVAAQLDDSRPGQ-SVGYIRLSQFSANAYKEVAHALHQLEEQGADGYILDLRNNPG 259
Query: 330 GLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVC 378
GL+QAGI+IA+L+L E TI YTV R Q++ A+ P++V
Sbjct: 260 GLLQAGIDIARLWLPES-TIVYTVNRQGT-QESFTANGEAATDRPLVVL 306
>sp|O04073|CTPA_SCEOB C-terminal processing peptidase, chloroplastic OS=Scenedesmus
obliquus GN=ctpA PE=1 SV=1
Length = 464
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 128/255 (50%), Gaps = 16/255 (6%)
Query: 107 EAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSS-IQTRSKAHGIIKRMLASLGDPYTRF 165
EAW+ V+ +++D + Q+W + RE L + R++ + I+++LA L DP+TRF
Sbjct: 87 EAWRAVDRAYVD---KSFNGQSWFKLRETYLKKEPMDRRAQTYDAIRKLLAVLDDPFTRF 143
Query: 166 LSPAEFSKMARYDMSGI-GINLREVPDANGVVTLKVLGLILDGPAHSAGVRQGDEVLAVN 224
L P+ + + R + G+ L D + VL GPA AG R GD ++ V+
Sbjct: 144 LEPSRLAALRRGTAGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVD 203
Query: 225 GVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGP--IESIQVQRQLVARTPVFY----- 277
G V+G S ++VS LLQG +++ V + V H P ++Q+ RQ V PV +
Sbjct: 204 GTAVKGLSLYDVSDLLQGEADSQVEV-VLHAPGAPSNTRTLQLTRQKVTINPVTFTTCSN 262
Query: 278 ---RLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQA 334
+GY+RL FN+ A L G + +LD+R+N GGL A
Sbjct: 263 VAAAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVLDIRNNGGGLFPA 322
Query: 335 GIEIAKLFLNEGETI 349
G+ +A++ ++ G+ +
Sbjct: 323 GVNVARMLVDRGDLV 337
>sp|O34666|CTPA_BACSU Carboxy-terminal processing protease CtpA OS=Bacillus subtilis
(strain 168) GN=ctpA PE=2 SV=1
Length = 466
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 120/233 (51%), Gaps = 15/233 (6%)
Query: 149 GIIKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLIL 205
G IK M+ SL DPY+ ++ + F + GIG + E D ++ + G
Sbjct: 70 GAIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEGIGAQVEE-KDGEILIVSPIKG--- 125
Query: 206 DGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQV 265
PA AG++ D+++ VNG V+G + E +L++G T V +E+ G I+ + +
Sbjct: 126 -SPAEKAGIKPRDQIIKVNGKSVKGMNVNEAVALIRGKKGTKVKLELNRAGVGNID-LSI 183
Query: 266 QRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLR 325
+R + V+ ++ DN ++G +++ F+ K+L A+ L+ GA +ILDLR
Sbjct: 184 KRDTIPVETVYSEMK--DN---NIGEIQITSFSETTAKELTDAIDSLEKKGAKGYILDLR 238
Query: 326 DNLGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKTIVADNSPLVTAPVIVC 378
N GGL++ I ++ LF+++G+ I ++ ++ + A+ VT P +V
Sbjct: 239 GNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGS-KEVMKAEKERKVTKPTVVL 290
>sp|Q8CSK8|CTPAL_STAES Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1113 PE=3 SV=1
Length = 491
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 17/216 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +++ E F++ D GIG +++ + + V + D
Sbjct: 99 IDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEMQKKNEQ-----ISVTSPMKDS 153
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG++ D V VN V GK +V +++G T+VT+ +K G+ + I+++R
Sbjct: 154 PAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQE--KDIKIKR 211
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ V Y + +VG + + +F + +L +A+ + G + ILDLR+N
Sbjct: 212 DTIHVKSVEYEKK------GNVGVLTINKFQSNTSGELKSAIIKAHKQGIRHIILDLRNN 265
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKT 362
GGL+ +++A +F+++G T+ G+D + KT
Sbjct: 266 PGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKT 301
>sp|Q5HPB7|CTPAL_STAEQ Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0996 PE=3 SV=1
Length = 491
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 17/216 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +++ E F++ D GIG +++ + + V + D
Sbjct: 99 IDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEMQKKNEQ-----ISVTSPMKDS 153
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG++ D V VN V GK +V +++G T+VT+ +K G+ + I+++R
Sbjct: 154 PAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGSQE--KDIKIKR 211
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ V Y + +VG + + +F + +L +A+ + G + ILDLR+N
Sbjct: 212 DTIHVKSVEYEKK------GNVGVLTINKFQSNTSGELKSAIIKAHKQGIRHIILDLRNN 265
Query: 328 LGGLVQAGIEIAKLFLNEGETIT-YTVGRDPQYQKT 362
GGL+ +++A +F+++G T+ G+D + KT
Sbjct: 266 PGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKT 301
>sp|Q44879|CTPA_BARBK Carboxy-terminal-processing protease OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ctpA PE=3 SV=1
Length = 434
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 22/213 (10%)
Query: 151 IKRMLASLGDPYTRFLSPAEFSKM---ARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I ML SL DP++ ++ + M + + G+GI EV N ++ KV+ I D
Sbjct: 65 INGMLLSL-DPHSSYMDAEKAKDMRDSTKGEFGGLGI---EVTMENNLI--KVVSPIDDT 118
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEV-KHGNCGPIESIQVQ 266
PA AGV GD + ++G + G++ E ++GP+ T +T+ + + G P++ I++
Sbjct: 119 PAAKAGVLAGDFISKIDGKQISGQTLNEAVDQMRGPAGTPITLTINRFGVDKPLD-IKIV 177
Query: 267 RQLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDM----GASYFIL 322
R ++ V YR+E +GY+RL +F DL A+K +Q ++L
Sbjct: 178 RDIIKVKAVKYRVEG------DIGYLRLIQFTEKTFSDLQAAIKDIQSKIPTDKLKGYVL 231
Query: 323 DLRDNLGGLVQAGIEIAKLFLNEGETITYTVGR 355
DLR N GGL+ I + FLN+GE ++ T GR
Sbjct: 232 DLRLNPGGLLDQAISVTDAFLNKGEIVS-TRGR 263
>sp|Q6GGY8|CTPAL_STAAR Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1432 PE=3 SV=1
Length = 496
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 37/248 (14%)
Query: 105 VEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIKRMLASLGDPYTR 164
+E ++I+N + ++++ D LS + I M+ L DPY+
Sbjct: 79 IENVYKILNSDY------------YKKQNSDKLSKAA---------IDGMVKELKDPYSE 117
Query: 165 FLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAHSAGVRQGDEVL 221
+L+ + F++ D GIG +++ D + V + PA AG+R D +
Sbjct: 118 YLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGSPAERAGIRPKDVIT 172
Query: 222 AVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLVARTPVFYRLEH 281
VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R+ + V Y+ +
Sbjct: 173 KVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKREKIHVKSVEYKKK- 229
Query: 282 LDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQAGIEIAKL 341
VG + + +F +L A+ + G +LDLR+N GGL+ +++A +
Sbjct: 230 -----GKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANI 284
Query: 342 FLNEGETI 349
F+++G+T+
Sbjct: 285 FIDKGKTV 292
>sp|Q2YXZ9|CTPAL_STAAB Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB1275c PE=3 SV=1
Length = 496
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 119/248 (47%), Gaps = 37/248 (14%)
Query: 105 VEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIKRMLASLGDPYTR 164
+E ++I+N + ++++ D LS + I M+ L DPY+
Sbjct: 79 IENVYKILNSDY------------YKKQSSDKLSKAA---------IDGMVKELKDPYSE 117
Query: 165 FLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAHSAGVRQGDEVL 221
+L+ + F++ D GIG +++ D + V + PA AG+R D +
Sbjct: 118 YLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGSPAERAGIRPKDVIT 172
Query: 222 AVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLVARTPVFYRLEH 281
VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R+ + V Y+ +
Sbjct: 173 KVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKREKIHVKSVEYKKKG 230
Query: 282 LDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQAGIEIAKL 341
VG + + +F +L A+ + G +LDLR+N GGL+ +++A +
Sbjct: 231 ------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANI 284
Query: 342 FLNEGETI 349
F+++G+T+
Sbjct: 285 FIDKGKTV 292
>sp|Q5HG01|CTPAL_STAAC Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
COL) GN=SACOL1455 PE=3 SV=1
Length = 496
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVEYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETI 349
GGL+ +++A +F+++G+T+
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTV 292
>sp|Q8NWR2|CTPAL_STAAW Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MW2) GN=MW1310 PE=3 SV=1
Length = 496
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVEYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETI 349
GGL+ +++A +F+++G+T+
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTV 292
>sp|Q6G9E1|CTPAL_STAAS Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1363 PE=3 SV=1
Length = 496
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVEYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETI 349
GGL+ +++A +F+++G+T+
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTV 292
>sp|Q7A5M9|CTPAL_STAAN Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
N315) GN=SA1253 PE=1 SV=1
Length = 496
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVDYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETI 349
GGL+ +++A +F+++G+T+
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTV 292
>sp|Q99U67|CTPAL_STAAM Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1420 PE=3 SV=1
Length = 496
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +L+ + F++ D GIG +++ D + V +
Sbjct: 104 IDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ-----IMVTSPMKGS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG+R D + VNG ++GK+ EV ++G T VT+ V+ G+ + ++++R
Sbjct: 159 PAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGS--EEKDVKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ + V Y+ + VG + + +F +L A+ + G +LDLR+N
Sbjct: 217 EKIHVKSVDYKKKG------KVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETI 349
GGL+ +++A +F+++G+T+
Sbjct: 271 PGGLLDEAVKMANIFIDKGKTV 292
>sp|Q49XN1|CTPAL_STAS1 Probable CtpA-like serine protease OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1319 PE=3 SV=1
Length = 491
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +++ E F++ D GIG +++ + +++ +
Sbjct: 99 IDGMVKKLDDPYSDYMTKKETKSFNEDVSGDFVGIGAEMQKKGNQ-----IQITSPMKQS 153
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG++ D V VNG ++G+ + ++G T VT+ ++ G G I ++R
Sbjct: 154 PAEKAGIQPKDVVTKVNGKSIKGQPLEAIVKKVRGKQGTKVTLTIERG--GQAHDITIKR 211
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ V Y+ +H D VG + +F +L +A+ + G +LDLR+N
Sbjct: 212 DKIHVKSVEYQ-KHGD-----VGVFTINKFQNSTSGELKSAIIKAHKDGIRKIVLDLRNN 265
Query: 328 LGGLVQAGIEIAKLFLNEGETI 349
GGL+ +++A +F+++ ET+
Sbjct: 266 PGGLLDEAVKMANIFIDKNETV 287
>sp|Q4L6D0|CTPAL_STAHJ Probable CtpA-like serine protease OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1486 PE=3 SV=2
Length = 496
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 151 IKRMLASLGDPYTRFLSPAE---FSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDG 207
I M+ L DPY+ +++ E F++ D GIG +++ D ++T + D
Sbjct: 104 IDGMVKELKDPYSEYMTKDETKSFNEDVSGDFVGIGAEMQK-KDKQIMIT----SPMKDS 158
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQR 267
PA AG++ D V V+G V GK +V L++G T V + +K G+ + I+++R
Sbjct: 159 PAEKAGIQPKDVVTKVDGKSVVGKPLDQVVKLVRGKEGTTVKLTIKRGSQE--KEIKIKR 216
Query: 268 QLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDN 327
+ V Y+ + DN +G + +F +L +A+ + G +LDLR+N
Sbjct: 217 GKIHVKSVEYKKK--DN----IGVFTINKFQDNTAGELKSAIIKAHKDGVRSIVLDLRNN 270
Query: 328 LGGLVQAGIEIAKLFLNEGETI 349
GGL+ +++A +F+++ +T+
Sbjct: 271 PGGLLDEAVKMANIFIDKDQTV 292
>sp|O35002|CTPB_BACSU Carboxy-terminal processing protease CtpB OS=Bacillus subtilis
(strain 168) GN=ctpB PE=1 SV=1
Length = 480
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 115/244 (47%), Gaps = 31/244 (12%)
Query: 105 VEEAWQIVNDSFLDTGRHRWTPQNWQRKREDILSSSIQTRSKAHGIIKRMLASLGDPYTR 164
+E+A++++++ +++ + RE +L +IQ ML++L DPY+
Sbjct: 55 IEKAYELISNEYVE-----------KVDREKLLEGAIQG----------MLSTLNDPYSV 93
Query: 165 FL---SPAEFSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPAHSAGVRQGDEVL 221
++ + +FS GIG EV +G + ++ PA AG++ DE++
Sbjct: 94 YMDKQTAKQFSDSLDSSFEGIGA---EVGMEDGKII--IVSPFKKSPAEKAGLKPNDEII 148
Query: 222 AVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIESIQVQRQLVARTPVFYRLEH 281
++NG + GK ++G + V+++++ S +++R + VF +
Sbjct: 149 SINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKK 208
Query: 282 LDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLGGLVQAGIEIAKL 341
+ SVGY+ + F+ +D A++ L+ ++D+R N GG +Q+ EI K
Sbjct: 209 VQG--HSVGYIAISTFSEHTAEDFAKALRELEKKEIEGLVIDVRGNPGGYLQSVEEILKH 266
Query: 342 FLNE 345
F+ +
Sbjct: 267 FVTK 270
>sp|P23865|PRC_ECOLI Tail-specific protease OS=Escherichia coli (strain K12) GN=prc PE=1
SV=2
Length = 682
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 15/197 (7%)
Query: 160 DPYTRFLSP---AEFSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPA-HSAGVR 215
DP+T +LSP +F+ + GIG L ++ D V+ V G GPA S +
Sbjct: 223 DPHTNYLSPRNTEQFNTEMSLSLEGIGAVL-QMDDDYTVINSMVAG----GPAAKSKAIS 277
Query: 216 QGDEVLAVNG-----VDVRGKSAFEVSSLLQGPSETFVTIEV-KHGNCGPIESIQVQRQL 269
GD+++ V VDV G +V +L++GP + V +E+ G ++ + R+
Sbjct: 278 VGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTRER 337
Query: 270 VARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLG 329
+ ++ G VG + + F D+ +++L+ S I+DLR N G
Sbjct: 338 IRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDLRSNGG 397
Query: 330 GLVQAGIEIAKLFLNEG 346
G + + ++ LF+ G
Sbjct: 398 GALTEAVSLSGLFIPAG 414
>sp|P45306|PRC_HAEIN Tail-specific protease OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=prc PE=3 SV=1
Length = 695
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 85 GEDAAESEPRQVVAKTNEGIVEEAW--QIVNDSF-LDTGRHRWTPQNWQRKREDILSSSI 141
G+D E + + A E + W ++ ND L +W+ + + L+
Sbjct: 150 GQDQIEIDREKAAAPQTEADANKLWDARVKNDIINLKLKDKKWSEIKAKLTKRYNLAIRR 209
Query: 142 QTRSKAHGIIKRMLASLG---DPYTRFLSP---AEFSKMARYDMSGIGINLREVPDANGV 195
T++KA I++ L + DP+T +LSP F++ + GIG L+ D
Sbjct: 210 LTQTKADDIVQIYLNAFAREIDPHTSYLSPRTAKSFNESINLSLEGIGTTLQSEDD---- 265
Query: 196 VTLKVLGLILDGPAH-SAGVRQGDEVLAVNGV-----DVRGKSAFEVSSLLQGPSETFVT 249
+ + L+ PA S + GD+++ V DV G ++ ++G T V
Sbjct: 266 -EISIKSLVPGAPAERSKKLHPGDKIIGVGQATGDIEDVVGWRLEDLVEKIKGKKGTKVR 324
Query: 250 IEVKHGNCGPIESIQVQRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAM 309
+E++ G I + R V +L ++ +++ F +D+ +
Sbjct: 325 LEIEPAKGGKSRIITLVRDKVRIEDQAAKLTFEKVSGKNIAVIKIPSFYIGLTEDVKKLL 384
Query: 310 KRLQDMGASYFILDLRDNLGGLVQAGIEIAKLFLNEG 346
+L++ A I+DLR+N GG + + ++ LF+ +G
Sbjct: 385 VKLENQKAEALIVDLRENGGGALTEAVALSGLFITDG 421
>sp|P43669|PRC_SALTY Tail-specific protease OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=prc PE=3 SV=2
Length = 682
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Query: 160 DPYTRFLSP---AEFSKMARYDMSGIGINLREVPDANGVVTLKVLGLILDGPA-HSAGVR 215
DP+T +LSP +F+ + GIG L ++ D V+ L+ GPA S +
Sbjct: 223 DPHTNYLSPRNTEQFNTEMSLSLEGIGAVL-QMDDDYTVIN----SLVAGGPAAKSKSIS 277
Query: 216 QGDEVLAVNG-----VDVRGKSAFEVSSLLQGPSETFVTIEV-KHGNCGPIESIQVQRQL 269
GD ++ V VDV G +V +L++GP + V +E+ G I + R+
Sbjct: 278 VGDRIVGVGQAGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRIITLTRER 337
Query: 270 VARTPVFYRLEHLDNGTTSVGYMRLKEFNALARKDLVTAMKRLQDMGASYFILDLRDNLG 329
+ ++ G VG + + F D+ +++L+ + ++DLR N G
Sbjct: 338 IRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVNSIVIDLRSNGG 397
Query: 330 GLVQAGIEIAKLFLNEG 346
G + + ++ LF+ G
Sbjct: 398 GALTEAVSLSGLFIPSG 414
>sp|Q5PYH7|DLG2_DANRE Disks large homolog 2 OS=Danio rerio GN=dlg2 PE=2 SV=1
Length = 881
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNG+D+RG + + ++
Sbjct: 432 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELRRGDQILSVNGIDLRGATHEQAAA 488
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 489 ALKGAGQTVTII 500
>sp|Q15700|DLG2_HUMAN Disks large homolog 2 OS=Homo sapiens GN=DLG2 PE=1 SV=3
Length = 870
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +++GD++L+VNG+D+RG S + ++
Sbjct: 429 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELQRGDQILSVNGIDLRGASHEQAAA 485
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 486 ALKGAGQTVTII 497
>sp|Q63622|DLG2_RAT Disks large homolog 2 OS=Rattus norvegicus GN=Dlg2 PE=1 SV=1
Length = 852
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +++GD++L+VNG+D+RG S + ++
Sbjct: 429 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELQRGDQILSVNGIDLRGASHEQAAA 485
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 486 ALKGAGQTVTII 497
>sp|Q91XM9|DLG2_MOUSE Disks large homolog 2 OS=Mus musculus GN=Dlg2 PE=1 SV=2
Length = 852
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +++GD++L+VNG+D+RG S + ++
Sbjct: 429 TGLGFNIVGGEDGEGIFVSFILA---GGPADLSGELQRGDQILSVNGIDLRGASHEQAAA 485
Query: 239 LLQGPSETFVTI 250
L+G +T I
Sbjct: 486 ALKGAGQTVTII 497
>sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo sapiens GN=ARHGAP23 PE=1
SV=2
Length = 1491
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 197 TLKVLGLILDGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
T+ V + DGPAH AG+R GD ++ VNG V GK+ +V +L+Q +T
Sbjct: 97 TIFVKNVKEDGPAHRAGLRTGDRLVKVNGESVIGKTYSQVIALIQNSDDTL 147
>sp|Q8K4V4|SNX27_RAT Sorting nexin-27 OS=Rattus norvegicus GN=Snx27 PE=1 SV=2
Length = 539
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 180 SGIGINLR-------EVPDANGVVTL---KVLGLILDGPAHSAGVRQGDEVLAVNGVDVR 229
SG G N+R ++ NG + V ++ G A AGVR+GD +L VNGV+V
Sbjct: 49 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVE 108
Query: 230 GKSAFEVSSLLQ-GPSETFVTI 250
G + +V L++ G E +T+
Sbjct: 109 GATHKQVVDLIRAGEKELILTV 130
>sp|A5PKA5|SNX27_BOVIN Sorting nexin-27 OS=Bos taurus GN=SNX27 PE=2 SV=1
Length = 541
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 180 SGIGINLR-------EVPDANGVVTL---KVLGLILDGPAHSAGVRQGDEVLAVNGVDVR 229
SG G N+R ++ NG + V ++ G A AGVR+GD +L VNGV+V
Sbjct: 51 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVE 110
Query: 230 GKSAFEVSSLLQ-GPSETFVTI 250
G + +V L++ G E +T+
Sbjct: 111 GATHKQVVDLIRAGEKELILTV 132
>sp|Q3UHD6|SNX27_MOUSE Sorting nexin-27 OS=Mus musculus GN=Snx27 PE=1 SV=2
Length = 539
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 180 SGIGINLR-------EVPDANGVVTL---KVLGLILDGPAHSAGVRQGDEVLAVNGVDVR 229
SG G N+R ++ NG + V ++ G A AGVR+GD +L VNGV+V
Sbjct: 49 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVE 108
Query: 230 GKSAFEVSSLLQ-GPSETFVTI 250
G + +V L++ G E +T+
Sbjct: 109 GATHKQVVDLIRAGEKELILTV 130
>sp|Q62108|DLG4_MOUSE Disks large homolog 4 OS=Mus musculus GN=Dlg4 PE=1 SV=1
Length = 724
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNGVD+R S + +
Sbjct: 321 TGLGFNIVGGEDGEGIFISFILA---GGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 377
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 378 ALKNAGQTVTII 389
>sp|P78352|DLG4_HUMAN Disks large homolog 4 OS=Homo sapiens GN=DLG4 PE=1 SV=3
Length = 724
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNGVD+R S + +
Sbjct: 321 TGLGFNIVGGEDGEGIFISFILA---GGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 377
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 378 ALKNAGQTVTII 389
>sp|P31016|DLG4_RAT Disks large homolog 4 OS=Rattus norvegicus GN=Dlg4 PE=1 SV=1
Length = 724
Score = 40.4 bits (93), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA +G +R+GD++L+VNGVD+R S + +
Sbjct: 321 TGLGFNIVGGEDGEGIFISFILA---GGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 377
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 378 ALKNAGQTVTII 389
>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus musculus GN=Arhgap23 PE=1
SV=2
Length = 1483
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+R GD ++ VNG + GK+ +V L+Q +T
Sbjct: 107 GPAHRAGLRTGDRLVKVNGESIIGKTYSQVIGLIQNSDDTL 147
>sp|Q5PYH5|DLG1L_DANRE Discs large homolog 1-like protein OS=Danio rerio GN=dlg1l PE=2
SV=1
Length = 827
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA G +R+GD +++VNG+D+RG + + ++
Sbjct: 411 TGLGFNIVGGEDGEGIFISFILA---GGPADLCGELRKGDRLVSVNGIDLRGATHEQAAA 467
Query: 239 LLQGPSETFVTI 250
L+ +T VTI
Sbjct: 468 ALKNAGQT-VTI 478
>sp|Q6R005|DLG4_DANRE Disks large homolog 4 OS=Danio rerio GN=dlg4 PE=2 SV=1
Length = 801
Score = 38.5 bits (88), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAH--SAGVRQGDEVLAVNGVDVRGKSAFEVS 237
+G+G N+ D G+ + IL G A S +R+GD++L+VNGVD+R + + +
Sbjct: 401 TGLGFNIVGGEDGEGIF----ISFILAGGAADLSGELRKGDQILSVNGVDLRHATHEQAA 456
Query: 238 SLLQGPSETFVTI 250
+ L+ +T I
Sbjct: 457 AALKNAGQTVTII 469
>sp|Q5PYH6|DLG1_DANRE Disks large homolog 1 OS=Danio rerio GN=dlg1 PE=2 SV=2
Length = 873
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRGKSAFEVSS 238
+G+G N+ D G+ +L GPA G +R+GD +++VNGVD+R + + ++
Sbjct: 482 TGLGFNIVGGEDGEGIFISFILA---GGPADLCGELRKGDRIVSVNGVDLRSATHEQAAA 538
Query: 239 LLQGPSETFVTI 250
L+ +T I
Sbjct: 539 ALKNAGQTVTII 550
>sp|Q6ZM86|GRD2I_DANRE Delphilin OS=Danio rerio GN=grid2ip PE=3 SV=1
Length = 1009
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQG 242
PA + G++ GD +L +NG+D+R S +V S+LQG
Sbjct: 124 SPAEACGLKTGDRILFLNGLDMRNCSHEKVVSMLQG 159
>sp|A2RUV4|RHG21_XENTR Rho GTPase-activating protein 21 OS=Xenopus tropicalis GN=arhgap21
PE=2 SV=1
Length = 1935
Score = 38.5 bits (88), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+ GD ++ VNG V GK+ +V +L+Q T
Sbjct: 115 GPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTL 155
>sp|Q71M21|RH21B_XENLA Rho GTPase-activating protein 21-B OS=Xenopus laevis GN=arhgap21-b
PE=2 SV=1
Length = 1902
Score = 38.5 bits (88), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+ GD ++ VNG V GK+ +V +L+Q T
Sbjct: 114 GPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTL 154
>sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus laevis GN=arhgap21-a
PE=2 SV=1
Length = 1926
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 207 GPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETF 247
GPAH AG+ GD ++ VNG V GK+ +V +L+Q T
Sbjct: 114 GPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTL 154
>sp|Q3MHQ0|USH1C_BOVIN Harmonin OS=Bos taurus GN=USH1C PE=2 SV=1
Length = 551
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 203 LILDGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNCGPIES 262
LI DG A S G++ GDE++ +NG + + EV +L++ ++ V+I+V+H P++S
Sbjct: 117 LIKDGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIR--TKKTVSIKVRHIGLIPVKS 174
>sp|Q96L92|SNX27_HUMAN Sorting nexin-27 OS=Homo sapiens GN=SNX27 PE=1 SV=2
Length = 541
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 180 SGIGINLR-------EVPDANGVVTL---KVLGLILDGPAHSAGVRQGDEVLAVNGVDVR 229
SG G N+R ++ NG + V ++ G A AGVR+GD +L VN V+V
Sbjct: 51 SGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNHVNVE 110
Query: 230 GKSAFEVSSLLQ-GPSETFVTI 250
G + +V L++ G E +T+
Sbjct: 111 GATHKQVVDLIRAGEKELILTV 132
>sp|Q6AYQ0|MAGIX_RAT PDZ domain-containing protein MAGIX OS=Rattus norvegicus GN=Magix
PE=2 SV=1
Length = 326
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 180 SGIGINLREVPDANGVVTLKVLGLILDGPAHSAG-VRQGDEVLAVNGVDVRG 230
+G G+ L + +G V L V GL+ DGPA G ++ GD VL +NG RG
Sbjct: 136 AGFGLTLSGGRNVSGNVPLAVCGLLKDGPAQRCGHLQAGDLVLYINGQSTRG 187
>sp|O60759|CYTIP_HUMAN Cytohesin-interacting protein OS=Homo sapiens GN=CYTIP PE=1 SV=2
Length = 359
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 206 DGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHGNC----GPIE 261
D PAH AG++ GD + +NGV G + +V L++ S +TIE +G +E
Sbjct: 117 DSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRS-SGNLLTIETLNGTMILKRTELE 175
Query: 262 S-IQVQRQLVARTPVFYR 278
+ +QV +Q + + V YR
Sbjct: 176 AKLQVLKQTLKQKWVEYR 193
>sp|Q8N3R9|MPP5_HUMAN MAGUK p55 subfamily member 5 OS=Homo sapiens GN=MPP5 PE=1 SV=3
Length = 675
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 203 LILDGPAHSAGV-RQGDEVLAVNGVDVRGKSAFEVSSLLQG--PSETFVTIEVKHGNCGP 259
++ G A +G+ +GDEVL +NG+++RGK EV LL + TFV I + P
Sbjct: 283 IVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPP 342
Query: 260 IESIQVQRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFN-ALARKDLVTAMKRLQDMGAS 318
A+ V + H D + Y+ +E + + D++ + +
Sbjct: 343 -----------AKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQ 391
Query: 319 YFILDLRDN--LGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKT 362
+ DN L GLV K F + E + T+ D + +K+
Sbjct: 392 AYREGDEDNQPLAGLVP-----GKSFQQQREAMKQTIEEDKEPEKS 432
>sp|Q5RDQ2|MPP5_PONAB MAGUK p55 subfamily member 5 OS=Pongo abelii GN=MPP5 PE=2 SV=1
Length = 675
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 203 LILDGPAHSAGV-RQGDEVLAVNGVDVRGKSAFEVSSLL 240
++ G A +G+ +GDEVL +NG+++RGK EV LL
Sbjct: 283 IVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLL 321
>sp|Q9JLB2|MPP5_MOUSE MAGUK p55 subfamily member 5 OS=Mus musculus GN=Mpp5 PE=1 SV=1
Length = 675
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 22/166 (13%)
Query: 203 LILDGPAHSAGV-RQGDEVLAVNGVDVRGKSAFEVSSLLQG--PSETFVTIEVKHGNCGP 259
++ G A +G+ +GDEVL +NG+++RGK EV LL + TFV I + P
Sbjct: 283 IVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPP 342
Query: 260 IESIQVQRQLVARTPVFYRLEHLDNGTTSVGYMRLKEFN-ALARKDLVTAMKRLQDMGAS 318
A+ V + H D + Y+ +E + + D++ + +
Sbjct: 343 -----------AKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQ 391
Query: 319 YFILDLRDN--LGGLVQAGIEIAKLFLNEGETITYTVGRDPQYQKT 362
+ DN L GLV K F + E + T+ D + +K+
Sbjct: 392 AYREGDEDNQPLAGLVP-----GKSFQQQREAMKQTIEEDKEPEKS 432
>sp|Q0QWG9|GRD2I_MOUSE Delphilin OS=Mus musculus GN=Grid2ip PE=1 SV=1
Length = 1203
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHG 255
PA +A ++ GD +L +NG+D+R S +V S+LQG S T+ V+ G
Sbjct: 298 PAENASLKSGDRILFLNGLDMRNCSHDKVVSMLQG-SGAMPTLVVEEG 344
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 206 DGPAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQG 242
+GPA AGVR GD++L VNGV ++G E L+G
Sbjct: 766 EGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG 802
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 194 GVVTLKVLGLILDGPAHSAGVRQGDEVLAVNGVDVRGKSAFE-VSSLLQ 241
GV KVL L A +G+R GD +LAVNG DVR + E VS+LL+
Sbjct: 1035 GVFISKVLPRGL---AARSGLRVGDRILAVNGQDVRDATHQEAVSALLR 1080
>sp|Q9NB04|PATJ_DROME Patj homolog OS=Drosophila melanogaster GN=Patj PE=1 SV=2
Length = 871
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 172 SKMARYDMSGIGINLREVPDANGVVTLK----VLGLILDGPAHSAGV-RQGDEVLAVNGV 226
+++ ++ + G+GI+L D G ++ + ++ DGP GV R GDE+L VNG
Sbjct: 560 AQIKKFAVGGLGISLEGTVDVEGGREVRPHHYIRSILPDGPVGVNGVLRSGDELLEVNGE 619
Query: 227 DVRGKSAFEVSSLLQ 241
+ G + EV ++L+
Sbjct: 620 RLLGMNHLEVVAILK 634
>sp|A4D2P6|GRD2I_HUMAN Delphilin OS=Homo sapiens GN=GRID2IP PE=2 SV=2
Length = 1211
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 208 PAHSAGVRQGDEVLAVNGVDVRGKSAFEVSSLLQGPSETFVTIEVKHG 255
PA +A ++ GD +L +NG+D+R S +V S+LQG S T+ V+ G
Sbjct: 309 PADNAALKSGDRILFLNGLDMRNCSHDKVVSMLQG-SGAMPTLVVEEG 355
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,900,003
Number of Sequences: 539616
Number of extensions: 5921462
Number of successful extensions: 19118
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 18841
Number of HSP's gapped (non-prelim): 374
length of query: 393
length of database: 191,569,459
effective HSP length: 119
effective length of query: 274
effective length of database: 127,355,155
effective search space: 34895312470
effective search space used: 34895312470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)